AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71875

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71875.t1 MTR_2g078700 97.128 383 9 1 1 383 1 381 0.0 775
MS.gene71875.t1 MTR_4g108760 52.922 308 92 9 23 326 17 275 1.73e-90 276
MS.gene71875.t1 MTR_3g435150 55.390 269 87 5 23 287 16 255 1.67e-89 272
MS.gene71875.t1 MTR_6g012670 49.492 295 105 6 22 316 19 269 2.23e-86 265
MS.gene71875.t1 MTR_7g085260 60.766 209 63 3 23 229 17 208 1.32e-81 254
MS.gene71875.t1 MTR_6g032770 46.575 292 128 7 23 314 18 281 1.53e-81 254
MS.gene71875.t1 MTR_3g109340 59.155 213 74 3 23 230 22 226 5.67e-81 252
MS.gene71875.t1 MTR_1g008740 68.862 167 48 2 11 176 1 164 8.54e-81 251
MS.gene71875.t1 MTR_6g084430 74.522 157 34 3 20 176 2 152 9.11e-81 250
MS.gene71875.t1 MTR_1g008740 68.862 167 48 2 11 176 15 178 1.37e-80 251
MS.gene71875.t1 MTR_3g109340 57.895 209 84 2 23 230 22 227 2.48e-80 250
MS.gene71875.t1 MTR_3g070030 55.172 232 84 4 9 239 5 217 5.24e-80 249
MS.gene71875.t1 MTR_7g011130 52.846 246 83 5 8 239 4 230 5.82e-76 239
MS.gene71875.t1 MTR_7g011120 66.471 170 48 2 18 180 3 170 7.90e-73 229
MS.gene71875.t1 MTR_3g116070 73.103 145 35 2 23 166 23 164 2.67e-71 227
MS.gene71875.t1 MTR_2g064470 47.148 263 94 9 20 282 8 225 8.00e-66 211
MS.gene71875.t1 MTR_3g070040 50.893 224 86 6 18 239 3 204 2.05e-63 206
MS.gene71875.t1 MTR_1g069805 55.556 162 66 1 21 182 8 163 1.20e-61 199
MS.gene71875.t1 MTR_4g035590 58.642 162 57 3 19 177 4 158 3.09e-59 196
MS.gene71875.t1 MTR_7g097090 56.494 154 61 1 21 174 8 155 1.30e-58 192
MS.gene71875.t1 MTR_4g101680 57.485 167 56 5 18 178 2 159 1.39e-58 194
MS.gene71875.t1 MTR_4g036030 54.878 164 65 3 18 178 2 159 2.32e-58 193
MS.gene71875.t1 MTR_2g064090 59.615 156 58 3 23 176 6 158 2.55e-57 191
MS.gene71875.t1 MTR_4g089135 51.667 180 66 3 22 180 14 193 2.55e-57 191
MS.gene71875.t1 MTR_2g062730 55.346 159 63 3 23 178 10 163 3.25e-57 190
MS.gene71875.t1 MTR_5g021710 47.500 200 85 6 17 208 2 189 6.63e-57 190
MS.gene71875.t1 MTR_7g100990 42.857 266 128 6 14 268 2 254 8.19e-57 189
MS.gene71875.t1 MTR_5g012080 54.658 161 66 3 18 175 2 158 2.11e-56 188
MS.gene71875.t1 MTR_5g041940 53.797 158 69 2 22 177 2 157 2.67e-56 185
MS.gene71875.t1 MTR_8g024480 51.765 170 70 4 18 177 10 177 3.16e-56 190
MS.gene71875.t1 MTR_2g080010 54.217 166 67 2 22 178 14 179 3.16e-56 188
MS.gene71875.t1 MTR_2157s0010 54.938 162 65 3 23 176 8 169 4.26e-56 185
MS.gene71875.t1 MTR_7g085220 52.632 171 72 2 22 183 7 177 4.97e-56 187
MS.gene71875.t1 MTR_6g477900 56.774 155 61 3 23 175 6 156 5.82e-55 181
MS.gene71875.t1 MTR_4g081870 52.795 161 72 2 21 179 7 165 1.32e-54 181
MS.gene71875.t1 MTR_8g059170 55.000 160 70 1 19 178 10 167 1.96e-54 182
MS.gene71875.t1 MTR_3g088110 54.938 162 67 3 19 178 3 160 4.21e-54 181
MS.gene71875.t1 MTR_2g093810 55.346 159 69 1 19 175 10 168 5.80e-54 181
MS.gene71875.t1 MTR_7g005280 51.462 171 74 3 18 186 10 173 7.11e-54 179
MS.gene71875.t1 MTR_5g076850 46.364 220 105 4 23 240 6 214 1.55e-53 187
MS.gene71875.t1 MTR_8g076110 50.000 164 73 3 23 183 6 163 4.95e-53 178
MS.gene71875.t1 MTR_8g467490 37.729 273 118 4 25 278 16 255 9.02e-53 180
MS.gene71875.t1 MTR_2g079990 54.321 162 62 3 23 180 16 169 1.01e-52 179
MS.gene71875.t1 MTR_3g064580 57.692 156 61 4 23 176 6 158 2.39e-52 185
MS.gene71875.t1 MTR_5g014300 34.582 347 165 11 21 342 4 313 1.12e-51 176
MS.gene71875.t1 MTR_6g011860 51.515 165 68 3 23 178 15 176 3.26e-51 176
MS.gene71875.t1 MTR_8g094580 54.140 157 63 3 23 175 7 158 3.43e-51 173
MS.gene71875.t1 MTR_2g079990 48.370 184 67 3 23 180 16 197 3.62e-51 176
MS.gene71875.t1 MTR_1g096430 50.314 159 64 4 23 175 7 156 1.79e-50 172
MS.gene71875.t1 MTR_3g096920 52.532 158 71 2 20 176 4 158 2.45e-50 171
MS.gene71875.t1 MTR_6g059440 87.234 141 13 2 164 304 38 173 4.58e-50 167
MS.gene71875.t1 MTR_5g040420 47.368 171 84 2 14 178 5 175 5.30e-50 173
MS.gene71875.t1 MTR_3g096140 53.165 158 66 4 25 179 9 161 1.37e-48 166
MS.gene71875.t1 MTR_3g096920 58.779 131 51 1 20 150 4 131 5.45e-48 166
MS.gene71875.t1 MTR_4g098630 41.667 240 114 9 21 239 4 238 6.17e-48 165
MS.gene71875.t1 MTR_3g096140 53.165 158 66 4 25 179 9 161 6.59e-48 166
MS.gene71875.t1 MTR_4g134460 51.316 152 69 2 25 176 56 202 6.24e-47 166
MS.gene71875.t1 MTR_5g069030 47.150 193 79 5 23 201 25 208 3.70e-46 167
MS.gene71875.t1 MTR_5g090970 39.352 216 120 4 11 218 6 218 5.79e-46 160
MS.gene71875.t1 MTR_1g097300 51.266 158 69 4 25 179 21 173 7.90e-46 166
MS.gene71875.t1 MTR_0036s0150 51.875 160 65 5 25 179 7 159 1.79e-45 164
MS.gene71875.t1 MTR_3g093050 46.154 195 82 5 23 203 22 207 5.82e-45 163
MS.gene71875.t1 MTR_3g093050 46.154 195 82 5 23 203 22 207 7.13e-45 164
MS.gene71875.t1 MTR_8g063550 48.750 160 74 4 23 179 6 160 2.04e-44 157
MS.gene71875.t1 MTR_1g090723 49.375 160 69 5 25 179 10 162 3.09e-44 161
MS.gene71875.t1 MTR_1g090720 50.920 163 72 3 23 179 42 202 3.29e-44 159
MS.gene71875.t1 MTR_1g090723 49.375 160 69 5 25 179 10 162 3.54e-44 162
MS.gene71875.t1 MTR_1g090723 50.000 160 69 5 25 179 10 163 3.76e-44 162
MS.gene71875.t1 MTR_5g090970 39.352 216 119 5 11 218 6 217 3.82e-44 155
MS.gene71875.t1 MTR_8g063550 48.428 159 76 3 23 179 6 160 5.12e-44 158
MS.gene71875.t1 MTR_8g063550 48.750 160 74 4 23 179 6 160 8.23e-44 157
MS.gene71875.t1 MTR_3g093040 47.486 179 71 5 23 187 108 277 1.39e-43 154
MS.gene71875.t1 MTR_8g093580 47.799 159 77 3 23 179 6 160 7.55e-43 156
MS.gene71875.t1 MTR_2g086880 49.677 155 64 4 25 178 20 161 1.98e-41 152
MS.gene71875.t1 MTR_2g086880 49.677 155 64 4 25 178 20 161 4.64e-41 152
MS.gene71875.t1 MTR_2g068880 40.845 213 112 7 11 210 9 220 9.25e-41 146
MS.gene71875.t1 MTR_2g068920 52.206 136 61 3 19 150 16 151 7.87e-40 143
MS.gene71875.t1 MTR_4g075980 51.969 127 60 1 25 150 17 143 2.61e-39 142
MS.gene71875.t1 MTR_4g097490 82.474 97 10 2 208 304 1 90 2.62e-39 137
MS.gene71875.t1 MTR_8g099750 41.818 165 91 2 18 179 9 171 6.44e-39 139
MS.gene71875.t1 MTR_3g096140 50.694 144 63 4 39 179 2 140 2.10e-38 140
MS.gene71875.t1 MTR_8g023840 52.482 141 61 4 11 148 1 138 2.40e-37 139
MS.gene71875.t1 MTR_5g039560 87.368 95 8 1 208 302 1 91 1.67e-36 132
MS.gene71875.t1 MTR_3g098810 43.023 172 88 5 18 181 9 178 1.39e-35 130
MS.gene71875.t1 MTR_8g023860 50.000 130 61 3 22 148 11 139 2.46e-34 131
MS.gene71875.t1 MTR_3g098810 45.324 139 72 2 14 150 5 141 1.46e-33 123
MS.gene71875.t1 MTR_4g052620 46.970 132 64 3 23 149 5 135 2.02e-33 125
MS.gene71875.t1 MTR_2g086690 44.697 132 66 3 24 149 5 135 1.34e-31 120
MS.gene71875.t1 MTR_1g102520 85.567 97 10 1 208 304 1 93 1.18e-30 113
MS.gene71875.t1 MTR_8g023900 35.749 207 104 5 23 226 12 192 6.60e-30 120
MS.gene71875.t1 MTR_8g023900 36.517 178 102 4 26 200 196 365 9.91e-28 114
MS.gene71875.t1 MTR_8g094580 54.630 108 40 3 72 175 2 104 6.71e-30 115
MS.gene71875.t1 MTR_8g023930 32.895 228 142 5 23 247 24 243 6.37e-29 117
MS.gene71875.t1 MTR_7g105170 39.024 164 90 6 23 177 4 166 1.52e-28 112
MS.gene71875.t1 MTR_8g023880 44.056 143 60 5 23 148 7 146 3.84e-28 111
MS.gene71875.t1 MTR_4g094302 35.329 167 93 3 23 182 11 169 4.87e-28 109
MS.gene71875.t1 MTR_4g094302 40.625 128 68 1 23 150 11 130 2.42e-27 106
MS.gene71875.t1 MTR_7g070140 56.000 75 33 0 76 150 17 91 1.34e-24 98.2
MS.gene71875.t1 MTR_8g093790 37.267 161 69 6 19 175 6 138 1.49e-20 88.6
MS.gene71875.t1 MTR_3g096400 35.583 163 85 7 23 174 7 160 9.94e-19 84.3
MS.gene71875.t1 MTR_7g083360 33.835 133 82 5 18 148 5 133 1.35e-18 82.4
MS.gene71875.t1 MTR_7g083370 33.333 135 80 5 18 148 5 133 1.48e-16 76.3
MS.gene71875.t1 MTR_7g083330 34.375 128 78 5 23 148 18 141 3.27e-16 76.6
MS.gene71875.t1 MTR_4g088245 30.688 189 101 8 23 191 68 246 3.18e-13 70.5
MS.gene71875.t1 MTR_7g070150 48.333 60 26 1 116 175 3 57 1.73e-12 63.5
MS.gene71875.t1 MTR_2g014680 29.902 204 113 10 23 207 53 245 3.29e-12 67.0
MS.gene71875.t1 MTR_4g078875 32.877 146 76 6 23 150 48 189 4.08e-12 66.6
MS.gene71875.t1 MTR_8g069160 30.000 160 93 5 7 150 52 208 6.75e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71875.t1 AT5G53950 52.683 410 132 16 1 383 1 375 1.95e-120 353
MS.gene71875.t1 AT3G15170 74.138 174 45 0 20 193 17 190 7.80e-92 278
MS.gene71875.t1 AT5G61430 68.421 209 44 4 23 231 16 202 1.58e-90 276
MS.gene71875.t1 AT5G07680 48.765 324 112 7 1 324 1 270 1.65e-89 273
MS.gene71875.t1 AT5G07680 50.993 302 100 6 23 324 3 256 2.63e-89 272
MS.gene71875.t1 AT5G18270 57.391 230 84 4 23 251 21 237 5.91e-84 259
MS.gene71875.t1 AT5G18270 56.957 230 85 4 23 251 21 237 8.08e-84 259
MS.gene71875.t1 AT3G29035 55.556 261 71 6 23 274 24 248 2.78e-83 257
MS.gene71875.t1 AT5G39610 76.433 157 35 1 23 179 20 174 4.37e-82 253
MS.gene71875.t1 AT3G18400 73.885 157 36 2 20 176 2 153 5.18e-81 251
MS.gene71875.t1 AT2G24430 67.232 177 46 3 1 176 1 166 1.40e-80 250
MS.gene71875.t1 AT2G24430 67.232 177 46 3 1 176 1 166 1.40e-80 250
MS.gene71875.t1 AT3G04060 58.605 215 72 4 13 227 10 207 2.30e-79 247
MS.gene71875.t1 AT1G76420 51.931 233 103 2 23 255 22 245 6.49e-77 241
MS.gene71875.t1 AT3G12977 53.297 182 80 3 12 192 7 184 1.76e-66 212
MS.gene71875.t1 AT1G56010 45.000 260 105 9 11 267 7 231 2.12e-62 203
MS.gene71875.t1 AT4G10350 52.308 195 82 4 19 210 5 191 2.16e-60 199
MS.gene71875.t1 AT5G61430 64.375 160 35 4 72 231 2 139 5.66e-59 192
MS.gene71875.t1 AT1G12260 56.522 161 61 3 18 175 2 156 3.64e-58 193
MS.gene71875.t1 AT1G12260 56.522 161 61 3 18 175 2 156 3.68e-58 194
MS.gene71875.t1 AT1G33280 55.556 162 62 3 19 177 4 158 5.79e-58 191
MS.gene71875.t1 AT2G46770 46.635 208 94 5 18 210 11 216 2.27e-57 191
MS.gene71875.t1 AT4G28530 44.444 225 91 4 23 231 10 216 4.08e-57 190
MS.gene71875.t1 AT1G62700 56.098 164 57 4 18 175 2 156 1.94e-56 190
MS.gene71875.t1 AT1G62700 56.098 164 57 4 18 175 2 156 1.94e-56 190
MS.gene71875.t1 AT2G18060 50.292 171 76 3 23 190 9 173 4.45e-56 188
MS.gene71875.t1 AT2G18060 50.292 171 76 3 23 190 9 173 4.45e-56 188
MS.gene71875.t1 AT3G04070 51.136 176 78 2 23 190 10 185 7.75e-56 187
MS.gene71875.t1 AT3G04070 49.479 192 73 3 23 190 10 201 1.65e-55 186
MS.gene71875.t1 AT5G62380 54.268 164 60 4 21 178 5 159 3.67e-55 185
MS.gene71875.t1 AT5G62380 54.268 164 60 4 21 178 5 159 3.67e-55 185
MS.gene71875.t1 AT1G65910 51.832 191 81 5 23 211 6 187 5.24e-55 191
MS.gene71875.t1 AT5G08790 55.422 166 64 3 18 178 2 162 9.56e-55 182
MS.gene71875.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.03e-54 184
MS.gene71875.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.03e-54 184
MS.gene71875.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.03e-54 184
MS.gene71875.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.03e-54 184
MS.gene71875.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.03e-54 184
MS.gene71875.t1 AT3G61910 47.753 178 77 4 14 177 2 177 1.35e-54 183
MS.gene71875.t1 AT1G61110 50.562 178 77 4 11 178 4 180 1.95e-54 182
MS.gene71875.t1 AT5G66300 52.096 167 70 4 16 178 5 165 2.63e-54 181
MS.gene71875.t1 AT1G01720 47.739 199 95 3 22 218 6 197 4.03e-54 181
MS.gene71875.t1 AT5G63790 48.469 196 89 4 19 209 46 234 1.10e-53 180
MS.gene71875.t1 AT1G71930 51.923 156 66 3 23 175 9 158 1.25e-53 181
MS.gene71875.t1 AT1G71930 51.923 156 66 3 23 175 9 158 1.25e-53 181
MS.gene71875.t1 AT3G17730 54.839 155 64 3 23 175 6 156 1.31e-53 178
MS.gene71875.t1 AT4G36160 50.000 172 76 4 23 190 10 175 1.54e-53 182
MS.gene71875.t1 AT4G36160 50.000 172 76 4 23 190 10 175 1.54e-53 182
MS.gene71875.t1 AT5G63790 48.469 196 89 4 19 209 56 244 1.54e-53 180
MS.gene71875.t1 AT4G27410 53.659 164 71 3 23 186 14 172 1.79e-53 179
MS.gene71875.t1 AT4G36160 50.000 172 76 4 23 190 14 179 2.03e-53 181
MS.gene71875.t1 AT1G69490 54.375 160 67 3 19 175 5 161 2.20e-53 178
MS.gene71875.t1 AT5G39820 39.194 273 133 7 11 253 5 274 6.14e-53 179
MS.gene71875.t1 AT3G03200 57.419 155 61 3 23 175 6 157 1.03e-52 182
MS.gene71875.t1 AT1G77450 45.455 209 92 5 19 209 6 210 1.20e-52 176
MS.gene71875.t1 AT5G04410 54.717 159 66 3 23 179 9 163 1.35e-52 184
MS.gene71875.t1 AT1G54330 59.355 155 54 3 23 175 6 153 1.61e-52 177
MS.gene71875.t1 AT1G32770 50.581 172 70 4 18 177 11 179 2.25e-52 178
MS.gene71875.t1 AT3G10500 53.374 163 62 4 23 179 9 163 2.28e-52 183
MS.gene71875.t1 AT5G46590 55.484 155 65 3 23 175 6 158 4.81e-52 175
MS.gene71875.t1 AT5G46590 60.769 130 48 2 23 150 6 134 5.09e-52 175
MS.gene71875.t1 AT3G15500 54.717 159 62 3 23 178 14 165 8.41e-52 176
MS.gene71875.t1 AT1G52890 54.717 159 62 3 23 178 14 165 9.55e-52 175
MS.gene71875.t1 AT1G26870 48.851 174 82 1 12 178 5 178 2.32e-51 177
MS.gene71875.t1 AT5G17260 56.129 155 63 3 23 175 6 157 5.15e-51 177
MS.gene71875.t1 AT3G15510 52.795 161 67 3 27 178 21 181 6.63e-51 174
MS.gene71875.t1 AT3G10480 55.901 161 62 4 23 179 27 182 1.69e-50 176
MS.gene71875.t1 AT3G10490 54.088 159 68 3 23 179 27 182 3.77e-50 169
MS.gene71875.t1 AT3G10480 56.250 160 62 4 23 179 27 181 4.52e-50 174
MS.gene71875.t1 AT4G35580 44.215 242 96 9 23 255 9 220 2.59e-49 174
MS.gene71875.t1 AT4G35580 44.215 242 96 9 23 255 9 220 3.62e-49 174
MS.gene71875.t1 AT4G35580 44.215 242 96 9 23 255 9 220 3.91e-49 174
MS.gene71875.t1 AT4G27410 48.619 181 71 4 23 186 14 189 4.18e-49 168
MS.gene71875.t1 AT4G17980 52.258 155 72 1 23 175 6 160 4.62e-49 167
MS.gene71875.t1 AT4G17980 52.258 155 72 1 23 175 6 160 4.81e-49 167
MS.gene71875.t1 AT5G13180 48.466 163 78 2 18 180 9 165 2.06e-48 164
MS.gene71875.t1 AT3G10490 54.088 159 68 3 23 179 27 182 2.23e-48 170
MS.gene71875.t1 AT1G33060 60.150 133 49 2 23 153 24 154 3.99e-48 173
MS.gene71875.t1 AT1G33060 60.150 133 49 2 23 153 24 154 4.48e-48 173
MS.gene71875.t1 AT1G52880 51.875 160 69 2 27 178 21 180 1.15e-47 165
MS.gene71875.t1 AT2G02450 52.980 151 66 2 25 175 53 198 1.44e-47 166
MS.gene71875.t1 AT2G02450 52.980 151 66 2 25 175 53 198 1.67e-47 167
MS.gene71875.t1 AT5G24590 47.486 179 79 4 11 182 1 171 6.62e-47 166
MS.gene71875.t1 AT2G33480 49.398 166 77 3 17 182 9 167 3.36e-46 159
MS.gene71875.t1 AT2G33480 49.398 166 75 3 17 182 9 165 6.54e-46 159
MS.gene71875.t1 AT3G10480 46.907 194 61 4 23 179 27 215 9.16e-46 164
MS.gene71875.t1 AT2G43000 39.604 202 111 4 25 218 20 218 1.04e-45 158
MS.gene71875.t1 AT1G34180 48.734 158 73 4 25 179 18 170 3.29e-45 161
MS.gene71875.t1 AT1G32870 52.830 159 69 3 23 179 10 164 4.04e-45 163
MS.gene71875.t1 AT1G32870 52.830 159 69 3 23 179 10 164 4.17e-45 162
MS.gene71875.t1 AT3G49530 53.901 141 62 2 11 149 1 140 7.78e-45 159
MS.gene71875.t1 AT1G32870 52.830 159 69 3 23 179 46 200 1.11e-44 162
MS.gene71875.t1 AT1G34190 48.734 158 73 4 25 179 18 170 1.20e-44 162
MS.gene71875.t1 AT1G34180 48.734 158 73 4 25 179 18 170 1.41e-44 162
MS.gene71875.t1 AT3G49530 53.901 141 62 2 11 149 1 140 1.43e-44 160
MS.gene71875.t1 AT5G64060 45.625 160 79 4 23 179 6 160 1.35e-43 155
MS.gene71875.t1 AT1G34180 45.294 170 73 4 25 179 18 182 2.23e-43 157
MS.gene71875.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.62e-43 157
MS.gene71875.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.62e-43 157
MS.gene71875.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.62e-43 157
MS.gene71875.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.62e-43 157
MS.gene71875.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.62e-43 157
MS.gene71875.t1 AT1G34180 45.294 170 73 4 25 179 18 182 8.20e-43 157
MS.gene71875.t1 AT1G32510 43.564 202 86 6 23 211 6 192 1.74e-42 150
MS.gene71875.t1 AT3G12977 58.197 122 46 3 70 190 12 129 6.09e-42 147
MS.gene71875.t1 AT2G27300 52.672 131 59 2 23 152 14 142 1.19e-41 149
MS.gene71875.t1 AT2G17040 52.756 127 59 1 25 150 8 134 4.82e-41 146
MS.gene71875.t1 AT1G56010 43.939 198 74 8 72 267 2 164 5.30e-40 143
MS.gene71875.t1 AT3G12910 48.592 142 69 3 12 150 10 150 7.07e-39 141
MS.gene71875.t1 AT5G22290 38.798 183 101 3 25 206 23 195 1.44e-38 141
MS.gene71875.t1 AT4G10350 50.000 146 62 4 68 210 7 144 7.59e-37 135
MS.gene71875.t1 AT3G44290 43.478 161 78 4 25 184 16 164 2.21e-36 132
MS.gene71875.t1 AT4G28530 50.000 128 48 1 23 134 10 137 2.21e-36 135
MS.gene71875.t1 AT3G44290 43.478 161 78 4 25 184 16 164 1.17e-35 133
MS.gene71875.t1 AT5G04395 45.638 149 67 2 16 150 21 169 2.41e-35 128
MS.gene71875.t1 AT2G33480 50.467 107 49 2 76 182 8 110 6.78e-27 106
MS.gene71875.t1 AT5G64530 41.406 128 63 2 23 150 3 118 6.77e-26 102
MS.gene71875.t1 AT4G01550 38.994 159 86 5 26 180 7 158 9.03e-26 108
MS.gene71875.t1 AT5G64530 35.758 165 82 3 23 175 3 155 1.58e-25 102
MS.gene71875.t1 AT3G04420 41.860 129 69 3 24 148 4 130 2.07e-25 104
MS.gene71875.t1 AT3G04420 41.860 129 69 3 24 148 4 130 4.54e-25 104
MS.gene71875.t1 AT1G02230 38.028 142 80 4 24 160 4 142 9.77e-25 104
MS.gene71875.t1 AT4G01520 33.503 197 110 7 24 215 5 185 3.73e-24 101
MS.gene71875.t1 AT3G44350 32.673 202 124 6 22 215 4 201 7.61e-24 99.4
MS.gene71875.t1 AT5G22380 40.310 129 70 3 26 148 8 135 1.25e-23 98.6
MS.gene71875.t1 AT3G44350 38.346 133 76 3 22 149 4 135 1.86e-23 95.9
MS.gene71875.t1 AT4G01540 33.846 195 108 7 26 215 7 185 2.22e-23 101
MS.gene71875.t1 AT4G01540 33.846 195 108 7 26 215 7 185 2.36e-23 100
MS.gene71875.t1 AT4G01540 33.846 195 108 7 26 215 7 185 6.02e-23 100
MS.gene71875.t1 AT4G01540 33.846 195 108 7 26 215 7 185 6.31e-23 100
MS.gene71875.t1 AT1G02250 39.231 130 71 4 24 148 4 130 2.59e-22 97.4
MS.gene71875.t1 AT3G10490 55.952 84 34 2 96 179 2 82 3.98e-21 94.0
MS.gene71875.t1 AT3G10490 55.952 84 34 2 96 179 2 82 3.98e-21 94.0
MS.gene71875.t1 AT1G02220 39.535 129 69 4 24 148 4 127 1.52e-20 92.8
MS.gene71875.t1 AT2G18060 46.237 93 38 3 101 190 2 85 3.02e-20 90.1
MS.gene71875.t1 AT2G43000 33.803 142 83 4 84 217 1 139 2.01e-18 83.2
MS.gene71875.t1 AT1G01010 35.152 165 88 7 26 180 6 161 9.85e-18 84.7
MS.gene71875.t1 AT5G14000 33.537 164 96 5 18 178 10 163 4.18e-17 79.7
MS.gene71875.t1 AT5G14000 36.232 138 80 4 18 152 10 142 4.55e-16 75.5
MS.gene71875.t1 AT5G50820 34.483 145 67 6 17 150 11 138 3.33e-15 73.9
MS.gene71875.t1 AT5G22290 37.143 105 56 2 102 206 2 96 8.82e-15 73.9
MS.gene71875.t1 AT1G28470 34.054 185 92 10 8 173 61 234 6.38e-14 72.4
MS.gene71875.t1 AT3G56530 32.576 132 84 3 23 151 52 181 9.94e-14 72.0
MS.gene71875.t1 AT3G04430 34.091 132 73 5 29 148 6 135 1.39e-12 66.6
MS.gene71875.t1 AT4G28500 31.383 188 99 8 23 191 59 235 6.92e-12 66.2
MS.gene71875.t1 AT3G01600 34.000 150 77 6 23 153 55 201 1.76e-11 65.5

Find 86 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGAGTTTGAGGCTATTT+TGG 0.142515 2.2:+15934262 None:intergenic
GAGCAACAGAAGCTGGTTAT+TGG 0.282927 2.2:-15935173 MS.gene71875:CDS
CTTTAGATCAGTGTTGTTGC+TGG 0.285167 2.2:+15934100 None:intergenic
GGTCTTAACATTGGAGGATT+AGG 0.286533 2.2:-15933753 MS.gene71875:CDS
GTGGTGATATTCTTGGTGGC+TGG 0.323001 2.2:-15933821 MS.gene71875:CDS
AAGACTCATGCTGTTGTTGC+TGG 0.361273 2.2:+15934241 None:intergenic
TCCATTGTTGCATTCATAGA+AGG 0.370477 2.2:+15933975 None:intergenic
GCTGGTTATTGGAAAGCAAC+TGG 0.387538 2.2:-15935162 MS.gene71875:CDS
CAAAAGAGTAACACTGGAAA+TGG 0.388031 2.2:-15934329 MS.gene71875:CDS
TGGTGATATTCTTGGTGGCT+GGG 0.390544 2.2:-15933820 MS.gene71875:CDS
TTGAATTCATGAAGGATGAA+TGG 0.403950 2.2:-15934370 MS.gene71875:intron
TTTAACAGAGAAAGCTAAGA+TGG 0.415039 2.2:-15935262 MS.gene71875:intron
CTGTTGAAGTTGTTATGAAC+AGG 0.422669 2.2:+15934029 None:intergenic
GCGGTGCTAGCGGCGGTGTA+AGG 0.433541 2.2:+15934161 None:intergenic
AGGCTGCGCCGCAGCCGCCG+AGG 0.437536 2.2:+15933860 None:intergenic
GGTGATATTCTTGGTGGCTG+GGG 0.437635 2.2:-15933819 MS.gene71875:CDS
GAAGAAGGTGAACTTGGTTC+AGG 0.444043 2.2:+15934215 None:intergenic
GGTGGTGGTGGTGATATTCT+TGG 0.450540 2.2:-15933828 MS.gene71875:CDS
GTGGTGGTTGACAGTGGTGG+TGG 0.451556 2.2:-15933774 MS.gene71875:CDS
GGATGCCGGCGGAGGAGCAA+AGG 0.452173 2.2:-15933797 MS.gene71875:CDS
TGTAGATGTTGTGGAGAAAC+AGG 0.459674 2.2:+15934067 None:intergenic
TGAATTCATGAAGGATGAAT+GGG 0.460212 2.2:-15934369 MS.gene71875:intron
GGCGGAGGAGCAAAGGGTGG+TGG 0.469260 2.2:-15933790 MS.gene71875:CDS
GCTAGGTTTCAGAGGAATGT+TGG 0.470321 2.2:-15933945 MS.gene71875:CDS
TACTGTTGTTGTTCATGTGA+TGG 0.472131 2.2:+15935540 None:intergenic
TGTTCATGTGATGGTGGTGA+TGG 0.472632 2.2:+15935549 None:intergenic
CTAAGATGGGTGAGAAAGAA+TGG 0.473003 2.2:-15935248 MS.gene71875:CDS
GTTGTTGCTGGCTGAGTTTG+AGG 0.477482 2.2:+15934253 None:intergenic
CCACCACCACCACCGGGAAA+AGG 0.477721 2.2:+15933840 None:intergenic
GTGATGAGTTCTTCATCTGT+TGG 0.479915 2.2:+15935473 None:intergenic
TGATGAGTTCTTCATCTGTT+GGG 0.481156 2.2:+15935474 None:intergenic
GATGCCGGCGGAGGAGCAAA+GGG 0.483796 2.2:-15933796 MS.gene71875:CDS
ACTTGTGGTGGCGGCTGTCA+CGG 0.486077 2.2:+15934298 None:intergenic
CTCTTCCTCTATAGAAAACA+AGG 0.487943 2.2:+15935082 None:intergenic
TTCCTCTGAAACCTAGCAAA+AGG 0.489285 2.2:+15933951 None:intergenic
TAAACTGAAGAAGGTGAACT+TGG 0.494439 2.2:+15934209 None:intergenic
CAGCAACAACACTGATCTAA+AGG 0.495202 2.2:-15934099 MS.gene71875:CDS
ATGCATGAATACCGTCTTGA+AGG 0.495598 2.2:-15935030 MS.gene71875:CDS
CGTGACAGAAAGTATCCAAC+TGG 0.496401 2.2:-15935210 MS.gene71875:CDS
CTTCTGAGCTTGACTGCATG+TGG 0.509536 2.2:-15933728 MS.gene71875:CDS
GTGATATTCTTGGTGGCTGG+GGG 0.509670 2.2:-15933818 MS.gene71875:CDS
GGAGATGAATCAAGAAGAGG+TGG 0.516437 2.2:+15934182 None:intergenic
ACAAATAGAGCAACAGAAGC+TGG 0.519833 2.2:-15935180 MS.gene71875:CDS
GGTGGAAGGTAAACTGAAGA+AGG 0.531666 2.2:+15934200 None:intergenic
GCTAGCACCGCCACATTCAA+CGG 0.535034 2.2:-15934149 MS.gene71875:CDS
GTTGAGATCAACTTCAGCTA+TGG 0.539738 2.2:+15935403 None:intergenic
ACCACCCTTTGCTCCTCCGC+CGG 0.540834 2.2:+15933792 None:intergenic
GGTGGTGGTCTTAACATTGG+AGG 0.544599 2.2:-15933759 MS.gene71875:CDS
GGTGGTGGTGATATTCTTGG+TGG 0.546301 2.2:-15933825 MS.gene71875:CDS
ATTTGATGTTGTAGATGTTG+TGG 0.550821 2.2:+15934058 None:intergenic
TCTTGTAGTGACCTCAAGCT+AGG 0.554276 2.2:+15933909 None:intergenic
TTATTACCAGGTAGCTCCCA+TGG 0.555008 2.2:+15935371 None:intergenic
ACCTTCTATGAATGCAACAA+TGG 0.562153 2.2:-15933976 MS.gene71875:CDS
CTGGTTATTGGAAAGCAACT+GGG 0.564046 2.2:-15935161 MS.gene71875:CDS
CTATTTGTACGCAAACCAGT+TGG 0.564828 2.2:+15935195 None:intergenic
TTAACAGAGAAAGCTAAGAT+GGG 0.570864 2.2:-15935261 MS.gene71875:intron
TATGGCTCTTGCAGTGAAAG+TGG 0.573657 2.2:+15935421 None:intergenic
CATTTGACCACCGTTGAATG+TGG 0.575010 2.2:+15934139 None:intergenic
TGTGAACCATGGGAGCTACC+TGG 0.581438 2.2:-15935377 MS.gene71875:intron
GTGACAGCCGCCACCACAAG+TGG 0.583090 2.2:-15934296 MS.gene71875:CDS
TGTTGTTGTTCATGTGATGG+TGG 0.584890 2.2:+15935543 None:intergenic
TATAGAGGAAGAGCTCCTAA+AGG 0.593763 2.2:-15935072 MS.gene71875:CDS
TAAGGAGATGAATCAAGAAG+AGG 0.594247 2.2:+15934179 None:intergenic
GTTGAATGTGGCGGTGCTAG+CGG 0.596301 2.2:+15934151 None:intergenic
AGTGATGCACATTTACCACC+TGG 0.600350 2.2:-15935509 MS.gene71875:CDS
TCTCAACAAGTGTGAACCAT+GGG 0.603575 2.2:-15935387 MS.gene71875:CDS
ATGAATCAAGAAGAGGTGGA+AGG 0.605273 2.2:+15934186 None:intergenic
AGGGTGGTGGTTGACAGTGG+TGG 0.606408 2.2:-15933777 MS.gene71875:CDS
CAAAGGGTGGTGGTTGACAG+TGG 0.611515 2.2:-15933780 MS.gene71875:CDS
GTGTTTCAAAAGAGTAACAC+TGG 0.613580 2.2:-15934335 MS.gene71875:CDS
GCCGGCGGAGGAGCAAAGGG+TGG 0.622038 2.2:-15933793 MS.gene71875:CDS
GTTGGGTGGAAACGAAAACC+AGG 0.623151 2.2:+15935491 None:intergenic
AAGCAAATTTGCCTTCAAGA+CGG 0.624374 2.2:+15935019 None:intergenic
AACTTCAACAGCAACAACAA+TGG 0.624816 2.2:-15934017 MS.gene71875:CDS
GTACCTTGGAGTTTCTAGAG+AGG 0.626435 2.2:+15934989 None:intergenic
CTTCCTCTCTAGAAACTCCA+AGG 0.629367 2.2:-15934992 MS.gene71875:intron
TGAGTTCTTCATCTGTTGGG+TGG 0.631374 2.2:+15935477 None:intergenic
AGTGGTGGTGGTCTTAACAT+TGG 0.644378 2.2:-15933762 MS.gene71875:CDS
ATCTCAACAAGTGTGAACCA+TGG 0.644661 2.2:-15935388 MS.gene71875:CDS
GAATGTGGCGGTGCTAGCGG+CGG 0.652046 2.2:+15934154 None:intergenic
TCTTCCTCTATAGAAAACAA+GGG 0.657078 2.2:+15935083 None:intergenic
TGTGGTGGCGGCTGTCACGG+TGG 0.673416 2.2:+15934301 None:intergenic
TTGACCACCGTTGAATGTGG+CGG 0.686693 2.2:+15934142 None:intergenic
TGTTGAAGTTGTTATGAACA+GGG 0.693459 2.2:+15934030 None:intergenic
AGCACCGCCACATTCAACGG+TGG 0.723687 2.2:-15934146 MS.gene71875:CDS
GGGTGGAAACGAAAACCAGG+TGG 0.775610 2.2:+15935494 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAAAGAAAAATAAAA+AGG + chr2.2:15933961-15933980 None:intergenic 10.0%
!! TTCATAAAGAAAAATAAAAA+GGG + chr2.2:15933960-15933979 None:intergenic 10.0%
!! TTAGAAAAGTTAACTTTATA+TGG + chr2.2:15933984-15934003 None:intergenic 15.0%
!!! TTTTGAAAAATTAATGTGAA+TGG + chr2.2:15934689-15934708 None:intergenic 15.0%
!! AAAATTAATGTGAATGGTTA+TGG + chr2.2:15934683-15934702 None:intergenic 20.0%
!!! ATGTATTTTTGAATTCATGA+AGG - chr2.2:15934904-15934923 MS.gene71875:intron 20.0%
! TAAAGGTGAAAAAAGTAACT+GGG - chr2.2:15934227-15934246 MS.gene71875:CDS 25.0%
! TGAAAGAAAAATTAGTACCT+TGG + chr2.2:15934310-15934329 None:intergenic 25.0%
!! ATTGATGATAAGTTATTACC+AGG + chr2.2:15933926-15933945 None:intergenic 25.0%
!! CTGTTTATAAAGTGAGATTT+TGG + chr2.2:15934825-15934844 None:intergenic 25.0%
!!! GGAATCTTGTTTTTCTTAAT+AGG - chr2.2:15934460-15934479 MS.gene71875:intron 25.0%
ATTTGATGTTGTAGATGTTG+TGG + chr2.2:15935227-15935246 None:intergenic 30.0%
CAAAATGAAACTGGTGAAAA+TGG + chr2.2:15934753-15934772 None:intergenic 30.0%
CTAAAGGTGAAAAAAGTAAC+TGG - chr2.2:15934226-15934245 MS.gene71875:CDS 30.0%
TAATAGGCTTCTATATGCAT+TGG - chr2.2:15934476-15934495 MS.gene71875:intron 30.0%
TCAAAAACTTACTCTCTTGT+TGG - chr2.2:15934165-15934184 MS.gene71875:CDS 30.0%
TCTTCCTCTATAGAAAACAA+GGG + chr2.2:15934202-15934221 None:intergenic 30.0%
TGAATTCATGAAGGATGAAT+GGG - chr2.2:15934913-15934932 MS.gene71875:intron 30.0%
TGTTAATGGTTATTACCCTA+TGG - chr2.2:15934603-15934622 MS.gene71875:intron 30.0%
TGTTGAAGTTGTTATGAACA+GGG + chr2.2:15935255-15935274 None:intergenic 30.0%
TTAACAGAGAAAGCTAAGAT+GGG - chr2.2:15934021-15934040 MS.gene71875:CDS 30.0%
TTGAATTCATGAAGGATGAA+TGG - chr2.2:15934912-15934931 MS.gene71875:intron 30.0%
TTTAACAGAGAAAGCTAAGA+TGG - chr2.2:15934020-15934039 MS.gene71875:CDS 30.0%
TTTCAAAAGACTAGAGAGAT+AGG - chr2.2:15934436-15934455 MS.gene71875:intron 30.0%
!! CTTTTGAAAGGATCAAAATG+CGG + chr2.2:15934425-15934444 None:intergenic 30.0%
!! GTTGATGATTTATCTCGATT+AGG - chr2.2:15934513-15934532 MS.gene71875:intron 30.0%
!! TATCTCTCTAGTCTTTTGAA+AGG + chr2.2:15934437-15934456 None:intergenic 30.0%
!! TTTGGTAGAAAAAGCATTGT+TGG + chr2.2:15934807-15934826 None:intergenic 30.0%
!!! AAAACCCTTGTTTTCTATAG+AGG - chr2.2:15934195-15934214 MS.gene71875:CDS 30.0%
!!! CAGTTACTTTTTTCACCTTT+AGG + chr2.2:15934228-15934247 None:intergenic 30.0%
!!! TGTCAAGAACTTTTTTGAGA+AGG + chr2.2:15933841-15933860 None:intergenic 30.0%
AAACTCTTACATGCACCATA+GGG + chr2.2:15934621-15934640 None:intergenic 35.0%
AACCCTATGCAAAATGAAAC+TGG + chr2.2:15934762-15934781 None:intergenic 35.0%
AACTTCAACAGCAACAACAA+TGG - chr2.2:15935265-15935284 MS.gene71875:intron 35.0%
AAGCAAATTTGCCTTCAAGA+CGG + chr2.2:15934266-15934285 None:intergenic 35.0%
ACCTTCTATGAATGCAACAA+TGG - chr2.2:15935306-15935325 MS.gene71875:intron 35.0%
ACGCATCGTTTACATGTTAA+TGG - chr2.2:15934589-15934608 MS.gene71875:intron 35.0%
CAAAAGAGTAACACTGGAAA+TGG - chr2.2:15934953-15934972 MS.gene71875:intron 35.0%
CTCTTCCTCTATAGAAAACA+AGG + chr2.2:15934203-15934222 None:intergenic 35.0%
CTGTTGAAGTTGTTATGAAC+AGG + chr2.2:15935256-15935275 None:intergenic 35.0%
GTGAATACATGAGTTTGCAT+GGG - chr2.2:15934655-15934674 MS.gene71875:intron 35.0%
GTGTTTCAAAAGAGTAACAC+TGG - chr2.2:15934947-15934966 MS.gene71875:intron 35.0%
TAAACTGAAGAAGGTGAACT+TGG + chr2.2:15935076-15935095 None:intergenic 35.0%
TAAGGAGATGAATCAAGAAG+AGG + chr2.2:15935106-15935125 None:intergenic 35.0%
TCCATTGTTGCATTCATAGA+AGG + chr2.2:15935310-15935329 None:intergenic 35.0%
TGATGAGTTCTTCATCTGTT+GGG + chr2.2:15933811-15933830 None:intergenic 35.0%
TGTGAATACATGAGTTTGCA+TGG - chr2.2:15934654-15934673 MS.gene71875:intron 35.0%
! CACCAGTTTCATTTTGCATA+GGG - chr2.2:15934757-15934776 MS.gene71875:intron 35.0%
! TACTGTTGTTGTTCATGTGA+TGG + chr2.2:15933745-15933764 None:intergenic 35.0%
! TCACCAGTTTCATTTTGCAT+AGG - chr2.2:15934756-15934775 MS.gene71875:intron 35.0%
ACAAATAGAGCAACAGAAGC+TGG - chr2.2:15934102-15934121 MS.gene71875:CDS 40.0%
ATCTCAACAAGTGTGAACCA+TGG - chr2.2:15933894-15933913 MS.gene71875:CDS 40.0%
ATGAATCAAGAAGAGGTGGA+AGG + chr2.2:15935099-15935118 None:intergenic 40.0%
ATGCATGAATACCGTCTTGA+AGG - chr2.2:15934252-15934271 MS.gene71875:CDS 40.0%
CAAAAGACTAGAGAGATAGG+TGG - chr2.2:15934439-15934458 MS.gene71875:intron 40.0%
CAGCAACAACACTGATCTAA+AGG - chr2.2:15935183-15935202 MS.gene71875:CDS 40.0%
CTAAGATGGGTGAGAAAGAA+TGG - chr2.2:15934034-15934053 MS.gene71875:CDS 40.0%
CTATTTGTACGCAAACCAGT+TGG + chr2.2:15934090-15934109 None:intergenic 40.0%
CTGGTTATTGGAAAGCAACT+GGG - chr2.2:15934121-15934140 MS.gene71875:CDS 40.0%
GAAACTCTTACATGCACCAT+AGG + chr2.2:15934622-15934641 None:intergenic 40.0%
GGTCTTAACATTGGAGGATT+AGG - chr2.2:15935529-15935548 MS.gene71875:CDS 40.0%
GTGATGAGTTCTTCATCTGT+TGG + chr2.2:15933812-15933831 None:intergenic 40.0%
GTTGAGATCAACTTCAGCTA+TGG + chr2.2:15933882-15933901 None:intergenic 40.0%
TATAGAGGAAGAGCTCCTAA+AGG - chr2.2:15934210-15934229 MS.gene71875:CDS 40.0%
TCTCAACAAGTGTGAACCAT+GGG - chr2.2:15933895-15933914 MS.gene71875:CDS 40.0%
TGTAGATGTTGTGGAGAAAC+AGG + chr2.2:15935218-15935237 None:intergenic 40.0%
! ATCCTTTTGCTAGGTTTCAG+AGG - chr2.2:15935329-15935348 MS.gene71875:intron 40.0%
! CAACAATGGATCCTTTTGCT+AGG - chr2.2:15935320-15935339 MS.gene71875:intron 40.0%
! CTTTAGATCAGTGTTGTTGC+TGG + chr2.2:15935185-15935204 None:intergenic 40.0%
! GCTTCCTTTCTTTTTCTCCT+CGG - chr2.2:15935405-15935424 MS.gene71875:CDS 40.0%
! TGTTGTTGTTCATGTGATGG+TGG + chr2.2:15933742-15933761 None:intergenic 40.0%
!! TTCCTCTGAAACCTAGCAAA+AGG + chr2.2:15935334-15935353 None:intergenic 40.0%
!! TTTCTGCTTTTCCTAGCTTG+AGG - chr2.2:15935362-15935381 MS.gene71875:intron 40.0%
AAGACTCATGCTGTTGTTGC+TGG + chr2.2:15935044-15935063 None:intergenic 45.0%
AGTGATGCACATTTACCACC+TGG - chr2.2:15933773-15933792 MS.gene71875:CDS 45.0%
CATTTGACCACCGTTGAATG+TGG + chr2.2:15935146-15935165 None:intergenic 45.0%
GAAGAAGGTGAACTTGGTTC+AGG + chr2.2:15935070-15935089 None:intergenic 45.0%
GAGCAACAGAAGCTGGTTAT+TGG - chr2.2:15934109-15934128 MS.gene71875:CDS 45.0%
GCTAGGTTTCAGAGGAATGT+TGG - chr2.2:15935337-15935356 MS.gene71875:intron 45.0%
GCTGGTTATTGGAAAGCAAC+TGG - chr2.2:15934120-15934139 MS.gene71875:CDS 45.0%
GGAGATGAATCAAGAAGAGG+TGG + chr2.2:15935103-15935122 None:intergenic 45.0%
GGTGGAAGGTAAACTGAAGA+AGG + chr2.2:15935085-15935104 None:intergenic 45.0%
TATGGCTCTTGCAGTGAAAG+TGG + chr2.2:15933864-15933883 None:intergenic 45.0%
TCTTGTAGTGACCTCAAGCT+AGG + chr2.2:15935376-15935395 None:intergenic 45.0%
TGAGTTCTTCATCTGTTGGG+TGG + chr2.2:15933808-15933827 None:intergenic 45.0%
TTATTACCAGGTAGCTCCCA+TGG + chr2.2:15933914-15933933 None:intergenic 45.0%
! CTTCCTCTCTAGAAACTCCA+AGG - chr2.2:15934290-15934309 MS.gene71875:CDS 45.0%
! GTACCTTGGAGTTTCTAGAG+AGG + chr2.2:15934296-15934315 None:intergenic 45.0%
! TCCTTTCTTTTTCTCCTCGG+CGG - chr2.2:15935408-15935427 MS.gene71875:CDS 45.0%
! TGGTGATATTCTTGGTGGCT+GGG - chr2.2:15935462-15935481 MS.gene71875:CDS 45.0%
!! AGTGGTGGTGGTCTTAACAT+TGG - chr2.2:15935520-15935539 MS.gene71875:CDS 45.0%
!! CGTGACAGAAAGTATCCAAC+TGG - chr2.2:15934072-15934091 MS.gene71875:CDS 45.0%
!! GGCTGAGTTTGAGGCTATTT+TGG + chr2.2:15935023-15935042 None:intergenic 45.0%
!! TGTTCATGTGATGGTGGTGA+TGG + chr2.2:15933736-15933755 None:intergenic 45.0%
!!! CTTTTTTGCACCACTTGTGG+TGG + chr2.2:15934999-15935018 None:intergenic 45.0%
!!! GGTCTTTTTTGCACCACTTG+TGG + chr2.2:15935002-15935021 None:intergenic 45.0%
AATATCACCACCACCACCAC+CGG + chr2.2:15935452-15935471 None:intergenic 50.0%
CTTCTGAGCTTGACTGCATG+TGG - chr2.2:15935554-15935573 MS.gene71875:CDS 50.0%
GTTGGGTGGAAACGAAAACC+AGG + chr2.2:15933794-15933813 None:intergenic 50.0%
TTGACCACCGTTGAATGTGG+CGG + chr2.2:15935143-15935162 None:intergenic 50.0%
! GGTGATATTCTTGGTGGCTG+GGG - chr2.2:15935463-15935482 MS.gene71875:CDS 50.0%
! GGTGGTGGTCTTAACATTGG+AGG - chr2.2:15935523-15935542 MS.gene71875:CDS 50.0%
! GGTGGTGGTGATATTCTTGG+TGG - chr2.2:15935457-15935476 MS.gene71875:CDS 50.0%
! GTGATATTCTTGGTGGCTGG+GGG - chr2.2:15935464-15935483 MS.gene71875:CDS 50.0%
! GTGGTGATATTCTTGGTGGC+TGG - chr2.2:15935461-15935480 MS.gene71875:CDS 50.0%
! GTTGTTGCTGGCTGAGTTTG+AGG + chr2.2:15935032-15935051 None:intergenic 50.0%
! TTTTGCACCACTTGTGGTGG+CGG + chr2.2:15934996-15935015 None:intergenic 50.0%
!! GGTGGTGGTGGTGATATTCT+TGG - chr2.2:15935454-15935473 MS.gene71875:CDS 50.0%
ATATCACCACCACCACCACC+GGG + chr2.2:15935451-15935470 None:intergenic 55.0%
GCCGCCGAGGAGAAAAAGAA+AGG + chr2.2:15935412-15935431 None:intergenic 55.0%
GCTAGCACCGCCACATTCAA+CGG - chr2.2:15935133-15935152 MS.gene71875:CDS 55.0%
GGGTGGAAACGAAAACCAGG+TGG + chr2.2:15933791-15933810 None:intergenic 55.0%
TGTGAACCATGGGAGCTACC+TGG - chr2.2:15933905-15933924 MS.gene71875:CDS 55.0%
! CAAAGGGTGGTGGTTGACAG+TGG - chr2.2:15935502-15935521 MS.gene71875:CDS 55.0%
! GTTGAATGTGGCGGTGCTAG+CGG + chr2.2:15935134-15935153 None:intergenic 55.0%
AGCACCGCCACATTCAACGG+TGG - chr2.2:15935136-15935155 MS.gene71875:CDS 60.0%
GTGGTGGTTGACAGTGGTGG+TGG - chr2.2:15935508-15935527 MS.gene71875:CDS 60.0%
! AGGGTGGTGGTTGACAGTGG+TGG - chr2.2:15935505-15935524 MS.gene71875:CDS 60.0%
! CTTTTTCTCCTCGGCGGCTG+CGG - chr2.2:15935414-15935433 MS.gene71875:CDS 60.0%
!! ACTTGTGGTGGCGGCTGTCA+CGG + chr2.2:15934987-15935006 None:intergenic 60.0%
ACCACCCTTTGCTCCTCCGC+CGG + chr2.2:15935493-15935512 None:intergenic 65.0%
CCACCACCACCACCGGGAAA+AGG + chr2.2:15935445-15935464 None:intergenic 65.0%
GATGCCGGCGGAGGAGCAAA+GGG - chr2.2:15935486-15935505 MS.gene71875:CDS 65.0%
GTGACAGCCGCCACCACAAG+TGG - chr2.2:15934986-15935005 MS.gene71875:intron 65.0%
! GAATGTGGCGGTGCTAGCGG+CGG + chr2.2:15935131-15935150 None:intergenic 65.0%
! TCTTGGTGGCTGGGGGATGC+CGG - chr2.2:15935471-15935490 MS.gene71875:CDS 65.0%
!! CAGCCTTTTCCCGGTGGTGG+TGG - chr2.2:15935439-15935458 MS.gene71875:CDS 65.0%
!!! CCTTTTCCCGGTGGTGGTGG+TGG - chr2.2:15935442-15935461 MS.gene71875:CDS 65.0%
GGATGCCGGCGGAGGAGCAA+AGG - chr2.2:15935485-15935504 MS.gene71875:CDS 70.0%
GGCGGAGGAGCAAAGGGTGG+TGG - chr2.2:15935492-15935511 MS.gene71875:CDS 70.0%
! GCGCAGCCTTTTCCCGGTGG+TGG - chr2.2:15935436-15935455 MS.gene71875:CDS 70.0%
! GCGGTGCTAGCGGCGGTGTA+AGG + chr2.2:15935124-15935143 None:intergenic 70.0%
! GCTGCGGCGCAGCCTTTTCC+CGG - chr2.2:15935430-15935449 MS.gene71875:CDS 70.0%
!! TGTGGTGGCGGCTGTCACGG+TGG + chr2.2:15934984-15935003 None:intergenic 70.0%
GCCGGCGGAGGAGCAAAGGG+TGG - chr2.2:15935489-15935508 MS.gene71875:CDS 75.0%
TGGTGGCTGGGGGATGCCGG+CGG - chr2.2:15935474-15935493 MS.gene71875:CDS 75.0%
! GCGGCGCAGCCTTTTCCCGG+TGG - chr2.2:15935433-15935452 MS.gene71875:CDS 75.0%
! TGGCTGGGGGATGCCGGCGG+AGG - chr2.2:15935477-15935496 MS.gene71875:CDS 80.0%
! AGGCTGCGCCGCAGCCGCCG+AGG + chr2.2:15935425-15935444 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 15933719 15935585 15933719 ID=MS.gene71875
chr2.2 mRNA 15933719 15935585 15933719 ID=MS.gene71875.t1;Parent=MS.gene71875
chr2.2 exon 15935378 15935585 15935378 ID=MS.gene71875.t1.exon1;Parent=MS.gene71875.t1
chr2.2 CDS 15935378 15935585 15935378 ID=cds.MS.gene71875.t1;Parent=MS.gene71875.t1
chr2.2 exon 15934993 15935276 15934993 ID=MS.gene71875.t1.exon2;Parent=MS.gene71875.t1
chr2.2 CDS 15934993 15935276 15934993 ID=cds.MS.gene71875.t1;Parent=MS.gene71875.t1
chr2.2 exon 15933719 15934378 15933719 ID=MS.gene71875.t1.exon3;Parent=MS.gene71875.t1
chr2.2 CDS 15933719 15934378 15933719 ID=cds.MS.gene71875.t1;Parent=MS.gene71875.t1
Gene Sequence

>MS.gene71875

ATGGAAAGCTTCTTCCATCACCACCATCACATGAACAACAACAGTAATAACAACAGTGATGCACATTTACCACCTGGTTTTCGTTTCCACCCAACAGATGAAGAACTCATCACATTCTACCTTCTCAAAAAAGTTCTTGACACCACTTTCACTGCAAGAGCCATAGCTGAAGTTGATCTCAACAAGTGTGAACCATGGGAGCTACCTGGTAATAACTTATCATCAATTATTCAACAAACCCTTTTTATTTTTCTTTATGAATCCATATAAAGTTAACTTTTCTAACACTTTGTTTGATTTTTTTAACAGAGAAAGCTAAGATGGGTGAGAAAGAATGGTACTTCTTCAGTCTACGTGACAGAAAGTATCCAACTGGTTTGCGTACAAATAGAGCAACAGAAGCTGGTTATTGGAAAGCAACTGGGAAAGATAGAGAGATTTATAGCTCAAAAACTTACTCTCTTGTTGGTATGAAGAAAACCCTTGTTTTCTATAGAGGAAGAGCTCCTAAAGGTGAAAAAAGTAACTGGGTTATGCATGAATACCGTCTTGAAGGCAAATTTGCTTATCACTTCCTCTCTAGAAACTCCAAGGTACTAATTTTTCTTTCATTTCTTCATCATAGCTATTTTAATTTAGTGAATTTCAAGTGTTTTCAAGTGTTTTGTAGTGTAGTACTTTGTTGTAATTGTTTGTATATGAGCCGCATTTTGATCCTTTCAAAAGACTAGAGAGATAGGTGGAATCTTGTTTTTCTTAATAGGCTTCTATATGCATTGGTTTCATTTATCAATGTTGATGATTTATCTCGATTAGGATTTGTTGTACTTTTTGAGATGAATGATTACTGCAGAGAATTAATCAATCTTGACGCATCGTTTACATGTTAATGGTTATTACCCTATGGTGCATGTAAGAGTTTCTTATCACACTTTTGTGAATACATGAGTTTGCATGGGAACCATAACCATTCACATTAATTTTTCAAAACTGTATTTTGCTTAAGAGTAGTATATGTACGTATATCACTGCCATTTTCACCAGTTTCATTTTGCATAGGGTTTATCATCAATCATCATTAACTACCAACAATGCTTTTTCTACCAAAATCTCACTTTATAAACAGTTACATAATAAGTTAATAACATGCTTTTGAATTTTGTTTTTATTATAACTAATTCTTACATGTATTTTTGAATTCATGAAGGATGAATGGGTCATTTCACGTGTGTTTCAAAAGAGTAACACTGGAAATGGAAGCACCACCGTGACAGCCGCCACCACAAGTGGTGCAAAAAAGACCAAAATAGCCTCAAACTCAGCCAGCAACAACAGCATGAGTCTTTGTCCTGAACCAAGTTCACCTTCTTCAGTTTACCTTCCACCTCTTCTTGATTCATCTCCTTACACCGCCGCTAGCACCGCCACATTCAACGGTGGTCAAATGTGTAACTACAACAGCTCCAGCAACAACACTGATCTAAAGGAGCACGTGTCCTGTTTCTCCACAACATCTACAACATCAAATGTTGTCCCTGTTCATAACAACTTCAACAGCAACAACAATGGAAGCTTTGATCTTATTTCACCTTCTATGAATGCAACAATGGATCCTTTTGCTAGGTTTCAGAGGAATGTTGGTGTTTCTGCTTTTCCTAGCTTGAGGTCACTACAAGATAATCTTCAGCTTCCTTTCTTTTTCTCCTCGGCGGCTGCGGCGCAGCCTTTTCCCGGTGGTGGTGGTGGTGATATTCTTGGTGGCTGGGGGATGCCGGCGGAGGAGCAAAGGGTGGTGGTTGACAGTGGTGGTGGTCTTAACATTGGAGGATTAGGTTCTTCTGAGCTTGACTGCATGTGGAACTATTAA
Protein sequence

>MS.gene71875.t1

MESFFHHHHHMNNNSNNNSDAHLPPGFRFHPTDEELITFYLLKKVLDTTFTARAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHFLSRNSKDEWVISRVFQKSNTGNGSTTVTAATTSGAKKTKIASNSASNNSMSLCPEPSSPSSVYLPPLLDSSPYTAASTATFNGGQMCNYNSSSNNTDLKEHVSCFSTTSTTSNVVPVHNNFNSNNNGSFDLISPSMNATMDPFARFQRNVGVSAFPSLRSLQDNLQLPFFFSSAAAAQPFPGGGGGDILGGWGMPAEEQRVVVDSGGGLNIGGLGSSELDCMWNY