AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71987

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71987.t1 MTR_4g100380 99.254 268 2 0 1 268 1 268 0.0 541
MS.gene71987.t1 MTR_8g006840 50.000 180 70 6 42 218 36 198 4.59e-48 158
MS.gene71987.t1 MTR_2g015040 46.000 150 46 2 55 202 4 120 1.26e-38 133
MS.gene71987.t1 MTR_4g088005 44.366 142 42 1 61 202 10 114 1.82e-36 126
MS.gene71987.t1 MTR_8g006815 61.000 100 39 0 138 237 89 188 9.07e-35 124
MS.gene71987.t1 MTR_1g090290 50.459 109 54 0 116 224 84 192 3.88e-33 120
MS.gene71987.t1 MTR_8g006825 67.901 81 26 0 143 223 94 174 1.01e-32 119
MS.gene71987.t1 MTR_4g100450 54.622 119 34 3 88 206 117 215 1.18e-32 121
MS.gene71987.t1 MTR_4g100420 69.620 79 22 1 129 207 143 219 1.30e-31 119
MS.gene71987.t1 MTR_7g021010 75.385 65 15 1 141 205 47 110 2.00e-29 109
MS.gene71987.t1 MTR_2g015050 60.000 85 33 1 120 203 108 192 2.28e-29 112
MS.gene71987.t1 MTR_1g048610 58.621 87 31 1 142 223 86 172 3.73e-29 110
MS.gene71987.t1 MTR_7g021010 75.385 65 15 1 141 205 8 71 4.90e-29 107
MS.gene71987.t1 MTR_7g020980 75.385 65 15 1 141 205 47 110 1.02e-28 107
MS.gene71987.t1 MTR_7g081795 68.571 70 22 0 138 207 53 122 1.72e-28 108
MS.gene71987.t1 MTR_7g081815 72.308 65 18 0 143 207 59 123 3.69e-28 107
MS.gene71987.t1 MTR_1g070070 81.034 58 11 0 145 202 21 78 4.02e-28 105
MS.gene71987.t1 MTR_7g081805 68.056 72 21 1 143 212 59 130 5.08e-28 107
MS.gene71987.t1 MTR_7g096750 81.034 58 11 0 145 202 20 77 3.79e-27 102
MS.gene71987.t1 MTR_4g054740 57.303 89 30 2 125 205 69 157 6.87e-27 104
MS.gene71987.t1 MTR_7g096700 79.310 58 12 0 145 202 20 77 2.28e-26 100
MS.gene71987.t1 MTR_1g074310 63.014 73 24 1 133 202 6 78 4.81e-26 100
MS.gene71987.t1 MTR_1g074230 72.581 62 17 0 145 206 19 80 1.12e-25 99.0
MS.gene71987.t1 MTR_4g054360 75.862 58 14 0 145 202 124 181 2.32e-25 101
MS.gene71987.t1 MTR_4g078710 55.670 97 33 3 144 240 27 113 3.18e-25 100
MS.gene71987.t1 MTR_4g054860 48.305 118 44 4 146 248 132 247 5.12e-25 100
MS.gene71987.t1 MTR_8g092460 56.667 90 30 2 143 232 143 223 1.01e-24 100
MS.gene71987.t1 MTR_1g070020 49.533 107 51 2 145 250 70 174 1.01e-24 98.6
MS.gene71987.t1 MTR_1g074370 41.497 147 48 1 59 205 25 133 1.50e-24 98.2
MS.gene71987.t1 MTR_1g070035 54.545 88 36 2 116 203 52 135 1.52e-24 98.2
MS.gene71987.t1 MTR_1g069985 67.742 62 20 0 143 204 73 134 1.95e-24 97.8
MS.gene71987.t1 MTR_1g070045 65.152 66 23 0 139 204 60 125 2.14e-24 96.7
MS.gene71987.t1 MTR_1g070000 68.966 58 18 0 147 204 86 143 3.33e-24 97.4
MS.gene71987.t1 MTR_1g040430 61.765 68 26 0 152 219 118 185 3.38e-24 96.7
MS.gene71987.t1 MTR_1g070015 68.333 60 19 0 145 204 84 143 4.74e-24 97.1
MS.gene71987.t1 MTR_5g009620 69.697 66 17 2 138 201 103 167 3.64e-23 96.7
MS.gene71987.t1 MTR_4g086165 71.429 63 17 1 141 203 78 139 3.79e-23 94.4
MS.gene71987.t1 MTR_5g062700 64.935 77 18 2 134 202 154 229 4.70e-23 97.1
MS.gene71987.t1 MTR_2g078680 55.914 93 31 3 141 233 27 109 8.34e-23 93.2
MS.gene71987.t1 MTR_4g086160 74.576 59 14 1 145 203 96 153 1.28e-22 93.2
MS.gene71987.t1 MTR_1g090170 64.706 68 23 1 135 202 142 208 2.10e-22 94.4
MS.gene71987.t1 MTR_2g435590 74.138 58 14 1 145 202 96 152 2.42e-22 93.2
MS.gene71987.t1 MTR_5g085100 68.182 66 20 1 138 203 39 103 2.50e-22 93.6
MS.gene71987.t1 MTR_2g438180 68.966 58 18 0 145 202 14 71 3.68e-22 89.4
MS.gene71987.t1 MTR_1g090170 64.706 68 23 1 135 202 229 295 4.08e-22 94.7
MS.gene71987.t1 MTR_3g090760 70.000 60 17 1 142 201 110 168 4.77e-22 94.0
MS.gene71987.t1 MTR_7g096810 65.714 70 21 1 133 202 4 70 7.16e-22 88.6
MS.gene71987.t1 MTR_1g074250 60.256 78 27 3 133 206 4 81 7.21e-22 88.6
MS.gene71987.t1 MTR_4g086220 72.881 59 15 1 145 203 96 153 7.74e-22 91.3
MS.gene71987.t1 MTR_2g014340 61.765 68 25 1 140 207 14 80 8.16e-22 90.5
MS.gene71987.t1 MTR_4g086190 72.881 59 15 1 145 203 96 153 1.10e-21 90.9
MS.gene71987.t1 MTR_3g074130 60.256 78 20 2 135 202 130 206 1.19e-21 92.8
MS.gene71987.t1 MTR_2g105380 56.667 90 32 3 119 202 85 173 1.20e-21 93.2
MS.gene71987.t1 MTR_5g085070 67.188 64 20 1 140 203 46 108 1.44e-21 91.7
MS.gene71987.t1 MTR_2g014300 69.492 59 17 1 144 202 14 71 1.84e-21 89.0
MS.gene71987.t1 MTR_3g053690 65.278 72 22 2 135 204 15 85 1.97e-21 90.1
MS.gene71987.t1 MTR_1g087920 70.690 58 16 1 145 202 77 133 2.04e-21 91.7
MS.gene71987.t1 MTR_8g022820 67.742 62 19 1 141 202 119 179 3.16e-21 92.0
MS.gene71987.t1 MTR_8g022820 67.742 62 19 1 141 202 120 180 3.32e-21 92.0
MS.gene71987.t1 MTR_8g022820 67.742 62 19 1 141 202 120 180 3.32e-21 92.0
MS.gene71987.t1 MTR_4g114570 48.515 101 50 2 140 240 2 100 3.91e-21 89.0
MS.gene71987.t1 MTR_3g098580 66.667 81 26 1 128 208 59 138 4.00e-21 90.1
MS.gene71987.t1 MTR_2g090235 63.768 69 23 2 135 202 207 274 5.58e-21 92.0
MS.gene71987.t1 MTR_8g090350 60.563 71 27 1 143 213 111 180 7.21e-21 89.7
MS.gene71987.t1 MTR_1g069960 72.414 58 16 0 145 202 27 84 1.01e-20 86.3
MS.gene71987.t1 MTR_8g099215 68.333 60 18 1 142 201 104 162 1.99e-20 89.0
MS.gene71987.t1 MTR_1g043350 40.845 142 46 2 62 203 37 140 2.41e-20 87.0
MS.gene71987.t1 MTR_1g069945 42.177 147 70 3 123 266 84 218 8.69e-20 86.3
MS.gene71987.t1 MTR_7g084370 70.000 60 17 1 142 201 39 97 8.72e-20 86.7
MS.gene71987.t1 MTR_5g075570 55.405 74 30 2 132 203 109 181 1.50e-19 86.3
MS.gene71987.t1 MTR_2g089170 67.797 59 18 1 144 202 64 121 2.06e-19 83.6
MS.gene71987.t1 MTR_1g028560 50.000 102 44 4 136 231 104 204 5.12e-19 85.5
MS.gene71987.t1 MTR_7g096830 42.105 152 64 5 125 254 70 219 9.74e-19 83.2
MS.gene71987.t1 MTR_1g069940 45.736 129 49 4 123 236 78 200 1.05e-18 83.2
MS.gene71987.t1 MTR_7g096780 72.131 61 17 0 145 205 85 145 1.14e-18 82.8
MS.gene71987.t1 MTR_8g069360 68.421 57 17 1 145 201 44 99 2.04e-18 84.7
MS.gene71987.t1 MTR_3g106290 62.903 62 22 1 145 206 8 68 5.20e-18 80.1
MS.gene71987.t1 MTR_7g092190 54.667 75 25 2 136 202 13 86 5.24e-18 82.0
MS.gene71987.t1 MTR_5g032820 49.462 93 43 2 145 237 46 134 5.55e-18 82.8
MS.gene71987.t1 MTR_3g095190 58.696 92 32 2 127 218 157 242 6.76e-18 82.4
MS.gene71987.t1 MTR_2g019750 51.220 82 38 2 134 215 40 119 6.79e-18 81.6
MS.gene71987.t1 MTR_0939s0010 66.102 59 19 1 144 202 64 121 7.15e-18 79.7
MS.gene71987.t1 MTR_4g119270 63.158 57 20 1 145 201 53 108 8.34e-18 82.0
MS.gene71987.t1 MTR_4g010640 58.824 68 27 1 140 207 2 68 1.15e-17 79.7
MS.gene71987.t1 MTR_2g103700 59.091 66 26 1 140 205 2 66 1.78e-17 78.2
MS.gene71987.t1 MTR_5g082950 70.175 57 16 1 145 201 66 121 2.35e-17 80.9
MS.gene71987.t1 MTR_5g083340 67.241 58 18 1 145 202 85 141 2.99e-17 80.9
MS.gene71987.t1 MTR_4g008860 59.375 64 25 1 143 206 6 68 3.25e-17 78.2
MS.gene71987.t1 MTR_4g111915 41.964 112 58 4 102 211 9 115 3.33e-17 76.6
MS.gene71987.t1 MTR_8g006410 52.703 74 33 2 145 218 52 123 1.06e-16 77.0
MS.gene71987.t1 MTR_5g083330 57.353 68 28 1 135 202 25 91 1.24e-16 78.2
MS.gene71987.t1 MTR_4g112490 41.964 112 58 4 102 211 9 115 1.46e-16 76.3
MS.gene71987.t1 MTR_6g033255 70.833 72 20 1 141 212 16 86 1.91e-16 76.3
MS.gene71987.t1 MTR_6g088405 60.345 58 22 1 145 202 44 100 4.16e-16 75.5
MS.gene71987.t1 MTR_6g029180 53.521 71 32 1 145 215 33 102 5.54e-16 76.6
MS.gene71987.t1 MTR_3g110205 57.576 66 25 2 143 206 39 103 5.92e-16 74.3
MS.gene71987.t1 MTR_7g070220 45.652 92 36 2 124 201 49 140 6.32e-16 77.4
MS.gene71987.t1 MTR_5g012910 58.730 63 23 2 142 202 23 84 9.19e-16 73.6
MS.gene71987.t1 MTR_7g117690 53.968 63 28 1 145 207 28 89 1.44e-15 72.8
MS.gene71987.t1 MTR_8g085960 35.772 123 75 2 133 255 13 131 5.38e-15 72.8
MS.gene71987.t1 MTR_8g102800 54.545 66 27 2 139 202 29 93 6.04e-15 72.8
MS.gene71987.t1 MTR_2g101340 55.172 58 25 1 145 202 41 97 7.06e-15 72.0
MS.gene71987.t1 MTR_4g035430 52.459 61 28 1 145 205 32 91 8.85e-15 72.0
MS.gene71987.t1 MTR_8g013860 54.839 62 27 1 145 206 47 107 1.05e-14 71.2
MS.gene71987.t1 MTR_7g046260 58.065 62 23 2 143 202 57 117 1.11e-14 72.0
MS.gene71987.t1 MTR_8g027465 53.226 62 28 1 145 206 39 99 1.20e-14 70.5
MS.gene71987.t1 MTR_7g011630 43.878 98 52 2 106 201 1 97 1.61e-14 73.2
MS.gene71987.t1 MTR_4g100650 58.621 58 23 1 145 202 74 130 1.88e-14 71.6
MS.gene71987.t1 MTR_7g085810 52.113 71 33 1 145 215 30 99 1.94e-14 71.6
MS.gene71987.t1 MTR_5g008540 55.357 56 24 1 147 202 26 80 2.32e-14 67.8
MS.gene71987.t1 MTR_3g102100 55.000 60 26 1 143 202 43 101 2.68e-14 69.3
MS.gene71987.t1 MTR_1g014820 43.210 81 43 2 122 202 6 83 2.78e-14 71.2
MS.gene71987.t1 MTR_1g014780 45.946 74 39 1 129 202 22 94 3.56e-14 70.5
MS.gene71987.t1 MTR_1g014860 51.613 62 29 1 141 202 18 78 4.14e-14 70.1
MS.gene71987.t1 MTR_2g043050 47.368 76 32 2 145 220 19 86 5.42e-14 69.7
MS.gene71987.t1 MTR_1g019110 55.000 60 26 1 143 202 42 100 7.25e-14 68.6
MS.gene71987.t1 MTR_1g074280 56.944 72 29 1 137 206 7 78 8.83e-14 66.6
MS.gene71987.t1 MTR_5g016750 49.296 71 34 2 143 213 23 91 9.69e-14 68.2
MS.gene71987.t1 MTR_1g014800 51.667 60 28 1 143 202 29 87 1.13e-13 68.9
MS.gene71987.t1 MTR_2g043030 47.368 76 32 2 145 220 19 86 1.65e-13 68.2
MS.gene71987.t1 MTR_1g097190 50.000 62 27 2 145 203 23 83 1.81e-13 66.6
MS.gene71987.t1 MTR_5g008470 51.613 62 29 1 141 202 71 131 2.02e-13 67.4
MS.gene71987.t1 MTR_1g074290 62.903 62 23 0 145 206 17 78 2.16e-13 66.6
MS.gene71987.t1 MTR_2g043040 38.614 101 54 2 145 245 19 111 2.74e-13 67.8
MS.gene71987.t1 MTR_6g012970 55.932 59 25 1 143 201 36 93 3.87e-13 68.9
MS.gene71987.t1 MTR_2g016730 53.125 64 28 2 141 203 18 80 4.66e-13 68.6
MS.gene71987.t1 MTR_8g032610 46.479 71 37 1 143 213 25 94 4.74e-13 68.2
MS.gene71987.t1 MTR_5g085125 45.946 74 39 1 136 209 7 79 1.21e-12 65.1
MS.gene71987.t1 MTR_2g085015 41.053 95 43 4 145 234 47 133 1.27e-12 65.9
MS.gene71987.t1 MTR_1g023170 59.420 69 24 2 134 202 32 96 1.93e-12 66.2
MS.gene71987.t1 MTR_3g107380 59.701 67 26 1 143 209 6 71 2.27e-12 65.1
MS.gene71987.t1 MTR_4g082345 54.098 61 27 1 143 203 46 105 2.66e-12 66.2
MS.gene71987.t1 MTR_8g023680 55.556 54 19 2 137 186 104 156 3.18e-12 66.2
MS.gene71987.t1 MTR_1g006660 53.247 77 32 3 142 216 42 116 3.50e-12 65.1
MS.gene71987.t1 MTR_6g088425 61.290 62 21 2 143 202 45 105 3.58e-12 64.7
MS.gene71987.t1 MTR_3g105510 43.902 82 35 3 143 214 35 115 4.15e-12 64.7
MS.gene71987.t1 MTR_1g110970 55.738 61 24 2 126 184 76 135 4.91e-12 65.5
MS.gene71987.t1 MTR_3g017420 54.902 51 22 1 152 202 2 51 5.26e-12 60.5
MS.gene71987.t1 MTR_1g101600 44.318 88 40 3 122 201 10 96 6.72e-12 63.5
MS.gene71987.t1 MTR_3g112440 54.430 79 30 2 145 223 39 111 9.06e-12 63.5
MS.gene71987.t1 MTR_5g057810 57.143 56 21 2 145 198 88 142 1.14e-11 64.3
MS.gene71987.t1 MTR_5g057647 57.143 56 21 2 145 198 88 142 1.14e-11 64.3
MS.gene71987.t1 MTR_8g023700 69.048 42 12 1 145 186 117 157 1.39e-11 64.3
MS.gene71987.t1 MTR_2g043020 44.737 76 34 2 145 220 19 86 1.43e-11 62.8
MS.gene71987.t1 MTR_5g008590 48.193 83 36 2 145 221 11 92 1.90e-11 62.0
MS.gene71987.t1 MTR_1g098460 75.926 54 12 1 152 205 146 198 1.90e-11 63.9
MS.gene71987.t1 MTR_6g465530 56.140 57 24 1 145 201 33 88 2.15e-11 62.0
MS.gene71987.t1 MTR_1g105400 49.180 61 28 2 128 186 96 155 2.22e-11 63.5
MS.gene71987.t1 MTR_6g465510 56.140 57 24 1 145 201 33 88 2.49e-11 62.0
MS.gene71987.t1 MTR_6g465690 54.386 57 25 1 145 201 63 118 3.29e-11 62.4
MS.gene71987.t1 MTR_6g037610 73.214 56 14 1 152 207 187 241 3.51e-11 63.2
MS.gene71987.t1 MTR_1g012470 57.812 64 26 1 140 203 2 64 3.53e-11 61.2
MS.gene71987.t1 MTR_6g466130 54.386 57 25 1 145 201 66 121 3.75e-11 62.0
MS.gene71987.t1 MTR_5g008550 37.302 126 59 4 145 251 21 145 5.55e-11 60.8
MS.gene71987.t1 MTR_6g465430 54.386 57 25 1 145 201 54 109 6.16e-11 61.6
MS.gene71987.t1 MTR_6g466000 54.386 57 25 1 145 201 57 112 6.55e-11 61.2
MS.gene71987.t1 MTR_6g465460 54.386 57 25 1 145 201 54 109 7.15e-11 61.6
MS.gene71987.t1 MTR_1g074270 58.333 48 19 1 160 206 22 69 9.97e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71987.t1 AT4G17500 53.287 289 91 7 1 267 1 267 4.65e-86 258
MS.gene71987.t1 AT5G47220 51.825 274 95 8 1 268 1 243 3.52e-75 229
MS.gene71987.t1 AT2G44840 46.522 230 95 4 38 266 12 214 1.05e-57 184
MS.gene71987.t1 AT5G47230 50.388 129 51 2 123 250 133 249 4.28e-31 117
MS.gene71987.t1 AT3G23240 42.857 140 43 2 62 201 36 138 3.14e-30 113
MS.gene71987.t1 AT5G51190 50.450 111 49 2 135 239 58 168 1.60e-29 111
MS.gene71987.t1 AT4G17490 65.789 76 26 0 135 210 127 202 1.74e-29 112
MS.gene71987.t1 AT5G61890 65.432 81 27 1 128 208 73 152 6.21e-29 110
MS.gene71987.t1 AT5G13330 61.176 85 32 1 122 206 16 99 2.66e-28 107
MS.gene71987.t1 AT5G07580 71.875 64 18 0 140 203 105 168 3.30e-28 107
MS.gene71987.t1 AT3G23230 74.194 62 16 0 141 202 16 77 1.47e-27 103
MS.gene71987.t1 AT5G43410 60.256 78 31 0 131 208 1 78 5.92e-27 102
MS.gene71987.t1 AT5G61600 66.667 63 21 0 143 205 86 148 3.50e-26 103
MS.gene71987.t1 AT2G33710 70.588 68 17 2 141 206 66 132 3.80e-26 102
MS.gene71987.t1 AT2G33710 70.588 68 17 2 141 206 66 132 4.55e-26 102
MS.gene71987.t1 AT2G31230 63.014 73 27 0 133 205 74 146 2.04e-25 101
MS.gene71987.t1 AT4G18450 46.491 114 48 4 140 250 105 208 7.71e-25 100
MS.gene71987.t1 AT3G61630 64.865 74 25 1 128 201 88 160 1.92e-24 100
MS.gene71987.t1 AT2G47520 72.414 58 15 1 145 202 50 106 4.62e-23 93.2
MS.gene71987.t1 AT2G20880 47.826 115 51 4 143 256 185 291 8.45e-23 95.9
MS.gene71987.t1 AT5G44210 52.000 100 33 3 144 243 32 116 2.96e-22 91.7
MS.gene71987.t1 AT3G16770 72.414 58 15 1 145 202 79 135 3.42e-22 92.8
MS.gene71987.t1 AT4G39780 63.014 73 22 2 134 202 78 149 3.42e-22 93.2
MS.gene71987.t1 AT1G22190 61.111 72 27 1 143 214 81 151 4.86e-22 92.4
MS.gene71987.t1 AT4G27950 54.878 82 33 2 133 214 106 183 7.07e-22 93.6
MS.gene71987.t1 AT1G36060 61.538 78 26 3 134 208 130 206 8.55e-22 92.8
MS.gene71987.t1 AT1G78080 47.414 116 43 4 143 241 150 264 9.45e-22 93.2
MS.gene71987.t1 AT5G61590 65.385 78 24 2 143 219 105 180 9.70e-22 90.5
MS.gene71987.t1 AT5G65130 65.672 67 22 1 143 209 111 176 1.03e-21 92.0
MS.gene71987.t1 AT5G65130 65.672 67 22 1 143 209 109 174 1.04e-21 92.0
MS.gene71987.t1 AT1G03800 68.333 60 18 1 144 203 52 110 1.84e-21 90.5
MS.gene71987.t1 AT2G22200 72.414 58 15 1 145 202 71 127 2.04e-21 90.9
MS.gene71987.t1 AT1G72360 68.966 58 17 1 145 202 25 81 3.58e-21 89.0
MS.gene71987.t1 AT3G15210 53.846 91 37 3 144 233 24 110 4.01e-21 89.4
MS.gene71987.t1 AT4G11140 66.667 60 19 1 143 202 85 143 4.95e-21 90.5
MS.gene71987.t1 AT1G28360 69.492 59 17 1 144 202 11 68 6.65e-21 87.8
MS.gene71987.t1 AT3G20310 60.563 71 27 1 140 210 22 91 7.09e-21 89.0
MS.gene71987.t1 AT1G72360 68.966 58 17 1 145 202 74 130 7.37e-21 89.4
MS.gene71987.t1 AT1G72360 68.966 58 17 1 145 202 76 132 7.47e-21 89.4
MS.gene71987.t1 AT3G23220 81.034 58 11 0 145 202 14 71 9.36e-21 85.9
MS.gene71987.t1 AT5G53290 67.213 61 19 1 143 203 123 182 9.97e-21 90.5
MS.gene71987.t1 AT4G28140 63.492 63 22 1 140 202 138 199 1.15e-20 89.4
MS.gene71987.t1 AT4G13620 71.667 60 16 1 143 202 230 288 1.65e-20 90.1
MS.gene71987.t1 AT2G46310 70.175 57 16 1 145 201 99 154 2.03e-20 89.0
MS.gene71987.t1 AT1G50640 65.625 64 21 1 140 203 23 85 3.49e-20 86.7
MS.gene71987.t1 AT5G13910 66.667 60 19 1 142 201 17 75 4.32e-20 86.3
MS.gene71987.t1 AT1G28370 53.659 82 31 2 122 203 3 77 6.01e-20 84.7
MS.gene71987.t1 AT1G28370 54.321 81 30 2 122 202 41 114 7.54e-20 85.5
MS.gene71987.t1 AT5G07310 72.727 66 17 1 140 205 87 151 9.23e-20 86.3
MS.gene71987.t1 AT4G23750 63.934 61 21 1 143 203 120 179 1.79e-19 87.0
MS.gene71987.t1 AT4G23750 63.934 61 21 1 143 203 120 179 1.79e-19 87.0
MS.gene71987.t1 AT1G04370 75.000 64 16 0 145 208 20 83 2.01e-19 82.4
MS.gene71987.t1 AT1G12980 44.248 113 58 3 111 222 26 134 2.97e-19 85.9
MS.gene71987.t1 AT1G06160 56.250 96 27 3 143 225 80 173 8.65e-19 83.6
MS.gene71987.t1 AT1G15360 58.824 68 27 1 140 207 2 68 1.93e-18 81.6
MS.gene71987.t1 AT1G15360 58.824 68 27 1 140 207 2 68 1.93e-18 81.6
MS.gene71987.t1 AT3G57600 54.667 75 25 2 136 202 11 84 2.90e-18 82.4
MS.gene71987.t1 AT1G75490 45.000 100 41 3 111 202 5 98 5.65e-18 80.5
MS.gene71987.t1 AT5G18560 64.912 57 19 1 145 201 55 110 6.14e-18 82.8
MS.gene71987.t1 AT1G43160 73.846 65 16 1 143 207 59 122 6.42e-18 79.7
MS.gene71987.t1 AT5G64750 54.651 86 32 3 152 231 192 276 8.57e-18 82.4
MS.gene71987.t1 AT3G11020 66.667 63 20 1 145 207 78 139 1.20e-17 81.6
MS.gene71987.t1 AT5G50080 69.118 68 20 1 135 202 76 142 2.29e-17 79.3
MS.gene71987.t1 AT5G50080 69.118 68 20 1 135 202 67 133 2.33e-17 79.0
MS.gene71987.t1 AT4G34410 81.356 59 10 1 145 203 136 193 2.44e-17 79.7
MS.gene71987.t1 AT1G24590 66.667 57 18 1 145 201 58 113 3.30e-17 80.1
MS.gene71987.t1 AT5G25390 50.000 84 40 2 140 223 2 83 4.27e-17 77.4
MS.gene71987.t1 AT1G22985 59.155 71 21 2 143 211 73 137 4.54e-17 76.6
MS.gene71987.t1 AT5G25190 58.462 65 26 1 143 207 6 69 6.43e-17 77.0
MS.gene71987.t1 AT1G28160 64.912 57 19 1 145 201 39 94 9.23e-17 77.8
MS.gene71987.t1 AT1G71450 60.345 58 22 1 145 202 24 80 1.08e-16 76.3
MS.gene71987.t1 AT2G40340 50.602 83 32 2 132 206 58 139 1.13e-16 79.0
MS.gene71987.t1 AT2G40340 50.602 83 32 2 132 206 51 132 1.28e-16 79.0
MS.gene71987.t1 AT2G40340 50.602 83 32 2 132 206 51 132 1.30e-16 78.2
MS.gene71987.t1 AT5G25390 48.810 84 38 2 140 223 2 80 2.00e-16 75.9
MS.gene71987.t1 AT5G25810 55.405 74 28 3 133 202 20 92 2.48e-16 76.3
MS.gene71987.t1 AT5G11590 51.899 79 34 3 142 218 46 122 5.42e-16 75.5
MS.gene71987.t1 AT2G40340 55.556 72 30 2 136 206 4 74 5.42e-16 76.3
MS.gene71987.t1 AT2G40340 55.556 72 30 2 136 206 4 74 5.42e-16 76.3
MS.gene71987.t1 AT2G40340 55.556 72 30 2 136 206 4 74 5.42e-16 76.3
MS.gene71987.t1 AT5G05410 63.793 58 20 1 145 202 79 135 6.10e-16 76.6
MS.gene71987.t1 AT5G05410 63.793 58 20 1 145 202 79 135 8.01e-16 76.6
MS.gene71987.t1 AT4G06746 49.333 75 35 2 130 202 19 92 8.41e-16 73.2
MS.gene71987.t1 AT2G25820 51.351 74 34 2 145 218 26 97 1.16e-15 74.3
MS.gene71987.t1 AT4G32800 58.621 58 23 1 145 202 19 75 1.18e-15 74.3
MS.gene71987.t1 AT4G31060 53.226 62 28 1 141 202 23 83 1.29e-15 73.6
MS.gene71987.t1 AT1G71130 53.247 77 28 2 143 213 77 151 1.52e-15 72.8
MS.gene71987.t1 AT1G12890 57.143 63 26 1 145 207 21 82 1.75e-15 73.9
MS.gene71987.t1 AT5G18450 52.941 68 28 2 134 201 26 89 2.14e-15 75.1
MS.gene71987.t1 AT2G40350 57.627 59 24 1 145 203 74 131 2.82e-15 72.0
MS.gene71987.t1 AT3G16280 60.345 58 22 1 145 202 61 117 3.39e-15 73.6
MS.gene71987.t1 AT2G35700 56.452 62 26 1 141 202 41 101 3.46e-15 72.4
MS.gene71987.t1 AT2G40350 57.627 59 24 1 145 203 67 124 3.61e-15 71.6
MS.gene71987.t1 AT3G16280 60.345 58 22 1 145 202 79 135 3.88e-15 73.6
MS.gene71987.t1 AT1G53910 50.442 113 49 4 99 207 78 187 7.05e-15 73.9
MS.gene71987.t1 AT2G44940 58.065 62 23 2 143 202 96 156 8.76e-15 73.2
MS.gene71987.t1 AT3G50260 37.607 117 53 4 145 261 21 117 8.98e-15 70.5
MS.gene71987.t1 AT4G36900 53.226 62 28 1 141 202 26 86 1.10e-14 71.2
MS.gene71987.t1 AT3G60490 56.897 58 24 1 145 202 71 127 1.89e-14 71.6
MS.gene71987.t1 AT1G53910 48.673 113 53 3 99 207 78 189 1.89e-14 72.8
MS.gene71987.t1 AT1G53910 48.673 113 53 3 99 207 78 189 1.89e-14 72.8
MS.gene71987.t1 AT2G23340 55.000 60 26 1 143 202 26 84 1.99e-14 70.1
MS.gene71987.t1 AT3G14230 41.497 147 74 4 102 243 80 219 3.86e-14 72.0
MS.gene71987.t1 AT1G01250 42.105 95 50 3 116 206 12 105 3.91e-14 69.7
MS.gene71987.t1 AT3G14230 52.000 100 41 3 144 243 123 215 5.45e-14 71.6
MS.gene71987.t1 AT4G16750 54.839 62 27 1 141 202 36 96 5.68e-14 68.9
MS.gene71987.t1 AT1G46768 55.000 60 26 1 143 202 29 87 5.84e-14 68.2
MS.gene71987.t1 AT1G46768 55.000 60 26 1 143 202 29 87 5.84e-14 68.2
MS.gene71987.t1 AT3G14230 52.000 100 41 3 144 243 122 214 5.85e-14 71.2
MS.gene71987.t1 AT5G67190 55.172 58 25 1 145 202 21 77 6.76e-14 68.6
MS.gene71987.t1 AT1G46768 55.000 60 26 1 143 202 29 87 7.31e-14 67.8
MS.gene71987.t1 AT5G19790 50.649 77 34 2 125 201 5 77 7.67e-14 69.7
MS.gene71987.t1 AT2G36450 56.522 69 26 3 142 207 10 77 1.42e-13 67.8
MS.gene71987.t1 AT4G25490 59.649 57 22 1 145 201 48 103 2.15e-13 67.8
MS.gene71987.t1 AT4G25470 59.649 57 22 1 145 201 51 106 2.29e-13 67.8
MS.gene71987.t1 AT1G53170 63.492 63 22 1 145 207 31 92 6.72e-13 65.9
MS.gene71987.t1 AT4G25480 57.895 57 23 1 145 201 51 106 8.75e-13 66.2
MS.gene71987.t1 AT1G19210 51.724 58 27 1 145 202 12 68 1.02e-12 65.5
MS.gene71987.t1 AT5G21960 55.172 58 25 1 145 202 7 63 1.39e-12 65.9
MS.gene71987.t1 AT1G21910 51.724 58 27 1 145 202 50 106 2.68e-12 65.1
MS.gene71987.t1 AT5G51990 57.895 57 23 1 145 201 54 109 2.93e-12 65.1
MS.gene71987.t1 AT2G38340 48.454 97 35 3 127 208 44 140 3.54e-12 65.1
MS.gene71987.t1 AT1G74930 50.000 58 28 1 145 202 21 77 3.55e-12 64.3
MS.gene71987.t1 AT1G22810 38.462 104 58 3 145 246 14 113 5.15e-12 62.8
MS.gene71987.t1 AT5G67000 35.556 135 71 5 68 200 55 175 2.24e-11 61.6
MS.gene71987.t1 AT5G11190 57.812 64 26 1 140 203 2 64 2.48e-11 61.6
MS.gene71987.t1 AT1G77200 58.621 58 23 1 145 202 43 99 4.29e-11 62.0
MS.gene71987.t1 AT1G49120 34.286 105 64 2 145 249 87 186 8.96e-11 61.6

Find 93 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTCACCGGAGCAGCTTT+TGG 0.272014 8.1:-22681630 None:intergenic
CGGTGCTCCAACAAATGTTT+CGG 0.316905 8.1:+22681314 MS.gene71987:CDS
GGCGGCGAATAGAGTCTAAA+AGG 0.317517 8.1:-22681263 None:intergenic
GGTGCTCCAACAAATGTTTC+GGG 0.321872 8.1:+22681315 MS.gene71987:CDS
AACCGCTGAGGATGCGGCTT+TGG 0.324562 8.1:+22681755 MS.gene71987:CDS
TCTATTCGCCGCCACTTGTT+AGG 0.348893 8.1:+22681273 MS.gene71987:CDS
TCTGAAGATATGGTACTTTA+CGG 0.355225 8.1:+22681432 MS.gene71987:CDS
ACCCATGTTTAAGTGACAAT+TGG 0.355880 8.1:+22681382 MS.gene71987:CDS
CGGAACCCACCCAACATTTA+CGG 0.370150 8.1:-22681469 None:intergenic
TGGGTATAAACTGCTGAAAC+TGG 0.370999 8.1:-22681364 None:intergenic
CACACGTGGAGGACAGTTAC+TGG 0.372887 8.1:+22682004 MS.gene71987:CDS
GGAGAATCCGAATTTATATT+CGG 0.374846 8.1:+22681294 MS.gene71987:CDS
CGGCGTGAGACAACGGCCTT+GGG 0.378249 8.1:+22681665 MS.gene71987:CDS
CCCATGTTTAAGTGACAATT+GGG 0.395679 8.1:+22681383 MS.gene71987:CDS
GTTAGAAATGACGGTGAAAC+CGG 0.397441 8.1:+22681536 MS.gene71987:CDS
TGGGTTCCGTCTCTTGAAGT+TGG 0.401126 8.1:+22681483 MS.gene71987:CDS
AAAACCGATGAGACACTTTC+GGG 0.401330 8.1:-22681510 None:intergenic
AGAAGATGATTCTGAAGATA+TGG 0.403547 8.1:+22681422 MS.gene71987:CDS
TGGAGCACCGAATATAAATT+CGG 0.409017 8.1:-22681301 None:intergenic
CGAAGAACGGAGCTAGGGTT+TGG 0.413192 8.1:+22681718 MS.gene71987:CDS
GTATTACCCGAAACATTTGT+TGG 0.425227 8.1:-22681321 None:intergenic
TCTAACCGGGTCGGGTTCGC+CGG 0.426007 8.1:-22681847 None:intergenic
GAAGCTATTCTAACCGGGTC+GGG 0.426817 8.1:-22681855 None:intergenic
GCGGCGTGAGACAACGGCCT+TGG 0.441026 8.1:+22681664 MS.gene71987:CDS
CTTCGCGACGCCGTAAATGT+TGG 0.442144 8.1:+22681459 MS.gene71987:CDS
GGGTTCCGTCTCTTGAAGTT+GGG 0.457764 8.1:+22681484 MS.gene71987:CDS
TTCGCGACGCCGTAAATGTT+GGG 0.457801 8.1:+22681460 MS.gene71987:CDS
TGGAGCTCCGAGAGAAAACC+CGG 0.459822 8.1:-22681344 None:intergenic
ACCGGAACGTTCTTCTTCAT+CGG 0.469012 8.1:+22681890 MS.gene71987:CDS
CGCGGCGGAGATTCGTGATC+CGG 0.474200 8.1:+22681695 MS.gene71987:CDS
TCCGATGAAGAAGAACGTTC+CGG 0.485275 8.1:-22681891 None:intergenic
CAAATGTTTCGGGTAATACC+CGG 0.491537 8.1:+22681325 MS.gene71987:CDS
TTCTCCACCGGCATAACATC+CGG 0.492162 8.1:-22681561 None:intergenic
AACGGAGCTAGGGTTTGGCT+TGG 0.497062 8.1:+22681723 MS.gene71987:CDS
CCCCAATTGTCACTTAAACA+TGG 0.498682 8.1:-22681384 None:intergenic
GGCTTCTACGGCGGAGCAAG+TGG 0.500398 8.1:+22681596 MS.gene71987:CDS
TGTCCTACCGGTGGCTTCTA+CGG 0.500889 8.1:+22681584 MS.gene71987:CDS
ATTTGAAACCGCTGAGGATG+CGG 0.501236 8.1:+22681749 MS.gene71987:CDS
AGAGTCTAAAAGGGCAAGAT+CGG 0.504431 8.1:-22681253 None:intergenic
AGCTTCAAAACGTTCTTCAC+CGG 0.506489 8.1:+22681872 MS.gene71987:CDS
ACCGGAGCCGGATGTTATGC+CGG 0.509833 8.1:+22681554 MS.gene71987:CDS
TTCATCGGAAAGTAGTTCTC+CGG 0.510566 8.1:+22681905 MS.gene71987:CDS
CCAAAAGCTGCTCCGGTGAA+AGG 0.513655 8.1:+22681630 MS.gene71987:CDS
TGAAGCTATTCTAACCGGGT+CGG 0.513880 8.1:-22681856 None:intergenic
AGAGGGACCAAAAGCTGCTC+CGG 0.514715 8.1:+22681623 MS.gene71987:CDS
CTTATGATAGAGCTGCGTAT+AGG 0.515879 8.1:+22681778 MS.gene71987:CDS
GTTACTTTCTTTCTCTTCGC+CGG 0.518595 8.1:-22681924 None:intergenic
ACCGGCATAACATCCGGCTC+CGG 0.525114 8.1:-22681555 None:intergenic
ACCCTAGCTCCGTTCTTCGC+CGG 0.527888 8.1:-22681714 None:intergenic
ATCCGGCGAAGAACGGAGCT+AGG 0.529916 8.1:+22681712 MS.gene71987:CDS
CCCAATTGTCACTTAAACAT+GGG 0.539909 8.1:-22681383 None:intergenic
CCTACCGGTGGCTTCTACGG+CGG 0.539965 8.1:+22681587 MS.gene71987:CDS
TAACTCCGGCGAACCCGACC+CGG 0.545429 8.1:+22681842 MS.gene71987:CDS
AATGACGGTGAAACCGGAGC+CGG 0.545739 8.1:+22681542 MS.gene71987:CDS
ACCAAAGGCCACAACATGTA+CGG 0.547777 8.1:+22681213 None:intergenic
GCGACGCCGTAAATGTTGGG+TGG 0.551388 8.1:+22681463 MS.gene71987:CDS
CGACGCCGTAAATGTTGGGT+GGG 0.562372 8.1:+22681464 MS.gene71987:CDS
ATTCGTGATCCGGCGAAGAA+CGG 0.563210 8.1:+22681705 MS.gene71987:CDS
GCCGGTGGAGAATGTCCTAC+CGG 0.570540 8.1:+22681572 MS.gene71987:CDS
TTTCCACTTCGGGTTAACTC+CGG 0.571329 8.1:+22681828 MS.gene71987:CDS
GTCACCCGAAAGTGTCTCAT+CGG 0.573926 8.1:+22681506 MS.gene71987:CDS
AAATGTTTCGGGTAATACCC+GGG 0.585648 8.1:+22681326 MS.gene71987:CDS
TCAGAATCATCTTCTTTGAG+TGG 0.586437 8.1:-22681414 None:intergenic
GGTTTCACCGTCATTTCTAA+CGG 0.587508 8.1:-22681534 None:intergenic
TCGCCGGAGTTAACCCGAAG+TGG 0.596624 8.1:-22681831 None:intergenic
GCGGCGAATAGAGTCTAAAA+GGG 0.598260 8.1:-22681262 None:intergenic
ACCGGTAGGACATTCTCCAC+CGG 0.602856 8.1:-22681573 None:intergenic
AGAGCTGCGTATAGGATGAG+AGG 0.604836 8.1:+22681786 MS.gene71987:CDS
ACTACCGCGGCGTGAGACAA+CGG 0.609780 8.1:+22681658 MS.gene71987:CDS
TCCGGCGAAGAACGGAGCTA+GGG 0.610982 8.1:+22681713 MS.gene71987:CDS
TGCTCCGCCGTAGAAGCCAC+CGG 0.616358 8.1:-22681591 None:intergenic
CAACATTTACGGCGTCGCGA+AGG 0.618314 8.1:-22681458 None:intergenic
AGGACAAGTGGGAAGTCAAG+TGG 0.630771 8.1:+22681971 MS.gene71987:CDS
GCGGAGCAAGTGGTTCCAGA+GGG 0.635382 8.1:+22681606 MS.gene71987:CDS
GGCGGAGCAAGTGGTTCCAG+AGG 0.637613 8.1:+22681605 MS.gene71987:CDS
GGTGACCCAACTTCAAGAGA+CGG 0.645113 8.1:-22681489 None:intergenic
CGGATTCTCCTAACAAGTGG+CGG 0.646031 8.1:-22681281 None:intergenic
ATTCGGATTCTCCTAACAAG+TGG 0.648497 8.1:-22681284 None:intergenic
GGTGGAGAATGTCCTACCGG+TGG 0.649479 8.1:+22681575 MS.gene71987:CDS
GTGGCACAACAATGCACACG+TGG 0.651208 8.1:+22681990 MS.gene71987:CDS
GCGTGAGACAACGGCCTTGG+GGG 0.652123 8.1:+22681667 MS.gene71987:CDS
GAGCTGCGTATAGGATGAGA+GGG 0.654210 8.1:+22681787 MS.gene71987:CDS
GGAGCCGGATGTTATGCCGG+TGG 0.660925 8.1:+22681557 MS.gene71987:CDS
CCGCCGTAGAAGCCACCGGT+AGG 0.661007 8.1:-22681587 None:intergenic
GCACAACAATGCACACGTGG+AGG 0.666908 8.1:+22681993 MS.gene71987:CDS
AGCCAAAGCCGCATCCTCAG+CGG 0.672158 8.1:-22681757 None:intergenic
GGCGTGAGACAACGGCCTTG+GGG 0.678751 8.1:+22681666 MS.gene71987:CDS
AAGGCCGTTGTCTCACGCCG+CGG 0.683089 8.1:-22681662 None:intergenic
CCATGTTTAAGTGACAATTG+GGG 0.685913 8.1:+22681384 MS.gene71987:CDS
AAAGTAACGACAGCTCAGAG+TGG 0.688687 8.1:+22681939 MS.gene71987:CDS
TGGAACATTTGAAACCGCTG+AGG 0.706082 8.1:+22681743 MS.gene71987:CDS
GTGAAAGGAAAACACTACCG+CGG 0.735755 8.1:+22681645 MS.gene71987:CDS
GGAGCTCCGAGAGAAAACCC+GGG 0.762071 8.1:-22681343 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
GGAGAATCCGAATTTATATT+CGG + chr8.1:22681294-22681313 MS.gene71987:CDS 30.0%
TCTGAAGATATGGTACTTTA+CGG + chr8.1:22681432-22681451 MS.gene71987:CDS 30.0%
! AGAAGATGATTCTGAAGATA+TGG + chr8.1:22681422-22681441 MS.gene71987:CDS 30.0%
! CTTTGTTGAATTTTCCACTT+CGG + chr8.1:22681817-22681836 MS.gene71987:CDS 30.0%
! TTTGTTGAATTTTCCACTTC+GGG + chr8.1:22681818-22681837 MS.gene71987:CDS 30.0%
AAAAACCGATGAGACACTTT+CGG - chr8.1:22681514-22681533 None:intergenic 35.0%
ACCCATGTTTAAGTGACAAT+TGG + chr8.1:22681382-22681401 MS.gene71987:CDS 35.0%
CCATGTTTAAGTGACAATTG+GGG + chr8.1:22681384-22681403 MS.gene71987:CDS 35.0%
CCCATGTTTAAGTGACAATT+GGG + chr8.1:22681383-22681402 MS.gene71987:CDS 35.0%
GGATTAAAAACAGGACAAGT+GGG + chr8.1:22681960-22681979 MS.gene71987:CDS 35.0%
GTATTACCCGAAACATTTGT+TGG - chr8.1:22681324-22681343 None:intergenic 35.0%
TCAGAATCATCTTCTTTGAG+TGG - chr8.1:22681417-22681436 None:intergenic 35.0%
TGGATTAAAAACAGGACAAG+TGG + chr8.1:22681959-22681978 MS.gene71987:CDS 35.0%
! CCCAATTGTCACTTAAACAT+GGG - chr8.1:22681386-22681405 None:intergenic 35.0%
! GGTTTTTCCGTTAGAAATGA+CGG + chr8.1:22681527-22681546 MS.gene71987:CDS 35.0%
!! TGGAGCACCGAATATAAATT+CGG - chr8.1:22681304-22681323 None:intergenic 35.0%
!!! CGTTTTGAAGCTATTCTAAC+CGG - chr8.1:22681864-22681883 None:intergenic 35.0%
!!! GTTTTGAAGCTATTCTAACC+GGG - chr8.1:22681863-22681882 None:intergenic 35.0%
AAAACCGATGAGACACTTTC+GGG - chr8.1:22681513-22681532 None:intergenic 40.0%
AGAGTCTAAAAGGGCAAGAT+CGG - chr8.1:22681256-22681275 None:intergenic 40.0%
AGCTTCAAAACGTTCTTCAC+CGG + chr8.1:22681872-22681891 MS.gene71987:CDS 40.0%
ATTCGGATTCTCCTAACAAG+TGG - chr8.1:22681287-22681306 None:intergenic 40.0%
CTTATGATAGAGCTGCGTAT+AGG + chr8.1:22681778-22681797 MS.gene71987:CDS 40.0%
GGTTTCACCGTCATTTCTAA+CGG - chr8.1:22681537-22681556 None:intergenic 40.0%
GTTAGAAATGACGGTGAAAC+CGG + chr8.1:22681536-22681555 MS.gene71987:CDS 40.0%
TGGGTATAAACTGCTGAAAC+TGG - chr8.1:22681367-22681386 None:intergenic 40.0%
TTCATCGGAAAGTAGTTCTC+CGG + chr8.1:22681905-22681924 MS.gene71987:CDS 40.0%
! AAATGTTTCGGGTAATACCC+GGG + chr8.1:22681326-22681345 MS.gene71987:CDS 40.0%
! CAAATGTTTCGGGTAATACC+CGG + chr8.1:22681325-22681344 MS.gene71987:CDS 40.0%
! CCCCAATTGTCACTTAAACA+TGG - chr8.1:22681387-22681406 None:intergenic 40.0%
! GTTACTTTCTTTCTCTTCGC+CGG - chr8.1:22681927-22681946 None:intergenic 40.0%
!! GCTCAGAGTGGATTAAAAAC+AGG + chr8.1:22681951-22681970 MS.gene71987:CDS 40.0%
AAAGTAACGACAGCTCAGAG+TGG + chr8.1:22681939-22681958 MS.gene71987:CDS 45.0%
ACCGGAACGTTCTTCTTCAT+CGG + chr8.1:22681890-22681909 MS.gene71987:CDS 45.0%
CGGTGCTCCAACAAATGTTT+CGG + chr8.1:22681314-22681333 MS.gene71987:CDS 45.0%
GCGGCGAATAGAGTCTAAAA+GGG - chr8.1:22681265-22681284 None:intergenic 45.0%
GGTGCTCCAACAAATGTTTC+GGG + chr8.1:22681315-22681334 MS.gene71987:CDS 45.0%
GTGAAAGGAAAACACTACCG+CGG + chr8.1:22681645-22681664 MS.gene71987:CDS 45.0%
TCCGATGAAGAAGAACGTTC+CGG - chr8.1:22681894-22681913 None:intergenic 45.0%
TGAAGCTATTCTAACCGGGT+CGG - chr8.1:22681859-22681878 None:intergenic 45.0%
! ATTTGAAACCGCTGAGGATG+CGG + chr8.1:22681749-22681768 MS.gene71987:CDS 45.0%
! CGGTAGTGTTTTCCTTTCAC+CGG - chr8.1:22681645-22681664 None:intergenic 45.0%
! GTAATACCCGGGTTTTCTCT+CGG + chr8.1:22681337-22681356 MS.gene71987:CDS 45.0%
! TGGAACATTTGAAACCGCTG+AGG + chr8.1:22681743-22681762 MS.gene71987:CDS 45.0%
! TTTCCACTTCGGGTTAACTC+CGG + chr8.1:22681828-22681847 MS.gene71987:CDS 45.0%
AGAGCTGCGTATAGGATGAG+AGG + chr8.1:22681786-22681805 MS.gene71987:CDS 50.0%
AGGACAAGTGGGAAGTCAAG+TGG + chr8.1:22681971-22681990 MS.gene71987:CDS 50.0%
ATTCGTGATCCGGCGAAGAA+CGG + chr8.1:22681705-22681724 MS.gene71987:CDS 50.0%
CGGAACCCACCCAACATTTA+CGG - chr8.1:22681472-22681491 None:intergenic 50.0%
CGGATTCTCCTAACAAGTGG+CGG - chr8.1:22681284-22681303 None:intergenic 50.0%
GAAGCTATTCTAACCGGGTC+GGG - chr8.1:22681858-22681877 None:intergenic 50.0%
GAGCTGCGTATAGGATGAGA+GGG + chr8.1:22681787-22681806 MS.gene71987:CDS 50.0%
GGCGGCGAATAGAGTCTAAA+AGG - chr8.1:22681266-22681285 None:intergenic 50.0%
GGGTTCCGTCTCTTGAAGTT+GGG + chr8.1:22681484-22681503 MS.gene71987:CDS 50.0%
GGTGACCCAACTTCAAGAGA+CGG - chr8.1:22681492-22681511 None:intergenic 50.0%
TCTATTCGCCGCCACTTGTT+AGG + chr8.1:22681273-22681292 MS.gene71987:CDS 50.0%
TGGGTTCCGTCTCTTGAAGT+TGG + chr8.1:22681483-22681502 MS.gene71987:CDS 50.0%
TTCGCGACGCCGTAAATGTT+GGG + chr8.1:22681460-22681479 MS.gene71987:CDS 50.0%
TTCTCCACCGGCATAACATC+CGG - chr8.1:22681564-22681583 None:intergenic 50.0%
!! GTCACCCGAAAGTGTCTCAT+CGG + chr8.1:22681506-22681525 MS.gene71987:CDS 50.0%
AACGGAGCTAGGGTTTGGCT+TGG + chr8.1:22681723-22681742 MS.gene71987:CDS 55.0%
AATGACGGTGAAACCGGAGC+CGG + chr8.1:22681542-22681561 MS.gene71987:CDS 55.0%
ACCGGTAGGACATTCTCCAC+CGG - chr8.1:22681576-22681595 None:intergenic 55.0%
AGAGGGACCAAAAGCTGCTC+CGG + chr8.1:22681623-22681642 MS.gene71987:CDS 55.0%
CAACATTTACGGCGTCGCGA+AGG - chr8.1:22681461-22681480 None:intergenic 55.0%
CACACGTGGAGGACAGTTAC+TGG + chr8.1:22682004-22682023 MS.gene71987:CDS 55.0%
CCAAAAGCTGCTCCGGTGAA+AGG + chr8.1:22681630-22681649 MS.gene71987:CDS 55.0%
CGAAGAACGGAGCTAGGGTT+TGG + chr8.1:22681718-22681737 MS.gene71987:CDS 55.0%
CGACGCCGTAAATGTTGGGT+GGG + chr8.1:22681464-22681483 MS.gene71987:CDS 55.0%
CTTCGCGACGCCGTAAATGT+TGG + chr8.1:22681459-22681478 MS.gene71987:CDS 55.0%
GCACAACAATGCACACGTGG+AGG + chr8.1:22681993-22682012 MS.gene71987:CDS 55.0%
GTGGCACAACAATGCACACG+TGG + chr8.1:22681990-22682009 MS.gene71987:CDS 55.0%
TGGAGCTCCGAGAGAAAACC+CGG - chr8.1:22681347-22681366 None:intergenic 55.0%
TGTCCTACCGGTGGCTTCTA+CGG + chr8.1:22681584-22681603 MS.gene71987:CDS 55.0%
! CCTTTCACCGGAGCAGCTTT+TGG - chr8.1:22681633-22681652 None:intergenic 55.0%
AACCGCTGAGGATGCGGCTT+TGG + chr8.1:22681755-22681774 MS.gene71987:CDS 60.0%
ACCCTAGCTCCGTTCTTCGC+CGG - chr8.1:22681717-22681736 None:intergenic 60.0%
ACCGGAGCCGGATGTTATGC+CGG + chr8.1:22681554-22681573 MS.gene71987:CDS 60.0%
ACCGGCATAACATCCGGCTC+CGG - chr8.1:22681558-22681577 None:intergenic 60.0%
ACGGCCTTGGGGGAAATTCG+CGG + chr8.1:22681677-22681696 MS.gene71987:CDS 60.0%
ACTACCGCGGCGTGAGACAA+CGG + chr8.1:22681658-22681677 MS.gene71987:CDS 60.0%
AGCCAAAGCCGCATCCTCAG+CGG - chr8.1:22681760-22681779 None:intergenic 60.0%
ATCCGGCGAAGAACGGAGCT+AGG + chr8.1:22681712-22681731 MS.gene71987:CDS 60.0%
GCCGGTGGAGAATGTCCTAC+CGG + chr8.1:22681572-22681591 MS.gene71987:CDS 60.0%
GCGACGCCGTAAATGTTGGG+TGG + chr8.1:22681463-22681482 MS.gene71987:CDS 60.0%
GCGGAGCAAGTGGTTCCAGA+GGG + chr8.1:22681606-22681625 MS.gene71987:CDS 60.0%
GGAGCTCCGAGAGAAAACCC+GGG - chr8.1:22681346-22681365 None:intergenic 60.0%
GGTGGAGAATGTCCTACCGG+TGG + chr8.1:22681575-22681594 MS.gene71987:CDS 60.0%
TCCGGCGAAGAACGGAGCTA+GGG + chr8.1:22681713-22681732 MS.gene71987:CDS 60.0%
TCGCCGGAGTTAACCCGAAG+TGG - chr8.1:22681834-22681853 None:intergenic 60.0%
! GGAGCAGCTTTTGGTCCCTC+TGG - chr8.1:22681624-22681643 None:intergenic 60.0%
AAGGCCGTTGTCTCACGCCG+CGG - chr8.1:22681665-22681684 None:intergenic 65.0%
CCTACCGGTGGCTTCTACGG+CGG + chr8.1:22681587-22681606 MS.gene71987:CDS 65.0%
CGCGGCGGAGATTCGTGATC+CGG + chr8.1:22681695-22681714 MS.gene71987:CDS 65.0%
CGGCGTGAGACAACGGCCTT+GGG + chr8.1:22681665-22681684 MS.gene71987:CDS 65.0%
GCCTTGGGGGAAATTCGCGG+CGG + chr8.1:22681680-22681699 MS.gene71987:CDS 65.0%
GCGTGAGACAACGGCCTTGG+GGG + chr8.1:22681667-22681686 MS.gene71987:CDS 65.0%
GGAGCCGGATGTTATGCCGG+TGG + chr8.1:22681557-22681576 MS.gene71987:CDS 65.0%
GGCGGAGCAAGTGGTTCCAG+AGG + chr8.1:22681605-22681624 MS.gene71987:CDS 65.0%
GGCGTGAGACAACGGCCTTG+GGG + chr8.1:22681666-22681685 MS.gene71987:CDS 65.0%
GGCTTCTACGGCGGAGCAAG+TGG + chr8.1:22681596-22681615 MS.gene71987:CDS 65.0%
TAACTCCGGCGAACCCGACC+CGG + chr8.1:22681842-22681861 MS.gene71987:CDS 65.0%
TCCGCCGCGAATTTCCCCCA+AGG - chr8.1:22681684-22681703 None:intergenic 65.0%
TCTAACCGGGTCGGGTTCGC+CGG - chr8.1:22681850-22681869 None:intergenic 65.0%
TGCTCCGCCGTAGAAGCCAC+CGG - chr8.1:22681594-22681613 None:intergenic 65.0%
CCGCCGTAGAAGCCACCGGT+AGG - chr8.1:22681590-22681609 None:intergenic 70.0%
GCGGCGTGAGACAACGGCCT+TGG + chr8.1:22681664-22681683 MS.gene71987:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 22681228 22682034 22681228 ID=MS.gene71987
chr8.1 mRNA 22681228 22682034 22681228 ID=MS.gene71987.t1;Parent=MS.gene71987
chr8.1 exon 22681228 22682034 22681228 ID=MS.gene71987.t1.exon1;Parent=MS.gene71987.t1
chr8.1 CDS 22681228 22682034 22681228 ID=cds.MS.gene71987.t1;Parent=MS.gene71987.t1
Gene Sequence

>MS.gene71987

ATGTACGGAAATAGTAATTTTGATTCCGATCTTGCCCTTTTAGACTCTATTCGCCGCCACTTGTTAGGAGAATCCGAATTTATATTCGGTGCTCCAACAAATGTTTCGGGTAATACCCGGGTTTTCTCTCGGAGCTCCAGTTTCAGCAGTTTATACCCATGTTTAAGTGACAATTGGGGTGAACTACCACTCAAAGAAGATGATTCTGAAGATATGGTACTTTACGGCGTCCTTCGCGACGCCGTAAATGTTGGGTGGGTTCCGTCTCTTGAAGTTGGGTCACCCGAAAGTGTCTCATCGGTTTTTCCGTTAGAAATGACGGTGAAACCGGAGCCGGATGTTATGCCGGTGGAGAATGTCCTACCGGTGGCTTCTACGGCGGAGCAAGTGGTTCCAGAGGGACCAAAAGCTGCTCCGGTGAAAGGAAAACACTACCGCGGCGTGAGACAACGGCCTTGGGGGAAATTCGCGGCGGAGATTCGTGATCCGGCGAAGAACGGAGCTAGGGTTTGGCTTGGAACATTTGAAACCGCTGAGGATGCGGCTTTGGCTTATGATAGAGCTGCGTATAGGATGAGAGGGTCAAGAGCTTTGTTGAATTTTCCACTTCGGGTTAACTCCGGCGAACCCGACCCGGTTAGAATAGCTTCAAAACGTTCTTCACCGGAACGTTCTTCTTCATCGGAAAGTAGTTCTCCGGCGAAGAGAAAGAAAGTAACGACAGCTCAGAGTGGATTAAAAACAGGACAAGTGGGAAGTCAAGTGGCACAACAATGCACACGTGGAGGACAGTTACTGGTCTCTTAA
Protein sequence

>MS.gene71987.t1

MYGNSNFDSDLALLDSIRRHLLGESEFIFGAPTNVSGNTRVFSRSSSFSSLYPCLSDNWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLEVGSPESVSSVFPLEMTVKPEPDVMPVENVLPVASTAEQVVPEGPKAAPVKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRIASKRSSPERSSSSESSSPAKRKKVTTAQSGLKTGQVGSQVAQQCTRGGQLLVS