Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71839.t1 | XP_013470188.1 | 95.8 | 939 | 33 | 3 | 1 | 934 | 1 | 938 | 0.00E+00 | 1860.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71839.t1 | Q9S7Y7 | 71.3 | 928 | 242 | 9 | 8 | 933 | 8 | 913 | 0.0e+00 | 1395.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71839.t1 | A0A072VRC0 | 95.8 | 939 | 33 | 3 | 1 | 934 | 1 | 938 | 0.0e+00 | 1860.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene71839 | MS.gene02726 | PPI |
MS.gene00023 | MS.gene71839 | PPI |
MS.gene71839 | MS.gene027805 | PPI |
MS.gene71839 | MS.gene070893 | PPI |
MS.gene047991 | MS.gene71839 | PPI |
MS.gene71839 | MS.gene00027 | PPI |
MS.gene71839 | MS.gene068597 | PPI |
MS.gene71839 | MS.gene047493 | PPI |
MS.gene069133 | MS.gene71839 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71839.t1 | MTR_1g111000 | 95.847 | 939 | 33 | 3 | 1 | 934 | 1 | 938 | 0.0 | 1856 |
MS.gene71839.t1 | MTR_1g110980 | 84.158 | 909 | 126 | 6 | 27 | 934 | 34 | 925 | 0.0 | 1573 |
MS.gene71839.t1 | MTR_5g057990 | 76.406 | 907 | 202 | 3 | 27 | 933 | 32 | 926 | 0.0 | 1484 |
MS.gene71839.t1 | MTR_3g096870 | 28.199 | 805 | 448 | 25 | 66 | 813 | 77 | 808 | 1.68e-74 | 263 |
MS.gene71839.t1 | MTR_5g026610 | 29.730 | 740 | 419 | 20 | 174 | 899 | 81 | 733 | 4.07e-73 | 259 |
MS.gene71839.t1 | MTR_5g026610 | 29.730 | 740 | 419 | 20 | 174 | 899 | 144 | 796 | 4.25e-73 | 260 |
MS.gene71839.t1 | MTR_5g026610 | 29.730 | 740 | 419 | 20 | 174 | 899 | 81 | 733 | 1.34e-72 | 259 |
MS.gene71839.t1 | MTR_5g026610 | 29.730 | 740 | 419 | 20 | 174 | 899 | 144 | 796 | 1.48e-72 | 260 |
MS.gene71839.t1 | MTR_5g026610 | 29.730 | 740 | 419 | 20 | 174 | 899 | 184 | 836 | 2.32e-72 | 259 |
MS.gene71839.t1 | MTR_5g026610 | 30.087 | 575 | 313 | 15 | 335 | 899 | 2 | 497 | 1.83e-56 | 209 |
MS.gene71839.t1 | MTR_6g014900 | 64.815 | 54 | 19 | 0 | 643 | 696 | 79 | 132 | 1.17e-16 | 77.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71839.t1 | AT1G68560 | 71.429 | 917 | 237 | 9 | 18 | 933 | 21 | 913 | 0.0 | 1389 |
MS.gene71839.t1 | AT3G45940 | 64.155 | 929 | 245 | 12 | 12 | 934 | 8 | 854 | 0.0 | 1216 |
MS.gene71839.t1 | AT5G11720 | 45.281 | 943 | 453 | 14 | 2 | 932 | 10 | 901 | 0.0 | 815 |
MS.gene71839.t1 | AT5G63840 | 27.402 | 916 | 517 | 26 | 44 | 892 | 57 | 891 | 2.00e-79 | 277 |
MS.gene71839.t1 | AT5G63840 | 27.402 | 916 | 517 | 26 | 44 | 892 | 84 | 918 | 3.03e-79 | 277 |
MS.gene71839.t1 | AT3G23640 | 29.427 | 785 | 423 | 25 | 166 | 920 | 140 | 823 | 2.75e-77 | 273 |
MS.gene71839.t1 | AT3G23640 | 29.427 | 785 | 423 | 25 | 166 | 920 | 71 | 754 | 2.78e-77 | 273 |
MS.gene71839.t1 | AT3G23640 | 29.427 | 785 | 423 | 25 | 166 | 920 | 71 | 754 | 2.78e-77 | 273 |
Find 224 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCTCAACTTTGGAATATT+TGG | 0.100933 | 1.3:-75656303 | MS.gene71839:CDS |
CCATTTCCAACCTTCATTTC+TGG | 0.153089 | 1.3:+75655613 | None:intergenic |
CCATAACATTCAATATAATT+TGG | 0.154670 | 1.3:+75655976 | None:intergenic |
AACTATTCTTCTTCCAAAAT+TGG | 0.166254 | 1.3:-75658965 | MS.gene71839:CDS |
CCTTTGGTATACACCATATT+TGG | 0.191511 | 1.3:+75656914 | None:intergenic |
TCTAAGCAACATGTTGAATT+TGG | 0.194891 | 1.3:+75656639 | None:intergenic |
CATGAACTTGTTCCCATTGA+TGG | 0.200732 | 1.3:-75656756 | MS.gene71839:CDS |
TTGTTCCCATTGATGGCTTA+TGG | 0.207976 | 1.3:-75656749 | MS.gene71839:CDS |
AACCTCAATTCTGATTTATA+TGG | 0.214481 | 1.3:-75657911 | MS.gene71839:CDS |
CCAATGCCTTATTGGGCTTT+TGG | 0.214511 | 1.3:-75657674 | MS.gene71839:intron |
GACCAGCTCCAATGCCTTAT+TGG | 0.220700 | 1.3:-75657682 | MS.gene71839:CDS |
AAGGAGAAGAACAATATTTA+TGG | 0.239634 | 1.3:-75658875 | MS.gene71839:CDS |
CTCTTAATGTTCTGCTTTAG+AGG | 0.256844 | 1.3:+75658241 | None:intergenic |
ACGGTAACCTTGACCAATTT+TGG | 0.256950 | 1.3:+75658952 | None:intergenic |
CCAAATTATATTGAATGTTA+TGG | 0.285456 | 1.3:-75655976 | MS.gene71839:CDS |
ACCATCTGGGGTTTCTTCTA+TGG | 0.285985 | 1.3:+75658922 | None:intergenic |
GGCAAGTTTGCTTTGGATAA+AGG | 0.286766 | 1.3:-75655517 | MS.gene71839:CDS |
TACATGGATCTCAGAAATTA+TGG | 0.290185 | 1.3:-75657875 | MS.gene71839:CDS |
AATGCTTCTTTGTATGGTTT+AGG | 0.293509 | 1.3:-75658013 | MS.gene71839:CDS |
TCTCTAACATACAAGATTAT+TGG | 0.295149 | 1.3:-75657782 | MS.gene71839:CDS |
TCAATCCTAAAACAGTTTCT+TGG | 0.296518 | 1.3:-75656803 | MS.gene71839:CDS |
TCCAGAAAGTTTAAAAGCTT+TGG | 0.296909 | 1.3:+75656999 | None:intergenic |
CAAAGCTCTTCAGTAGATAT+AGG | 0.310188 | 1.3:+75656216 | None:intergenic |
ACCAGCTCCAATGCCTTATT+GGG | 0.312736 | 1.3:-75657681 | MS.gene71839:CDS |
AAATCCCACTTGATGTGATA+TGG | 0.313259 | 1.3:-75657085 | MS.gene71839:CDS |
TTTGGAAGTGGGTAGTTAAC+TGG | 0.327337 | 1.3:+75657017 | None:intergenic |
AGAGGTGGTGGTTGCTCCCT+TGG | 0.335983 | 1.3:+75658259 | None:intergenic |
AGTGGACAAAATCTTTCCTT+TGG | 0.343375 | 1.3:+75656678 | None:intergenic |
CCAAAGCAAACTTGCCCTCT+TGG | 0.345644 | 1.3:+75655524 | None:intergenic |
TATTGGTCTTTGAAGACTAA+TGG | 0.353482 | 1.3:+75658064 | None:intergenic |
TTCATGGCTATGGTTTGGCC+AGG | 0.357236 | 1.3:-75656849 | MS.gene71839:CDS |
ACATTTGAAACACTAATTGA+TGG | 0.362606 | 1.3:+75655415 | None:intergenic |
ACTAGTGCAGTTCATTATAA+TGG | 0.366084 | 1.3:-75656522 | MS.gene71839:CDS |
ATTGCTGTTAACACCAAATA+TGG | 0.367671 | 1.3:-75656927 | MS.gene71839:CDS |
GGATGTAACTTCATTCCATT+TGG | 0.370565 | 1.3:+75657977 | None:intergenic |
AAGAAAGAACTGTGAAAATT+TGG | 0.371315 | 1.3:-75655555 | MS.gene71839:CDS |
TACAAAGTGTAAGGATCATT+TGG | 0.371407 | 1.3:+75657956 | None:intergenic |
CCTTACAAAATCAATGCTTC+AGG | 0.372716 | 1.3:-75656579 | MS.gene71839:CDS |
CCAAGAGGGCAAGTTTGCTT+TGG | 0.372848 | 1.3:-75655524 | MS.gene71839:CDS |
TGAGTCTGACTCATTAGAAT+TGG | 0.384951 | 1.3:+75658093 | None:intergenic |
CTCAGCACTCAGTTCTTACT+TGG | 0.385859 | 1.3:-75655952 | MS.gene71839:CDS |
AGCAAGGTGGTATGGTATCT+AGG | 0.395724 | 1.3:-75655735 | MS.gene71839:CDS |
AAAGTCACAATGAGGCTAAA+AGG | 0.397650 | 1.3:+75655697 | None:intergenic |
ATTCCCACAACTGCACCATC+TGG | 0.399138 | 1.3:+75658908 | None:intergenic |
CTACTGAAGAGCTTTGTAAT+AGG | 0.400311 | 1.3:-75656209 | MS.gene71839:CDS |
GATATAGGGTATCTTAAAGT+TGG | 0.409246 | 1.3:+75656231 | None:intergenic |
GATCAGTACACATCCTTCAT+TGG | 0.410902 | 1.3:-75657707 | MS.gene71839:CDS |
TATTGTTCTTCTCCTTAACT+TGG | 0.410962 | 1.3:+75658882 | None:intergenic |
TATTTGGCATGCCAATGGTT+GGG | 0.419183 | 1.3:-75656287 | MS.gene71839:CDS |
TTGTCTCGTTCGACTTATGT+AGG | 0.420317 | 1.3:-75656402 | MS.gene71839:CDS |
AAGAAAAGAGGCCTAGCAAT+TGG | 0.421000 | 1.3:+75656006 | None:intergenic |
AAAGCTCTTCAGTAGATATA+GGG | 0.422191 | 1.3:+75656217 | None:intergenic |
ATCATACCAAAAGCCCAATA+AGG | 0.422925 | 1.3:+75657668 | None:intergenic |
CTCCCTTGGCAAAAGATTGT+AGG | 0.423465 | 1.3:+75658273 | None:intergenic |
TGGTAGAAATTTCCAAGTAT+TGG | 0.424582 | 1.3:+75658047 | None:intergenic |
GACAGTAATGGTTGGAATCA+AGG | 0.424972 | 1.3:-75655335 | MS.gene71839:CDS |
AATAAACTGTACCATGTTCC+AGG | 0.425441 | 1.3:+75655865 | None:intergenic |
TCTAATGAGTCAGACTCATT+TGG | 0.428327 | 1.3:-75658088 | MS.gene71839:CDS |
ATTTGCTCTTACTTGGAAGA+TGG | 0.428523 | 1.3:-75655287 | MS.gene71839:CDS |
AACCATTCATGGCTATGGTT+TGG | 0.429079 | 1.3:-75656854 | MS.gene71839:CDS |
TCAGGAAACGAGGTTCCAAT+AGG | 0.429359 | 1.3:-75656561 | MS.gene71839:CDS |
AACTATGAGGCTCATATTAG+TGG | 0.432250 | 1.3:-75656033 | MS.gene71839:CDS |
TACATTGTGATTAATGATCC+TGG | 0.435231 | 1.3:-75656951 | MS.gene71839:CDS |
CTAGAAATGCCTTGGGGATG+AGG | 0.442860 | 1.3:-75656086 | MS.gene71839:CDS |
GTCAATCCATAAGCCATCAA+TGG | 0.444923 | 1.3:+75656743 | None:intergenic |
CGGGCAAATATGCTGCTCAT+TGG | 0.449393 | 1.3:-75656377 | MS.gene71839:CDS |
ACCATACCACCTTGCTGCAT+TGG | 0.449875 | 1.3:+75655742 | None:intergenic |
ATGTTCTGCTTTAGAGGTGG+TGG | 0.451799 | 1.3:+75658247 | None:intergenic |
CATCATTAGCCATACCCCTT+TGG | 0.452655 | 1.3:+75656898 | None:intergenic |
TGTTCTTCTCCTTAACTTGG+AGG | 0.453325 | 1.3:+75658885 | None:intergenic |
GTTTGCTTTGGATAAAGGTT+GGG | 0.454749 | 1.3:-75655512 | MS.gene71839:CDS |
CTCTAAAGCAGAACATTAAG+AGG | 0.456684 | 1.3:-75658240 | MS.gene71839:CDS |
ATATCTACCATCCTCAACTT+TGG | 0.457035 | 1.3:-75656312 | MS.gene71839:CDS |
TTGGTGTTAACAGCAATTCC+AGG | 0.459549 | 1.3:+75656933 | None:intergenic |
AGTTTAAAAGCTTTGGAAGT+GGG | 0.460750 | 1.3:+75657006 | None:intergenic |
ATTGACACAATAAATGTGTT+GGG | 0.461642 | 1.3:-75655487 | MS.gene71839:CDS |
ATGGAATGATGATGATCATA+TGG | 0.462495 | 1.3:-75657066 | MS.gene71839:CDS |
GTATGAAGGTGAACCATTCA+TGG | 0.465514 | 1.3:-75656865 | MS.gene71839:CDS |
CATTGGTAAAGTTCTTGTCT+AGG | 0.469328 | 1.3:+75656129 | None:intergenic |
AAAAGAACACCATGTGCATA+AGG | 0.470012 | 1.3:+75657845 | None:intergenic |
ATTTGGCATGCCAATGGTTG+GGG | 0.471878 | 1.3:-75656286 | MS.gene71839:CDS |
CCAGAAATGAAGGTTGGAAA+TGG | 0.473505 | 1.3:-75655613 | MS.gene71839:CDS |
CAAATATGGTGTATACCAAA+GGG | 0.474155 | 1.3:-75656913 | MS.gene71839:CDS |
GTGCTTTCTATCCTTTCTCA+AGG | 0.475234 | 1.3:-75656173 | MS.gene71839:CDS |
TCATGGCTATGGTTTGGCCA+GGG | 0.475858 | 1.3:-75656848 | MS.gene71839:CDS |
ACCCCAGATGGTGCAGTTGT+GGG | 0.475887 | 1.3:-75658911 | MS.gene71839:CDS |
AACCCCAGATGGTGCAGTTG+TGG | 0.479632 | 1.3:-75658912 | MS.gene71839:CDS |
TGTGGGAATCCTCCAAGTTA+AGG | 0.479720 | 1.3:-75658894 | MS.gene71839:CDS |
ATTGGTAAAGTTCTTGTCTA+GGG | 0.480364 | 1.3:+75656130 | None:intergenic |
GAATCAGCTAGAAATGCCTT+GGG | 0.481077 | 1.3:-75656093 | MS.gene71839:CDS |
TTTGCTCTTACTTGGAAGAT+GGG | 0.482034 | 1.3:-75655286 | MS.gene71839:CDS |
TGAATCAGCTAGAAATGCCT+TGG | 0.483623 | 1.3:-75656094 | MS.gene71839:CDS |
CATTTAGCTTTGCAGTCAAA+AGG | 0.483916 | 1.3:-75658144 | MS.gene71839:CDS |
CATCAATGGGAACAAGTTCA+TGG | 0.486650 | 1.3:+75656757 | None:intergenic |
TTCTTTCTTTCACACTTGCA+TGG | 0.486775 | 1.3:+75655569 | None:intergenic |
CAACATCTTCAGTAACAGAT+AGG | 0.487221 | 1.3:+75657129 | None:intergenic |
ATTTCTCCTGTTCTTGAGCA+AGG | 0.488456 | 1.3:-75655916 | MS.gene71839:CDS |
AGTCTTCAAAGACCAATACT+TGG | 0.493567 | 1.3:-75658059 | MS.gene71839:CDS |
CTTAAAGTTGGATAGAAAGC+TGG | 0.495901 | 1.3:+75656243 | None:intergenic |
TCAGTTGTATACAAAGTGTA+AGG | 0.495984 | 1.3:+75657947 | None:intergenic |
CATGGCTATGGTTTGGCCAG+GGG | 0.496864 | 1.3:-75656847 | MS.gene71839:CDS |
GGAGAGAACACACAACCAAA+TGG | 0.497705 | 1.3:-75657992 | MS.gene71839:CDS |
TTTCCGGCAGGTGCAAATGA+AGG | 0.497767 | 1.3:-75655676 | MS.gene71839:CDS |
TCTCCTTCATTTGCACCTGC+CGG | 0.497790 | 1.3:+75655673 | None:intergenic |
TCAATCCATAAGCCATCAAT+GGG | 0.497973 | 1.3:+75656744 | None:intergenic |
CGTTCGACTTATGTAGGATC+GGG | 0.499553 | 1.3:-75656396 | MS.gene71839:CDS |
AGTTTGCTTTGGATAAAGGT+TGG | 0.501919 | 1.3:-75655513 | MS.gene71839:CDS |
TGCTTTCTATCCTTTCTCAA+GGG | 0.504390 | 1.3:-75656172 | MS.gene71839:CDS |
TAGGATTCCACCAATGCAGA+TGG | 0.505678 | 1.3:-75657163 | MS.gene71839:CDS |
TCCAATGCAGCAAGGTGGTA+TGG | 0.505863 | 1.3:-75655743 | MS.gene71839:CDS |
CATTGACACAATAAATGTGT+TGG | 0.510267 | 1.3:-75655488 | MS.gene71839:CDS |
AATGTGTTGGGATTGAACTA+TGG | 0.510755 | 1.3:-75655475 | MS.gene71839:CDS |
GCCCAATAAGGCATTGGAGC+TGG | 0.510842 | 1.3:+75657680 | None:intergenic |
AGGTGAACCATTCATGGCTA+TGG | 0.513044 | 1.3:-75656859 | MS.gene71839:CDS |
TCCCTTGGCAAAAGATTGTA+GGG | 0.513411 | 1.3:+75658274 | None:intergenic |
CATATATCTGCCCCAACCAT+TGG | 0.514027 | 1.3:+75656276 | None:intergenic |
AAATATGCTGCTCATTGGAC+AGG | 0.517759 | 1.3:-75656372 | MS.gene71839:CDS |
TCCTAAAACAGTTTCTTGGT+GGG | 0.519260 | 1.3:-75656799 | MS.gene71839:CDS |
ATCCTAAAACAGTTTCTTGG+TGG | 0.519347 | 1.3:-75656800 | MS.gene71839:CDS |
TTCCCACAACTGCACCATCT+GGG | 0.519729 | 1.3:+75658909 | None:intergenic |
CTGAAGAGCTTTGTAATAGG+TGG | 0.519987 | 1.3:-75656206 | MS.gene71839:CDS |
TAGACAAGAACTTTACCAAT+GGG | 0.521788 | 1.3:-75656127 | MS.gene71839:CDS |
CTTGAATGATCCCTTGAGAA+AGG | 0.521811 | 1.3:+75656162 | None:intergenic |
CACAGCTAAACATAGAAGAA+AGG | 0.525430 | 1.3:+75658994 | None:intergenic |
TTGACAGAGAAGCGTAAAAG+AGG | 0.526144 | 1.3:+75658842 | None:intergenic |
ATATTTGGCATGCCAATGGT+TGG | 0.526177 | 1.3:-75656288 | MS.gene71839:CDS |
TGGAGCTGGTCTTCCAATGA+AGG | 0.526197 | 1.3:+75657694 | None:intergenic |
TGTAATAGGTGGATTGAAGT+TGG | 0.527400 | 1.3:-75656195 | MS.gene71839:CDS |
TTTCTTCTATGGATATCAAA+CGG | 0.528164 | 1.3:+75658933 | None:intergenic |
TTTGTTGAACAGCAATGGAA+TGG | 0.528824 | 1.3:-75657825 | MS.gene71839:CDS |
TCTTCTTCCAAAATTGGTCA+AGG | 0.530222 | 1.3:-75658959 | MS.gene71839:CDS |
GAAAAGAAGACAGTAATGGT+TGG | 0.534346 | 1.3:-75655343 | MS.gene71839:CDS |
ACAGTAATGGTTGGAATCAA+GGG | 0.534860 | 1.3:-75655334 | MS.gene71839:CDS |
CAAACATCACAAGCACAAGA+TGG | 0.536329 | 1.3:-75656611 | MS.gene71839:CDS |
TTTCTGAGATCCATGTATAG+AGG | 0.537339 | 1.3:+75657881 | None:intergenic |
CAAATGAAGGAGAAGCTAAA+GGG | 0.537513 | 1.3:-75655663 | MS.gene71839:CDS |
CCAAAAGCCCAATAAGGCAT+TGG | 0.538141 | 1.3:+75657674 | None:intergenic |
GCAAGGTGGTATGGTATCTA+GGG | 0.538161 | 1.3:-75655734 | MS.gene71839:CDS |
TGGTGTATACCAAAGGGGTA+TGG | 0.538274 | 1.3:-75656907 | MS.gene71839:CDS |
GGCCAAACCATAGCCATGAA+TGG | 0.539131 | 1.3:+75656852 | None:intergenic |
TTTGGAAATGAGAAGAAAAG+AGG | 0.540219 | 1.3:+75655994 | None:intergenic |
CCAAATATGGTGTATACCAA+AGG | 0.540340 | 1.3:-75656914 | MS.gene71839:CDS |
CGAGACTGAGAGTCGTTTGA+GGG | 0.541513 | 1.3:-75658335 | MS.gene71839:CDS |
CAGGAAACGAGGTTCCAATA+GGG | 0.541627 | 1.3:-75656560 | MS.gene71839:CDS |
CTGGAAAGAATACACAGCAT+TGG | 0.545714 | 1.3:-75656981 | MS.gene71839:CDS |
TGGATCACATCCTCTATACA+TGG | 0.546181 | 1.3:-75657891 | MS.gene71839:CDS |
TTTCTCCTGTTCTTGAGCAA+GGG | 0.549514 | 1.3:-75655915 | MS.gene71839:CDS |
AGGATTCCACCAATGCAGAT+GGG | 0.551106 | 1.3:-75657162 | MS.gene71839:CDS |
AAGTTTAAAAGCTTTGGAAG+TGG | 0.551326 | 1.3:+75657005 | None:intergenic |
CTAACATACAAGATTATTGG+AGG | 0.551675 | 1.3:-75657779 | MS.gene71839:CDS |
GATAACCCCATCTGCATTGG+TGG | 0.551913 | 1.3:+75657156 | None:intergenic |
CTTTCTTCTATGTTTAGCTG+TGG | 0.553870 | 1.3:-75658993 | MS.gene71839:CDS |
ATCCATATAAATCAGAATTG+AGG | 0.555438 | 1.3:+75657909 | None:intergenic |
TCAGGAAAGTAAACAGCCCC+TGG | 0.555795 | 1.3:+75656831 | None:intergenic |
GTGCACATTGACCACATGCA+AGG | 0.559657 | 1.3:+75655786 | None:intergenic |
TGGAATATTTGGCATGCCAA+TGG | 0.559770 | 1.3:-75656292 | MS.gene71839:CDS |
TCGTTCGACTTATGTAGGAT+CGG | 0.560139 | 1.3:-75656397 | MS.gene71839:CDS |
GCAAATGAAGGAGAAGCTAA+AGG | 0.560340 | 1.3:-75655664 | MS.gene71839:CDS |
TTAATGTTCTGCTTTAGAGG+TGG | 0.560564 | 1.3:+75658244 | None:intergenic |
ATGGTTGGGGCAGATATATG+TGG | 0.560579 | 1.3:-75656273 | MS.gene71839:CDS |
CTGGCATCTCATCATCATCA+AGG | 0.562676 | 1.3:+75655632 | None:intergenic |
TGGGAACAAGTTCATGGAAG+CGG | 0.564130 | 1.3:+75656763 | None:intergenic |
TGATGAGATGCCAGAAATGA+AGG | 0.564392 | 1.3:-75655623 | MS.gene71839:CDS |
ACGAGACTGAGAGTCGTTTG+AGG | 0.564484 | 1.3:-75658336 | MS.gene71839:CDS |
CATAAGTACTTGTTCAAGCA+AGG | 0.565145 | 1.3:-75655373 | MS.gene71839:CDS |
CCTAAAACAGTTTCTTGGTG+GGG | 0.565502 | 1.3:-75656798 | MS.gene71839:CDS |
CAGGTGACAACAAAGGAACA+TGG | 0.568723 | 1.3:-75656353 | MS.gene71839:CDS |
CCACATGCAAGGGTGCATCA+AGG | 0.571980 | 1.3:+75655797 | None:intergenic |
GAGATGCCAGAAATGAAGGT+TGG | 0.572011 | 1.3:-75655619 | MS.gene71839:CDS |
ACTTGCATGGAAATCAATGT+AGG | 0.572582 | 1.3:+75655582 | None:intergenic |
TTAGTGGAGCTCCAATTGCT+AGG | 0.573586 | 1.3:-75656017 | MS.gene71839:CDS |
ATTATAATGAACTGCACTAG+TGG | 0.575537 | 1.3:+75656524 | None:intergenic |
AACTGTGAAAATTTGGTCAG+AGG | 0.576949 | 1.3:-75655548 | MS.gene71839:CDS |
AAACATCACAAGCACAAGAT+GGG | 0.577901 | 1.3:-75656610 | MS.gene71839:CDS |
TCATTCCATATCACATCAAG+TGG | 0.578430 | 1.3:+75657080 | None:intergenic |
TTGCTCTTACTTGGAAGATG+GGG | 0.578968 | 1.3:-75655285 | MS.gene71839:CDS |
AAGTGCCTTGTGTGTTGCAA+TGG | 0.579411 | 1.3:+75656455 | None:intergenic |
TGCACATTGACCACATGCAA+GGG | 0.581908 | 1.3:+75655787 | None:intergenic |
ATTCAGCTACTGATTCCCAT+TGG | 0.582684 | 1.3:+75656112 | None:intergenic |
CTGATGCAAAGAAGCAAAGG+TGG | 0.583740 | 1.3:-75658303 | MS.gene71839:CDS |
CACATGCAAGGGTGCATCAA+GGG | 0.585072 | 1.3:+75655798 | None:intergenic |
TCCCACAACTGCACCATCTG+GGG | 0.590038 | 1.3:+75658910 | None:intergenic |
TGCCAAATATTCCAAAGTTG+AGG | 0.590042 | 1.3:+75656301 | None:intergenic |
GAAGAACAATATTTATGGTG+TGG | 0.596902 | 1.3:-75658870 | MS.gene71839:CDS |
TGTGATAACCCCATCTGCAT+TGG | 0.599649 | 1.3:+75657153 | None:intergenic |
TGAAGAAAAGAAGACAGTAA+TGG | 0.599948 | 1.3:-75655347 | MS.gene71839:CDS |
TACTGATCAACAACATTCAG+AGG | 0.600637 | 1.3:+75657722 | None:intergenic |
CTAGACAAGAACTTTACCAA+TGG | 0.604650 | 1.3:-75656128 | MS.gene71839:CDS |
TTGGTAAAGTTCTTGTCTAG+GGG | 0.608014 | 1.3:+75656131 | None:intergenic |
AAGGGCTTGAATATCCCTGT+AGG | 0.609551 | 1.3:-75655316 | MS.gene71839:CDS |
AATGATGATGATCATATGGA+TGG | 0.612209 | 1.3:-75657062 | MS.gene71839:CDS |
TCAACAACATTCAGAGGCGT+AGG | 0.614205 | 1.3:+75657728 | None:intergenic |
AAATATTCCAAAGTTGAGGA+TGG | 0.614380 | 1.3:+75656305 | None:intergenic |
TGGAAAGTGTACTATTCCAA+AGG | 0.615293 | 1.3:-75656694 | MS.gene71839:CDS |
TCACTGATGCAAAGAAGCAA+AGG | 0.617505 | 1.3:-75658306 | MS.gene71839:CDS |
AGTTCATTATAATGGTGTGT+TGG | 0.620484 | 1.3:-75656514 | MS.gene71839:CDS |
GAGAGAGTGAAAGCAAGTAA+TGG | 0.630320 | 1.3:+75659019 | None:intergenic |
TGAAGCCATTGCAACACACA+AGG | 0.632983 | 1.3:-75656460 | MS.gene71839:CDS |
TGATCATATGGATGGACACA+AGG | 0.633322 | 1.3:-75657054 | MS.gene71839:CDS |
GGATTCCACCAATGCAGATG+GGG | 0.633813 | 1.3:-75657161 | MS.gene71839:CDS |
GTCGAACGAGACAAAACGAA+TGG | 0.636935 | 1.3:+75656411 | None:intergenic |
CCTTGATGCACCCTTGCATG+TGG | 0.639630 | 1.3:-75655797 | MS.gene71839:CDS |
GCAGTCAAAAGGAAGTCCAA+TGG | 0.647522 | 1.3:-75658133 | MS.gene71839:CDS |
CAAGTAAGAACTGAGTGCTG+AGG | 0.648886 | 1.3:+75655953 | None:intergenic |
CATTGGACAGGTGACAACAA+AGG | 0.655325 | 1.3:-75656360 | MS.gene71839:CDS |
TGATGCAAAGAAGCAAAGGT+GGG | 0.656549 | 1.3:-75658302 | MS.gene71839:CDS |
TTGGGATTGAACTATGGAAG+CGG | 0.657050 | 1.3:-75655469 | MS.gene71839:CDS |
ACTATTCTTCCAATGCAGCA+AGG | 0.657465 | 1.3:-75655751 | MS.gene71839:CDS |
ATGGATCTCAGAAATTATGG+TGG | 0.657514 | 1.3:-75657872 | MS.gene71839:CDS |
ATTTGGTCAGAGGTCCAAGA+GGG | 0.663354 | 1.3:-75655538 | MS.gene71839:CDS |
AGGTGACAACAAAGGAACAT+GGG | 0.666332 | 1.3:-75656352 | MS.gene71839:CDS |
TCCATAGAAGAAACCCCAGA+TGG | 0.666734 | 1.3:-75658923 | MS.gene71839:CDS |
TGCAAAGAAGCAAAGGTGGG+AGG | 0.668986 | 1.3:-75658299 | MS.gene71839:CDS |
GAGCTTATACCTCATCCCCA+AGG | 0.672581 | 1.3:+75656077 | None:intergenic |
AATCAATGCTTCAGGAAACG+AGG | 0.680650 | 1.3:-75656571 | MS.gene71839:CDS |
CATTCCATATCACATCAAGT+GGG | 0.686488 | 1.3:+75657081 | None:intergenic |
AATTTGGTCAGAGGTCCAAG+AGG | 0.694466 | 1.3:-75655539 | MS.gene71839:CDS |
CTGCCGGAAAAGTCACAATG+AGG | 0.708507 | 1.3:+75655689 | None:intergenic |
AAATATGGTGTATACCAAAG+GGG | 0.716838 | 1.3:-75656912 | MS.gene71839:CDS |
TGACAACAAAGGAACATGGG+AGG | 0.717254 | 1.3:-75656349 | MS.gene71839:CDS |
AAACTGTACCATGTTCCAGG+AGG | 0.726996 | 1.3:+75655868 | None:intergenic |
ATTCTTCCAATGCAGCAAGG+TGG | 0.730263 | 1.3:-75655748 | MS.gene71839:CDS |
AATCAGCTAGAAATGCCTTG+GGG | 0.737082 | 1.3:-75656092 | MS.gene71839:CDS |
GGTGGAAAACCTTATGCACA+TGG | 0.742085 | 1.3:-75657854 | MS.gene71839:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTTTTTCAATTTTTTTTTT+TGG | + | chr1.3:75656740-75656759 | None:intergenic | 10.0% |
!! | AATTAAATAAGTGAGTATAT+TGG | + | chr1.3:75657112-75657131 | None:intergenic | 15.0% |
!! | TAACTATATCAATTTATGTT+TGG | - | chr1.3:75655591-75655610 | MS.gene71839:CDS | 15.0% |
!! | TAACTTAATAGAATTAGTAT+AGG | + | chr1.3:75657049-75657068 | None:intergenic | 15.0% |
!!! | AATATTAAACTTTTACTACA+GGG | - | chr1.3:75656830-75656849 | MS.gene71839:CDS | 15.0% |
!!! | ATACTCACTTATTTAATTTT+TGG | - | chr1.3:75657114-75657133 | MS.gene71839:CDS | 15.0% |
!!! | TAATATTAAACTTTTACTAC+AGG | - | chr1.3:75656829-75656848 | MS.gene71839:CDS | 15.0% |
!! | AATCCAAACATTACAATTTA+TGG | - | chr1.3:75655745-75655764 | MS.gene71839:CDS | 20.0% |
!! | ATAGTTTAGTGTGTAAAAAT+AGG | + | chr1.3:75658266-75658285 | None:intergenic | 20.0% |
!! | CCAAATTATATTGAATGTTA+TGG | - | chr1.3:75658337-75658356 | MS.gene71839:CDS | 20.0% |
!! | CCATAACATTCAATATAATT+TGG | + | chr1.3:75658340-75658359 | None:intergenic | 20.0% |
!! | TAGTAAAAATTGAGATTGAT+GGG | - | chr1.3:75658872-75658891 | MS.gene71839:CDS | 20.0% |
!! | TAGTTTAGTGTGTAAAAATA+GGG | + | chr1.3:75658265-75658284 | None:intergenic | 20.0% |
!!! | AAATAGAAATGTTAGCTTTT+AGG | - | chr1.3:75655689-75655708 | MS.gene71839:CDS | 20.0% |
!!! | CACTTATTTAATTTTTGGTT+TGG | - | chr1.3:75657119-75657138 | MS.gene71839:CDS | 20.0% |
!!! | TTTTAGGTAGAATTGATTTT+AGG | - | chr1.3:75655705-75655724 | MS.gene71839:CDS | 20.0% |
! | AAAATATACACTACAGTGAT+GGG | + | chr1.3:75656693-75656712 | None:intergenic | 25.0% |
! | AACCTCAATTCTGATTTATA+TGG | - | chr1.3:75656402-75656421 | MS.gene71839:CDS | 25.0% |
! | AACTATTCTTCTTCCAAAAT+TGG | - | chr1.3:75655348-75655367 | MS.gene71839:CDS | 25.0% |
! | AAGAAAGAACTGTGAAAATT+TGG | - | chr1.3:75658758-75658777 | MS.gene71839:intron | 25.0% |
! | AAGGAGAAGAACAATATTTA+TGG | - | chr1.3:75655438-75655457 | MS.gene71839:CDS | 25.0% |
! | AATAGATCAAGTAGAATATG+TGG | + | chr1.3:75655867-75655886 | None:intergenic | 25.0% |
! | AGTAAAAATTGAGATTGATG+GGG | - | chr1.3:75658873-75658892 | MS.gene71839:CDS | 25.0% |
! | AGTTTAGTGTGTAAAAATAG+GGG | + | chr1.3:75658264-75658283 | None:intergenic | 25.0% |
! | ATAGATCAAGTAGAATATGT+GGG | + | chr1.3:75655866-75655885 | None:intergenic | 25.0% |
! | ATCCATATAAATCAGAATTG+AGG | + | chr1.3:75656407-75656426 | None:intergenic | 25.0% |
! | ATTGACACAATAAATGTGTT+GGG | - | chr1.3:75658826-75658845 | MS.gene71839:intron | 25.0% |
! | CTAGTAAAAATTGAGATTGA+TGG | - | chr1.3:75658871-75658890 | MS.gene71839:CDS | 25.0% |
! | TCTCTAACATACAAGATTAT+TGG | - | chr1.3:75656531-75656550 | MS.gene71839:CDS | 25.0% |
! | TTTCTTCTATGGATATCAAA+CGG | + | chr1.3:75655383-75655402 | None:intergenic | 25.0% |
!! | ACATTTGAAACACTAATTGA+TGG | + | chr1.3:75658901-75658920 | None:intergenic | 25.0% |
!! | GAAGTTTCAAATTTTTGCAA+TGG | - | chr1.3:75657599-75657618 | MS.gene71839:intron | 25.0% |
!! | TTAACACTTTTACATGTTCT+CGG | - | chr1.3:75655944-75655963 | MS.gene71839:CDS | 25.0% |
!! | TTTTTACACACTAAACTATG+AGG | - | chr1.3:75658267-75658286 | MS.gene71839:CDS | 25.0% |
!!! | AATTTTGGAAGAAGAATAGT+TGG | + | chr1.3:75655349-75655368 | None:intergenic | 25.0% |
!!! | GATGTTTTTATCAAGTATGA+AGG | - | chr1.3:75657434-75657453 | MS.gene71839:intron | 25.0% |
!!! | TTTTGGTTTGGTGTATTTAT+AGG | - | chr1.3:75657131-75657150 | MS.gene71839:CDS | 25.0% |
AAAGCTCTTCAGTAGATATA+GGG | + | chr1.3:75658099-75658118 | None:intergenic | 30.0% | |
AAATATGGTGTATACCAAAG+GGG | - | chr1.3:75657401-75657420 | MS.gene71839:intron | 30.0% | |
AAATATTCCAAAGTTGAGGA+TGG | + | chr1.3:75658011-75658030 | None:intergenic | 30.0% | |
AACAGTCTAATCTATAGTCT+TGG | + | chr1.3:75657024-75657043 | None:intergenic | 30.0% | |
AAGAAGATGTTAGAAGTTTC+TGG | - | chr1.3:75656906-75656925 | MS.gene71839:CDS | 30.0% | |
AATGCTTCTTTGTATGGTTT+AGG | - | chr1.3:75656300-75656319 | MS.gene71839:CDS | 30.0% | |
ACTAGTGCAGTTCATTATAA+TGG | - | chr1.3:75657791-75657810 | MS.gene71839:CDS | 30.0% | |
AGAAGATGTTAGAAGTTTCT+GGG | - | chr1.3:75656907-75656926 | MS.gene71839:CDS | 30.0% | |
AGTTCATTATAATGGTGTGT+TGG | - | chr1.3:75657799-75657818 | MS.gene71839:CDS | 30.0% | |
ATTATAATGAACTGCACTAG+TGG | + | chr1.3:75657792-75657811 | None:intergenic | 30.0% | |
ATTGGTAAAGTTCTTGTCTA+GGG | + | chr1.3:75658186-75658205 | None:intergenic | 30.0% | |
CAAATATGGTGTATACCAAA+GGG | - | chr1.3:75657400-75657419 | MS.gene71839:intron | 30.0% | |
CATTGACACAATAAATGTGT+TGG | - | chr1.3:75658825-75658844 | MS.gene71839:intron | 30.0% | |
CTAACATACAAGATTATTGG+AGG | - | chr1.3:75656534-75656553 | MS.gene71839:CDS | 30.0% | |
GAAAATATACACTACAGTGA+TGG | + | chr1.3:75656694-75656713 | None:intergenic | 30.0% | |
GAAGAACAATATTTATGGTG+TGG | - | chr1.3:75655443-75655462 | MS.gene71839:CDS | 30.0% | |
GACAAACCAAAATGTGATTA+CGG | - | chr1.3:75655781-75655800 | MS.gene71839:CDS | 30.0% | |
GGACCATAAATTGTAATGTT+TGG | + | chr1.3:75655751-75655770 | None:intergenic | 30.0% | |
TACAAAGTGTAAGGATCATT+TGG | + | chr1.3:75656360-75656379 | None:intergenic | 30.0% | |
TACATGGATCTCAGAAATTA+TGG | - | chr1.3:75656438-75656457 | MS.gene71839:CDS | 30.0% | |
TACATTGTGATTAATGATCC+TGG | - | chr1.3:75657362-75657381 | MS.gene71839:intron | 30.0% | |
TAGACAAGAACTTTACCAAT+GGG | - | chr1.3:75658186-75658205 | MS.gene71839:CDS | 30.0% | |
TATTGTTCTTCTCCTTAACT+TGG | + | chr1.3:75655434-75655453 | None:intergenic | 30.0% | |
TCAATCCTAAAACAGTTTCT+TGG | - | chr1.3:75657510-75657529 | MS.gene71839:intron | 30.0% | |
TCAGTTGTATACAAAGTGTA+AGG | + | chr1.3:75656369-75656388 | None:intergenic | 30.0% | |
TCCAGAAAGTTTAAAAGCTT+TGG | + | chr1.3:75657317-75657336 | None:intergenic | 30.0% | |
TCTAAGCAACATGTTGAATT+TGG | + | chr1.3:75657677-75657696 | None:intergenic | 30.0% | |
TGAAGAAAAGAAGACAGTAA+TGG | - | chr1.3:75658966-75658985 | MS.gene71839:CDS | 30.0% | |
TGGTAGAAATTTCCAAGTAT+TGG | + | chr1.3:75656269-75656288 | None:intergenic | 30.0% | |
TTTGGAAATGAGAAGAAAAG+AGG | + | chr1.3:75658322-75658341 | None:intergenic | 30.0% | |
! | AATGATGATGATCATATGGA+TGG | - | chr1.3:75657251-75657270 | MS.gene71839:intron | 30.0% |
! | ATGGAATGATGATGATCATA+TGG | - | chr1.3:75657247-75657266 | MS.gene71839:intron | 30.0% |
! | ATTGCTGTTAACACCAAATA+TGG | - | chr1.3:75657386-75657405 | MS.gene71839:intron | 30.0% |
! | CTTGATTTTTACTTCTTTGC+AGG | - | chr1.3:75656561-75656580 | MS.gene71839:CDS | 30.0% |
! | GAAAAAGATTTGCTCTTACT+TGG | - | chr1.3:75659019-75659038 | MS.gene71839:CDS | 30.0% |
! | GAATGGATGTGTTTTACAAA+GGG | - | chr1.3:75656505-75656524 | MS.gene71839:CDS | 30.0% |
! | GATATAGGGTATCTTAAAGT+TGG | + | chr1.3:75658085-75658104 | None:intergenic | 30.0% |
! | GCTAACATTTCTATTTTCTC+TGG | + | chr1.3:75655685-75655704 | None:intergenic | 30.0% |
! | TACTTTCCGTAATCACATTT+TGG | + | chr1.3:75655790-75655809 | None:intergenic | 30.0% |
! | TATGATGCTCATAGTCTTTT+TGG | - | chr1.3:75657824-75657843 | MS.gene71839:CDS | 30.0% |
! | TCCAAAGCTTTTAAACTTTC+TGG | - | chr1.3:75657313-75657332 | MS.gene71839:intron | 30.0% |
!! | AAGTTTAAAAGCTTTGGAAG+TGG | + | chr1.3:75657311-75657330 | None:intergenic | 30.0% |
!! | AGTTTAAAAGCTTTGGAAGT+GGG | + | chr1.3:75657310-75657329 | None:intergenic | 30.0% |
!! | ATCCTCAACTTTGGAATATT+TGG | - | chr1.3:75658010-75658029 | MS.gene71839:CDS | 30.0% |
!! | TATTGGTCTTTGAAGACTAA+TGG | + | chr1.3:75656252-75656271 | None:intergenic | 30.0% |
!!! | ACCATACAAAGAAGCATTTT+TGG | + | chr1.3:75656298-75656317 | None:intergenic | 30.0% |
!!! | CACATTTTGGTTTGTCAAAT+GGG | + | chr1.3:75655777-75655796 | None:intergenic | 30.0% |
!!! | CCATACAAAGAAGCATTTTT+GGG | + | chr1.3:75656297-75656316 | None:intergenic | 30.0% |
!!! | GTTTTAGGATTGAGAAAATC+AGG | + | chr1.3:75657503-75657522 | None:intergenic | 30.0% |
!!! | TCACATTTTGGTTTGTCAAA+TGG | + | chr1.3:75655778-75655797 | None:intergenic | 30.0% |
AAAAGAACACCATGTGCATA+AGG | + | chr1.3:75656471-75656490 | None:intergenic | 35.0% | |
AAACATCACAAGCACAAGAT+GGG | - | chr1.3:75657703-75657722 | MS.gene71839:CDS | 35.0% | |
AAAGTCACAATGAGGCTAAA+AGG | + | chr1.3:75658619-75658638 | None:intergenic | 35.0% | |
AAATCCCACTTGATGTGATA+TGG | - | chr1.3:75657228-75657247 | MS.gene71839:intron | 35.0% | |
AACTATGAGGCTCATATTAG+TGG | - | chr1.3:75658280-75658299 | MS.gene71839:CDS | 35.0% | |
AACTGTGAAAATTTGGTCAG+AGG | - | chr1.3:75658765-75658784 | MS.gene71839:intron | 35.0% | |
AATAAACTGTACCATGTTCC+AGG | + | chr1.3:75658451-75658470 | None:intergenic | 35.0% | |
AATGTGTTGGGATTGAACTA+TGG | - | chr1.3:75658838-75658857 | MS.gene71839:intron | 35.0% | |
ACAGTAATGGTTGGAATCAA+GGG | - | chr1.3:75658979-75658998 | MS.gene71839:CDS | 35.0% | |
ACTTGCATGGAAATCAATGT+AGG | + | chr1.3:75658734-75658753 | None:intergenic | 35.0% | |
AGTCTTCAAAGACCAATACT+TGG | - | chr1.3:75656254-75656273 | MS.gene71839:CDS | 35.0% | |
AGTGGACAAAATCTTTCCTT+TGG | + | chr1.3:75657638-75657657 | None:intergenic | 35.0% | |
ATATCTACCATCCTCAACTT+TGG | - | chr1.3:75658001-75658020 | MS.gene71839:CDS | 35.0% | |
ATCATACCAAAAGCCCAATA+AGG | + | chr1.3:75656648-75656667 | None:intergenic | 35.0% | |
ATCCTAAAACAGTTTCTTGG+TGG | - | chr1.3:75657513-75657532 | MS.gene71839:intron | 35.0% | |
ATGGATCTCAGAAATTATGG+TGG | - | chr1.3:75656441-75656460 | MS.gene71839:CDS | 35.0% | |
ATTTGCTCTTACTTGGAAGA+TGG | - | chr1.3:75659026-75659045 | MS.gene71839:CDS | 35.0% | |
CAAAGCTCTTCAGTAGATAT+AGG | + | chr1.3:75658100-75658119 | None:intergenic | 35.0% | |
CAAATGAAGGAGAAGCTAAA+GGG | - | chr1.3:75658650-75658669 | MS.gene71839:intron | 35.0% | |
CAACATCTTCAGTAACAGAT+AGG | + | chr1.3:75657187-75657206 | None:intergenic | 35.0% | |
CACAGCTAAACATAGAAGAA+AGG | + | chr1.3:75655322-75655341 | None:intergenic | 35.0% | |
CATAAGTACTTGTTCAAGCA+AGG | - | chr1.3:75658940-75658959 | MS.gene71839:CDS | 35.0% | |
CATTCCATATCACATCAAGT+GGG | + | chr1.3:75657235-75657254 | None:intergenic | 35.0% | |
CATTGGTAAAGTTCTTGTCT+AGG | + | chr1.3:75658187-75658206 | None:intergenic | 35.0% | |
CCAAATATGGTGTATACCAA+AGG | - | chr1.3:75657399-75657418 | MS.gene71839:intron | 35.0% | |
CCCAAAAATGCTTCTTTGTA+TGG | - | chr1.3:75656294-75656313 | MS.gene71839:CDS | 35.0% | |
CCTTACAAAATCAATGCTTC+AGG | - | chr1.3:75657734-75657753 | MS.gene71839:CDS | 35.0% | |
CCTTTGGTATACACCATATT+TGG | + | chr1.3:75657402-75657421 | None:intergenic | 35.0% | |
CGTGCGATTTAGACTATATT+TGG | + | chr1.3:75655824-75655843 | None:intergenic | 35.0% | |
CTAGACAAGAACTTTACCAA+TGG | - | chr1.3:75658185-75658204 | MS.gene71839:CDS | 35.0% | |
CTCTTAATGTTCTGCTTTAG+AGG | + | chr1.3:75656075-75656094 | None:intergenic | 35.0% | |
CTTAAAGTTGGATAGAAAGC+TGG | + | chr1.3:75658073-75658092 | None:intergenic | 35.0% | |
CTTTCTTCTATGTTTAGCTG+TGG | - | chr1.3:75655320-75655339 | MS.gene71839:CDS | 35.0% | |
GAAAAGAAGACAGTAATGGT+TGG | - | chr1.3:75658970-75658989 | MS.gene71839:CDS | 35.0% | |
GGATGTAACTTCATTCCATT+TGG | + | chr1.3:75656339-75656358 | None:intergenic | 35.0% | |
TACTGATCAACAACATTCAG+AGG | + | chr1.3:75656594-75656613 | None:intergenic | 35.0% | |
TATATTGGTCATGATGCAAC+AGG | + | chr1.3:75657097-75657116 | None:intergenic | 35.0% | |
TCAATCCATAAGCCATCAAT+GGG | + | chr1.3:75657572-75657591 | None:intergenic | 35.0% | |
TCATTCCATATCACATCAAG+TGG | + | chr1.3:75657236-75657255 | None:intergenic | 35.0% | |
TCCTAAAACAGTTTCTTGGT+GGG | - | chr1.3:75657514-75657533 | MS.gene71839:intron | 35.0% | |
TCTAATGAGTCAGACTCATT+TGG | - | chr1.3:75656225-75656244 | MS.gene71839:CDS | 35.0% | |
TCTTCTTCCAAAATTGGTCA+AGG | - | chr1.3:75655354-75655373 | MS.gene71839:CDS | 35.0% | |
TGACACATGAAATGCACTTT+AGG | - | chr1.3:75656771-75656790 | MS.gene71839:CDS | 35.0% | |
TGAGTCTGACTCATTAGAAT+TGG | + | chr1.3:75656223-75656242 | None:intergenic | 35.0% | |
TGCCAAATATTCCAAAGTTG+AGG | + | chr1.3:75658015-75658034 | None:intergenic | 35.0% | |
TGCTTTCTATCCTTTCTCAA+GGG | - | chr1.3:75658141-75658160 | MS.gene71839:CDS | 35.0% | |
TTAGTGTGTAAAAATAGGGG+AGG | + | chr1.3:75658261-75658280 | None:intergenic | 35.0% | |
TTCTTTCTTTCACACTTGCA+TGG | + | chr1.3:75658747-75658766 | None:intergenic | 35.0% | |
TTGGTAAAGTTCTTGTCTAG+GGG | + | chr1.3:75658185-75658204 | None:intergenic | 35.0% | |
TTTGCTCTTACTTGGAAGAT+GGG | - | chr1.3:75659027-75659046 | MS.gene71839:CDS | 35.0% | |
TTTGTTGAACAGCAATGGAA+TGG | - | chr1.3:75656488-75656507 | MS.gene71839:CDS | 35.0% | |
! | AGAGCAAATCTTTTTCCTAC+AGG | + | chr1.3:75659015-75659034 | None:intergenic | 35.0% |
! | AGTTTGCTTTGGATAAAGGT+TGG | - | chr1.3:75658800-75658819 | MS.gene71839:intron | 35.0% |
! | CTACTGAAGAGCTTTGTAAT+AGG | - | chr1.3:75658104-75658123 | MS.gene71839:CDS | 35.0% |
! | GAAAGATTTTGTCCACTTCA+GGG | - | chr1.3:75657641-75657660 | MS.gene71839:intron | 35.0% |
! | GAGCAAATCTTTTTCCTACA+GGG | + | chr1.3:75659014-75659033 | None:intergenic | 35.0% |
! | GGAATGGATGTGTTTTACAA+AGG | - | chr1.3:75656504-75656523 | MS.gene71839:CDS | 35.0% |
! | GTTCTTTTGTTGAACAGCAA+TGG | - | chr1.3:75656483-75656502 | MS.gene71839:CDS | 35.0% |
! | GTTTGCTTTGGATAAAGGTT+GGG | - | chr1.3:75658801-75658820 | MS.gene71839:intron | 35.0% |
! | TAATCTATAGTCTTGGCATC+TGG | + | chr1.3:75657017-75657036 | None:intergenic | 35.0% |
! | TGGAAAGTGTACTATTCCAA+AGG | - | chr1.3:75657619-75657638 | MS.gene71839:intron | 35.0% |
!! | AAGGCACTTTTTGAACTTCA+AGG | - | chr1.3:75657872-75657891 | MS.gene71839:CDS | 35.0% |
!! | CATTTAGCTTTGCAGTCAAA+AGG | - | chr1.3:75656169-75656188 | MS.gene71839:CDS | 35.0% |
!! | CTCTAAAGCAGAACATTAAG+AGG | - | chr1.3:75656073-75656092 | MS.gene71839:CDS | 35.0% |
!! | CTTTTGACTGCAAAGCTAAA+TGG | + | chr1.3:75656171-75656190 | None:intergenic | 35.0% |
!! | GTCAAAAAGAGTATCACCAT+TGG | + | chr1.3:75656199-75656218 | None:intergenic | 35.0% |
!! | TGTAATAGGTGGATTGAAGT+TGG | - | chr1.3:75658118-75658137 | MS.gene71839:CDS | 35.0% |
!! | TTAATGTTCTGCTTTAGAGG+TGG | + | chr1.3:75656072-75656091 | None:intergenic | 35.0% |
!! | TTTCTGAGATCCATGTATAG+AGG | + | chr1.3:75656435-75656454 | None:intergenic | 35.0% |
!! | TTTGGTTTGTCAAATGGGAT+TGG | + | chr1.3:75655772-75655791 | None:intergenic | 35.0% |
!!! | AGAAGCATTTTTGGGCAATT+TGG | + | chr1.3:75656289-75656308 | None:intergenic | 35.0% |
!!! | CCTGAAGCATTGATTTTGTA+AGG | + | chr1.3:75657737-75657756 | None:intergenic | 35.0% |
!!! | GAAGCATTGATTTTGTAAGG+AGG | + | chr1.3:75657734-75657753 | None:intergenic | 35.0% |
!!! | GCTATAGTTTTGTACCCTAT+TGG | + | chr1.3:75657770-75657789 | None:intergenic | 35.0% |
AAATATGCTGCTCATTGGAC+AGG | - | chr1.3:75657941-75657960 | MS.gene71839:CDS | 40.0% | |
AACCATTCATGGCTATGGTT+TGG | - | chr1.3:75657459-75657478 | MS.gene71839:intron | 40.0% | |
AAGAAAAGAGGCCTAGCAAT+TGG | + | chr1.3:75658310-75658329 | None:intergenic | 40.0% | |
AATCAATGCTTCAGGAAACG+AGG | - | chr1.3:75657742-75657761 | MS.gene71839:CDS | 40.0% | |
AATCAGCTAGAAATGCCTTG+GGG | - | chr1.3:75658221-75658240 | MS.gene71839:CDS | 40.0% | |
ACTATTCTTCCAATGCAGCA+AGG | - | chr1.3:75658562-75658581 | MS.gene71839:intron | 40.0% | |
AGGTGACAACAAAGGAACAT+GGG | - | chr1.3:75657961-75657980 | MS.gene71839:CDS | 40.0% | |
ATATTTGGCATGCCAATGGT+TGG | - | chr1.3:75658025-75658044 | MS.gene71839:CDS | 40.0% | |
ATTTCTCCTGTTCTTGAGCA+AGG | - | chr1.3:75658397-75658416 | MS.gene71839:intron | 40.0% | |
CAAACATCACAAGCACAAGA+TGG | - | chr1.3:75657702-75657721 | MS.gene71839:CDS | 40.0% | |
CATCAATGGGAACAAGTTCA+TGG | + | chr1.3:75657559-75657578 | None:intergenic | 40.0% | |
CCAGAAATGAAGGTTGGAAA+TGG | - | chr1.3:75658700-75658719 | MS.gene71839:intron | 40.0% | |
CCATTTCCAACCTTCATTTC+TGG | + | chr1.3:75658703-75658722 | None:intergenic | 40.0% | |
CCTAAAACAGTTTCTTGGTG+GGG | - | chr1.3:75657515-75657534 | MS.gene71839:intron | 40.0% | |
CTGGAAAGAATACACAGCAT+TGG | - | chr1.3:75657332-75657351 | MS.gene71839:intron | 40.0% | |
CTTGAATGATCCCTTGAGAA+AGG | + | chr1.3:75658154-75658173 | None:intergenic | 40.0% | |
GAATCAGCTAGAAATGCCTT+GGG | - | chr1.3:75658220-75658239 | MS.gene71839:CDS | 40.0% | |
GACAGTAATGGTTGGAATCA+AGG | - | chr1.3:75658978-75658997 | MS.gene71839:CDS | 40.0% | |
GAGAGAGTGAAAGCAAGTAA+TGG | + | chr1.3:75655297-75655316 | None:intergenic | 40.0% | |
GATCAGTACACATCCTTCAT+TGG | - | chr1.3:75656606-75656625 | MS.gene71839:CDS | 40.0% | |
GCAAATGAAGGAGAAGCTAA+AGG | - | chr1.3:75658649-75658668 | MS.gene71839:intron | 40.0% | |
GTATGAAGGTGAACCATTCA+TGG | - | chr1.3:75657448-75657467 | MS.gene71839:intron | 40.0% | |
GTCAATCCATAAGCCATCAA+TGG | + | chr1.3:75657573-75657592 | None:intergenic | 40.0% | |
GTCTTGGCATCTGGAAATTA+TGG | + | chr1.3:75657008-75657027 | None:intergenic | 40.0% | |
GTGCTTTCTATCCTTTCTCA+AGG | - | chr1.3:75658140-75658159 | MS.gene71839:CDS | 40.0% | |
TATTTGGCATGCCAATGGTT+GGG | - | chr1.3:75658026-75658045 | MS.gene71839:CDS | 40.0% | |
TCACTGATGCAAAGAAGCAA+AGG | - | chr1.3:75656007-75656026 | MS.gene71839:CDS | 40.0% | |
TCCCTTGGCAAAAGATTGTA+GGG | + | chr1.3:75656042-75656061 | None:intergenic | 40.0% | |
TCGTTCGACTTATGTAGGAT+CGG | - | chr1.3:75657916-75657935 | MS.gene71839:CDS | 40.0% | |
TGAATCAGCTAGAAATGCCT+TGG | - | chr1.3:75658219-75658238 | MS.gene71839:CDS | 40.0% | |
TGATCATATGGATGGACACA+AGG | - | chr1.3:75657259-75657278 | MS.gene71839:intron | 40.0% | |
TGATGAGATGCCAGAAATGA+AGG | - | chr1.3:75658690-75658709 | MS.gene71839:intron | 40.0% | |
TGATGCAAAGAAGCAAAGGT+GGG | - | chr1.3:75656011-75656030 | MS.gene71839:CDS | 40.0% | |
TGGAATATTTGGCATGCCAA+TGG | - | chr1.3:75658021-75658040 | MS.gene71839:CDS | 40.0% | |
TGGATCACATCCTCTATACA+TGG | - | chr1.3:75656422-75656441 | MS.gene71839:CDS | 40.0% | |
TTGCTCTTACTTGGAAGATG+GGG | - | chr1.3:75659028-75659047 | MS.gene71839:CDS | 40.0% | |
TTGGGATTGAACTATGGAAG+CGG | - | chr1.3:75658844-75658863 | MS.gene71839:CDS | 40.0% | |
TTGTCTCGTTCGACTTATGT+AGG | - | chr1.3:75657911-75657930 | MS.gene71839:CDS | 40.0% | |
TTTCTCCTGTTCTTGAGCAA+GGG | - | chr1.3:75658398-75658417 | MS.gene71839:intron | 40.0% | |
TTTGGAAGTGGGTAGTTAAC+TGG | + | chr1.3:75657299-75657318 | None:intergenic | 40.0% | |
! | ACGGTAACCTTGACCAATTT+TGG | + | chr1.3:75655364-75655383 | None:intergenic | 40.0% |
! | CATGAACTTGTTCCCATTGA+TGG | - | chr1.3:75657557-75657576 | MS.gene71839:intron | 40.0% |
! | CTGAAGAGCTTTGTAATAGG+TGG | - | chr1.3:75658107-75658126 | MS.gene71839:CDS | 40.0% |
! | GATGTTAGAAGTTTCTGGGA+AGG | - | chr1.3:75656911-75656930 | MS.gene71839:CDS | 40.0% |
! | GGAAAGATTTTGTCCACTTC+AGG | - | chr1.3:75657640-75657659 | MS.gene71839:intron | 40.0% |
! | GGCAAGTTTGCTTTGGATAA+AGG | - | chr1.3:75658796-75658815 | MS.gene71839:intron | 40.0% |
! | GGTAATTTTTCTCCCTGAAG+TGG | + | chr1.3:75657656-75657675 | None:intergenic | 40.0% |
! | TAGCCTCATTGTGACTTTTC+CGG | - | chr1.3:75658621-75658640 | MS.gene71839:intron | 40.0% |
! | TCCCTACAATCTTTTGCCAA+GGG | - | chr1.3:75656038-75656057 | MS.gene71839:CDS | 40.0% |
! | TGTTCTTCTCCTTAACTTGG+AGG | + | chr1.3:75655431-75655450 | None:intergenic | 40.0% |
! | TTCCCTACAATCTTTTGCCA+AGG | - | chr1.3:75656037-75656056 | MS.gene71839:CDS | 40.0% |
! | TTGACAGAGAAGCGTAAAAG+AGG | + | chr1.3:75655474-75655493 | None:intergenic | 40.0% |
! | TTGTTCCCATTGATGGCTTA+TGG | - | chr1.3:75657564-75657583 | MS.gene71839:intron | 40.0% |
!! | ATTCAGCTACTGATTCCCAT+TGG | + | chr1.3:75658204-75658223 | None:intergenic | 40.0% |
!! | TTGGTGTTAACAGCAATTCC+AGG | + | chr1.3:75657383-75657402 | None:intergenic | 40.0% |
AAACTGTACCATGTTCCAGG+AGG | + | chr1.3:75658448-75658467 | None:intergenic | 45.0% | |
AAGGGCTTGAATATCCCTGT+AGG | - | chr1.3:75658997-75659016 | MS.gene71839:CDS | 45.0% | |
AAGTGCCTTGTGTGTTGCAA+TGG | + | chr1.3:75657861-75657880 | None:intergenic | 45.0% | |
AATTTGGTCAGAGGTCCAAG+AGG | - | chr1.3:75658774-75658793 | MS.gene71839:intron | 45.0% | |
AGCAAGGTGGTATGGTATCT+AGG | - | chr1.3:75658578-75658597 | MS.gene71839:intron | 45.0% | |
AGGATTCCACCAATGCAGAT+GGG | - | chr1.3:75657151-75657170 | MS.gene71839:CDS | 45.0% | |
AGGTGAACCATTCATGGCTA+TGG | - | chr1.3:75657454-75657473 | MS.gene71839:intron | 45.0% | |
ATGGTTGGGGCAGATATATG+TGG | - | chr1.3:75658040-75658059 | MS.gene71839:CDS | 45.0% | |
ATTCTTCCAATGCAGCAAGG+TGG | - | chr1.3:75658565-75658584 | MS.gene71839:intron | 45.0% | |
ATTTGGCATGCCAATGGTTG+GGG | - | chr1.3:75658027-75658046 | MS.gene71839:CDS | 45.0% | |
ATTTGGTCAGAGGTCCAAGA+GGG | - | chr1.3:75658775-75658794 | MS.gene71839:intron | 45.0% | |
CAGGAAACGAGGTTCCAATA+GGG | - | chr1.3:75657753-75657772 | MS.gene71839:CDS | 45.0% | |
CAGGTGACAACAAAGGAACA+TGG | - | chr1.3:75657960-75657979 | MS.gene71839:CDS | 45.0% | |
CATATATCTGCCCCAACCAT+TGG | + | chr1.3:75658040-75658059 | None:intergenic | 45.0% | |
CATCATTAGCCATACCCCTT+TGG | + | chr1.3:75657418-75657437 | None:intergenic | 45.0% | |
CATTGGACAGGTGACAACAA+AGG | - | chr1.3:75657953-75657972 | MS.gene71839:CDS | 45.0% | |
CCAAAAGCCCAATAAGGCAT+TGG | + | chr1.3:75656642-75656661 | None:intergenic | 45.0% | |
CGTTCGACTTATGTAGGATC+GGG | - | chr1.3:75657917-75657936 | MS.gene71839:CDS | 45.0% | |
CTCAGCACTCAGTTCTTACT+TGG | - | chr1.3:75658361-75658380 | MS.gene71839:intron | 45.0% | |
CTCCCTTGGCAAAAGATTGT+AGG | + | chr1.3:75656043-75656062 | None:intergenic | 45.0% | |
CTGATGCAAAGAAGCAAAGG+TGG | - | chr1.3:75656010-75656029 | MS.gene71839:CDS | 45.0% | |
CTGGCATCTCATCATCATCA+AGG | + | chr1.3:75658684-75658703 | None:intergenic | 45.0% | |
GAGATGCCAGAAATGAAGGT+TGG | - | chr1.3:75658694-75658713 | MS.gene71839:intron | 45.0% | |
GCAAGGTGGTATGGTATCTA+GGG | - | chr1.3:75658579-75658598 | MS.gene71839:intron | 45.0% | |
GCAGTCAAAAGGAAGTCCAA+TGG | - | chr1.3:75656180-75656199 | MS.gene71839:CDS | 45.0% | |
GGAGAGAACACACAACCAAA+TGG | - | chr1.3:75656321-75656340 | MS.gene71839:CDS | 45.0% | |
GGTGGAAAACCTTATGCACA+TGG | - | chr1.3:75656459-75656478 | MS.gene71839:CDS | 45.0% | |
GTCGAACGAGACAAAACGAA+TGG | + | chr1.3:75657905-75657924 | None:intergenic | 45.0% | |
TAGGATTCCACCAATGCAGA+TGG | - | chr1.3:75657150-75657169 | MS.gene71839:CDS | 45.0% | |
TCAGGAAACGAGGTTCCAAT+AGG | - | chr1.3:75657752-75657771 | MS.gene71839:CDS | 45.0% | |
TCCATAGAAGAAACCCCAGA+TGG | - | chr1.3:75655390-75655409 | MS.gene71839:CDS | 45.0% | |
TGAAGCCATTGCAACACACA+AGG | - | chr1.3:75657853-75657872 | MS.gene71839:CDS | 45.0% | |
TGACAACAAAGGAACATGGG+AGG | - | chr1.3:75657964-75657983 | MS.gene71839:CDS | 45.0% | |
TGCACATTGACCACATGCAA+GGG | + | chr1.3:75658529-75658548 | None:intergenic | 45.0% | |
TGGGAACAAGTTCATGGAAG+CGG | + | chr1.3:75657553-75657572 | None:intergenic | 45.0% | |
TGGTGTATACCAAAGGGGTA+TGG | - | chr1.3:75657406-75657425 | MS.gene71839:intron | 45.0% | |
TGTGATAACCCCATCTGCAT+TGG | + | chr1.3:75657163-75657182 | None:intergenic | 45.0% | |
TGTGGGAATCCTCCAAGTTA+AGG | - | chr1.3:75655419-75655438 | MS.gene71839:CDS | 45.0% | |
TTACATGTTCTCGGTCTTGC+AGG | - | chr1.3:75655953-75655972 | MS.gene71839:CDS | 45.0% | |
TTAGTGGAGCTCCAATTGCT+AGG | - | chr1.3:75658296-75658315 | MS.gene71839:CDS | 45.0% | |
! | AAGTTTCTGGGAAGGAATGC+AGG | - | chr1.3:75656919-75656938 | MS.gene71839:CDS | 45.0% |
! | ACACTACAGTGATGGGACTA+TGG | + | chr1.3:75656686-75656705 | None:intergenic | 45.0% |
! | ACCAGCTCCAATGCCTTATT+GGG | - | chr1.3:75656632-75656651 | MS.gene71839:CDS | 45.0% |
! | ACCATCTGGGGTTTCTTCTA+TGG | + | chr1.3:75655394-75655413 | None:intergenic | 45.0% |
! | CAAGTAAGAACTGAGTGCTG+AGG | + | chr1.3:75658363-75658382 | None:intergenic | 45.0% |
! | CCCCACCAAGAAACTGTTTT+AGG | + | chr1.3:75657518-75657537 | None:intergenic | 45.0% |
! | GTTTTCCCTTGCTCAAGAAC+AGG | + | chr1.3:75658406-75658425 | None:intergenic | 45.0% |
! | TCAACAACATTCAGAGGCGT+AGG | + | chr1.3:75656588-75656607 | None:intergenic | 45.0% |
!! | ATGTTCTGCTTTAGAGGTGG+TGG | + | chr1.3:75656069-75656088 | None:intergenic | 45.0% |
!! | CCAATGCCTTATTGGGCTTT+TGG | - | chr1.3:75656639-75656658 | MS.gene71839:CDS | 45.0% |
!!! | CACTTTTTCCTCCTGGAACA+TGG | - | chr1.3:75658437-75658456 | MS.gene71839:intron | 45.0% |
!!! | GTTAGAGCACTTTTTCCTCC+TGG | - | chr1.3:75658430-75658449 | MS.gene71839:intron | 45.0% |
ACCATACCACCTTGCTGCAT+TGG | + | chr1.3:75658574-75658593 | None:intergenic | 50.0% | |
ACGAGACTGAGAGTCGTTTG+AGG | - | chr1.3:75655977-75655996 | MS.gene71839:CDS | 50.0% | |
ATTCCCACAACTGCACCATC+TGG | + | chr1.3:75655408-75655427 | None:intergenic | 50.0% | |
CCAAAGCAAACTTGCCCTCT+TGG | + | chr1.3:75658792-75658811 | None:intergenic | 50.0% | |
CGAGACTGAGAGTCGTTTGA+GGG | - | chr1.3:75655978-75655997 | MS.gene71839:CDS | 50.0% | |
CGGGCAAATATGCTGCTCAT+TGG | - | chr1.3:75657936-75657955 | MS.gene71839:CDS | 50.0% | |
CTAGAAATGCCTTGGGGATG+AGG | - | chr1.3:75658227-75658246 | MS.gene71839:CDS | 50.0% | |
CTGCCGGAAAAGTCACAATG+AGG | + | chr1.3:75658627-75658646 | None:intergenic | 50.0% | |
GACCAGCTCCAATGCCTTAT+TGG | - | chr1.3:75656631-75656650 | MS.gene71839:CDS | 50.0% | |
GAGCTTATACCTCATCCCCA+AGG | + | chr1.3:75658239-75658258 | None:intergenic | 50.0% | |
GATAACCCCATCTGCATTGG+TGG | + | chr1.3:75657160-75657179 | None:intergenic | 50.0% | |
GGATTCCACCAATGCAGATG+GGG | - | chr1.3:75657152-75657171 | MS.gene71839:CDS | 50.0% | |
GGCCAAACCATAGCCATGAA+TGG | + | chr1.3:75657464-75657483 | None:intergenic | 50.0% | |
GTGCACATTGACCACATGCA+AGG | + | chr1.3:75658530-75658549 | None:intergenic | 50.0% | |
TCAGGAAAGTAAACAGCCCC+TGG | + | chr1.3:75657485-75657504 | None:intergenic | 50.0% | |
TCCAATGCAGCAAGGTGGTA+TGG | - | chr1.3:75658570-75658589 | MS.gene71839:intron | 50.0% | |
TCTCCTTCATTTGCACCTGC+CGG | + | chr1.3:75658643-75658662 | None:intergenic | 50.0% | |
TGCAAAGAAGCAAAGGTGGG+AGG | - | chr1.3:75656014-75656033 | MS.gene71839:CDS | 50.0% | |
TTCCCACAACTGCACCATCT+GGG | + | chr1.3:75655407-75655426 | None:intergenic | 50.0% | |
TTTCCGGCAGGTGCAAATGA+AGG | - | chr1.3:75658637-75658656 | MS.gene71839:intron | 50.0% | |
! | CACATGCAAGGGTGCATCAA+GGG | + | chr1.3:75658518-75658537 | None:intergenic | 50.0% |
! | CCAAGAGGGCAAGTTTGCTT+TGG | - | chr1.3:75658789-75658808 | MS.gene71839:intron | 50.0% |
! | CTCATTGTGACTTTTCCGGC+AGG | - | chr1.3:75658625-75658644 | MS.gene71839:intron | 50.0% |
! | TCATGGCTATGGTTTGGCCA+GGG | - | chr1.3:75657465-75657484 | MS.gene71839:intron | 50.0% |
! | TTCATGGCTATGGTTTGGCC+AGG | - | chr1.3:75657464-75657483 | MS.gene71839:intron | 50.0% |
!! | TGGAGCTGGTCTTCCAATGA+AGG | + | chr1.3:75656622-75656641 | None:intergenic | 50.0% |
AACCCCAGATGGTGCAGTTG+TGG | - | chr1.3:75655401-75655420 | MS.gene71839:CDS | 55.0% | |
ACCCCAGATGGTGCAGTTGT+GGG | - | chr1.3:75655402-75655421 | MS.gene71839:CDS | 55.0% | |
CCTTGATGCACCCTTGCATG+TGG | - | chr1.3:75658516-75658535 | MS.gene71839:intron | 55.0% | |
TCCCACAACTGCACCATCTG+GGG | + | chr1.3:75655406-75655425 | None:intergenic | 55.0% | |
! | CATGGCTATGGTTTGGCCAG+GGG | - | chr1.3:75657466-75657485 | MS.gene71839:intron | 55.0% |
! | CCACATGCAAGGGTGCATCA+AGG | + | chr1.3:75658519-75658538 | None:intergenic | 55.0% |
!! | GCCCAATAAGGCATTGGAGC+TGG | + | chr1.3:75656636-75656655 | None:intergenic | 55.0% |
! | AGAGGTGGTGGTTGCTCCCT+TGG | + | chr1.3:75656057-75656076 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 75655279 | 75659056 | 75655279 | ID=MS.gene71839 |
chr1.3 | mRNA | 75655279 | 75659056 | 75655279 | ID=MS.gene71839.t1;Parent=MS.gene71839 |
chr1.3 | exon | 75658842 | 75659056 | 75658842 | ID=MS.gene71839.t1.exon1;Parent=MS.gene71839.t1 |
chr1.3 | CDS | 75658842 | 75659056 | 75658842 | ID=cds.MS.gene71839.t1;Parent=MS.gene71839.t1 |
chr1.3 | exon | 75657675 | 75658360 | 75657675 | ID=MS.gene71839.t1.exon2;Parent=MS.gene71839.t1 |
chr1.3 | CDS | 75657675 | 75658360 | 75657675 | ID=cds.MS.gene71839.t1;Parent=MS.gene71839.t1 |
chr1.3 | exon | 75655279 | 75657182 | 75655279 | ID=MS.gene71839.t1.exon3;Parent=MS.gene71839.t1 |
chr1.3 | CDS | 75655279 | 75657182 | 75655279 | ID=cds.MS.gene71839.t1;Parent=MS.gene71839.t1 |
Gene Sequence |
Protein sequence |