Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71767.t1 | XP_013470132.1 | 97.5 | 517 | 13 | 0 | 1 | 517 | 1 | 517 | 1.80E-283 | 984.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71767.t1 | Q9ZU50 | 74.8 | 504 | 127 | 0 | 15 | 518 | 13 | 516 | 3.5e-219 | 762.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71767.t1 | A0A072W1K2 | 97.5 | 517 | 13 | 0 | 1 | 517 | 1 | 517 | 1.3e-283 | 984.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055229 | MS.gene71767 | 0.810385 | 1.18E-50 | -1.69E-46 |
| MS.gene056677 | MS.gene71767 | 0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene71767 | -0.802479 | 5.50E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71767.t1 | MTR_1g109390 | 97.485 | 517 | 13 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1006 |
| MS.gene71767.t1 | MTR_1g109380 | 82.946 | 516 | 88 | 0 | 2 | 517 | 4 | 519 | 0.0 | 820 |
| MS.gene71767.t1 | MTR_3g096760 | 43.137 | 510 | 287 | 3 | 12 | 518 | 14 | 523 | 8.35e-148 | 434 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71767.t1 | AT2G01170 | 74.219 | 512 | 128 | 1 | 11 | 518 | 5 | 516 | 0.0 | 742 |
| MS.gene71767.t1 | AT2G01170 | 74.600 | 437 | 111 | 0 | 82 | 518 | 1 | 437 | 0.0 | 638 |
Find 131 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCATTTCAATGCTGAAAA+TGG | 0.120421 | 1.1:-78017033 | MS.gene71767:CDS |
| TTGGGTGGGTTGCAGTTATT+TGG | 0.130170 | 1.1:-78015373 | MS.gene71767:CDS |
| ATGCTCTTCCTATCTTCTTT+AGG | 0.137560 | 1.1:-78015460 | MS.gene71767:CDS |
| TGCTCTTCCTATCTTCTTTA+GGG | 0.181767 | 1.1:-78015459 | MS.gene71767:CDS |
| TAGGACAACTCGGTGCTATT+TGG | 0.210031 | 1.1:-78017401 | MS.gene71767:CDS |
| TCCTGCAGGTTCAATATTAT+TGG | 0.221841 | 1.1:-78017746 | MS.gene71767:intron |
| AGTGGTAGGCATTGGTTTAA+AGG | 0.236278 | 1.1:-78015227 | MS.gene71767:CDS |
| AGAAAGCCAAACTGCATATA+TGG | 0.249645 | 1.1:+78016178 | None:intergenic |
| CTTCTGGTGGTCTTTACTAT+TGG | 0.264481 | 1.1:-78018414 | MS.gene71767:CDS |
| CCATTTGGAGCCAGCAAGTT+TGG | 0.265589 | 1.1:+78018387 | None:intergenic |
| CAACCATATTGCATGGAAAC+TGG | 0.270152 | 1.1:+78018505 | None:intergenic |
| TCATTCTTATACTTTCTTAC+TGG | 0.273160 | 1.1:-78015256 | MS.gene71767:CDS |
| ATATCTGTGTTATCGTTCTT+AGG | 0.280658 | 1.1:-78017420 | MS.gene71767:CDS |
| TTCACTTGCACAACTCATTC+AGG | 0.300329 | 1.1:-78017562 | MS.gene71767:CDS |
| ACCAGTGAGCACTGATATAA+TGG | 0.320125 | 1.1:+78018567 | None:intergenic |
| TGGGTGGGTTGCAGTTATTT+GGG | 0.320753 | 1.1:-78015372 | MS.gene71767:CDS |
| TACAACACTGGGTTGAACTA+TGG | 0.331024 | 1.1:-78018532 | MS.gene71767:CDS |
| CAAGTATTCAAGACAAGATA+TGG | 0.331153 | 1.1:-78016451 | MS.gene71767:CDS |
| GGTGCTATTTGGAATGTTCT+TGG | 0.337295 | 1.1:-78017390 | MS.gene71767:intron |
| TATTGGAGTGCCAAACTTGC+TGG | 0.338649 | 1.1:-78018397 | MS.gene71767:CDS |
| TTATGCCACAAAGATGAAAA+TGG | 0.338784 | 1.1:+78016221 | None:intergenic |
| CTCATTTCAATGCTGAAAAT+GGG | 0.349503 | 1.1:-78017032 | MS.gene71767:CDS |
| ACAAGATATGGAAATGGAAT+TGG | 0.349622 | 1.1:-78016439 | MS.gene71767:CDS |
| CCTTTCAACTTAGGTCGTTA+TGG | 0.349948 | 1.1:-78015404 | MS.gene71767:CDS |
| TTAAGTGTCTCAATGGTTAT+TGG | 0.357490 | 1.1:+78015308 | None:intergenic |
| CATGCTTGTTGCACTTTCAA+TGG | 0.367637 | 1.1:-78018461 | MS.gene71767:CDS |
| ATGAGTCAGTATACACTTAC+TGG | 0.367911 | 1.1:-78016964 | MS.gene71767:CDS |
| GGAGGCAAAAGGTGCCCATT+TGG | 0.371177 | 1.1:+78018372 | None:intergenic |
| AATTGGAGGTATTATTTGCT+TGG | 0.378629 | 1.1:-78016422 | MS.gene71767:CDS |
| GGTCGTTATGGAATCATTGT+TGG | 0.385555 | 1.1:-78015392 | MS.gene71767:CDS |
| CTATGATGCATCAGCTCATA+TGG | 0.388958 | 1.1:-78016941 | MS.gene71767:intron |
| GTTCCAGGGCCTTTCAACTT+AGG | 0.389541 | 1.1:-78015413 | MS.gene71767:CDS |
| AAGAACGATAACACAGATAT+AGG | 0.395217 | 1.1:+78017423 | None:intergenic |
| TAAGTGTCTCAATGGTTATT+GGG | 0.395882 | 1.1:+78015309 | None:intergenic |
| ATGGTTATTGGGTAGGAAAC+AGG | 0.398746 | 1.1:+78015320 | None:intergenic |
| TTGCCTCCTGGATTACTGGC+TGG | 0.402686 | 1.1:-78018357 | MS.gene71767:intron |
| GTTGGGATATCTATTATTGT+AGG | 0.403649 | 1.1:-78016577 | MS.gene71767:CDS |
| CTATATATGCTGCAGTCTCT+TGG | 0.409187 | 1.1:-78015542 | MS.gene71767:intron |
| ATCAAGCATCCAAGTGCAAC+AGG | 0.411743 | 1.1:+78015278 | None:intergenic |
| GGCCCAGTTTCCATGCAATA+TGG | 0.413200 | 1.1:-78018508 | MS.gene71767:CDS |
| CCAAACTTGCTGGCTCCAAA+TGG | 0.415092 | 1.1:-78018387 | MS.gene71767:CDS |
| CAGACCCTACATGTTTCTCT+TGG | 0.426132 | 1.1:-78016995 | MS.gene71767:CDS |
| GGATATCTATTATTGTAGGA+TGG | 0.426717 | 1.1:-78016573 | MS.gene71767:CDS |
| ATTGGAGGTATTATTTGCTT+GGG | 0.431920 | 1.1:-78016421 | MS.gene71767:CDS |
| GTAGGATGGGGTTACATAAT+CGG | 0.434195 | 1.1:-78016559 | MS.gene71767:CDS |
| GTCGTTATGGAATCATTGTT+GGG | 0.435062 | 1.1:-78015391 | MS.gene71767:CDS |
| GAAAGCCAAACTGCATATAT+GGG | 0.438844 | 1.1:+78016179 | None:intergenic |
| CTTTCTTACTGGATACTTAG+TGG | 0.444827 | 1.1:-78015245 | MS.gene71767:CDS |
| TTCAAGACAAGATATGGAAA+TGG | 0.446793 | 1.1:-78016445 | MS.gene71767:CDS |
| GCTTATGCTTTCTCGAGAGA+TGG | 0.447869 | 1.1:-78016251 | MS.gene71767:CDS |
| CTTATGCTTTCTCGAGAGAT+GGG | 0.448769 | 1.1:-78016250 | MS.gene71767:CDS |
| ATGTCCCCATATATGCAGTT+TGG | 0.455483 | 1.1:-78016184 | MS.gene71767:CDS |
| CATAACCGTCTTCTTCAACT+TGG | 0.459598 | 1.1:-78018735 | MS.gene71767:CDS |
| GATATCTATTATTGTAGGAT+GGG | 0.462631 | 1.1:-78016572 | MS.gene71767:CDS |
| ACAACTTCAGCTTTCTAAGT+TGG | 0.465433 | 1.1:+78015196 | None:intergenic |
| AGGAAACTAAAGGTGCTGAT+AGG | 0.471291 | 1.1:-78016627 | MS.gene71767:CDS |
| AACTACACACCTGTTGCACT+TGG | 0.471603 | 1.1:-78015287 | MS.gene71767:CDS |
| GCCCTTTCCGTTGCAACAGA+TGG | 0.473197 | 1.1:+78017075 | None:intergenic |
| CAGGTTCAATATTATTGGCC+TGG | 0.473674 | 1.1:-78017741 | MS.gene71767:intron |
| AAAGGAATTATAAGCGCTGT+TGG | 0.474948 | 1.1:-78016595 | MS.gene71767:CDS |
| TATCTTCTTTAGGGTGACCT+TGG | 0.475721 | 1.1:-78015450 | MS.gene71767:CDS |
| CGATAAAATACATACCGTTA+AGG | 0.480671 | 1.1:+78016133 | None:intergenic |
| GTCATCATTCTCCTTAGTAC+TGG | 0.482918 | 1.1:-78017540 | MS.gene71767:CDS |
| GTATAGTTACCTTGATATGC+TGG | 0.484772 | 1.1:+78016354 | None:intergenic |
| GCTGATAGGAATGGATCAAA+AGG | 0.487524 | 1.1:-78016613 | MS.gene71767:CDS |
| AGGAAACAGGTAATGAGAAT+AGG | 0.488340 | 1.1:+78015333 | None:intergenic |
| CAAACTTGCTGGCTCCAAAT+GGG | 0.490542 | 1.1:-78018386 | MS.gene71767:CDS |
| AGACCCTACATGTTTCTCTT+GGG | 0.491573 | 1.1:-78016994 | MS.gene71767:CDS |
| CCATTGGTAACAACATGAGC+TGG | 0.492929 | 1.1:+78018780 | None:intergenic |
| ATCACCACACTTTACAACAC+TGG | 0.495762 | 1.1:-78018544 | MS.gene71767:CDS |
| CGACCTAAGTTGAAAGGCCC+TGG | 0.497114 | 1.1:+78015410 | None:intergenic |
| TTCCATCTGTTGCAACGGAA+AGG | 0.497256 | 1.1:-78017077 | MS.gene71767:CDS |
| CTTACTGGATACTTAGTGGT+AGG | 0.497833 | 1.1:-78015241 | MS.gene71767:CDS |
| ATCATTCTCCTTAGTACTGG+TGG | 0.501098 | 1.1:-78017537 | MS.gene71767:CDS |
| AGAATACCAGCCAGTAATCC+AGG | 0.503334 | 1.1:+78018351 | None:intergenic |
| TCCATCTGTTGCAACGGAAA+GGG | 0.503525 | 1.1:-78017076 | MS.gene71767:CDS |
| GTATAAGTCAATCACTGCTA+TGG | 0.509585 | 1.1:+78015490 | None:intergenic |
| CAGTTTCCATGCAATATGGT+TGG | 0.509931 | 1.1:-78018504 | MS.gene71767:CDS |
| AGATATGGAAATGGAATTGG+AGG | 0.516722 | 1.1:-78016436 | MS.gene71767:CDS |
| AAGGAATTATAAGCGCTGTT+GGG | 0.517561 | 1.1:-78016594 | MS.gene71767:CDS |
| AACCATATTGCATGGAAACT+GGG | 0.520879 | 1.1:+78018506 | None:intergenic |
| TCCATTATATCAGTGCTCAC+TGG | 0.522229 | 1.1:-78018568 | MS.gene71767:CDS |
| CCAGTAATCCAGGAGGCAAA+AGG | 0.522292 | 1.1:+78018361 | None:intergenic |
| GGATACTTAGTGGTAGGCAT+TGG | 0.527585 | 1.1:-78015235 | MS.gene71767:CDS |
| GTGGCATAAGGTTAACAAGC+AGG | 0.527675 | 1.1:-78016207 | MS.gene71767:CDS |
| GGTGATGCTTCACTCGACTC+TGG | 0.533064 | 1.1:-78018759 | MS.gene71767:CDS |
| TTATGGAATCATTGTTGGGT+GGG | 0.534431 | 1.1:-78015387 | MS.gene71767:CDS |
| TTCAATGCTGAAAATGGGGA+TGG | 0.534659 | 1.1:-78017027 | MS.gene71767:CDS |
| TTAAGTGAAAATAATGATGC+TGG | 0.535336 | 1.1:-78016502 | MS.gene71767:CDS |
| GCAGTCTCTTGGAAGTATAG+TGG | 0.536351 | 1.1:-78015531 | MS.gene71767:intron |
| TGTGTAGTTAAGTGTCTCAA+TGG | 0.537017 | 1.1:+78015301 | None:intergenic |
| GGCTGTTTATTATACCATGA+AGG | 0.537027 | 1.1:+78017448 | None:intergenic |
| GAGCAAAATTGCACCATGGA+TGG | 0.537334 | 1.1:+78017470 | None:intergenic |
| ATATCTATTATTGTAGGATG+GGG | 0.537532 | 1.1:-78016571 | MS.gene71767:CDS |
| TATGTAATTATTGCCATCCA+TGG | 0.540231 | 1.1:-78017483 | MS.gene71767:CDS |
| GTGGGTTGCAGTTATTTGGG+TGG | 0.542671 | 1.1:-78015369 | MS.gene71767:CDS |
| TAGTAAAGACCACCAGAAGT+TGG | 0.544089 | 1.1:+78018418 | None:intergenic |
| TTTCAGACAGAGGAAACTAA+AGG | 0.545295 | 1.1:-78016637 | MS.gene71767:intron |
| TGTCTCAATGGTTATTGGGT+AGG | 0.550883 | 1.1:+78015313 | None:intergenic |
| AAGTCCCAAGAGAAACATGT+AGG | 0.558291 | 1.1:+78016990 | None:intergenic |
| TCACCACACTTTACAACACT+GGG | 0.559105 | 1.1:-78018543 | MS.gene71767:CDS |
| AACAGGTAATGAGAATAGGA+TGG | 0.559808 | 1.1:+78015337 | None:intergenic |
| CCAGCTCATGTTGTTACCAA+TGG | 0.560960 | 1.1:-78018780 | MS.gene71767:CDS |
| AAGGTCACCCTAAAGAAGAT+AGG | 0.561429 | 1.1:+78015452 | None:intergenic |
| TCTCATTCCATCTGTTGCAA+CGG | 0.561893 | 1.1:-78017082 | MS.gene71767:CDS |
| GTTATGGAATCATTGTTGGG+TGG | 0.562360 | 1.1:-78015388 | MS.gene71767:CDS |
| TATAGTGGCATTTGAAGCCA+TGG | 0.567175 | 1.1:-78015516 | MS.gene71767:CDS |
| ACTAAAGGTGCTGATAGGAA+TGG | 0.572341 | 1.1:-78016622 | MS.gene71767:CDS |
| TTGATAAAATATCTCAGCAA+TGG | 0.574161 | 1.1:+78016471 | None:intergenic |
| TGTAACCAAGTTGAAGAAGA+CGG | 0.574263 | 1.1:+78018730 | None:intergenic |
| GAAATGAGTGAAAACAAACT+TGG | 0.574424 | 1.1:+78017047 | None:intergenic |
| GTCGAGTGAAGCATCACCAT+TGG | 0.580107 | 1.1:+78018764 | None:intergenic |
| AACAAAATACTTTCGTGCCA+AGG | 0.581392 | 1.1:+78015433 | None:intergenic |
| GTTCAGTTACCAGCATATCA+AGG | 0.588718 | 1.1:-78016363 | MS.gene71767:intron |
| AGTCCCAAGAGAAACATGTA+GGG | 0.588739 | 1.1:+78016991 | None:intergenic |
| CCATAACGACCTAAGTTGAA+AGG | 0.596783 | 1.1:+78015404 | None:intergenic |
| CATTGAAAGTGCAACAAGCA+TGG | 0.601531 | 1.1:+78018462 | None:intergenic |
| TTATGCTTTCTCGAGAGATG+GGG | 0.610331 | 1.1:-78016249 | MS.gene71767:CDS |
| AGGGATATCAGTAACTGCAT+AGG | 0.612626 | 1.1:+78016531 | None:intergenic |
| AACACTGGGTTGAACTATGG+TGG | 0.615396 | 1.1:-78018529 | MS.gene71767:CDS |
| ACGATAACACAGATATAGGA+AGG | 0.616634 | 1.1:+78017427 | None:intergenic |
| CATTGGTAACAACATGAGCT+GGG | 0.619994 | 1.1:+78018781 | None:intergenic |
| CCACAAAGATGAAAATGGCA+TGG | 0.625668 | 1.1:+78016226 | None:intergenic |
| TCATTTCAATGCTGAAAATG+GGG | 0.631799 | 1.1:-78017031 | MS.gene71767:CDS |
| AGTGAAAATAATGATGCTGG+TGG | 0.641753 | 1.1:-78016499 | MS.gene71767:CDS |
| TTATCGTTCTTAGGACAACT+CGG | 0.658164 | 1.1:-78017411 | MS.gene71767:CDS |
| AAAGCCAAACTGCATATATG+GGG | 0.685543 | 1.1:+78016180 | None:intergenic |
| AATCACTGCTATGGACACCA+TGG | 0.702545 | 1.1:+78015499 | None:intergenic |
| CAACCCAGTGTTGTAAAGTG+TGG | 0.703013 | 1.1:+78018540 | None:intergenic |
| GAAGGAGCAAAATTGCACCA+TGG | 0.705185 | 1.1:+78017466 | None:intergenic |
| ATACCAGCCAGTAATCCAGG+AGG | 0.763139 | 1.1:+78018354 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGTATAAAAATTTCATA+GGG | + | chr1.1:78018096-78018115 | None:intergenic | 15.0% |
| !! | TGTTTAATTGTATCATATTT+AGG | + | chr1.1:78018371-78018390 | None:intergenic | 15.0% |
| !! | AATGAAGAAAATTGTTCTTA+TGG | + | chr1.1:78015770-78015789 | None:intergenic | 20.0% |
| !! | AATTAAACAACTTAAAACTC+AGG | - | chr1.1:78018382-78018401 | MS.gene71767:CDS | 20.0% |
| !! | ATATTGGAAGTCAAAATTAA+AGG | + | chr1.1:78015336-78015355 | None:intergenic | 20.0% |
| !! | CCAATGTATAAAAATTTCAT+AGG | + | chr1.1:78018097-78018116 | None:intergenic | 20.0% |
| !! | CGTATACTATAAAAAATTAG+GGG | + | chr1.1:78015721-78015740 | None:intergenic | 20.0% |
| !! | CTGTTAGTAATTGAAAAAAA+AGG | + | chr1.1:78016853-78016872 | None:intergenic | 20.0% |
| !! | GCGTATACTATAAAAAATTA+GGG | + | chr1.1:78015722-78015741 | None:intergenic | 20.0% |
| !! | GTTTAACATAATTCTGTAAT+GGG | + | chr1.1:78018025-78018044 | None:intergenic | 20.0% |
| !! | TACAAAATAGTGTAAAATAG+TGG | + | chr1.1:78017184-78017203 | None:intergenic | 20.0% |
| !! | TGCGTATACTATAAAAAATT+AGG | + | chr1.1:78015723-78015742 | None:intergenic | 20.0% |
| !! | TGTTTAACATAATTCTGTAA+TGG | + | chr1.1:78018026-78018045 | None:intergenic | 20.0% |
| !!! | AAATTCCCTATTTTATTCTT+CGG | - | chr1.1:78016628-78016647 | MS.gene71767:CDS | 20.0% |
| !!! | ATTTTGACTTCCAATATTTT+TGG | - | chr1.1:78015339-78015358 | MS.gene71767:CDS | 20.0% |
| !!! | CATCATTATTTTCACTTAAA+AGG | + | chr1.1:78017488-78017507 | None:intergenic | 20.0% |
| !!! | CCTATGAAATTTTTATACAT+TGG | - | chr1.1:78018094-78018113 | MS.gene71767:intron | 20.0% |
| !!! | CTTTTTTTTCAATTACTAAC+AGG | - | chr1.1:78016851-78016870 | MS.gene71767:intron | 20.0% |
| !!! | GGTTTGATTTTTAAAACATT+GGG | - | chr1.1:78016820-78016839 | MS.gene71767:intron | 20.0% |
| !!! | TAAATTTTATTTCTCCACAT+AGG | + | chr1.1:78018344-78018363 | None:intergenic | 20.0% |
| !!! | TATTTTCACTTAAAAGGTAA+GGG | + | chr1.1:78017482-78017501 | None:intergenic | 20.0% |
| !!! | TGGTTTGATTTTTAAAACAT+TGG | - | chr1.1:78016819-78016838 | MS.gene71767:intron | 20.0% |
| !!! | TGTTTTTATATCATTTTGCA+TGG | - | chr1.1:78017835-78017854 | MS.gene71767:intron | 20.0% |
| !!! | TTATTTTCACTTAAAAGGTA+AGG | + | chr1.1:78017483-78017502 | None:intergenic | 20.0% |
| !!! | TTTAAGAAGTGTTTTCATAA+AGG | + | chr1.1:78017928-78017947 | None:intergenic | 20.0% |
| !!! | TTTTAAAAATCAAACCAAAC+AGG | + | chr1.1:78016816-78016835 | None:intergenic | 20.0% |
| ! | AATAATGTGTGAAAGAGATA+AGG | - | chr1.1:78018056-78018075 | MS.gene71767:intron | 25.0% |
| ! | ATATCTATTATTGTAGGATG+GGG | - | chr1.1:78017420-78017439 | MS.gene71767:CDS | 25.0% |
| ! | ATGATGGTTAAAATTTGTAC+AGG | - | chr1.1:78017714-78017733 | MS.gene71767:intron | 25.0% |
| ! | GATATCTATTATTGTAGGAT+GGG | - | chr1.1:78017419-78017438 | MS.gene71767:CDS | 25.0% |
| ! | TCATTCTTATACTTTCTTAC+TGG | - | chr1.1:78018735-78018754 | MS.gene71767:CDS | 25.0% |
| ! | TCGGAATCAAATATATTAGT+TGG | - | chr1.1:78015865-78015884 | MS.gene71767:intron | 25.0% |
| ! | TGAATCCAAACCAAAAATAT+TGG | + | chr1.1:78015352-78015371 | None:intergenic | 25.0% |
| ! | TTAAGTGAAAATAATGATGC+TGG | - | chr1.1:78017489-78017508 | MS.gene71767:CDS | 25.0% |
| ! | TTGATAAAATATCTCAGCAA+TGG | + | chr1.1:78017523-78017542 | None:intergenic | 25.0% |
| ! | TTGTATGAGAGAATAAGAAT+TGG | + | chr1.1:78018120-78018139 | None:intergenic | 25.0% |
| ! | TTTGTCCGAAGAATAAAATA+GGG | + | chr1.1:78016636-78016655 | None:intergenic | 25.0% |
| !! | AAGTGTTTTCATAAAGGAAA+TGG | + | chr1.1:78017922-78017941 | None:intergenic | 25.0% |
| !! | ATTTTGCACATTTCCAAATT+CGG | + | chr1.1:78018164-78018183 | None:intergenic | 25.0% |
| !! | CTTCTTAAATACATTTTTGC+AGG | - | chr1.1:78017939-78017958 | MS.gene71767:intron | 25.0% |
| !! | GAACAAATCACTATTTTCTA+CGG | + | chr1.1:78017123-78017142 | None:intergenic | 25.0% |
| !! | TTTTCAATTACTAACAGGAA+CGG | - | chr1.1:78016856-78016875 | MS.gene71767:intron | 25.0% |
| !! | TTTTGTCCGAAGAATAAAAT+AGG | + | chr1.1:78016637-78016656 | None:intergenic | 25.0% |
| !!! | CATTTTCGTATGATTGATTT+TGG | - | chr1.1:78015786-78015805 | MS.gene71767:intron | 25.0% |
| !!! | GTAAATAGGAAGTATTTTCT+AGG | + | chr1.1:78017321-78017340 | None:intergenic | 25.0% |
| !!! | TAGTTGGTAGTATTCTAATA+TGG | - | chr1.1:78015881-78015900 | MS.gene71767:intron | 25.0% |
| !!! | TATTTTTGGTTTGGATTCAT+TGG | - | chr1.1:78015353-78015372 | MS.gene71767:CDS | 25.0% |
| AAAAATCAAACCAAACAGGT+TGG | + | chr1.1:78016812-78016831 | None:intergenic | 30.0% | |
| AAATAATCGAACCGTTGTAA+AGG | - | chr1.1:78016761-78016780 | MS.gene71767:intron | 30.0% | |
| AAGAACGATAACACAGATAT+AGG | + | chr1.1:78016571-78016590 | None:intergenic | 30.0% | |
| AAGGAAAGTTTGCAGTAAAT+AGG | + | chr1.1:78017335-78017354 | None:intergenic | 30.0% | |
| AAGGTAAATTCATCCATTGT+GGG | + | chr1.1:78015835-78015854 | None:intergenic | 30.0% | |
| ACAAGATATGGAAATGGAAT+TGG | - | chr1.1:78017552-78017571 | MS.gene71767:CDS | 30.0% | |
| ACTCATTTCAATGCTGAAAA+TGG | - | chr1.1:78016958-78016977 | MS.gene71767:CDS | 30.0% | |
| ATAGTGTAAAATAGTGGCTA+TGG | + | chr1.1:78017178-78017197 | None:intergenic | 30.0% | |
| ATATCTGTGTTATCGTTCTT+AGG | - | chr1.1:78016571-78016590 | MS.gene71767:CDS | 30.0% | |
| ATGAGTACAAGTATGATAAG+TGG | + | chr1.1:78017976-78017995 | None:intergenic | 30.0% | |
| ATTTACCTTAAACTCGGTAT+CGG | - | chr1.1:78015846-78015865 | MS.gene71767:intron | 30.0% | |
| CAAGTATTCAAGACAAGATA+TGG | - | chr1.1:78017540-78017559 | MS.gene71767:CDS | 30.0% | |
| CAGTTGCTTCTATAAAATCA+TGG | - | chr1.1:78016026-78016045 | MS.gene71767:intron | 30.0% | |
| CCAAATTCGGTTAAACAATT+TGG | + | chr1.1:78018151-78018170 | None:intergenic | 30.0% | |
| CCAAATTGTTTAACCGAATT+TGG | - | chr1.1:78018148-78018167 | MS.gene71767:intron | 30.0% | |
| CGATAAAATACATACCGTTA+AGG | + | chr1.1:78017861-78017880 | None:intergenic | 30.0% | |
| CTCATTTCAATGCTGAAAAT+GGG | - | chr1.1:78016959-78016978 | MS.gene71767:CDS | 30.0% | |
| GAAATGAGTGAAAACAAACT+TGG | + | chr1.1:78016947-78016966 | None:intergenic | 30.0% | |
| GAAATGTGCAAAATATACGA+AGG | - | chr1.1:78018170-78018189 | MS.gene71767:intron | 30.0% | |
| GGATATCTATTATTGTAGGA+TGG | - | chr1.1:78017418-78017437 | MS.gene71767:CDS | 30.0% | |
| GGATGAATTTACCTTAAACT+CGG | - | chr1.1:78015840-78015859 | MS.gene71767:intron | 30.0% | |
| GTTGGGATATCTATTATTGT+AGG | - | chr1.1:78017414-78017433 | MS.gene71767:CDS | 30.0% | |
| TAAGGTAAATTCATCCATTG+TGG | + | chr1.1:78015836-78015855 | None:intergenic | 30.0% | |
| TAAGTGTCTCAATGGTTATT+GGG | + | chr1.1:78018685-78018704 | None:intergenic | 30.0% | |
| TATGTAATTATTGCCATCCA+TGG | - | chr1.1:78016508-78016527 | MS.gene71767:CDS | 30.0% | |
| TCATTTCAATGCTGAAAATG+GGG | - | chr1.1:78016960-78016979 | MS.gene71767:CDS | 30.0% | |
| TGAAAGAGATAAGGAATTGA+GGG | - | chr1.1:78018065-78018084 | MS.gene71767:intron | 30.0% | |
| TGGTTAAAATTTGTACAGGA+TGG | - | chr1.1:78017718-78017737 | MS.gene71767:intron | 30.0% | |
| TGTGTCAGATAAATGAATGT+AGG | + | chr1.1:78016206-78016225 | None:intergenic | 30.0% | |
| TTAAGTGTCTCAATGGTTAT+TGG | + | chr1.1:78018686-78018705 | None:intergenic | 30.0% | |
| TTATGCCACAAAGATGAAAA+TGG | + | chr1.1:78017773-78017792 | None:intergenic | 30.0% | |
| TTCAAGACAAGATATGGAAA+TGG | - | chr1.1:78017546-78017565 | MS.gene71767:CDS | 30.0% | |
| TTGCTTCTATAAAATCATGG+TGG | - | chr1.1:78016029-78016048 | MS.gene71767:intron | 30.0% | |
| TTTCAATTACTAACAGGAAC+GGG | - | chr1.1:78016857-78016876 | MS.gene71767:intron | 30.0% | |
| ! | AATACATTTTTGCAGGAACA+AGG | - | chr1.1:78017946-78017965 | MS.gene71767:intron | 30.0% |
| ! | ACAGTAGTTTGTCAAAATCA+CGG | + | chr1.1:78016059-78016078 | None:intergenic | 30.0% |
| ! | ATTTTCATCTTTGTGGCATA+AGG | - | chr1.1:78017772-78017791 | MS.gene71767:intron | 30.0% |
| ! | TCTGTTATTTACTGAAGTTG+CGG | + | chr1.1:78018240-78018259 | None:intergenic | 30.0% |
| ! | TTACAACGGTTCGATTATTT+TGG | + | chr1.1:78016761-78016780 | None:intergenic | 30.0% |
| !! | AATTGGAGGTATTATTTGCT+TGG | - | chr1.1:78017569-78017588 | MS.gene71767:CDS | 30.0% |
| !! | ATTGGAGGTATTATTTGCTT+GGG | - | chr1.1:78017570-78017589 | MS.gene71767:CDS | 30.0% |
| !!! | GACTTCCAATATTTTTGGTT+TGG | - | chr1.1:78015344-78015363 | MS.gene71767:CDS | 30.0% |
| AAAGCCAAACTGCATATATG+GGG | + | chr1.1:78017814-78017833 | None:intergenic | 35.0% | |
| AACAAAATACTTTCGTGCCA+AGG | + | chr1.1:78018561-78018580 | None:intergenic | 35.0% | |
| AACAGGTAATGAGAATAGGA+TGG | + | chr1.1:78018657-78018676 | None:intergenic | 35.0% | |
| AACCATATTGCATGGAAACT+GGG | + | chr1.1:78015488-78015507 | None:intergenic | 35.0% | |
| AAGAAGAGAATCTTTACGAG+AGG | + | chr1.1:78015306-78015325 | None:intergenic | 35.0% | |
| AATTGAACCAAACATCGAAC+TGG | - | chr1.1:78016669-78016688 | MS.gene71767:intron | 35.0% | |
| ACCCATACCACAGAAAAAAA+TGG | + | chr1.1:78017610-78017629 | None:intergenic | 35.0% | |
| ACGATAACACAGATATAGGA+AGG | + | chr1.1:78016567-78016586 | None:intergenic | 35.0% | |
| AGAAAGCCAAACTGCATATA+TGG | + | chr1.1:78017816-78017835 | None:intergenic | 35.0% | |
| AGATATGGAAATGGAATTGG+AGG | - | chr1.1:78017555-78017574 | MS.gene71767:CDS | 35.0% | |
| AGGAAACAGGTAATGAGAAT+AGG | + | chr1.1:78018661-78018680 | None:intergenic | 35.0% | |
| AGGGATACACATAGCATAAT+TGG | - | chr1.1:78018202-78018221 | MS.gene71767:intron | 35.0% | |
| AGTGAAAATAATGATGCTGG+TGG | - | chr1.1:78017492-78017511 | MS.gene71767:CDS | 35.0% | |
| AGTGTGCTTCTAATACAAGA+GGG | - | chr1.1:78017668-78017687 | MS.gene71767:intron | 35.0% | |
| ATATACGAAGGTGATGAGAA+AGG | - | chr1.1:78018182-78018201 | MS.gene71767:intron | 35.0% | |
| ATGAGTCAGTATACACTTAC+TGG | - | chr1.1:78017027-78017046 | MS.gene71767:CDS | 35.0% | |
| ATGCTCTTCCTATCTTCTTT+AGG | - | chr1.1:78018531-78018550 | MS.gene71767:CDS | 35.0% | |
| CAAAAACCAACCATATTGCA+TGG | + | chr1.1:78015496-78015515 | None:intergenic | 35.0% | |
| CACTATAAAACCGATTGTAG+AGG | - | chr1.1:78016118-78016137 | MS.gene71767:intron | 35.0% | |
| CATTGAACCAACCTTTACAA+CGG | + | chr1.1:78016775-78016794 | None:intergenic | 35.0% | |
| CTTTCTTACTGGATACTTAG+TGG | - | chr1.1:78018746-78018765 | MS.gene71767:CDS | 35.0% | |
| GAAAGCCAAACTGCATATAT+GGG | + | chr1.1:78017815-78017834 | None:intergenic | 35.0% | |
| GGCTGTTTATTATACCATGA+AGG | + | chr1.1:78016546-78016565 | None:intergenic | 35.0% | |
| GTATAAGTCAATCACTGCTA+TGG | + | chr1.1:78018504-78018523 | None:intergenic | 35.0% | |
| GTATAGTTACCTTGATATGC+TGG | + | chr1.1:78017640-78017659 | None:intergenic | 35.0% | |
| GTCGTTATGGAATCATTGTT+GGG | - | chr1.1:78018600-78018619 | MS.gene71767:intron | 35.0% | |
| GTGAAAGAGATAAGGAATTG+AGG | - | chr1.1:78018064-78018083 | MS.gene71767:intron | 35.0% | |
| TATACGAAGGTGATGAGAAA+GGG | - | chr1.1:78018183-78018202 | MS.gene71767:intron | 35.0% | |
| TCAAAGCAAACATGCACTAA+GGG | - | chr1.1:78016078-78016097 | MS.gene71767:intron | 35.0% | |
| TCATAAAGGAAATGGACACT+TGG | + | chr1.1:78017914-78017933 | None:intergenic | 35.0% | |
| TCCTGCAGGTTCAATATTAT+TGG | - | chr1.1:78016245-78016264 | MS.gene71767:CDS | 35.0% | |
| TGCTCTTCCTATCTTCTTTA+GGG | - | chr1.1:78018532-78018551 | MS.gene71767:CDS | 35.0% | |
| TGTGACTTATCAACAATACC+AGG | + | chr1.1:78016271-78016290 | None:intergenic | 35.0% | |
| TGTGTAGTTAAGTGTCTCAA+TGG | + | chr1.1:78018693-78018712 | None:intergenic | 35.0% | |
| TTAGTTTCCTCTGTCTGAAA+AGG | + | chr1.1:78017354-78017373 | None:intergenic | 35.0% | |
| TTATCGTTCTTAGGACAACT+CGG | - | chr1.1:78016580-78016599 | MS.gene71767:CDS | 35.0% | |
| TTATGGAATCATTGTTGGGT+GGG | - | chr1.1:78018604-78018623 | MS.gene71767:intron | 35.0% | |
| TTCTTATGGCAATACAGCAA+GGG | + | chr1.1:78015756-78015775 | None:intergenic | 35.0% | |
| TTGTGCACAGTTACTTATGA+TGG | - | chr1.1:78017698-78017717 | MS.gene71767:intron | 35.0% | |
| TTTCAGACAGAGGAAACTAA+AGG | - | chr1.1:78017354-78017373 | MS.gene71767:intron | 35.0% | |
| TTTGACCATGCAATGAAAAG+TGG | + | chr1.1:78016315-78016334 | None:intergenic | 35.0% | |
| ! | AAACTTTCCTTTTCAGACAG+AGG | - | chr1.1:78017344-78017363 | MS.gene71767:intron | 35.0% |
| ! | AAAGGAATTATAAGCGCTGT+TGG | - | chr1.1:78017396-78017415 | MS.gene71767:CDS | 35.0% |
| ! | AACAGGAACGGGAAATTTTT+AGG | - | chr1.1:78016868-78016887 | MS.gene71767:intron | 35.0% |
| ! | AAGGAATTATAAGCGCTGTT+GGG | - | chr1.1:78017397-78017416 | MS.gene71767:CDS | 35.0% |
| ! | ATTGCTATTGTTCTGCGATT+AGG | + | chr1.1:78017215-78017234 | None:intergenic | 35.0% |
| ! | CTGTTATTTACTGAAGTTGC+GGG | + | chr1.1:78018239-78018258 | None:intergenic | 35.0% |
| ! | TGTAACCAAGTTGAAGAAGA+CGG | + | chr1.1:78015264-78015283 | None:intergenic | 35.0% |
| !! | ATCATTTTGCATGGCCTTAA+CGG | - | chr1.1:78017844-78017863 | MS.gene71767:intron | 35.0% |
| !! | ATCTTCCACTTTTCATTGCA+TGG | - | chr1.1:78016307-78016326 | MS.gene71767:intron | 35.0% |
| !! | CTTAGTACTGGTGGAAAAAA+TGG | - | chr1.1:78016463-78016482 | MS.gene71767:CDS | 35.0% |
| !! | TCTTGCTTTTCGTTTTCAGT+GGG | - | chr1.1:78016384-78016403 | MS.gene71767:CDS | 35.0% |
| !! | TTCTTGCTTTTCGTTTTCAG+TGG | - | chr1.1:78016383-78016402 | MS.gene71767:CDS | 35.0% |
| !!! | CACGAAAGTATTTTGTTCCA+GGG | - | chr1.1:78018564-78018583 | MS.gene71767:CDS | 35.0% |
| !!! | CATGCAATATGGTTGGTTTT+TGG | - | chr1.1:78015494-78015513 | MS.gene71767:CDS | 35.0% |
| !!! | CATTTTTTCCACCAGTACTA+AGG | + | chr1.1:78016465-78016484 | None:intergenic | 35.0% |
| !!! | CATTTTTTCTCTTTTCCTGC+AGG | - | chr1.1:78016231-78016250 | MS.gene71767:CDS | 35.0% |
| !!! | GCCATTTTTTTCTGTGGTAT+GGG | - | chr1.1:78017606-78017625 | MS.gene71767:intron | 35.0% |
| !!! | TGCCATTTTTTTCTGTGGTA+TGG | - | chr1.1:78017605-78017624 | MS.gene71767:intron | 35.0% |
| AAGGTCACCCTAAAGAAGAT+AGG | + | chr1.1:78018542-78018561 | None:intergenic | 40.0% | |
| AAGTCCCAAGAGAAACATGT+AGG | + | chr1.1:78017004-78017023 | None:intergenic | 40.0% | |
| AATCGAACCGTTGTAAAGGT+TGG | - | chr1.1:78016765-78016784 | MS.gene71767:intron | 40.0% | |
| AATGGGCAACATGTACACAT+AGG | + | chr1.1:78018008-78018027 | None:intergenic | 40.0% | |
| AGACCCTACATGTTTCTCTT+GGG | - | chr1.1:78016997-78017016 | MS.gene71767:CDS | 40.0% | |
| AGGGATATCAGTAACTGCAT+AGG | + | chr1.1:78017463-78017482 | None:intergenic | 40.0% | |
| AGTCCCAAGAGAAACATGTA+GGG | + | chr1.1:78017003-78017022 | None:intergenic | 40.0% | |
| AGTTAGTGTTTGTCCCACAA+TGG | - | chr1.1:78015819-78015838 | MS.gene71767:intron | 40.0% | |
| ATCACCACACTTTACAACAC+TGG | - | chr1.1:78015447-78015466 | MS.gene71767:CDS | 40.0% | |
| ATGGTTATTGGGTAGGAAAC+AGG | + | chr1.1:78018674-78018693 | None:intergenic | 40.0% | |
| ATGTCCCCATATATGCAGTT+TGG | - | chr1.1:78017807-78017826 | MS.gene71767:intron | 40.0% | |
| ATTGCATGGTCAAACTTGTG+TGG | - | chr1.1:78016321-78016340 | MS.gene71767:intron | 40.0% | |
| ATTGCTATAGCGCAATTGCA+TGG | + | chr1.1:78017252-78017271 | None:intergenic | 40.0% | |
| ATTGTAGAGGATCAACGTGA+GGG | - | chr1.1:78016131-78016150 | MS.gene71767:intron | 40.0% | |
| CAAACATGCACTCACTCTAA+CGG | + | chr1.1:78015946-78015965 | None:intergenic | 40.0% | |
| CAACCATATTGCATGGAAAC+TGG | + | chr1.1:78015489-78015508 | None:intergenic | 40.0% | |
| CAGGTTCAATATTATTGGCC+TGG | - | chr1.1:78016250-78016269 | MS.gene71767:CDS | 40.0% | |
| CAGTGTGCTTCTAATACAAG+AGG | - | chr1.1:78017667-78017686 | MS.gene71767:intron | 40.0% | |
| CAGTTTCCATGCAATATGGT+TGG | - | chr1.1:78015487-78015506 | MS.gene71767:CDS | 40.0% | |
| CATAACCGTCTTCTTCAACT+TGG | - | chr1.1:78015256-78015275 | MS.gene71767:CDS | 40.0% | |
| CATGCACTAAGGGTGAAAAA+TGG | - | chr1.1:78016088-78016107 | MS.gene71767:intron | 40.0% | |
| CCACAAAGATGAAAATGGCA+TGG | + | chr1.1:78017768-78017787 | None:intergenic | 40.0% | |
| CCTTTCAACTTAGGTCGTTA+TGG | - | chr1.1:78018587-78018606 | MS.gene71767:CDS | 40.0% | |
| CTATATATGCTGCAGTCTCT+TGG | - | chr1.1:78018449-78018468 | MS.gene71767:CDS | 40.0% | |
| CTATGATGCATCAGCTCATA+TGG | - | chr1.1:78017050-78017069 | MS.gene71767:CDS | 40.0% | |
| CTTACTGGATACTTAGTGGT+AGG | - | chr1.1:78018750-78018769 | MS.gene71767:CDS | 40.0% | |
| CTTATGCTTTCTCGAGAGAT+GGG | - | chr1.1:78017741-78017760 | MS.gene71767:intron | 40.0% | |
| CTTCTGGTGGTCTTTACTAT+TGG | - | chr1.1:78015577-78015596 | MS.gene71767:intron | 40.0% | |
| GCCAATAATATTGAACCTGC+AGG | + | chr1.1:78016249-78016268 | None:intergenic | 40.0% | |
| GCTGATAGGAATGGATCAAA+AGG | - | chr1.1:78017378-78017397 | MS.gene71767:intron | 40.0% | |
| GGTCGTTATGGAATCATTGT+TGG | - | chr1.1:78018599-78018618 | MS.gene71767:CDS | 40.0% | |
| GTAGGATGGGGTTACATAAT+CGG | - | chr1.1:78017432-78017451 | MS.gene71767:CDS | 40.0% | |
| GTCAAAGCAAACATGCACTA+AGG | - | chr1.1:78016077-78016096 | MS.gene71767:intron | 40.0% | |
| GTCATCATTCTCCTTAGTAC+TGG | - | chr1.1:78016451-78016470 | MS.gene71767:CDS | 40.0% | |
| GTTATGGAATCATTGTTGGG+TGG | - | chr1.1:78018603-78018622 | MS.gene71767:intron | 40.0% | |
| GTTCAGTTACCAGCATATCA+AGG | - | chr1.1:78017628-78017647 | MS.gene71767:intron | 40.0% | |
| GTTCTTATGGCAATACAGCA+AGG | + | chr1.1:78015757-78015776 | None:intergenic | 40.0% | |
| TAGTAAAGACCACCAGAAGT+TGG | + | chr1.1:78015576-78015595 | None:intergenic | 40.0% | |
| TCACCACACTTTACAACACT+GGG | - | chr1.1:78015448-78015467 | MS.gene71767:CDS | 40.0% | |
| TCACGTTGATCCTCTACAAT+CGG | + | chr1.1:78016131-78016150 | None:intergenic | 40.0% | |
| TCCATTATATCAGTGCTCAC+TGG | - | chr1.1:78015423-78015442 | MS.gene71767:CDS | 40.0% | |
| TCTCATTCCATCTGTTGCAA+CGG | - | chr1.1:78016909-78016928 | MS.gene71767:intron | 40.0% | |
| TGAGACTTCAATGACCTATG+TGG | - | chr1.1:78018327-78018346 | MS.gene71767:intron | 40.0% | |
| TGATTCCGATACCGAGTTTA+AGG | + | chr1.1:78015854-78015873 | None:intergenic | 40.0% | |
| TGTCTCAATGGTTATTGGGT+AGG | + | chr1.1:78018681-78018700 | None:intergenic | 40.0% | |
| TTATGCTTTCTCGAGAGATG+GGG | - | chr1.1:78017742-78017761 | MS.gene71767:intron | 40.0% | |
| TTCAATGCTGAAAATGGGGA+TGG | - | chr1.1:78016964-78016983 | MS.gene71767:CDS | 40.0% | |
| TTCACTTGCACAACTCATTC+AGG | - | chr1.1:78016429-78016448 | MS.gene71767:CDS | 40.0% | |
| TTGCATGGTCAAACTTGTGT+GGG | - | chr1.1:78016322-78016341 | MS.gene71767:intron | 40.0% | |
| ! | ATCATTCTCCTTAGTACTGG+TGG | - | chr1.1:78016454-78016473 | MS.gene71767:CDS | 40.0% |
| ! | CATGCTTGTTGCACTTTCAA+TGG | - | chr1.1:78015530-78015549 | MS.gene71767:CDS | 40.0% |
| ! | CATTGAAAGTGCAACAAGCA+TGG | + | chr1.1:78015532-78015551 | None:intergenic | 40.0% |
| ! | CATTGGTAACAACATGAGCT+GGG | + | chr1.1:78015213-78015232 | None:intergenic | 40.0% |
| ! | CCATAACGACCTAAGTTGAA+AGG | + | chr1.1:78018590-78018609 | None:intergenic | 40.0% |
| ! | TACAACACTGGGTTGAACTA+TGG | - | chr1.1:78015459-78015478 | MS.gene71767:CDS | 40.0% |
| ! | TATAGTGGCATTTGAAGCCA+TGG | - | chr1.1:78018475-78018494 | MS.gene71767:CDS | 40.0% |
| ! | TGAGTGCATGTTTGGTTTCA+CGG | - | chr1.1:78015952-78015971 | MS.gene71767:intron | 40.0% |
| ! | TGTTCAGCTTTTCCAACTTC+TGG | - | chr1.1:78015561-78015580 | MS.gene71767:intron | 40.0% |
| !! | ACCAGTGAGCACTGATATAA+TGG | + | chr1.1:78015427-78015446 | None:intergenic | 40.0% |
| !! | ACTAAAGGTGCTGATAGGAA+TGG | - | chr1.1:78017369-78017388 | MS.gene71767:intron | 40.0% |
| !! | AGGAAACTAAAGGTGCTGAT+AGG | - | chr1.1:78017364-78017383 | MS.gene71767:intron | 40.0% |
| !! | AGTACTGGTGGAAAAAATGG+TGG | - | chr1.1:78016466-78016485 | MS.gene71767:CDS | 40.0% |
| !! | AGTGGTAGGCATTGGTTTAA+AGG | - | chr1.1:78018764-78018783 | MS.gene71767:CDS | 40.0% |
| !! | ATAGTGACTTGCTGTGATTC+TGG | + | chr1.1:78015986-78016005 | None:intergenic | 40.0% |
| !! | GGTGCTATTTGGAATGTTCT+TGG | - | chr1.1:78016601-78016620 | MS.gene71767:CDS | 40.0% |
| !! | TATCTTCTTTAGGGTGACCT+TGG | - | chr1.1:78018541-78018560 | MS.gene71767:CDS | 40.0% |
| !!! | CCATGCCATTTTCATCTTTG+TGG | - | chr1.1:78017765-78017784 | MS.gene71767:intron | 40.0% |
| !!! | GCACGAAAGTATTTTGTTCC+AGG | - | chr1.1:78018563-78018582 | MS.gene71767:CDS | 40.0% |
| !!! | GCTGTTGCCATTTTTTTCTG+TGG | - | chr1.1:78017600-78017619 | MS.gene71767:intron | 40.0% |
| AACTACACACCTGTTGCACT+TGG | - | chr1.1:78018704-78018723 | MS.gene71767:intron | 45.0% | |
| AATCACTGCTATGGACACCA+TGG | + | chr1.1:78018495-78018514 | None:intergenic | 45.0% | |
| ACTGGTGGAAAAAATGGTGG+TGG | - | chr1.1:78016469-78016488 | MS.gene71767:CDS | 45.0% | |
| AGAATACCAGCCAGTAATCC+AGG | + | chr1.1:78015643-78015662 | None:intergenic | 45.0% | |
| ATCAAGCATCCAAGTGCAAC+AGG | + | chr1.1:78018716-78018735 | None:intergenic | 45.0% | |
| CAACCCAGTGTTGTAAAGTG+TGG | + | chr1.1:78015454-78015473 | None:intergenic | 45.0% | |
| CAGACCCTACATGTTTCTCT+TGG | - | chr1.1:78016996-78017015 | MS.gene71767:CDS | 45.0% | |
| CCAGCTCATGTTGTTACCAA+TGG | - | chr1.1:78015211-78015230 | MS.gene71767:CDS | 45.0% | |
| CGTTAGAGTGAGTGCATGTT+TGG | - | chr1.1:78015944-78015963 | MS.gene71767:intron | 45.0% | |
| CTGTATTGAACCGCACAAAC+TGG | - | chr1.1:78016716-78016735 | MS.gene71767:intron | 45.0% | |
| GAACCAAACATCGAACTGGT+GGG | - | chr1.1:78016673-78016692 | MS.gene71767:intron | 45.0% | |
| GAAGGAGCAAAATTGCACCA+TGG | + | chr1.1:78016528-78016547 | None:intergenic | 45.0% | |
| GACACTATAGCACTGTTGCA+TGG | + | chr1.1:78017154-78017173 | None:intergenic | 45.0% | |
| GAGCAAAATTGCACCATGGA+TGG | + | chr1.1:78016524-78016543 | None:intergenic | 45.0% | |
| GATTGTAGAGGATCAACGTG+AGG | - | chr1.1:78016130-78016149 | MS.gene71767:intron | 45.0% | |
| GCAGTTCTTTCCAGTTTGTG+CGG | + | chr1.1:78016729-78016748 | None:intergenic | 45.0% | |
| GCTTATGCTTTCTCGAGAGA+TGG | - | chr1.1:78017740-78017759 | MS.gene71767:intron | 45.0% | |
| GGATACTTAGTGGTAGGCAT+TGG | - | chr1.1:78018756-78018775 | MS.gene71767:CDS | 45.0% | |
| GTGGCATAAGGTTAACAAGC+AGG | - | chr1.1:78017784-78017803 | MS.gene71767:intron | 45.0% | |
| TCCATCTGTTGCAACGGAAA+GGG | - | chr1.1:78016915-78016934 | MS.gene71767:intron | 45.0% | |
| TCTAGTCAGACCAACCTGTT+TGG | - | chr1.1:78016799-78016818 | MS.gene71767:intron | 45.0% | |
| TGAACCAAACATCGAACTGG+TGG | - | chr1.1:78016672-78016691 | MS.gene71767:intron | 45.0% | |
| TTCCATCTGTTGCAACGGAA+AGG | - | chr1.1:78016914-78016933 | MS.gene71767:intron | 45.0% | |
| ! | AACACTGGGTTGAACTATGG+TGG | - | chr1.1:78015462-78015481 | MS.gene71767:CDS | 45.0% |
| ! | ATTAGAAGCACACTGAGAGC+TGG | + | chr1.1:78017662-78017681 | None:intergenic | 45.0% |
| ! | CACTGTAAAGCTGACTCTAG+AGG | + | chr1.1:78015909-78015928 | None:intergenic | 45.0% |
| ! | CCATTGGTAACAACATGAGC+TGG | + | chr1.1:78015214-78015233 | None:intergenic | 45.0% |
| ! | CTTTTCGTTTTCAGTGGGCA+GGG | - | chr1.1:78016389-78016408 | MS.gene71767:CDS | 45.0% |
| ! | GCAGTCTCTTGGAAGTATAG+TGG | - | chr1.1:78018460-78018479 | MS.gene71767:CDS | 45.0% |
| ! | GGTGCAATTTTGCTCCTTCA+TGG | - | chr1.1:78016529-78016548 | MS.gene71767:CDS | 45.0% |
| ! | TATTGGAGTGCCAAACTTGC+TGG | - | chr1.1:78015594-78015613 | MS.gene71767:intron | 45.0% |
| ! | TCAGCTTTTCCAACTTCTGG+TGG | - | chr1.1:78015564-78015583 | MS.gene71767:intron | 45.0% |
| ! | TGGTTTGGATTCATTGGAGC+TGG | - | chr1.1:78015359-78015378 | MS.gene71767:CDS | 45.0% |
| !! | CAAACTTGCTGGCTCCAAAT+GGG | - | chr1.1:78015605-78015624 | MS.gene71767:intron | 45.0% |
| !! | TAGGACAACTCGGTGCTATT+TGG | - | chr1.1:78016590-78016609 | MS.gene71767:CDS | 45.0% |
| !! | TGGGTGGGTTGCAGTTATTT+GGG | - | chr1.1:78018619-78018638 | MS.gene71767:intron | 45.0% |
| !! | TTGGGTGGGTTGCAGTTATT+TGG | - | chr1.1:78018618-78018637 | MS.gene71767:intron | 45.0% |
| ATACCAGCCAGTAATCCAGG+AGG | + | chr1.1:78015640-78015659 | None:intergenic | 50.0% | |
| CCAGTAATCCAGGAGGCAAA+AGG | + | chr1.1:78015633-78015652 | None:intergenic | 50.0% | |
| CTGGTGGGATCTCTTAGTTG+TGG | - | chr1.1:78016688-78016707 | MS.gene71767:intron | 50.0% | |
| GATCCCACCAGTTCGATGTT+TGG | + | chr1.1:78016679-78016698 | None:intergenic | 50.0% | |
| GCTATAGCGCAATTGCATGG+CGG | + | chr1.1:78017249-78017268 | None:intergenic | 50.0% | |
| GGCCCAGTTTCCATGCAATA+TGG | - | chr1.1:78015483-78015502 | MS.gene71767:CDS | 50.0% | |
| GTTCCAGGGCCTTTCAACTT+AGG | - | chr1.1:78018578-78018597 | MS.gene71767:CDS | 50.0% | |
| ! | CCATTTGGAGCCAGCAAGTT+TGG | + | chr1.1:78015607-78015626 | None:intergenic | 50.0% |
| ! | CCTTTTGCCTCCTGGATTAC+TGG | - | chr1.1:78015630-78015649 | MS.gene71767:intron | 50.0% |
| ! | GCTTTTCGTTTTCAGTGGGC+AGG | - | chr1.1:78016388-78016407 | MS.gene71767:CDS | 50.0% |
| ! | GTCGAGTGAAGCATCACCAT+TGG | + | chr1.1:78015230-78015249 | None:intergenic | 50.0% |
| ! | GTGGGTTGCAGTTATTTGGG+TGG | - | chr1.1:78018622-78018641 | MS.gene71767:intron | 50.0% |
| !! | CCAAACTTGCTGGCTCCAAA+TGG | - | chr1.1:78015604-78015623 | MS.gene71767:intron | 50.0% |
| GCAATACAGCAAGGGCTGCA+TGG | + | chr1.1:78015748-78015767 | None:intergenic | 55.0% | |
| GCCCTTTCCGTTGCAACAGA+TGG | + | chr1.1:78016919-78016938 | None:intergenic | 55.0% | |
| GGAGCTGGTTGTCAACTGCA+GGG | - | chr1.1:78015374-78015393 | MS.gene71767:CDS | 55.0% | |
| GGTGATGCTTCACTCGACTC+TGG | - | chr1.1:78015232-78015251 | MS.gene71767:CDS | 55.0% | |
| TGGAGCTGGTTGTCAACTGC+AGG | - | chr1.1:78015373-78015392 | MS.gene71767:CDS | 55.0% | |
| TTGCCTCCTGGATTACTGGC+TGG | - | chr1.1:78015634-78015653 | MS.gene71767:intron | 55.0% | |
| ! | AATGGGCACCTTTTGCCTCC+TGG | - | chr1.1:78015622-78015641 | MS.gene71767:intron | 55.0% |
| ! | CGACCTAAGTTGAAAGGCCC+TGG | + | chr1.1:78018584-78018603 | None:intergenic | 55.0% |
| !! | GGAGGCAAAAGGTGCCCATT+TGG | + | chr1.1:78015622-78015641 | None:intergenic | 55.0% |
| GCTGGTTGTCAACTGCAGGG+TGG | - | chr1.1:78015377-78015396 | MS.gene71767:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78015202 | 78018811 | 78015202 | ID=MS.gene71767 |
| chr1.1 | mRNA | 78015202 | 78018811 | 78015202 | ID=MS.gene71767.t1;Parent=MS.gene71767 |
| chr1.1 | exon | 78018705 | 78018811 | 78018705 | ID=MS.gene71767.t1.exon1;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78018705 | 78018811 | 78018705 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| chr1.1 | exon | 78018358 | 78018618 | 78018358 | ID=MS.gene71767.t1.exon2;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78018358 | 78018618 | 78018358 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| chr1.1 | exon | 78017742 | 78017760 | 78017742 | ID=MS.gene71767.t1.exon3;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78017742 | 78017760 | 78017742 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| chr1.1 | exon | 78017391 | 78017610 | 78017391 | ID=MS.gene71767.t1.exon4;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78017391 | 78017610 | 78017391 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| chr1.1 | exon | 78016942 | 78017123 | 78016942 | ID=MS.gene71767.t1.exon5;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78016942 | 78017123 | 78016942 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| chr1.1 | exon | 78016364 | 78016653 | 78016364 | ID=MS.gene71767.t1.exon6;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78016364 | 78016653 | 78016364 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| chr1.1 | exon | 78016148 | 78016277 | 78016148 | ID=MS.gene71767.t1.exon7;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78016148 | 78016277 | 78016148 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| chr1.1 | exon | 78015202 | 78015549 | 78015202 | ID=MS.gene71767.t1.exon8;Parent=MS.gene71767.t1 |
| chr1.1 | CDS | 78015202 | 78015549 | 78015202 | ID=cds.MS.gene71767.t1;Parent=MS.gene71767.t1 |
| Gene Sequence |
| Protein sequence |
