Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71838.t1 | XP_013470187.1 | 96 | 911 | 35 | 1 | 20 | 929 | 15 | 925 | 0.00E+00 | 1838.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71838.t1 | Q9S7Y7 | 75.2 | 890 | 211 | 3 | 42 | 928 | 31 | 913 | 0.0e+00 | 1449.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71838.t1 | A0A072W1R5 | 96.0 | 911 | 35 | 1 | 20 | 929 | 15 | 925 | 0.0e+00 | 1838.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047991 | MS.gene71838 | PPI |
| MS.gene71838 | MS.gene047493 | PPI |
| MS.gene71838 | MS.gene070893 | PPI |
| MS.gene71838 | MS.gene069133 | PPI |
| MS.gene71838 | MS.gene02726 | PPI |
| MS.gene71838 | MS.gene027805 | PPI |
| MS.gene71838 | MS.gene00027 | PPI |
| MS.gene71838 | MS.gene068597 | PPI |
| MS.gene00023 | MS.gene71838 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71838.t1 | MTR_1g110980 | 96.048 | 911 | 35 | 1 | 20 | 929 | 15 | 925 | 0.0 | 1821 |
| MS.gene71838.t1 | MTR_1g111000 | 83.716 | 915 | 132 | 5 | 32 | 929 | 24 | 938 | 0.0 | 1576 |
| MS.gene71838.t1 | MTR_5g057990 | 81.117 | 895 | 164 | 2 | 39 | 928 | 32 | 926 | 0.0 | 1560 |
| MS.gene71838.t1 | MTR_3g096870 | 27.910 | 842 | 480 | 24 | 30 | 813 | 36 | 808 | 1.22e-82 | 286 |
| MS.gene71838.t1 | MTR_5g026610 | 30.769 | 715 | 404 | 21 | 185 | 887 | 81 | 716 | 1.57e-80 | 280 |
| MS.gene71838.t1 | MTR_5g026610 | 30.769 | 715 | 404 | 21 | 185 | 887 | 144 | 779 | 2.90e-80 | 280 |
| MS.gene71838.t1 | MTR_5g026610 | 30.769 | 715 | 404 | 21 | 185 | 887 | 81 | 716 | 7.02e-80 | 280 |
| MS.gene71838.t1 | MTR_5g026610 | 30.769 | 715 | 404 | 21 | 185 | 887 | 144 | 779 | 9.51e-80 | 280 |
| MS.gene71838.t1 | MTR_5g026610 | 30.769 | 715 | 404 | 21 | 185 | 887 | 184 | 819 | 3.21e-79 | 279 |
| MS.gene71838.t1 | MTR_5g026610 | 31.319 | 546 | 304 | 14 | 346 | 887 | 2 | 480 | 3.33e-63 | 228 |
| MS.gene71838.t1 | MTR_6g014900 | 62.264 | 53 | 20 | 0 | 644 | 696 | 80 | 132 | 2.04e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71838.t1 | AT1G68560 | 75.169 | 890 | 211 | 3 | 42 | 928 | 31 | 913 | 0.0 | 1437 |
| MS.gene71838.t1 | AT3G45940 | 66.704 | 898 | 228 | 7 | 39 | 929 | 21 | 854 | 0.0 | 1237 |
| MS.gene71838.t1 | AT5G11720 | 45.978 | 920 | 454 | 13 | 20 | 927 | 13 | 901 | 0.0 | 833 |
| MS.gene71838.t1 | AT5G63840 | 29.129 | 769 | 436 | 23 | 155 | 888 | 189 | 883 | 1.84e-84 | 291 |
| MS.gene71838.t1 | AT5G63840 | 29.129 | 769 | 436 | 23 | 155 | 888 | 216 | 910 | 3.01e-84 | 291 |
| MS.gene71838.t1 | AT3G23640 | 33.007 | 612 | 314 | 19 | 228 | 825 | 119 | 648 | 1.01e-83 | 291 |
| MS.gene71838.t1 | AT3G23640 | 33.007 | 612 | 314 | 19 | 228 | 825 | 119 | 648 | 1.01e-83 | 291 |
| MS.gene71838.t1 | AT3G23640 | 33.007 | 612 | 314 | 19 | 228 | 825 | 188 | 717 | 2.11e-83 | 291 |
Find 261 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATGCTCATAGTATTTA+TGG | 0.119026 | 1.3:-75646674 | MS.gene71838:CDS |
| TATAACATCAAGTGGAATTT+TGG | 0.152772 | 1.3:+75647267 | None:intergenic |
| CCATTTCCAAGCTTCATTTC+TGG | 0.177210 | 1.3:+75645825 | None:intergenic |
| TCCAGAAAGTTTAAAAGTTT+TGG | 0.188609 | 1.3:+75647178 | None:intergenic |
| ATATCCACTATGCTGAATTT+TGG | 0.203228 | 1.3:-75646497 | MS.gene71838:CDS |
| CCAATGCCTTATTGGGCTTT+TGG | 0.214511 | 1.3:-75648110 | MS.gene71838:intron |
| GACCAGCTCCAATGCCTTAT+TGG | 0.219272 | 1.3:-75648118 | MS.gene71838:CDS |
| TTGTCCCAGTTGATGGCTTA+TGG | 0.228309 | 1.3:-75646928 | MS.gene71838:CDS |
| CATGAACTTGTCCCAGTTGA+TGG | 0.228489 | 1.3:-75646935 | MS.gene71838:CDS |
| TCTTTGACATACAAGATTAT+TGG | 0.237986 | 1.3:-75648218 | MS.gene71838:CDS |
| AAATTCCACTTGATGTTATA+TGG | 0.240384 | 1.3:-75647264 | MS.gene71838:CDS |
| CATTTAGCTTTGCAGTTAAA+AGG | 0.247218 | 1.3:-75648580 | MS.gene71838:CDS |
| ATAAATGTGTTAGGATTAAA+TGG | 0.248372 | 1.3:-75645690 | MS.gene71838:CDS |
| AATCTCAACACTGATCTATA+TGG | 0.257614 | 1.3:-75648347 | MS.gene71838:CDS |
| TAATATGAGCCTCATAGTTT+AGG | 0.266079 | 1.3:+75646249 | None:intergenic |
| TAGTAGAAATTTCCAAATAT+TGG | 0.282009 | 1.3:+75648483 | None:intergenic |
| TTTGGATGTGGGTAGTTAAC+TGG | 0.282850 | 1.3:+75647196 | None:intergenic |
| GGCAAGTTTGCTTTGGATAA+AGG | 0.286766 | 1.3:-75645729 | MS.gene71838:CDS |
| TTCAAGGGCTTCAAGGAAAA+AGG | 0.287612 | 1.3:-75646619 | MS.gene71838:CDS |
| TCAATCCTAAAACAGTTTCT+TGG | 0.296518 | 1.3:-75646982 | MS.gene71838:CDS |
| CCCTACAAAATTAATGCTTC+AGG | 0.297372 | 1.3:-75646764 | MS.gene71838:CDS |
| CGCTCTACTTATGTTGGTTC+TGG | 0.298045 | 1.3:-75646581 | MS.gene71838:CDS |
| ACCATACAGAGAAGCATCTT+TGG | 0.303967 | 1.3:+75648454 | None:intergenic |
| CAATGCATTTCTTGCTGATT+CGG | 0.305619 | 1.3:+75646307 | None:intergenic |
| AGTCCACTATAATGGCATTT+TGG | 0.307844 | 1.3:-75646699 | MS.gene71838:CDS |
| CCACATGCAAGGGTGCATTA+AGG | 0.309564 | 1.3:+75646009 | None:intergenic |
| TAGATCAGTGTTGAGATTAA+TGG | 0.310952 | 1.3:+75648352 | None:intergenic |
| ACCAGCTCCAATGCCTTATT+GGG | 0.314645 | 1.3:-75648117 | MS.gene71838:CDS |
| GACCCTAATGGCGCTATTAC+AGG | 0.315015 | 1.3:-75648947 | MS.gene71838:CDS |
| CCCAAAGATGCTTCTCTGTA+TGG | 0.323700 | 1.3:-75648455 | MS.gene71838:CDS |
| GTAGAGCGGGTCAAAATAAA+AGG | 0.331081 | 1.3:+75646596 | None:intergenic |
| ACTTGACATAGAAGCTTAGA+AGG | 0.337498 | 1.3:+75648876 | None:intergenic |
| GGCTGCTCCCAAGCAAGAAT+TGG | 0.338732 | 1.3:+75646156 | None:intergenic |
| CTATCAACTTTCACATTTGT+TGG | 0.339792 | 1.3:+75645630 | None:intergenic |
| TACGCGTGACTTTGGACTTT+AGG | 0.343935 | 1.3:+75649214 | None:intergenic |
| CCAAAGCAAACTTGCCCTCT+TGG | 0.345644 | 1.3:+75645736 | None:intergenic |
| AACCATTCTTGGCTCAAGTT+TGG | 0.355816 | 1.3:-75647033 | MS.gene71838:CDS |
| ATTGACACAATAAATGTGTT+AGG | 0.356484 | 1.3:-75645699 | MS.gene71838:CDS |
| TTTCTAAGATCCATGTATAC+AGG | 0.357210 | 1.3:+75648317 | None:intergenic |
| AGATGCTTCTCTGTATGGTT+TGG | 0.363311 | 1.3:-75648450 | MS.gene71838:CDS |
| ACATGAGGGTGAACCATTCT+TGG | 0.363472 | 1.3:-75647044 | MS.gene71838:CDS |
| AATATGAGCCTCATAGTTTA+GGG | 0.368306 | 1.3:+75646250 | None:intergenic |
| CATTACCTTACGCGTGACTT+TGG | 0.369962 | 1.3:+75649206 | None:intergenic |
| TACTCATGATCCCATCTTCC+AGG | 0.371397 | 1.3:+75645503 | None:intergenic |
| AGTCCTGTAATAGCGCCATT+AGG | 0.371932 | 1.3:+75648944 | None:intergenic |
| CCAAGAGGGCAAGTTTGCTT+TGG | 0.372848 | 1.3:-75645736 | MS.gene71838:CDS |
| CCTTTGGTATACACCATAAC+TGG | 0.373757 | 1.3:+75647093 | None:intergenic |
| TACAAAGTATAAGGATCATT+TGG | 0.373848 | 1.3:+75648392 | None:intergenic |
| GATCAGTACACTTCCTTCAT+TGG | 0.374148 | 1.3:-75648143 | MS.gene71838:CDS |
| ACCTTGTTGCATTGGTAGAA+TGG | 0.383857 | 1.3:+75645962 | None:intergenic |
| ACAAGTGCAGTCCACTATAA+TGG | 0.387331 | 1.3:-75646707 | MS.gene71838:CDS |
| TTAAATGGAAATGGAGCAAT+AGG | 0.388884 | 1.3:-75645675 | MS.gene71838:CDS |
| TACAGGACTTCTACAAGTTA+AGG | 0.389135 | 1.3:-75648930 | MS.gene71838:CDS |
| TCAATCCATAAGCCATCAAC+TGG | 0.391311 | 1.3:+75646923 | None:intergenic |
| GATGCTTCTCTGTATGGTTT+GGG | 0.391963 | 1.3:-75648449 | MS.gene71838:CDS |
| CAAGTCATTATTTCAAAAGA+TGG | 0.393569 | 1.3:-75646044 | MS.gene71838:CDS |
| AAGAAGGAACTGTGAAAGTT+TGG | 0.394722 | 1.3:-75645767 | MS.gene71838:CDS |
| CTCAGACACATTTGGTCCAC+TGG | 0.395057 | 1.3:-75648516 | MS.gene71838:CDS |
| CTTTGAAGCAGAACATTAAG+AGG | 0.405095 | 1.3:-75648673 | MS.gene71838:CDS |
| TCAGGATTACAAGCTCCTAT+AGG | 0.405226 | 1.3:-75646746 | MS.gene71838:CDS |
| TCTCCTTCATTTGCACCTGC+TGG | 0.405632 | 1.3:+75645885 | None:intergenic |
| ATAGGTACCATTGAGATAGA+TGG | 0.407246 | 1.3:-75645657 | MS.gene71838:CDS |
| AAGAAAAGAGGCCTAGCAAT+TGG | 0.409525 | 1.3:+75646218 | None:intergenic |
| TCAGTGGTATACAAAGTATA+AGG | 0.411774 | 1.3:+75648383 | None:intergenic |
| TGTGTCTGAGTCATTAGAAT+TGG | 0.412803 | 1.3:+75648529 | None:intergenic |
| GTTCATCATCATCAATGAAT+AGG | 0.413581 | 1.3:+75645850 | None:intergenic |
| CCAGAAATGAAGCTTGGAAA+TGG | 0.414689 | 1.3:-75645825 | MS.gene71838:CDS |
| AAAGGTGGTGGTTGCTCCCT+AGG | 0.416767 | 1.3:+75648692 | None:intergenic |
| AACTATGAGGCTCATATTAG+TGG | 0.419212 | 1.3:-75646245 | MS.gene71838:CDS |
| GTGTTAGGATTAAATGGAAA+TGG | 0.422067 | 1.3:-75645684 | MS.gene71838:CDS |
| ATCATACCAAAAGCCCAATA+AGG | 0.422925 | 1.3:+75648104 | None:intergenic |
| GCATTGGACAGGTGACAATC+AGG | 0.426225 | 1.3:-75646546 | MS.gene71838:CDS |
| CACATGCAAGGGTGCATTAA+GGG | 0.430928 | 1.3:+75646010 | None:intergenic |
| GAAGCTTCAAATTTCTGCTC+TGG | 0.432143 | 1.3:-75646893 | MS.gene71838:CDS |
| GTCCTGTAATAGCGCCATTA+GGG | 0.433187 | 1.3:+75648945 | None:intergenic |
| AAGGCCCTTCAAGGGCTTCA+AGG | 0.433715 | 1.3:-75646626 | MS.gene71838:CDS |
| AATAAACTATACCATGTTCC+AGG | 0.435029 | 1.3:+75646077 | None:intergenic |
| AAGCTTAGAAGGGGAATGTC+TGG | 0.435204 | 1.3:+75648887 | None:intergenic |
| AGAAAAGAGGCCTAGCAATT+GGG | 0.436988 | 1.3:+75646219 | None:intergenic |
| GCAACTCACAAGGCCCTTCA+AGG | 0.440545 | 1.3:-75646635 | MS.gene71838:CDS |
| AAGGAGAAGAATGATATCTA+TGG | 0.442211 | 1.3:-75648911 | MS.gene71838:CDS |
| CATACTGATGGTTGGAATGA+AGG | 0.445016 | 1.3:-75645562 | MS.gene71838:CDS |
| CAAGAACAGGAGAAATCATT+AGG | 0.446334 | 1.3:+75646135 | None:intergenic |
| ATAGTTTAGGGTGTACAGAT+AGG | 0.447057 | 1.3:+75646262 | None:intergenic |
| CTCTTAATGTTCTGCTTCAA+AGG | 0.448498 | 1.3:+75648674 | None:intergenic |
| TAAGCACCCAATTCTTGCTT+GGG | 0.448524 | 1.3:-75646163 | MS.gene71838:CDS |
| ATCATTCCACCTTGTTGCAT+TGG | 0.448757 | 1.3:+75645954 | None:intergenic |
| AAGGTGTGCCCAAGTGGAAC+AGG | 0.448760 | 1.3:-75646848 | MS.gene71838:CDS |
| CCATACAGAGAAGCATCTTT+GGG | 0.449022 | 1.3:+75648455 | None:intergenic |
| ATTCCAAAATGCCATTATAG+TGG | 0.449801 | 1.3:+75646696 | None:intergenic |
| TCTAATGACTCAGACACATT+TGG | 0.450096 | 1.3:-75648524 | MS.gene71838:CDS |
| TGGTTTCCCATCTATCTCAA+TGG | 0.452061 | 1.3:+75645650 | None:intergenic |
| CATCATTAGCCATACCCCTT+TGG | 0.452655 | 1.3:+75647077 | None:intergenic |
| CAAAGCTCTTCAGTGGGTTG+TGG | 0.452865 | 1.3:+75646428 | None:intergenic |
| GTTTGCTTTGGATAAAGGTT+GGG | 0.454749 | 1.3:-75645724 | MS.gene71838:CDS |
| CTAAGCACCCAATTCTTGCT+TGG | 0.455170 | 1.3:-75646164 | MS.gene71838:CDS |
| CATCAACTGGGACAAGTTCA+TGG | 0.455884 | 1.3:+75646936 | None:intergenic |
| TTTGCATGGTCCCTTGAGAA+TGG | 0.461057 | 1.3:+75646374 | None:intergenic |
| GAATCAGCAAGAAATGCATT+GGG | 0.462602 | 1.3:-75646305 | MS.gene71838:CDS |
| CAAGAAATGCATTGGGGATG+AGG | 0.468281 | 1.3:-75646298 | MS.gene71838:CDS |
| TCTATTCAAGATGACCCTAA+TGG | 0.470340 | 1.3:-75648959 | MS.gene71838:CDS |
| ACTTGCATGAAAGTCAATAT+AGG | 0.474923 | 1.3:+75645794 | None:intergenic |
| CAACCAGGTCCTGTTCCACT+TGG | 0.475155 | 1.3:+75646839 | None:intergenic |
| ATGTTCTGCTTCAAAGGTGG+TGG | 0.476297 | 1.3:+75648680 | None:intergenic |
| CAGGTGACAATCAGGGTACA+TGG | 0.478047 | 1.3:-75646538 | MS.gene71838:CDS |
| ATTGCTGTTAACTCCAGTTA+TGG | 0.478467 | 1.3:-75647106 | MS.gene71838:CDS |
| CTATAACATTCAATATAAGT+TGG | 0.479207 | 1.3:+75646188 | None:intergenic |
| TCCCTAGGCAAAAGATCATA+AGG | 0.479850 | 1.3:+75648707 | None:intergenic |
| TTGACCCGCTCTACTTATGT+TGG | 0.486226 | 1.3:-75646587 | MS.gene71838:CDS |
| GTGCTTTCTATCCATTCTCA+AGG | 0.488078 | 1.3:-75646385 | MS.gene71838:CDS |
| ATCTCAACACTGATCTATAT+GGG | 0.488362 | 1.3:-75648346 | MS.gene71838:CDS |
| ATTTCTCCTGTTCTTGAGCA+AGG | 0.488456 | 1.3:-75646128 | MS.gene71838:CDS |
| CTGATGCAAAGAACAAAAGA+TGG | 0.489866 | 1.3:-75648736 | MS.gene71838:CDS |
| TATAACATTCAATATAAGTT+GGG | 0.490424 | 1.3:+75646189 | None:intergenic |
| CGAATCAGCAAGAAATGCAT+TGG | 0.490570 | 1.3:-75646306 | MS.gene71838:CDS |
| CAGTTATGGTGTATACCAAA+GGG | 0.490868 | 1.3:-75647092 | MS.gene71838:CDS |
| CAAATGAAGGAGAGGCTAAA+GGG | 0.490889 | 1.3:-75645875 | MS.gene71838:CDS |
| CTCACACCACAGGGATAGAA+TGG | 0.492420 | 1.3:-75649254 | MS.gene71838:CDS |
| CCACTGAAGAGCTTTGCAAT+AGG | 0.494841 | 1.3:-75646421 | MS.gene71838:CDS |
| TACTGATCAACAACACTAAG+AGG | 0.496797 | 1.3:+75648158 | None:intergenic |
| GCTGCTCCCAAGCAAGAATT+GGG | 0.497643 | 1.3:+75646157 | None:intergenic |
| TACATGGATCTTAGAAATGA+AGG | 0.499719 | 1.3:-75648311 | MS.gene71838:CDS |
| TTGACATACAAGATTATTGG+AGG | 0.500018 | 1.3:-75648215 | MS.gene71838:CDS |
| AAATATGCAGCGCATTGGAC+AGG | 0.500413 | 1.3:-75646557 | MS.gene71838:CDS |
| AGTTTGCTTTGGATAAAGGT+TGG | 0.501919 | 1.3:-75645725 | MS.gene71838:CDS |
| GTGGGTAGTTAACTGGATTG+AGG | 0.503347 | 1.3:+75647203 | None:intergenic |
| CAACATCTTCTACAACAGAT+AGG | 0.504167 | 1.3:+75647308 | None:intergenic |
| TGCAATAGGTGGATTGAAGT+TGG | 0.505532 | 1.3:-75646407 | MS.gene71838:CDS |
| TGGGTCTCACCCTGTATACA+TGG | 0.507089 | 1.3:-75648327 | MS.gene71838:CDS |
| AAGGGCCTTGTGAGTTGCAA+TGG | 0.508279 | 1.3:+75646640 | None:intergenic |
| TACATACACGGACGAGGAGA+TGG | 0.510137 | 1.3:-75645594 | MS.gene71838:CDS |
| GCCCAATAAGGCATTGGAGC+TGG | 0.510842 | 1.3:+75648116 | None:intergenic |
| ATACTGATGGTTGGAATGAA+GGG | 0.512323 | 1.3:-75645561 | MS.gene71838:CDS |
| GCGTGACTTTGGACTTTAGG+AGG | 0.515965 | 1.3:+75649217 | None:intergenic |
| GAACTTCCAGAAATGAAGCT+TGG | 0.516701 | 1.3:-75645831 | MS.gene71838:CDS |
| ATTCTTGGCTCAAGTTTGGC+CGG | 0.516954 | 1.3:-75647029 | MS.gene71838:CDS |
| CGGACGAGGAGATGGAGAAA+AGG | 0.517075 | 1.3:-75645586 | MS.gene71838:CDS |
| ATATTTGGGGTGCCAATGGT+TGG | 0.517574 | 1.3:-75646473 | MS.gene71838:CDS |
| TTCTATCCCTGTGGTGTGAG+TGG | 0.518278 | 1.3:+75649257 | None:intergenic |
| AACAAAACACCATGTGCATT+AGG | 0.518720 | 1.3:+75648281 | None:intergenic |
| TCCTAAAACAGTTTCTTGGT+GGG | 0.519260 | 1.3:-75646978 | MS.gene71838:CDS |
| ATCCTAAAACAGTTTCTTGG+TGG | 0.519347 | 1.3:-75646979 | MS.gene71838:CDS |
| TGGGTAGTTAACTGGATTGA+GGG | 0.520183 | 1.3:+75647204 | None:intergenic |
| CACTCTTTCCACCTGGAACA+TGG | 0.523724 | 1.3:-75646088 | MS.gene71838:CDS |
| TGGAGCTGGTCTACCAATGA+AGG | 0.528059 | 1.3:+75648130 | None:intergenic |
| TATTCCAAAATTCAGCATAG+TGG | 0.528216 | 1.3:+75646493 | None:intergenic |
| CATCTTGAATAGATATCAAA+CGG | 0.529181 | 1.3:+75648969 | None:intergenic |
| TGGAATATTTGGGGTGCCAA+TGG | 0.529991 | 1.3:-75646477 | MS.gene71838:CDS |
| TGCCCAAGTGGAACAGGACC+TGG | 0.530293 | 1.3:-75646842 | MS.gene71838:CDS |
| CTGAAGAGCTTTGCAATAGG+TGG | 0.530495 | 1.3:-75646418 | MS.gene71838:CDS |
| TCAGGAAAGTACACTGCTCC+CGG | 0.530887 | 1.3:+75647010 | None:intergenic |
| GGTGGGTCCACTCACACCAC+AGG | 0.531272 | 1.3:-75649264 | MS.gene71838:CDS |
| TAGGTACCATTGAGATAGAT+GGG | 0.534381 | 1.3:-75645656 | MS.gene71838:CDS |
| TACATTGTGATAATTGATCC+TGG | 0.535776 | 1.3:-75647130 | MS.gene71838:CDS |
| TGCTTTCTATCCATTCTCAA+GGG | 0.536525 | 1.3:-75646384 | MS.gene71838:CDS |
| TTCTTGGCTCAAGTTTGGCC+GGG | 0.536828 | 1.3:-75647028 | MS.gene71838:CDS |
| GCAAATGAAGGAGAGGCTAA+AGG | 0.537400 | 1.3:-75645876 | MS.gene71838:CDS |
| CCAAAAGCCCAATAAGGCAT+TGG | 0.538141 | 1.3:+75648110 | None:intergenic |
| TGGTGTATACCAAAGGGGTA+TGG | 0.538274 | 1.3:-75647086 | MS.gene71838:CDS |
| GGTAAGTGCACAATTCCTAC+AGG | 0.539062 | 1.3:-75646872 | MS.gene71838:CDS |
| TCATTCCATATAACATCAAG+TGG | 0.540109 | 1.3:+75647259 | None:intergenic |
| TTTGCTATGACCTGGAAGAT+GGG | 0.540274 | 1.3:-75645513 | MS.gene71838:CDS |
| TAGGATTCCACCAATGCAGA+TGG | 0.540727 | 1.3:-75647342 | MS.gene71838:CDS |
| GTTGTTGAATAGCAATGGAA+TGG | 0.541632 | 1.3:-75648261 | MS.gene71838:CDS |
| CTCATTGTGACATTTCCAGC+AGG | 0.542665 | 1.3:-75645900 | MS.gene71838:CDS |
| AATAATCTTGTATGTCAAAG+AGG | 0.542940 | 1.3:+75648220 | None:intergenic |
| ATGGTTGGTTCAGATATATG+TGG | 0.546708 | 1.3:-75646458 | MS.gene71838:CDS |
| GAAAAGGACATACTGATGGT+TGG | 0.547292 | 1.3:-75645570 | MS.gene71838:CDS |
| GGCCAAACTTGAGCCAAGAA+TGG | 0.547868 | 1.3:+75647031 | None:intergenic |
| GACATACAAGATTATTGGAG+GGG | 0.549179 | 1.3:-75648213 | MS.gene71838:CDS |
| TTTCTCCTGTTCTTGAGCAA+GGG | 0.549514 | 1.3:-75646127 | MS.gene71838:CDS |
| TTTCCAGCAGGTGCAAATGA+AGG | 0.551846 | 1.3:-75645888 | MS.gene71838:CDS |
| GATAACCCCATCTGCATTGG+TGG | 0.551913 | 1.3:+75647335 | None:intergenic |
| TAGTTTAGGGTGTACAGATA+GGG | 0.553113 | 1.3:+75646263 | None:intergenic |
| CTGGGACAAGTTCATGGAAG+CGG | 0.554828 | 1.3:+75646942 | None:intergenic |
| CACTGGTAAAGTTCTTGTCT+AGG | 0.557100 | 1.3:+75646341 | None:intergenic |
| CTGGCAAATATGCAGCGCAT+TGG | 0.559080 | 1.3:-75646562 | MS.gene71838:CDS |
| GTTGGGAATGAGAAGAAAAG+AGG | 0.561118 | 1.3:+75646206 | None:intergenic |
| GAAAAGAGGCCTAGCAATTG+GGG | 0.562110 | 1.3:+75646220 | None:intergenic |
| GTGAACATTGACCACATGCA+AGG | 0.563932 | 1.3:+75645998 | None:intergenic |
| AGGATTCCACCAATGCAGAT+GGG | 0.564418 | 1.3:-75647341 | MS.gene71838:CDS |
| CCTAAAACAGTTTCTTGGTG+GGG | 0.565502 | 1.3:-75646977 | MS.gene71838:CDS |
| CAACTCACAAGGCCCTTCAA+GGG | 0.567312 | 1.3:-75646634 | MS.gene71838:CDS |
| TTAATGTTCTGCTTCAAAGG+TGG | 0.568031 | 1.3:+75648677 | None:intergenic |
| CATATATCTGAACCAACCAT+TGG | 0.568580 | 1.3:+75646461 | None:intergenic |
| CTTGGGCACACCTTTCCTGT+AGG | 0.572378 | 1.3:+75646857 | None:intergenic |
| CAAAATTACATACACGGACG+AGG | 0.575505 | 1.3:-75645600 | MS.gene71838:CDS |
| ATGAGACTGAGAATCGTTTG+AGG | 0.575745 | 1.3:-75648769 | MS.gene71838:CDS |
| TTAGTGGAGCCCCAATTGCT+AGG | 0.575758 | 1.3:-75646229 | MS.gene71838:CDS |
| AGAACCAACATAAGTAGAGC+GGG | 0.575941 | 1.3:+75646583 | None:intergenic |
| GTTGATGCACTCTTTCCACC+TGG | 0.578199 | 1.3:-75646095 | MS.gene71838:CDS |
| TTTCATGCAAGTGTGAAAGA+AGG | 0.578257 | 1.3:-75645783 | MS.gene71838:CDS |
| ATCAACAACACTAAGAGGCG+TGG | 0.579909 | 1.3:+75648163 | None:intergenic |
| CCAGTTATGGTGTATACCAA+AGG | 0.580821 | 1.3:-75647093 | MS.gene71838:CDS |
| TATTGGTCTTTGAAAACCAG+TGG | 0.581118 | 1.3:+75648500 | None:intergenic |
| CTGGAAAGAATACACAACAT+TGG | 0.582134 | 1.3:-75647160 | MS.gene71838:CDS |
| TGAGACTGAGAATCGTTTGA+GGG | 0.582986 | 1.3:-75648768 | MS.gene71838:CDS |
| CCTATTGCAAAGCTCTTCAG+TGG | 0.583146 | 1.3:+75646421 | None:intergenic |
| CTTTAGGAGGATCACGCGTG+TGG | 0.583667 | 1.3:+75649230 | None:intergenic |
| TCAAACCATTGCAACTCACA+AGG | 0.584934 | 1.3:-75646645 | MS.gene71838:CDS |
| GCAGTTAAAAGGAAGTCCAC+TGG | 0.589329 | 1.3:-75648569 | MS.gene71838:CDS |
| ATTATAGTGGACTGCACTTG+TGG | 0.589749 | 1.3:+75646709 | None:intergenic |
| CAGAACCAACATAAGTAGAG+CGG | 0.592513 | 1.3:+75646582 | None:intergenic |
| TGATGCAAAGAACAAAAGAT+GGG | 0.592705 | 1.3:-75648735 | MS.gene71838:CDS |
| TAGGAGAGTAGTAGTTTGCA+TGG | 0.596826 | 1.3:+75646360 | None:intergenic |
| ACAGGAAAGGTGTGCCCAAG+TGG | 0.597191 | 1.3:-75646854 | MS.gene71838:CDS |
| ATTCGGCTACCGTCTCCCAC+TGG | 0.597682 | 1.3:+75646324 | None:intergenic |
| TGTGATAACCCCATCTGCAT+TGG | 0.599649 | 1.3:+75647332 | None:intergenic |
| CTGGAGTTAACAGCAATACC+AGG | 0.601210 | 1.3:+75647112 | None:intergenic |
| TGAACATTGACCACATGCAA+GGG | 0.601566 | 1.3:+75645999 | None:intergenic |
| TGACATACAAGATTATTGGA+GGG | 0.601737 | 1.3:-75648214 | MS.gene71838:CDS |
| AAATGAGTGAAATGCAAGGT+GGG | 0.604634 | 1.3:-75649281 | MS.gene71838:CDS |
| AAGGGCTTAAATATCCCTGT+AGG | 0.605232 | 1.3:-75645543 | MS.gene71838:CDS |
| AACCAGGTCCTGTTCCACTT+GGG | 0.611141 | 1.3:+75646840 | None:intergenic |
| GGAGAGAACACACAGCCACA+TGG | 0.612891 | 1.3:-75648428 | MS.gene71838:CDS |
| CTATTGCAAAGCTCTTCAGT+GGG | 0.613210 | 1.3:+75646422 | None:intergenic |
| CTTGACATAGAAGCTTAGAA+GGG | 0.615117 | 1.3:+75648877 | None:intergenic |
| AAACATCACAAGCACACGGT+GGG | 0.616561 | 1.3:-75646795 | MS.gene71838:CDS |
| TTCTAAGATCCATGTATACA+GGG | 0.616903 | 1.3:+75648318 | None:intergenic |
| ACAAGGTGGAATGATATCAA+AGG | 0.616910 | 1.3:-75645946 | MS.gene71838:CDS |
| CATTGGACAGGTGACAATCA+GGG | 0.618247 | 1.3:-75646545 | MS.gene71838:CDS |
| AGCAGGTGCAAATGAAGGAG+AGG | 0.618963 | 1.3:-75645883 | MS.gene71838:CDS |
| GTGCACAATTCCTACAGGAA+AGG | 0.623409 | 1.3:-75646867 | MS.gene71838:CDS |
| TCTGTACACCCTAAACTATG+AGG | 0.624919 | 1.3:-75646258 | MS.gene71838:CDS |
| AAATGTCACAATGAGGCTGA+AGG | 0.625056 | 1.3:+75645908 | None:intergenic |
| GGATACAACTTTATCCCATG+TGG | 0.625392 | 1.3:+75648413 | None:intergenic |
| TGGAGAAAAGGACATACTGA+TGG | 0.627650 | 1.3:-75645574 | MS.gene71838:CDS |
| GGATTCCACCAATGCAGATG+GGG | 0.628625 | 1.3:-75647340 | MS.gene71838:CDS |
| CAATCCATAAGCCATCAACT+GGG | 0.630686 | 1.3:+75646924 | None:intergenic |
| TGATCACATGGATGGACACA+AGG | 0.631580 | 1.3:-75647233 | MS.gene71838:CDS |
| GAGAGAACACACAGCCACAT+GGG | 0.635497 | 1.3:-75648427 | MS.gene71838:CDS |
| AATGATGATGATCACATGGA+TGG | 0.638145 | 1.3:-75647241 | MS.gene71838:CDS |
| ATTAATGGCTGCTACATCAG+TGG | 0.640222 | 1.3:+75648367 | None:intergenic |
| TTTAGGAGGATCACGCGTGT+GGG | 0.643359 | 1.3:+75649231 | None:intergenic |
| CAAGTGGAACAGGACCTGGT+TGG | 0.645866 | 1.3:-75646838 | MS.gene71838:CDS |
| AGGTGACAATCAGGGTACAT+GGG | 0.648038 | 1.3:-75646537 | MS.gene71838:CDS |
| TTGACATAGAAGCTTAGAAG+GGG | 0.648594 | 1.3:+75648878 | None:intergenic |
| TAGACAAGAACTTTACCAGT+GGG | 0.654459 | 1.3:-75646339 | MS.gene71838:CDS |
| TCAACAACACTAAGAGGCGT+GGG | 0.655202 | 1.3:+75648164 | None:intergenic |
| GTTTGGTCACAAGTCCAAGA+GGG | 0.655566 | 1.3:-75645750 | MS.gene71838:CDS |
| AATGTCACAATGAGGCTGAA+GGG | 0.661240 | 1.3:+75645909 | None:intergenic |
| ACCATTCTACCAATGCAACA+AGG | 0.665037 | 1.3:-75645963 | MS.gene71838:CDS |
| AAACTATACCATGTTCCAGG+TGG | 0.669325 | 1.3:+75646080 | None:intergenic |
| ATGGAATGATGATGATCACA+TGG | 0.669871 | 1.3:-75647245 | MS.gene71838:CDS |
| AGAACTTTACCAGTGGGAGA+CGG | 0.673338 | 1.3:-75646333 | MS.gene71838:CDS |
| ACTAAACAAAATTACATACA+CGG | 0.676654 | 1.3:-75645606 | MS.gene71838:CDS |
| TCTAAGCAACATATCCAACC+AGG | 0.676689 | 1.3:+75646824 | None:intergenic |
| GTGGGTCCACTCACACCACA+GGG | 0.676753 | 1.3:-75649263 | MS.gene71838:CDS |
| ATGGATCTTAGAAATGAAGG+TGG | 0.682988 | 1.3:-75648308 | MS.gene71838:CDS |
| GGGTGCATTAAGGGTCACGT+TGG | 0.683940 | 1.3:+75646019 | None:intergenic |
| AGTTTGGTCACAAGTCCAAG+AGG | 0.685776 | 1.3:-75645751 | MS.gene71838:CDS |
| CCTTAATGCACCCTTGCATG+TGG | 0.686026 | 1.3:-75646009 | MS.gene71838:CDS |
| CTAGACAAGAACTTTACCAG+TGG | 0.689103 | 1.3:-75646340 | MS.gene71838:CDS |
| AGTTATGGTGTATACCAAAG+GGG | 0.702184 | 1.3:-75647091 | MS.gene71838:CDS |
| AAAATGAGTGAAATGCAAGG+TGG | 0.706989 | 1.3:-75649282 | MS.gene71838:CDS |
| CTGCTGGAAATGTCACAATG+AGG | 0.707489 | 1.3:+75645901 | None:intergenic |
| GGTGGCAAGCCTAATGCACA+TGG | 0.716525 | 1.3:-75648290 | MS.gene71838:CDS |
| AAAACATCACAAGCACACGG+TGG | 0.716740 | 1.3:-75646796 | MS.gene71838:CDS |
| AATCAGCAAGAAATGCATTG+GGG | 0.721034 | 1.3:-75646304 | MS.gene71838:CDS |
| ATTCTACCAATGCAACAAGG+TGG | 0.724778 | 1.3:-75645960 | MS.gene71838:CDS |
| TGTGGGCCATTCTATCCCTG+TGG | 0.736094 | 1.3:+75649248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACATTCAATATAAGTT+GGG | + | chr1.3:75648599-75648618 | None:intergenic | 15.0% |
| !!! | AAATATTTTATTCCAATACA+TGG | + | chr1.3:75647261-75647280 | None:intergenic | 15.0% |
| !!! | TGTTTTAATATTTTAAGTCA+CGG | - | chr1.3:75646965-75646984 | MS.gene71838:CDS | 15.0% |
| !! | ACTAAACAAAATTACATACA+CGG | - | chr1.3:75649179-75649198 | MS.gene71838:intron | 20.0% |
| !! | ATAAATGTGTTAGGATTAAA+TGG | - | chr1.3:75649095-75649114 | MS.gene71838:intron | 20.0% |
| !! | ATGGATTCATTAAAACATAA+AGG | + | chr1.3:75647208-75647227 | None:intergenic | 20.0% |
| !! | CTATAACATTCAATATAAGT+TGG | + | chr1.3:75648600-75648619 | None:intergenic | 20.0% |
| !! | GGATAGTATATTGTATATAT+CGG | - | chr1.3:75647128-75647147 | MS.gene71838:CDS | 20.0% |
| !! | TAGTAGAAATTTCCAAATAT+TGG | + | chr1.3:75646305-75646324 | None:intergenic | 20.0% |
| !! | TATGTATCTGTATAAAAAGA+TGG | - | chr1.3:75647086-75647105 | MS.gene71838:CDS | 20.0% |
| !!! | AAGATTTCTTTTTTGAAGAA+GGG | - | chr1.3:75646814-75646833 | MS.gene71838:CDS | 20.0% |
| !!! | GTTTTAATATTTTAAGTCAC+GGG | - | chr1.3:75646966-75646985 | MS.gene71838:CDS | 20.0% |
| !!! | TAAGATTTCTTTTTTGAAGA+AGG | - | chr1.3:75646813-75646832 | MS.gene71838:CDS | 20.0% |
| !!! | TACACAGAATAATTTTTTGA+TGG | + | chr1.3:75647377-75647396 | None:intergenic | 20.0% |
| !!! | TATTTTATTTGCTATGTGAT+AGG | - | chr1.3:75647424-75647443 | MS.gene71838:intron | 20.0% |
| !!! | TTTATGTTTTAATGAATCCA+TGG | - | chr1.3:75647207-75647226 | MS.gene71838:CDS | 20.0% |
| ! | AAATCAAGGAACAAAGTATA+AGG | + | chr1.3:75645989-75646008 | None:intergenic | 25.0% |
| ! | AAATTCCACTTGATGTTATA+TGG | - | chr1.3:75647521-75647540 | MS.gene71838:intron | 25.0% |
| ! | AATAAAATAAGTGAGCATGT+TGG | + | chr1.3:75647413-75647432 | None:intergenic | 25.0% |
| ! | AATAATCTTGTATGTCAAAG+AGG | + | chr1.3:75646568-75646587 | None:intergenic | 25.0% |
| ! | ACTAATCCATTTATTCATGA+AGG | - | chr1.3:75647166-75647185 | MS.gene71838:CDS | 25.0% |
| ! | AGTATATTGTATATATCGGT+AGG | - | chr1.3:75647132-75647151 | MS.gene71838:CDS | 25.0% |
| ! | ATTGACACAATAAATGTGTT+AGG | - | chr1.3:75649086-75649105 | MS.gene71838:intron | 25.0% |
| ! | CAAGTCATTATTTCAAAAGA+TGG | - | chr1.3:75648741-75648760 | MS.gene71838:CDS | 25.0% |
| ! | CATCTTGAATAGATATCAAA+CGG | + | chr1.3:75645819-75645838 | None:intergenic | 25.0% |
| ! | GTATATTGTATATATCGGTA+GGG | - | chr1.3:75647133-75647152 | MS.gene71838:CDS | 25.0% |
| ! | TAAATAGAAGACAGAATACT+AGG | + | chr1.3:75646795-75646814 | None:intergenic | 25.0% |
| ! | TAAGAAACAAAGTTAGAAGA+AGG | + | chr1.3:75645738-75645757 | None:intergenic | 25.0% |
| ! | TACAAAGTATAAGGATCATT+TGG | + | chr1.3:75646396-75646415 | None:intergenic | 25.0% |
| ! | TACAAATGTATTATCTACGT+AGG | + | chr1.3:75647062-75647081 | None:intergenic | 25.0% |
| ! | TATGATGCTCATAGTATTTA+TGG | - | chr1.3:75648111-75648130 | MS.gene71838:CDS | 25.0% |
| ! | TCTTTGACATACAAGATTAT+TGG | - | chr1.3:75646567-75646586 | MS.gene71838:CDS | 25.0% |
| !! | ACTTTGTTCCTTGATTTTTA+AGG | - | chr1.3:75645992-75646011 | MS.gene71838:CDS | 25.0% |
| !! | TATAACATCAAGTGGAATTT+TGG | + | chr1.3:75647521-75647540 | None:intergenic | 25.0% |
| !! | TCCAAAACTTTTAAACTTTC+TGG | - | chr1.3:75647606-75647625 | MS.gene71838:intron | 25.0% |
| !! | TCCAGAAAGTTTAAAAGTTT+TGG | + | chr1.3:75647610-75647629 | None:intergenic | 25.0% |
| !!! | AAGTTTAAAAGTTTTGGATG+TGG | + | chr1.3:75647604-75647623 | None:intergenic | 25.0% |
| !!! | AGTTTAAAAGTTTTGGATGT+GGG | + | chr1.3:75647603-75647622 | None:intergenic | 25.0% |
| !!! | ATGCTGAATTTTGGAATATT+TGG | - | chr1.3:75648297-75648316 | MS.gene71838:CDS | 25.0% |
| !!! | GATGTTTTTATCAAACATGA+GGG | - | chr1.3:75647727-75647746 | MS.gene71838:intron | 25.0% |
| !!! | GTATCATACTTTTGATGATA+GGG | - | chr1.3:75646890-75646909 | MS.gene71838:CDS | 25.0% |
| !!! | TGATGTTTTTATCAAACATG+AGG | - | chr1.3:75647726-75647745 | MS.gene71838:intron | 25.0% |
| !!! | TGCTGAATTTTGGAATATTT+GGG | - | chr1.3:75648298-75648317 | MS.gene71838:CDS | 25.0% |
| AAGGAGAAGAATGATATCTA+TGG | - | chr1.3:75645874-75645893 | MS.gene71838:CDS | 30.0% | |
| AATAAACTATACCATGTTCC+AGG | + | chr1.3:75648711-75648730 | None:intergenic | 30.0% | |
| AATATGAGCCTCATAGTTTA+GGG | + | chr1.3:75648538-75648557 | None:intergenic | 30.0% | |
| AATCTCAACACTGATCTATA+TGG | - | chr1.3:75646438-75646457 | MS.gene71838:CDS | 30.0% | |
| ACTTGCATGAAAGTCAATAT+AGG | + | chr1.3:75648994-75649013 | None:intergenic | 30.0% | |
| ATCTCAACACTGATCTATAT+GGG | - | chr1.3:75646439-75646458 | MS.gene71838:CDS | 30.0% | |
| ATTATCTACGTAGGCATATT+TGG | + | chr1.3:75647053-75647072 | None:intergenic | 30.0% | |
| ATTCCAAAATGCCATTATAG+TGG | + | chr1.3:75648092-75648111 | None:intergenic | 30.0% | |
| CTATCAACTTTCACATTTGT+TGG | + | chr1.3:75649158-75649177 | None:intergenic | 30.0% | |
| CTTTCTCCTTCATGAATAAA+TGG | + | chr1.3:75647175-75647194 | None:intergenic | 30.0% | |
| GTATAAGAGTAATAAGACCA+TGG | + | chr1.3:75647227-75647246 | None:intergenic | 30.0% | |
| GTGTTAGGATTAAATGGAAA+TGG | - | chr1.3:75649101-75649120 | MS.gene71838:intron | 30.0% | |
| GTTCATCATCATCAATGAAT+AGG | + | chr1.3:75648938-75648957 | None:intergenic | 30.0% | |
| TAATATGAGCCTCATAGTTT+AGG | + | chr1.3:75648539-75648558 | None:intergenic | 30.0% | |
| TACATGGATCTTAGAAATGA+AGG | - | chr1.3:75646474-75646493 | MS.gene71838:CDS | 30.0% | |
| TACATTGTGATAATTGATCC+TGG | - | chr1.3:75647655-75647674 | MS.gene71838:intron | 30.0% | |
| TATTCCAAAATTCAGCATAG+TGG | + | chr1.3:75648295-75648314 | None:intergenic | 30.0% | |
| TCAATCCTAAAACAGTTTCT+TGG | - | chr1.3:75647803-75647822 | MS.gene71838:intron | 30.0% | |
| TCAGTGGTATACAAAGTATA+AGG | + | chr1.3:75646405-75646424 | None:intergenic | 30.0% | |
| TCATTCCATATAACATCAAG+TGG | + | chr1.3:75647529-75647548 | None:intergenic | 30.0% | |
| TGACATACAAGATTATTGGA+GGG | - | chr1.3:75646571-75646590 | MS.gene71838:CDS | 30.0% | |
| TGATGCAAAGAACAAAAGAT+GGG | - | chr1.3:75646050-75646069 | MS.gene71838:CDS | 30.0% | |
| TGTGACTTAATTTAGAGAGA+TGG | + | chr1.3:75647341-75647360 | None:intergenic | 30.0% | |
| TTAAATGGAAATGGAGCAAT+AGG | - | chr1.3:75649110-75649129 | MS.gene71838:intron | 30.0% | |
| TTGACATACAAGATTATTGG+AGG | - | chr1.3:75646570-75646589 | MS.gene71838:CDS | 30.0% | |
| ! | AAATCTGAGATTGTGATGAT+GGG | - | chr1.3:75646868-75646887 | MS.gene71838:CDS | 30.0% |
| ! | ATAGCAAAACTTTTACCTAC+AGG | + | chr1.3:75649260-75649279 | None:intergenic | 30.0% |
| ! | ATATCCACTATGCTGAATTT+TGG | - | chr1.3:75648288-75648307 | MS.gene71838:CDS | 30.0% |
| ! | CACAATCTCAGATTTCTTTT+TGG | + | chr1.3:75646863-75646882 | None:intergenic | 30.0% |
| ! | CTTGATTTTTACTTCTTTGC+AGG | - | chr1.3:75646597-75646616 | MS.gene71838:CDS | 30.0% |
| ! | GAATGGATGTGTTTTACAAA+GGG | - | chr1.3:75646541-75646560 | MS.gene71838:CDS | 30.0% |
| ! | GGTTTTCAAAGACCAATATT+TGG | - | chr1.3:75646290-75646309 | MS.gene71838:CDS | 30.0% |
| ! | TAGATCAGTGTTGAGATTAA+TGG | + | chr1.3:75646436-75646455 | None:intergenic | 30.0% |
| ! | TAGCAAAACTTTTACCTACA+GGG | + | chr1.3:75649259-75649278 | None:intergenic | 30.0% |
| !! | CATTTAGCTTTGCAGTTAAA+AGG | - | chr1.3:75646205-75646224 | MS.gene71838:CDS | 30.0% |
| !! | CCTGAAGCATTAATTTTGTA+GGG | + | chr1.3:75648024-75648043 | None:intergenic | 30.0% |
| !! | CTTTTAACTGCAAAGCTAAA+TGG | + | chr1.3:75646207-75646226 | None:intergenic | 30.0% |
| !! | GGTATCATACTTTTGATGAT+AGG | - | chr1.3:75646889-75646908 | MS.gene71838:CDS | 30.0% |
| !! | TCCTGAAGCATTAATTTTGT+AGG | + | chr1.3:75648025-75648044 | None:intergenic | 30.0% |
| !! | TTCTAAGATCCATGTATACA+GGG | + | chr1.3:75646470-75646489 | None:intergenic | 30.0% |
| !! | TTTCTAAGATCCATGTATAC+AGG | + | chr1.3:75646471-75646490 | None:intergenic | 30.0% |
| !!! | GCTATAGTTTTGAAACCTAT+AGG | + | chr1.3:75648057-75648076 | None:intergenic | 30.0% |
| !!! | GCTGAATTTTGGAATATTTG+GGG | - | chr1.3:75648299-75648318 | MS.gene71838:CDS | 30.0% |
| !!! | GTTTTAGGATTGAGAAAATC+AGG | + | chr1.3:75647796-75647815 | None:intergenic | 30.0% |
| !!! | GTTTTGTTGTTGAATAGCAA+TGG | - | chr1.3:75646519-75646538 | MS.gene71838:CDS | 30.0% |
| !!! | TTTTGTTGTTTGTGAGTCAT+AGG | + | chr1.3:75645608-75645627 | None:intergenic | 30.0% |
| AACAAAACACCATGTGCATT+AGG | + | chr1.3:75646507-75646526 | None:intergenic | 35.0% | |
| AACTATGAGGCTCATATTAG+TGG | - | chr1.3:75648540-75648559 | MS.gene71838:CDS | 35.0% | |
| AAGAAGGAACTGTGAAAGTT+TGG | - | chr1.3:75649018-75649037 | MS.gene71838:CDS | 35.0% | |
| AAGTCCACAAAAATTGGTCA+AGG | - | chr1.3:75645790-75645809 | MS.gene71838:CDS | 35.0% | |
| AATCAGCAAGAAATGCATTG+GGG | - | chr1.3:75648481-75648500 | MS.gene71838:CDS | 35.0% | |
| ACAAGGTGGAATGATATCAA+AGG | - | chr1.3:75648839-75648858 | MS.gene71838:intron | 35.0% | |
| ACTTGACATAGAAGCTTAGA+AGG | + | chr1.3:75645912-75645931 | None:intergenic | 35.0% | |
| AGAGAGATGGTGATAGTTTA+GGG | + | chr1.3:75647328-75647347 | None:intergenic | 35.0% | |
| AGTTATGGTGTATACCAAAG+GGG | - | chr1.3:75647694-75647713 | MS.gene71838:intron | 35.0% | |
| ATAACAGACACATGCCATAT+AGG | + | chr1.3:75646998-75647017 | None:intergenic | 35.0% | |
| ATACTGATGGTTGGAATGAA+GGG | - | chr1.3:75649224-75649243 | MS.gene71838:CDS | 35.0% | |
| ATAGGTACCATTGAGATAGA+TGG | - | chr1.3:75649128-75649147 | MS.gene71838:intron | 35.0% | |
| ATCATACCAAAAGCCCAATA+AGG | + | chr1.3:75646684-75646703 | None:intergenic | 35.0% | |
| ATCCTAAAACAGTTTCTTGG+TGG | - | chr1.3:75647806-75647825 | MS.gene71838:intron | 35.0% | |
| ATGGATCTTAGAAATGAAGG+TGG | - | chr1.3:75646477-75646496 | MS.gene71838:CDS | 35.0% | |
| CAACATCTTCTACAACAGAT+AGG | + | chr1.3:75647480-75647499 | None:intergenic | 35.0% | |
| CAAGAACAGGAGAAATCATT+AGG | + | chr1.3:75648653-75648672 | None:intergenic | 35.0% | |
| CAGTTATGGTGTATACCAAA+GGG | - | chr1.3:75647693-75647712 | MS.gene71838:intron | 35.0% | |
| CATATATCTGAACCAACCAT+TGG | + | chr1.3:75648327-75648346 | None:intergenic | 35.0% | |
| CATCAAAAGAGACCATGTAT+TGG | - | chr1.3:75647246-75647265 | MS.gene71838:CDS | 35.0% | |
| CCCTACAAAATTAATGCTTC+AGG | - | chr1.3:75648021-75648040 | MS.gene71838:intron | 35.0% | |
| CTCTTAATGTTCTGCTTCAA+AGG | + | chr1.3:75646114-75646133 | None:intergenic | 35.0% | |
| CTGATGCAAAGAACAAAAGA+TGG | - | chr1.3:75646049-75646068 | MS.gene71838:CDS | 35.0% | |
| CTGGAAAGAATACACAACAT+TGG | - | chr1.3:75647625-75647644 | MS.gene71838:intron | 35.0% | |
| CTTGACATAGAAGCTTAGAA+GGG | + | chr1.3:75645911-75645930 | None:intergenic | 35.0% | |
| GAATCAGCAAGAAATGCATT+GGG | - | chr1.3:75648480-75648499 | MS.gene71838:CDS | 35.0% | |
| GACATACAAGATTATTGGAG+GGG | - | chr1.3:75646572-75646591 | MS.gene71838:CDS | 35.0% | |
| GTCTCATGCCTTAAAAATCA+AGG | + | chr1.3:75646003-75646022 | None:intergenic | 35.0% | |
| GTTGTTGAATAGCAATGGAA+TGG | - | chr1.3:75646524-75646543 | MS.gene71838:CDS | 35.0% | |
| TACAGGACTTCTACAAGTTA+AGG | - | chr1.3:75645855-75645874 | MS.gene71838:CDS | 35.0% | |
| TACTGATCAACAACACTAAG+AGG | + | chr1.3:75646630-75646649 | None:intergenic | 35.0% | |
| TAGACAAGAACTTTACCAGT+GGG | - | chr1.3:75648446-75648465 | MS.gene71838:CDS | 35.0% | |
| TAGAGAGATGGTGATAGTTT+AGG | + | chr1.3:75647329-75647348 | None:intergenic | 35.0% | |
| TAGGTACCATTGAGATAGAT+GGG | - | chr1.3:75649129-75649148 | MS.gene71838:intron | 35.0% | |
| TAGTTTAGGGACTAAAGTGA+TGG | + | chr1.3:75647315-75647334 | None:intergenic | 35.0% | |
| TATTGTATATATCGGTAGGG+AGG | - | chr1.3:75647136-75647155 | MS.gene71838:CDS | 35.0% | |
| TCCTAAAACAGTTTCTTGGT+GGG | - | chr1.3:75647807-75647826 | MS.gene71838:intron | 35.0% | |
| TCTAATGACTCAGACACATT+TGG | - | chr1.3:75646261-75646280 | MS.gene71838:CDS | 35.0% | |
| TCTATTCAAGATGACCCTAA+TGG | - | chr1.3:75645826-75645845 | MS.gene71838:CDS | 35.0% | |
| TCTCCAAAGTCCACAAAAAT+TGG | - | chr1.3:75645784-75645803 | MS.gene71838:CDS | 35.0% | |
| TGCTTTCTATCCATTCTCAA+GGG | - | chr1.3:75648401-75648420 | MS.gene71838:CDS | 35.0% | |
| TGTGTCTGAGTCATTAGAAT+TGG | + | chr1.3:75646259-75646278 | None:intergenic | 35.0% | |
| TTAATGTTCTGCTTCAAAGG+TGG | + | chr1.3:75646111-75646130 | None:intergenic | 35.0% | |
| TTATGTGCAGAGCAATTTGT+GGG | - | chr1.3:75647014-75647033 | MS.gene71838:CDS | 35.0% | |
| TTGACATAGAAGCTTAGAAG+GGG | + | chr1.3:75645910-75645929 | None:intergenic | 35.0% | |
| TTTCATGCAAGTGTGAAAGA+AGG | - | chr1.3:75649002-75649021 | MS.gene71838:CDS | 35.0% | |
| ! | AATGATGATGATCACATGGA+TGG | - | chr1.3:75647544-75647563 | MS.gene71838:intron | 35.0% |
| ! | AGTCCACTATAATGGCATTT+TGG | - | chr1.3:75648086-75648105 | MS.gene71838:intron | 35.0% |
| ! | AGTTTGCTTTGGATAAAGGT+TGG | - | chr1.3:75649060-75649079 | MS.gene71838:intron | 35.0% |
| ! | ATAGTTTAGGGTGTACAGAT+AGG | + | chr1.3:75648526-75648545 | None:intergenic | 35.0% |
| ! | ATGGAATGATGATGATCACA+TGG | - | chr1.3:75647540-75647559 | MS.gene71838:intron | 35.0% |
| ! | ATGGTTGGTTCAGATATATG+TGG | - | chr1.3:75648327-75648346 | MS.gene71838:CDS | 35.0% |
| ! | ATTGCTGTTAACTCCAGTTA+TGG | - | chr1.3:75647679-75647698 | MS.gene71838:intron | 35.0% |
| ! | CAATGCATTTCTTGCTGATT+CGG | + | chr1.3:75648481-75648500 | None:intergenic | 35.0% |
| ! | GAAATCTGAGATTGTGATGA+TGG | - | chr1.3:75646867-75646886 | MS.gene71838:CDS | 35.0% |
| ! | GGAATGGATGTGTTTTACAA+AGG | - | chr1.3:75646540-75646559 | MS.gene71838:CDS | 35.0% |
| ! | GTAACCTTGACCAATTTTTG+TGG | + | chr1.3:75645797-75645816 | None:intergenic | 35.0% |
| ! | GTTTGCTTTGGATAAAGGTT+GGG | - | chr1.3:75649061-75649080 | MS.gene71838:intron | 35.0% |
| ! | TAGTTTAGGGTGTACAGATA+GGG | + | chr1.3:75648525-75648544 | None:intergenic | 35.0% |
| ! | TCCTTATGATCTTTTGCCTA+GGG | - | chr1.3:75646077-75646096 | MS.gene71838:CDS | 35.0% |
| ! | TGACCAATTTTTGTGGACTT+TGG | + | chr1.3:75645790-75645809 | None:intergenic | 35.0% |
| ! | TTCCTTATGATCTTTTGCCT+AGG | - | chr1.3:75646076-75646095 | MS.gene71838:CDS | 35.0% |
| !! | ATATTTTAAGTCACGGGACT+TGG | - | chr1.3:75646972-75646991 | MS.gene71838:CDS | 35.0% |
| !! | CTTTGAAGCAGAACATTAAG+AGG | - | chr1.3:75646112-75646131 | MS.gene71838:CDS | 35.0% |
| !! | GAAGCATTAATTTTGTAGGG+AGG | + | chr1.3:75648021-75648040 | None:intergenic | 35.0% |
| !! | GTAAAAGTTTTGCTATGACC+TGG | - | chr1.3:75649264-75649283 | MS.gene71838:CDS | 35.0% |
| !! | TATTGGTCTTTGAAAACCAG+TGG | + | chr1.3:75646288-75646307 | None:intergenic | 35.0% |
| AAACTATACCATGTTCCAGG+TGG | + | chr1.3:75648708-75648727 | None:intergenic | 40.0% | |
| AAATGTCACAATGAGGCTGA+AGG | + | chr1.3:75648880-75648899 | None:intergenic | 40.0% | |
| AACCATTCTTGGCTCAAGTT+TGG | - | chr1.3:75647752-75647771 | MS.gene71838:intron | 40.0% | |
| AAGAAAAGAGGCCTAGCAAT+TGG | + | chr1.3:75648570-75648589 | None:intergenic | 40.0% | |
| AAGGGCTTAAATATCCCTGT+AGG | - | chr1.3:75649242-75649261 | MS.gene71838:CDS | 40.0% | |
| AAGGTAAGAGAGACAAAGAG+TGG | + | chr1.3:75645719-75645738 | None:intergenic | 40.0% | |
| AATAAGTGAGCATGTTGGTC+AGG | + | chr1.3:75647408-75647427 | None:intergenic | 40.0% | |
| AATGTCACAATGAGGCTGAA+GGG | + | chr1.3:75648879-75648898 | None:intergenic | 40.0% | |
| ACAAGTGCAGTCCACTATAA+TGG | - | chr1.3:75648078-75648097 | MS.gene71838:intron | 40.0% | |
| ACCATTCTACCAATGCAACA+AGG | - | chr1.3:75648822-75648841 | MS.gene71838:intron | 40.0% | |
| AGAAAAGAGGCCTAGCAATT+GGG | + | chr1.3:75648569-75648588 | None:intergenic | 40.0% | |
| AGAACCAACATAAGTAGAGC+GGG | + | chr1.3:75648205-75648224 | None:intergenic | 40.0% | |
| AGATGCTTCTCTGTATGGTT+TGG | - | chr1.3:75646335-75646354 | MS.gene71838:CDS | 40.0% | |
| ATCATTCCACCTTGTTGCAT+TGG | + | chr1.3:75648834-75648853 | None:intergenic | 40.0% | |
| ATGAGACTGAGAATCGTTTG+AGG | - | chr1.3:75646016-75646035 | MS.gene71838:CDS | 40.0% | |
| ATTAATGGCTGCTACATCAG+TGG | + | chr1.3:75646421-75646440 | None:intergenic | 40.0% | |
| ATTCTACCAATGCAACAAGG+TGG | - | chr1.3:75648825-75648844 | MS.gene71838:intron | 40.0% | |
| ATTTCTCCTGTTCTTGAGCA+AGG | - | chr1.3:75648657-75648676 | MS.gene71838:CDS | 40.0% | |
| CAAAATTACATACACGGACG+AGG | - | chr1.3:75649185-75649204 | MS.gene71838:intron | 40.0% | |
| CAAATGAAGGAGAGGCTAAA+GGG | - | chr1.3:75648910-75648929 | MS.gene71838:CDS | 40.0% | |
| CAATCCATAAGCCATCAACT+GGG | + | chr1.3:75647864-75647883 | None:intergenic | 40.0% | |
| CACTGGTAAAGTTCTTGTCT+AGG | + | chr1.3:75648447-75648466 | None:intergenic | 40.0% | |
| CAGAACCAACATAAGTAGAG+CGG | + | chr1.3:75648206-75648225 | None:intergenic | 40.0% | |
| CATACTGATGGTTGGAATGA+AGG | - | chr1.3:75649223-75649242 | MS.gene71838:CDS | 40.0% | |
| CCAGAAATGAAGCTTGGAAA+TGG | - | chr1.3:75648960-75648979 | MS.gene71838:CDS | 40.0% | |
| CCAGTTATGGTGTATACCAA+AGG | - | chr1.3:75647692-75647711 | MS.gene71838:intron | 40.0% | |
| CCATTTCCAAGCTTCATTTC+TGG | + | chr1.3:75648963-75648982 | None:intergenic | 40.0% | |
| CCTAAAACAGTTTCTTGGTG+GGG | - | chr1.3:75647808-75647827 | MS.gene71838:intron | 40.0% | |
| CCTTTGGTATACACCATAAC+TGG | + | chr1.3:75647695-75647714 | None:intergenic | 40.0% | |
| CGAATCAGCAAGAAATGCAT+TGG | - | chr1.3:75648479-75648498 | MS.gene71838:CDS | 40.0% | |
| CTAGACAAGAACTTTACCAG+TGG | - | chr1.3:75648445-75648464 | MS.gene71838:CDS | 40.0% | |
| CTATTGCAAAGCTCTTCAGT+GGG | + | chr1.3:75648366-75648385 | None:intergenic | 40.0% | |
| GAAAAGGACATACTGATGGT+TGG | - | chr1.3:75649215-75649234 | MS.gene71838:intron | 40.0% | |
| GAACTTCCAGAAATGAAGCT+TGG | - | chr1.3:75648954-75648973 | MS.gene71838:CDS | 40.0% | |
| GAAGCTTCAAATTTCTGCTC+TGG | - | chr1.3:75647892-75647911 | MS.gene71838:intron | 40.0% | |
| GAGAGACAAAGAGTGGATAA+TGG | + | chr1.3:75645712-75645731 | None:intergenic | 40.0% | |
| GATCAGTACACTTCCTTCAT+TGG | - | chr1.3:75646642-75646661 | MS.gene71838:CDS | 40.0% | |
| GATGCTTCTCTGTATGGTTT+GGG | - | chr1.3:75646336-75646355 | MS.gene71838:CDS | 40.0% | |
| GCAAAAACATCACAAGCACA+CGG | - | chr1.3:75647986-75648005 | MS.gene71838:intron | 40.0% | |
| GGATACAACTTTATCCCATG+TGG | + | chr1.3:75646375-75646394 | None:intergenic | 40.0% | |
| GGCATTGTCTCGTGATTTAT+GGG | - | chr1.3:75647107-75647126 | MS.gene71838:CDS | 40.0% | |
| GTAGAGCGGGTCAAAATAAA+AGG | + | chr1.3:75648192-75648211 | None:intergenic | 40.0% | |
| GTGCTTTCTATCCATTCTCA+AGG | - | chr1.3:75648400-75648419 | MS.gene71838:CDS | 40.0% | |
| GTTATGTGCAGAGCAATTTG+TGG | - | chr1.3:75647013-75647032 | MS.gene71838:CDS | 40.0% | |
| GTTGGGAATGAGAAGAAAAG+AGG | + | chr1.3:75648582-75648601 | None:intergenic | 40.0% | |
| TAAGCACCCAATTCTTGCTT+GGG | - | chr1.3:75648622-75648641 | MS.gene71838:CDS | 40.0% | |
| TCAAACCATTGCAACTCACA+AGG | - | chr1.3:75648140-75648159 | MS.gene71838:CDS | 40.0% | |
| TCAATCCATAAGCCATCAAC+TGG | + | chr1.3:75647865-75647884 | None:intergenic | 40.0% | |
| TCAGGATTACAAGCTCCTAT+AGG | - | chr1.3:75648039-75648058 | MS.gene71838:intron | 40.0% | |
| TCCCTAGGCAAAAGATCATA+AGG | + | chr1.3:75646081-75646100 | None:intergenic | 40.0% | |
| TCTAAGCAACATATCCAACC+AGG | + | chr1.3:75647964-75647983 | None:intergenic | 40.0% | |
| TCTGTACACCCTAAACTATG+AGG | - | chr1.3:75648527-75648546 | MS.gene71838:CDS | 40.0% | |
| TGAACATTGACCACATGCAA+GGG | + | chr1.3:75648789-75648808 | None:intergenic | 40.0% | |
| TGAGACTGAGAATCGTTTGA+GGG | - | chr1.3:75646017-75646036 | MS.gene71838:CDS | 40.0% | |
| TGGAGAAAAGGACATACTGA+TGG | - | chr1.3:75649211-75649230 | MS.gene71838:intron | 40.0% | |
| TGGCATTGTCTCGTGATTTA+TGG | - | chr1.3:75647106-75647125 | MS.gene71838:CDS | 40.0% | |
| TGGGTAGTTAACTGGATTGA+GGG | + | chr1.3:75647584-75647603 | None:intergenic | 40.0% | |
| TGGTTTCCCATCTATCTCAA+TGG | + | chr1.3:75649138-75649157 | None:intergenic | 40.0% | |
| TTCAAGGGCTTCAAGGAAAA+AGG | - | chr1.3:75648166-75648185 | MS.gene71838:CDS | 40.0% | |
| TTTCTCCTGTTCTTGAGCAA+GGG | - | chr1.3:75648658-75648677 | MS.gene71838:CDS | 40.0% | |
| TTTGGATGTGGGTAGTTAAC+TGG | + | chr1.3:75647592-75647611 | None:intergenic | 40.0% | |
| ! | ACCTTGTTGCATTGGTAGAA+TGG | + | chr1.3:75648826-75648845 | None:intergenic | 40.0% |
| ! | GGCAAGTTTGCTTTGGATAA+AGG | - | chr1.3:75649056-75649075 | MS.gene71838:intron | 40.0% |
| ! | TAGGAGAGTAGTAGTTTGCA+TGG | + | chr1.3:75648428-75648447 | None:intergenic | 40.0% |
| ! | TTTGCTATGACCTGGAAGAT+GGG | - | chr1.3:75649272-75649291 | MS.gene71838:CDS | 40.0% |
| ! | TTTTCCTTGAAGCCCTTGAA+GGG | + | chr1.3:75648166-75648185 | None:intergenic | 40.0% |
| ! | TTTTTCCTTGAAGCCCTTGA+AGG | + | chr1.3:75648167-75648186 | None:intergenic | 40.0% |
| !! | ACCATACAGAGAAGCATCTT+TGG | + | chr1.3:75646334-75646353 | None:intergenic | 40.0% |
| !! | ACTTTTGAGTAAGGCAGCAT+GGG | + | chr1.3:75645664-75645683 | None:intergenic | 40.0% |
| !! | ATTATAGTGGACTGCACTTG+TGG | + | chr1.3:75648079-75648098 | None:intergenic | 40.0% |
| !! | CCATACAGAGAAGCATCTTT+GGG | + | chr1.3:75646333-75646352 | None:intergenic | 40.0% |
| !! | GTCAAAAAGAGTATCACCAG+TGG | + | chr1.3:75646235-75646254 | None:intergenic | 40.0% |
| !! | TGCAATAGGTGGATTGAAGT+TGG | - | chr1.3:75648378-75648397 | MS.gene71838:CDS | 40.0% |
| !! | TTTTGCTATGACCTGGAAGA+TGG | - | chr1.3:75649271-75649290 | MS.gene71838:CDS | 40.0% |
| AAAACATCACAAGCACACGG+TGG | - | chr1.3:75647989-75648008 | MS.gene71838:intron | 45.0% | |
| AAACATCACAAGCACACGGT+GGG | - | chr1.3:75647990-75648009 | MS.gene71838:intron | 45.0% | |
| AAAGTCCAAAGTCACGCGTA+AGG | - | chr1.3:75645574-75645593 | MS.gene71838:CDS | 45.0% | |
| AAATATGCAGCGCATTGGAC+AGG | - | chr1.3:75648228-75648247 | MS.gene71838:CDS | 45.0% | |
| AAGCTTAGAAGGGGAATGTC+TGG | + | chr1.3:75645901-75645920 | None:intergenic | 45.0% | |
| ACATGAGGGTGAACCATTCT+TGG | - | chr1.3:75647741-75647760 | MS.gene71838:intron | 45.0% | |
| AGAACTTTACCAGTGGGAGA+CGG | - | chr1.3:75648452-75648471 | MS.gene71838:CDS | 45.0% | |
| AGGATTCCACCAATGCAGAT+GGG | - | chr1.3:75647444-75647463 | MS.gene71838:intron | 45.0% | |
| AGGTGACAATCAGGGTACAT+GGG | - | chr1.3:75648248-75648267 | MS.gene71838:CDS | 45.0% | |
| AGTCCTGTAATAGCGCCATT+AGG | + | chr1.3:75645844-75645863 | None:intergenic | 45.0% | |
| AGTTTGGTCACAAGTCCAAG+AGG | - | chr1.3:75649034-75649053 | MS.gene71838:intron | 45.0% | |
| ATCAACAACACTAAGAGGCG+TGG | + | chr1.3:75646625-75646644 | None:intergenic | 45.0% | |
| ATGTTCTGCTTCAAAGGTGG+TGG | + | chr1.3:75646108-75646127 | None:intergenic | 45.0% | |
| ATTCTTGGCTCAAGTTTGGC+CGG | - | chr1.3:75647756-75647775 | MS.gene71838:intron | 45.0% | |
| CAAAGTCACGCGTAAGGTAA+TGG | - | chr1.3:75645580-75645599 | MS.gene71838:CDS | 45.0% | |
| CAAGAAATGCATTGGGGATG+AGG | - | chr1.3:75648487-75648506 | MS.gene71838:CDS | 45.0% | |
| CATCAACTGGGACAAGTTCA+TGG | + | chr1.3:75647852-75647871 | None:intergenic | 45.0% | |
| CATCATTAGCCATACCCCTT+TGG | + | chr1.3:75647711-75647730 | None:intergenic | 45.0% | |
| CATGAACTTGTCCCAGTTGA+TGG | - | chr1.3:75647850-75647869 | MS.gene71838:intron | 45.0% | |
| CATTACCTTACGCGTGACTT+TGG | + | chr1.3:75645582-75645601 | None:intergenic | 45.0% | |
| CATTGGACAGGTGACAATCA+GGG | - | chr1.3:75648240-75648259 | MS.gene71838:CDS | 45.0% | |
| CCAAAAGCCCAATAAGGCAT+TGG | + | chr1.3:75646678-75646697 | None:intergenic | 45.0% | |
| CCACTGAAGAGCTTTGCAAT+AGG | - | chr1.3:75648364-75648383 | MS.gene71838:CDS | 45.0% | |
| CCCAAAGATGCTTCTCTGTA+TGG | - | chr1.3:75646330-75646349 | MS.gene71838:CDS | 45.0% | |
| CCTATTGCAAAGCTCTTCAG+TGG | + | chr1.3:75648367-75648386 | None:intergenic | 45.0% | |
| CTAAGCACCCAATTCTTGCT+TGG | - | chr1.3:75648621-75648640 | MS.gene71838:CDS | 45.0% | |
| CTCATTGTGACATTTCCAGC+AGG | - | chr1.3:75648885-75648904 | MS.gene71838:CDS | 45.0% | |
| CTGAAGAGCTTTGCAATAGG+TGG | - | chr1.3:75648367-75648386 | MS.gene71838:CDS | 45.0% | |
| CTGCTGGAAATGTCACAATG+AGG | + | chr1.3:75648887-75648906 | None:intergenic | 45.0% | |
| CTGGAGTTAACAGCAATACC+AGG | + | chr1.3:75647676-75647695 | None:intergenic | 45.0% | |
| GAAAAGAGGCCTAGCAATTG+GGG | + | chr1.3:75648568-75648587 | None:intergenic | 45.0% | |
| GCAAATGAAGGAGAGGCTAA+AGG | - | chr1.3:75648909-75648928 | MS.gene71838:CDS | 45.0% | |
| GCAGTTAAAAGGAAGTCCAC+TGG | - | chr1.3:75646216-75646235 | MS.gene71838:CDS | 45.0% | |
| GGTAAGTGCACAATTCCTAC+AGG | - | chr1.3:75647913-75647932 | MS.gene71838:intron | 45.0% | |
| GTCCTGTAATAGCGCCATTA+GGG | + | chr1.3:75645843-75645862 | None:intergenic | 45.0% | |
| GTGAACATTGACCACATGCA+AGG | + | chr1.3:75648790-75648809 | None:intergenic | 45.0% | |
| GTGCACAATTCCTACAGGAA+AGG | - | chr1.3:75647918-75647937 | MS.gene71838:intron | 45.0% | |
| GTGGGTAGTTAACTGGATTG+AGG | + | chr1.3:75647585-75647604 | None:intergenic | 45.0% | |
| GTTTGGTCACAAGTCCAAGA+GGG | - | chr1.3:75649035-75649054 | MS.gene71838:intron | 45.0% | |
| TACGCGTGACTTTGGACTTT+AGG | + | chr1.3:75645574-75645593 | None:intergenic | 45.0% | |
| TAGGATTCCACCAATGCAGA+TGG | - | chr1.3:75647443-75647462 | MS.gene71838:intron | 45.0% | |
| TGATCACATGGATGGACACA+AGG | - | chr1.3:75647552-75647571 | MS.gene71838:intron | 45.0% | |
| TGGTGTATACCAAAGGGGTA+TGG | - | chr1.3:75647699-75647718 | MS.gene71838:intron | 45.0% | |
| TGTGATAACCCCATCTGCAT+TGG | + | chr1.3:75647456-75647475 | None:intergenic | 45.0% | |
| TTGACCCGCTCTACTTATGT+TGG | - | chr1.3:75648198-75648217 | MS.gene71838:CDS | 45.0% | |
| TTTCCAGCAGGTGCAAATGA+AGG | - | chr1.3:75648897-75648916 | MS.gene71838:CDS | 45.0% | |
| TTTGCATGGTCCCTTGAGAA+TGG | + | chr1.3:75648414-75648433 | None:intergenic | 45.0% | |
| ! | ACCAGCTCCAATGCCTTATT+GGG | - | chr1.3:75646668-75646687 | MS.gene71838:CDS | 45.0% |
| ! | ATATTTGGGGTGCCAATGGT+TGG | - | chr1.3:75648312-75648331 | MS.gene71838:CDS | 45.0% |
| ! | CACATGCAAGGGTGCATTAA+GGG | + | chr1.3:75648778-75648797 | None:intergenic | 45.0% |
| ! | CCCCACCAAGAAACTGTTTT+AGG | + | chr1.3:75647811-75647830 | None:intergenic | 45.0% |
| ! | CTCAAAAGTGTGTGCTGCTA+TGG | - | chr1.3:75645675-75645694 | MS.gene71838:CDS | 45.0% |
| ! | GTTTTCCCTTGCTCAAGAAC+AGG | + | chr1.3:75648666-75648685 | None:intergenic | 45.0% |
| ! | TCAACAACACTAAGAGGCGT+GGG | + | chr1.3:75646624-75646643 | None:intergenic | 45.0% |
| ! | TGGAATATTTGGGGTGCCAA+TGG | - | chr1.3:75648308-75648327 | MS.gene71838:CDS | 45.0% |
| !! | ACTTTTGATGATAGGGCTCG+TGG | - | chr1.3:75646897-75646916 | MS.gene71838:CDS | 45.0% |
| !! | CACTTTTGAGTAAGGCAGCA+TGG | + | chr1.3:75645665-75645684 | None:intergenic | 45.0% |
| !! | CCAATGCCTTATTGGGCTTT+TGG | - | chr1.3:75646675-75646694 | MS.gene71838:CDS | 45.0% |
| !! | CGCTCTACTTATGTTGGTTC+TGG | - | chr1.3:75648204-75648223 | MS.gene71838:CDS | 45.0% |
| !! | GCAGCACACACTTTTGAGTA+AGG | + | chr1.3:75645673-75645692 | None:intergenic | 45.0% |
| !! | TTGTCCCAGTTGATGGCTTA+TGG | - | chr1.3:75647857-75647876 | MS.gene71838:intron | 45.0% |
| AACCAGGTCCTGTTCCACTT+GGG | + | chr1.3:75647948-75647967 | None:intergenic | 50.0% | |
| AGCAGGTGCAAATGAAGGAG+AGG | - | chr1.3:75648902-75648921 | MS.gene71838:CDS | 50.0% | |
| CAACTCACAAGGCCCTTCAA+GGG | - | chr1.3:75648151-75648170 | MS.gene71838:CDS | 50.0% | |
| CACTCTTTCCACCTGGAACA+TGG | - | chr1.3:75648697-75648716 | MS.gene71838:CDS | 50.0% | |
| CAGGTGACAATCAGGGTACA+TGG | - | chr1.3:75648247-75648266 | MS.gene71838:CDS | 50.0% | |
| CCAAAGCAAACTTGCCCTCT+TGG | + | chr1.3:75649052-75649071 | None:intergenic | 50.0% | |
| CCTTAATGCACCCTTGCATG+TGG | - | chr1.3:75648776-75648795 | MS.gene71838:intron | 50.0% | |
| CTCACACCACAGGGATAGAA+TGG | - | chr1.3:75645531-75645550 | MS.gene71838:CDS | 50.0% | |
| CTCAGACACATTTGGTCCAC+TGG | - | chr1.3:75646269-75646288 | MS.gene71838:CDS | 50.0% | |
| CTGGCAAATATGCAGCGCAT+TGG | - | chr1.3:75648223-75648242 | MS.gene71838:CDS | 50.0% | |
| CTGGGACAAGTTCATGGAAG+CGG | + | chr1.3:75647846-75647865 | None:intergenic | 50.0% | |
| GACCAGCTCCAATGCCTTAT+TGG | - | chr1.3:75646667-75646686 | MS.gene71838:CDS | 50.0% | |
| GACCCTAATGGCGCTATTAC+AGG | - | chr1.3:75645838-75645857 | MS.gene71838:CDS | 50.0% | |
| GAGAGAACACACAGCCACAT+GGG | - | chr1.3:75646358-75646377 | MS.gene71838:CDS | 50.0% | |
| GATAACCCCATCTGCATTGG+TGG | + | chr1.3:75647453-75647472 | None:intergenic | 50.0% | |
| GCATTGGACAGGTGACAATC+AGG | - | chr1.3:75648239-75648258 | MS.gene71838:CDS | 50.0% | |
| GCGTGACTTTGGACTTTAGG+AGG | + | chr1.3:75645571-75645590 | None:intergenic | 50.0% | |
| GCTGCTCCCAAGCAAGAATT+GGG | + | chr1.3:75648631-75648650 | None:intergenic | 50.0% | |
| GGATTCCACCAATGCAGATG+GGG | - | chr1.3:75647445-75647464 | MS.gene71838:intron | 50.0% | |
| GGCCAAACTTGAGCCAAGAA+TGG | + | chr1.3:75647757-75647776 | None:intergenic | 50.0% | |
| GTTGATGCACTCTTTCCACC+TGG | - | chr1.3:75648690-75648709 | MS.gene71838:CDS | 50.0% | |
| TACATACACGGACGAGGAGA+TGG | - | chr1.3:75649191-75649210 | MS.gene71838:intron | 50.0% | |
| TCTCCTTCATTTGCACCTGC+TGG | + | chr1.3:75648903-75648922 | None:intergenic | 50.0% | |
| TGGGTCTCACCCTGTATACA+TGG | - | chr1.3:75646458-75646477 | MS.gene71838:CDS | 50.0% | |
| TTAGTGGAGCCCCAATTGCT+AGG | - | chr1.3:75648556-75648575 | MS.gene71838:CDS | 50.0% | |
| TTCTATCCCTGTGGTGTGAG+TGG | + | chr1.3:75645531-75645550 | None:intergenic | 50.0% | |
| TTCTTGGCTCAAGTTTGGCC+GGG | - | chr1.3:75647757-75647776 | MS.gene71838:intron | 50.0% | |
| TTGAGTAAGGCAGCATGGGA+GGG | + | chr1.3:75645660-75645679 | None:intergenic | 50.0% | |
| TTTAGGAGGATCACGCGTGT+GGG | + | chr1.3:75645557-75645576 | None:intergenic | 50.0% | |
| TTTGAGTAAGGCAGCATGGG+AGG | + | chr1.3:75645661-75645680 | None:intergenic | 50.0% | |
| ! | AAGGGCCTTGTGAGTTGCAA+TGG | + | chr1.3:75648148-75648167 | None:intergenic | 50.0% |
| ! | CCAAGAGGGCAAGTTTGCTT+TGG | - | chr1.3:75649049-75649068 | MS.gene71838:intron | 50.0% |
| ! | CCACATGCAAGGGTGCATTA+AGG | + | chr1.3:75648779-75648798 | None:intergenic | 50.0% |
| ! | TCAGGAAAGTACACTGCTCC+CGG | + | chr1.3:75647778-75647797 | None:intergenic | 50.0% |
| ! | TGGAGCTGGTCTACCAATGA+AGG | + | chr1.3:75646658-75646677 | None:intergenic | 50.0% |
| !! | CAAAGCTCTTCAGTGGGTTG+TGG | + | chr1.3:75648360-75648379 | None:intergenic | 50.0% |
| AAGGCCCTTCAAGGGCTTCA+AGG | - | chr1.3:75648159-75648178 | MS.gene71838:CDS | 55.0% | |
| AAGGTGTGCCCAAGTGGAAC+AGG | - | chr1.3:75647937-75647956 | MS.gene71838:intron | 55.0% | |
| CAACCAGGTCCTGTTCCACT+TGG | + | chr1.3:75647949-75647968 | None:intergenic | 55.0% | |
| CAAGTGGAACAGGACCTGGT+TGG | - | chr1.3:75647947-75647966 | MS.gene71838:intron | 55.0% | |
| CGGACGAGGAGATGGAGAAA+AGG | - | chr1.3:75649199-75649218 | MS.gene71838:intron | 55.0% | |
| CTTGGGCACACCTTTCCTGT+AGG | + | chr1.3:75647931-75647950 | None:intergenic | 55.0% | |
| GCAACTCACAAGGCCCTTCA+AGG | - | chr1.3:75648150-75648169 | MS.gene71838:CDS | 55.0% | |
| GGAGAGAACACACAGCCACA+TGG | - | chr1.3:75646357-75646376 | MS.gene71838:CDS | 55.0% | |
| GGCTGCTCCCAAGCAAGAAT+TGG | + | chr1.3:75648632-75648651 | None:intergenic | 55.0% | |
| GGGTGCATTAAGGGTCACGT+TGG | + | chr1.3:75648769-75648788 | None:intergenic | 55.0% | |
| GGTGGCAAGCCTAATGCACA+TGG | - | chr1.3:75646495-75646514 | MS.gene71838:CDS | 55.0% | |
| GTCACGGGACTTGGCCTATA+TGG | - | chr1.3:75646981-75647000 | MS.gene71838:CDS | 55.0% | |
| TGTGGGCCATTCTATCCCTG+TGG | + | chr1.3:75645540-75645559 | None:intergenic | 55.0% | |
| ! | AAAGGTGGTGGTTGCTCCCT+AGG | + | chr1.3:75646096-75646115 | None:intergenic | 55.0% |
| ! | ACAGGAAAGGTGTGCCCAAG+TGG | - | chr1.3:75647931-75647950 | MS.gene71838:intron | 55.0% |
| ! | CTTTAGGAGGATCACGCGTG+TGG | + | chr1.3:75645558-75645577 | None:intergenic | 55.0% |
| !! | GCCCAATAAGGCATTGGAGC+TGG | + | chr1.3:75646672-75646691 | None:intergenic | 55.0% |
| ATTCGGCTACCGTCTCCCAC+TGG | + | chr1.3:75648464-75648483 | None:intergenic | 60.0% | |
| GTGGGTCCACTCACACCACA+GGG | - | chr1.3:75645522-75645541 | MS.gene71838:CDS | 60.0% | |
| TGCCCAAGTGGAACAGGACC+TGG | - | chr1.3:75647943-75647962 | MS.gene71838:intron | 60.0% | |
| GGTGGGTCCACTCACACCAC+AGG | - | chr1.3:75645521-75645540 | MS.gene71838:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75645506 | 75649301 | 75645506 | ID=MS.gene71838 |
| chr1.3 | mRNA | 75645506 | 75649301 | 75645506 | ID=MS.gene71838.t1;Parent=MS.gene71838 |
| chr1.3 | exon | 75649217 | 75649301 | 75649217 | ID=MS.gene71838.t1.exon1;Parent=MS.gene71838.t1 |
| chr1.3 | CDS | 75649217 | 75649301 | 75649217 | ID=cds.MS.gene71838.t1;Parent=MS.gene71838.t1 |
| chr1.3 | exon | 75648878 | 75649043 | 75648878 | ID=MS.gene71838.t1.exon2;Parent=MS.gene71838.t1 |
| chr1.3 | CDS | 75648878 | 75649043 | 75648878 | ID=cds.MS.gene71838.t1;Parent=MS.gene71838.t1 |
| chr1.3 | exon | 75648111 | 75648793 | 75648111 | ID=MS.gene71838.t1.exon3;Parent=MS.gene71838.t1 |
| chr1.3 | CDS | 75648111 | 75648793 | 75648111 | ID=cds.MS.gene71838.t1;Parent=MS.gene71838.t1 |
| chr1.3 | exon | 75645506 | 75647361 | 75645506 | ID=MS.gene71838.t1.exon4;Parent=MS.gene71838.t1 |
| chr1.3 | CDS | 75645506 | 75647361 | 75645506 | ID=cds.MS.gene71838.t1;Parent=MS.gene71838.t1 |
| Gene Sequence |
| Protein sequence |
