AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72248


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72248.t1 MTR_6g488280 95.395 304 14 0 1 304 1 304 0.0 598
MS.gene72248.t1 MTR_6g488280 85.294 68 10 0 305 372 398 465 6.74e-29 117
MS.gene72248.t1 MTR_0428s0010 95.395 304 14 0 1 304 1 304 0.0 598
MS.gene72248.t1 MTR_0428s0010 85.294 68 10 0 305 372 398 465 6.74e-29 117
MS.gene72248.t1 MTR_6g023665 89.474 304 32 0 1 304 8 311 0.0 563
MS.gene72248.t1 MTR_6g023665 89.706 68 7 0 305 372 405 472 3.20e-31 124
MS.gene72248.t1 MTR_8g006710 68.889 315 93 3 1 312 1 313 1.59e-152 438
MS.gene72248.t1 MTR_8g006710 64.706 68 24 0 305 372 399 466 1.32e-20 93.2
MS.gene72248.t1 MTR_8g006730 70.779 308 84 4 1 304 1 306 4.78e-152 437
MS.gene72248.t1 MTR_8g006730 72.727 66 18 0 305 370 400 465 1.45e-22 99.0
MS.gene72248.t1 MTR_8g465670 56.721 305 127 3 2 304 3 304 3.03e-118 351
MS.gene72248.t1 MTR_8g465670 50.000 72 32 1 305 372 400 471 6.97e-14 73.2
MS.gene72248.t1 MTR_8g006220 56.863 306 127 3 1 304 1 303 1.40e-117 350
MS.gene72248.t1 MTR_8g006220 49.315 73 32 2 305 372 407 479 1.23e-11 66.2
MS.gene72248.t1 MTR_0184s0040 43.750 320 172 6 1 315 16 332 2.57e-80 254
MS.gene72248.t1 MTR_0078s0190 43.750 320 172 6 1 315 16 332 2.57e-80 254
MS.gene72248.t1 MTR_8g008990 45.130 308 162 5 1 304 1 305 6.57e-80 253
MS.gene72248.t1 MTR_8g008990 47.059 68 35 1 305 372 403 469 3.49e-12 67.8
MS.gene72248.t1 MTR_0078s0200 43.730 311 164 6 1 304 1 307 1.50e-79 246
MS.gene72248.t1 MTR_8g009073 43.987 316 170 5 1 312 1 313 1.53e-79 251
MS.gene72248.t1 MTR_8g009055 44.805 308 163 5 1 304 1 305 2.83e-79 251
MS.gene72248.t1 MTR_7g047030 42.902 317 173 6 1 312 1 314 8.61e-79 249
MS.gene72248.t1 MTR_7g047270 42.902 317 173 6 1 312 1 314 8.61e-79 249
MS.gene72248.t1 MTR_0078s0010 43.689 309 166 6 1 304 1 306 3.32e-78 248
MS.gene72248.t1 MTR_0184s0030 43.730 311 164 6 1 304 1 307 7.81e-78 247
MS.gene72248.t1 MTR_8g009050 44.481 308 164 6 1 304 1 305 2.28e-77 246
MS.gene72248.t1 MTR_7g046490 42.308 364 196 7 1 360 1 354 2.87e-77 246
MS.gene72248.t1 MTR_8g009067 44.620 316 168 5 1 312 1 313 4.75e-77 245
MS.gene72248.t1 MTR_8g009063 45.098 306 161 5 1 302 8 310 5.33e-77 245
MS.gene72248.t1 MTR_1g019510 42.357 314 176 4 1 312 1 311 1.18e-76 244
MS.gene72248.t1 MTR_1g019510 47.059 68 35 1 305 372 398 464 1.53e-11 65.9
MS.gene72248.t1 MTR_0078s0060 44.805 308 163 6 1 304 1 305 2.10e-76 243
MS.gene72248.t1 MTR_8g008970 44.304 316 169 5 1 312 1 313 8.82e-74 244
MS.gene72248.t1 MTR_8g008970 47.573 103 50 2 191 289 527 629 3.81e-18 86.7
MS.gene72248.t1 MTR_8g027885 42.667 300 163 7 7 304 19 311 8.06e-73 234
MS.gene72248.t1 MTR_7g117170 43.648 307 156 6 7 304 16 314 8.27e-73 234
MS.gene72248.t1 MTR_8g027870 41.806 299 167 6 7 304 19 311 1.69e-70 228
MS.gene72248.t1 MTR_8g077590 43.092 304 162 6 7 304 10 308 1.25e-68 223
MS.gene72248.t1 MTR_8g006270 40.566 318 175 8 1 312 1 310 4.96e-65 214
MS.gene72248.t1 MTR_6g005600 39.610 308 179 5 1 304 1 305 1.75e-64 213
MS.gene72248.t1 MTR_8g006260 39.557 316 173 10 1 304 1 310 3.99e-59 199
MS.gene72248.t1 MTR_8g006260 55.738 61 27 0 312 372 410 470 2.85e-12 68.2
MS.gene72248.t1 MTR_8g012745 40.705 312 173 6 1 304 1 308 6.17e-58 196
MS.gene72248.t1 MTR_8g012650 39.688 320 181 6 1 312 1 316 1.57e-57 194
MS.gene72248.t1 MTR_8g012635 39.062 320 183 6 1 312 1 316 1.47e-56 192
MS.gene72248.t1 MTR_3g009510 31.611 329 206 8 4 316 3 328 6.06e-48 169
MS.gene72248.t1 MTR_8g006230 44.279 201 102 6 109 304 52 247 5.66e-47 161
MS.gene72248.t1 MTR_6g033625 32.927 328 197 7 4 314 2 323 4.31e-46 164
MS.gene72248.t1 MTR_8g009067 45.685 197 100 5 120 312 2 195 3.23e-45 159
MS.gene72248.t1 MTR_5g019580 32.602 319 177 10 9 304 10 313 1.30e-42 155
MS.gene72248.t1 MTR_8g074550 34.936 312 181 11 5 303 7 309 4.72e-41 151
MS.gene72248.t1 MTR_8g009073 44.385 187 97 5 130 312 1 184 5.23e-41 147
MS.gene72248.t1 MTR_6g033615 29.814 322 201 6 4 314 2 309 1.40e-40 149
MS.gene72248.t1 MTR_6g005660 35.019 257 160 5 1 253 1 254 2.02e-39 141
MS.gene72248.t1 MTR_5g090630 32.692 312 187 11 3 304 2 300 3.90e-39 145
MS.gene72248.t1 MTR_8g012630 29.469 414 236 9 1 364 1 408 7.95e-39 143
MS.gene72248.t1 MTR_6g033660 29.618 314 197 7 7 303 5 311 1.18e-38 144
MS.gene72248.t1 MTR_5g090670 31.288 326 194 11 4 310 3 317 3.29e-37 140
MS.gene72248.t1 MTR_5g070040 32.710 321 189 13 1 304 6 316 7.87e-37 139
MS.gene72248.t1 MTR_6g033725 29.518 332 200 8 4 314 2 320 8.55e-37 139
MS.gene72248.t1 MTR_5g090700 30.094 319 195 11 4 304 3 311 3.77e-36 137
MS.gene72248.t1 MTR_5g098930 30.844 308 192 11 7 304 6 302 3.82e-36 137
MS.gene72248.t1 MTR_6g033675 29.503 322 194 10 4 303 2 312 9.87e-35 133
MS.gene72248.t1 MTR_5g090600 31.210 314 196 10 3 305 2 306 1.12e-34 133
MS.gene72248.t1 MTR_5g019580 31.935 310 163 11 9 304 62 337 1.98e-33 130
MS.gene72248.t1 MTR_5g070090 30.408 319 191 10 10 309 15 321 3.00e-33 129
MS.gene72248.t1 MTR_5g090580 30.818 318 192 11 4 304 3 309 7.06e-33 128
MS.gene72248.t1 MTR_5g090660 30.255 314 197 10 4 304 3 307 2.77e-32 127
MS.gene72248.t1 MTR_2g040530 31.546 317 191 11 3 304 2 307 4.04e-32 126
MS.gene72248.t1 MTR_5g090620 30.063 316 197 10 4 304 3 309 4.46e-32 126
MS.gene72248.t1 MTR_2g046750 29.299 314 195 7 7 304 6 308 1.83e-31 124
MS.gene72248.t1 MTR_5g090610 29.393 313 189 11 4 304 3 295 8.79e-30 119
MS.gene72248.t1 MTR_2g046820 28.896 308 201 7 7 304 6 305 1.22e-29 119
MS.gene72248.t1 MTR_8g012730 39.645 169 83 4 144 312 4 153 2.09e-25 105
MS.gene72248.t1 MTR_5g464760 27.566 341 193 13 2 302 8 334 2.76e-24 104
MS.gene72248.t1 MTR_5g464810 27.731 357 199 15 2 314 8 349 1.90e-23 101
MS.gene72248.t1 MTR_5g064240 27.731 357 199 15 2 314 8 349 1.90e-23 101
MS.gene72248.t1 MTR_3g009500 27.843 255 167 6 4 244 3 254 3.09e-22 95.1
MS.gene72248.t1 MTR_4g082810 27.322 366 230 12 7 350 8 359 4.02e-22 97.4
MS.gene72248.t1 MTR_5g090650 26.282 312 181 13 4 304 3 276 4.49e-22 95.9
MS.gene72248.t1 MTR_2g008210 27.731 357 204 16 9 329 14 352 1.14e-21 96.7
MS.gene72248.t1 MTR_3g069690 28.302 318 192 11 2 302 3 301 1.38e-20 93.2
MS.gene72248.t1 MTR_6g078320 24.716 352 229 10 7 331 12 354 1.40e-20 93.2
MS.gene72248.t1 MTR_3g009520 26.744 258 172 6 1 244 1 255 3.21e-20 89.4
MS.gene72248.t1 MTR_6g014290 26.393 341 197 13 7 307 11 337 6.30e-20 91.3
MS.gene72248.t1 MTR_0036s0220 26.608 342 183 15 7 302 13 332 1.10e-19 90.5
MS.gene72248.t1 MTR_7g013180 26.518 313 193 8 10 302 9 304 1.15e-19 90.5
MS.gene72248.t1 MTR_3g069710 27.760 317 194 12 7 308 13 309 1.06e-18 87.8
MS.gene72248.t1 MTR_8g068330 28.173 323 188 12 7 303 9 313 1.10e-18 87.4
MS.gene72248.t1 MTR_2g098430 24.776 335 205 13 1 306 1 317 1.20e-18 87.4
MS.gene72248.t1 MTR_1g019520 65.517 58 20 0 255 312 3 60 1.61e-18 84.0
MS.gene72248.t1 MTR_1g019520 48.529 68 34 1 305 372 147 213 3.66e-11 62.8
MS.gene72248.t1 MTR_6g014220 25.740 338 201 14 8 307 12 337 7.35e-18 85.1
MS.gene72248.t1 MTR_3g479490 26.836 354 180 15 1 302 1 327 1.04e-17 84.7
MS.gene72248.t1 MTR_4g094220 25.872 344 188 14 7 302 8 332 1.73e-17 84.0
MS.gene72248.t1 MTR_6g038300 27.545 334 186 14 1 302 1 310 2.85e-17 83.2
MS.gene72248.t1 MTR_5g090690 27.273 242 133 6 75 305 31 240 3.69e-17 82.4
MS.gene72248.t1 MTR_4g064987 27.760 317 200 14 1 302 1 303 4.14e-17 82.8
MS.gene72248.t1 MTR_4g064987 27.302 315 198 13 1 302 1 297 4.48e-17 82.8
MS.gene72248.t1 MTR_5g058320 25.672 335 218 9 8 320 12 337 4.56e-17 82.8
MS.gene72248.t1 MTR_4g008630 24.100 361 235 11 2 348 10 345 4.92e-17 82.8
MS.gene72248.t1 MTR_4g082820 28.955 335 165 15 7 302 8 308 5.04e-17 82.8
MS.gene72248.t1 MTR_3g008010 24.702 336 205 12 9 307 13 337 5.39e-17 82.4
MS.gene72248.t1 MTR_3g479470 26.012 346 200 12 7 310 14 345 7.23e-17 82.0
MS.gene72248.t1 MTR_2g008226 26.606 327 210 10 1 302 1 322 1.17e-16 81.6
MS.gene72248.t1 MTR_6g038240 24.695 328 182 13 9 302 14 310 1.19e-16 81.6
MS.gene72248.t1 MTR_7g013200 25.080 311 194 10 9 302 8 296 1.21e-16 81.3
MS.gene72248.t1 MTR_6g038200 26.420 352 190 16 2 315 4 324 1.65e-16 80.9
MS.gene72248.t1 MTR_6g014040 27.273 341 193 13 9 307 13 340 2.93e-16 80.5
MS.gene72248.t1 MTR_2g008220 26.752 314 201 9 7 302 15 317 3.05e-16 80.1
MS.gene72248.t1 MTR_6g014250 25.220 341 199 15 8 307 12 337 4.77e-16 79.7
MS.gene72248.t1 MTR_5g031860 26.590 346 206 15 7 322 13 340 5.76e-16 79.3
MS.gene72248.t1 MTR_8g059425 25.588 340 211 11 2 307 6 337 9.25e-16 79.0
MS.gene72248.t1 MTR_5g087620 25.806 341 202 14 2 304 6 333 1.19e-15 78.6
MS.gene72248.t1 MTR_6g014186 23.666 431 237 17 9 360 10 427 1.82e-15 77.8
MS.gene72248.t1 MTR_7g080935 24.412 340 184 12 1 303 6 309 1.97e-15 77.8
MS.gene72248.t1 MTR_8g068340 24.808 391 232 15 2 369 8 359 2.88e-15 77.4
MS.gene72248.t1 MTR_3g479520 25.215 349 202 13 1 307 10 341 6.04e-15 76.3
MS.gene72248.t1 MTR_6g014187 25.691 362 211 16 2 320 6 352 7.69e-15 76.3
MS.gene72248.t1 MTR_7g013220 24.601 313 204 12 9 302 8 307 8.05e-15 75.9
MS.gene72248.t1 MTR_6g011340 25.472 318 185 11 31 307 33 339 9.09e-15 75.9
MS.gene72248.t1 MTR_7g013240 24.839 310 193 8 10 302 10 296 9.72e-15 75.5
MS.gene72248.t1 MTR_6g038230 32.051 234 121 11 105 315 106 324 1.05e-14 75.5
MS.gene72248.t1 MTR_6g014170 26.879 346 169 17 9 307 13 321 1.09e-14 75.5
MS.gene72248.t1 MTR_5g035560 24.925 333 183 12 3 302 8 306 1.48e-14 75.1
MS.gene72248.t1 MTR_7g055710 24.383 324 211 10 3 302 8 321 1.90e-14 74.7
MS.gene72248.t1 MTR_4g485630 25.879 313 188 10 16 302 19 313 2.18e-14 74.7
MS.gene72248.t1 MTR_7g013260 44.792 96 41 3 212 302 209 297 2.32e-14 74.3
MS.gene72248.t1 MTR_2g008225 25.625 320 197 11 7 302 16 318 2.34e-14 74.7
MS.gene72248.t1 MTR_6g013960 26.496 351 196 19 2 307 6 339 2.99e-14 74.3
MS.gene72248.t1 MTR_8g083290 25.455 330 191 11 7 302 5 313 4.66e-14 73.6
MS.gene72248.t1 MTR_4g123553 27.160 324 182 13 7 302 16 313 4.89e-14 73.6
MS.gene72248.t1 MTR_3g079480 23.836 365 215 13 7 329 22 365 4.93e-14 73.6
MS.gene72248.t1 MTR_5g035580 24.159 327 193 11 3 302 10 308 4.98e-14 73.6
MS.gene72248.t1 MTR_6g013680 29.121 182 88 7 210 352 178 357 6.62e-14 72.8
MS.gene72248.t1 MTR_4g095008 27.386 241 145 8 80 302 82 310 6.79e-14 73.2
MS.gene72248.t1 MTR_7g067120 26.332 319 177 12 4 302 7 287 8.94e-14 72.8
MS.gene72248.t1 MTR_4g485640 25.497 302 195 9 14 301 217 502 9.40e-14 73.2
MS.gene72248.t1 MTR_6g014020 25.369 339 203 11 8 307 12 339 1.09e-13 72.4
MS.gene72248.t1 MTR_5g040030 23.848 369 223 10 7 349 15 351 1.25e-13 72.4
MS.gene72248.t1 MTR_6g052375 33.571 140 77 6 169 296 27 162 1.25e-13 71.2
MS.gene72248.t1 MTR_6g036650 25.000 328 191 10 7 302 19 323 1.27e-13 72.4
MS.gene72248.t1 MTR_5g072860 26.316 342 199 12 7 318 19 337 1.44e-13 72.0
MS.gene72248.t1 MTR_0288s0020 25.000 328 201 12 7 307 11 320 1.52e-13 72.0
MS.gene72248.t1 MTR_6g042310 25.610 328 196 12 2 302 10 316 2.02e-13 71.6
MS.gene72248.t1 MTR_7g102450 25.620 363 208 13 8 348 13 335 2.22e-13 71.6
MS.gene72248.t1 MTR_7g102460 25.846 325 196 14 9 302 12 322 2.41e-13 71.6
MS.gene72248.t1 MTR_4g031800 29.861 144 87 3 174 303 168 311 2.57e-13 71.2
MS.gene72248.t1 MTR_1g029540 22.678 366 231 14 2 348 10 342 2.88e-13 71.2
MS.gene72248.t1 MTR_7g080940 23.100 329 202 11 1 303 6 309 2.90e-13 71.2
MS.gene72248.t1 MTR_5g031840 24.225 355 202 13 7 322 6 332 4.07e-13 70.9
MS.gene72248.t1 MTR_6g013450 26.271 354 208 14 8 320 12 353 4.12e-13 70.9
MS.gene72248.t1 MTR_7g070660 24.367 316 216 9 3 302 8 316 4.27e-13 70.9
MS.gene72248.t1 MTR_7g070940 37.607 117 69 2 190 302 194 310 4.41e-13 70.9
MS.gene72248.t1 MTR_8g090095 32.812 128 80 2 209 332 220 345 6.31e-13 70.1
MS.gene72248.t1 MTR_7g067330 26.183 317 182 10 3 302 6 287 1.25e-12 69.3
MS.gene72248.t1 MTR_6g014050 31.788 151 88 6 170 307 192 340 1.52e-12 68.9
MS.gene72248.t1 MTR_6g013990 37.500 120 59 4 200 307 222 337 1.67e-12 68.9
MS.gene72248.t1 MTR_6g014200 26.879 346 187 15 9 307 10 336 2.22e-12 68.6
MS.gene72248.t1 MTR_6g013435 25.847 236 129 7 170 360 61 295 2.45e-12 67.4
MS.gene72248.t1 MTR_8g071070 26.168 321 212 11 3 304 4 318 2.97e-12 68.2
MS.gene72248.t1 MTR_8g066610 24.159 327 204 8 7 302 10 323 3.51e-12 67.8
MS.gene72248.t1 MTR_7g011470 31.126 151 89 5 170 307 177 325 3.91e-12 67.8
MS.gene72248.t1 MTR_5g072810 24.000 325 199 12 3 303 8 308 5.20e-12 67.4
MS.gene72248.t1 MTR_7g011470 31.250 144 85 4 177 307 179 321 5.87e-12 67.0
MS.gene72248.t1 MTR_4g485590 29.139 151 86 4 173 302 143 293 5.98e-12 67.0
MS.gene72248.t1 MTR_0009s0240 25.926 324 205 14 3 307 4 311 6.27e-12 67.0
MS.gene72248.t1 MTR_7g102550 25.610 328 202 15 3 301 6 320 6.86e-12 67.0
MS.gene72248.t1 MTR_8g083280 36.458 96 57 1 211 302 221 316 8.14e-12 66.6
MS.gene72248.t1 MTR_6g038220 25.000 332 175 16 9 302 14 309 8.47e-12 66.6
MS.gene72248.t1 MTR_6g013440 25.364 343 196 13 9 307 14 340 8.49e-12 66.6
MS.gene72248.t1 MTR_0536s0020 34.146 123 63 5 192 301 193 310 1.05e-11 66.6
MS.gene72248.t1 MTR_8g064870 33.010 103 58 3 211 303 216 317 1.27e-11 66.2
MS.gene72248.t1 MTR_5g031830 23.889 360 222 16 7 333 13 353 1.56e-11 65.9
MS.gene72248.t1 MTR_5g016480 30.769 156 82 6 171 302 166 319 1.77e-11 65.9
MS.gene72248.t1 MTR_6g013920 28.571 154 89 5 170 307 190 338 3.23e-11 65.1
MS.gene72248.t1 MTR_7g070610 25.846 325 187 15 11 302 20 323 3.56e-11 64.7
MS.gene72248.t1 MTR_7g102560 29.762 168 86 5 191 344 194 343 4.14e-11 64.7
MS.gene72248.t1 MTR_1g062380 23.053 321 213 12 7 302 17 328 4.18e-11 64.7
MS.gene72248.t1 MTR_7g070870 34.783 115 68 3 192 302 207 318 4.50e-11 64.3
MS.gene72248.t1 MTR_6g013900 34.167 120 63 3 200 307 223 338 4.82e-11 64.3
MS.gene72248.t1 MTR_2g046620 24.204 314 204 10 7 302 17 314 5.08e-11 64.3
MS.gene72248.t1 MTR_4g485620 24.490 245 147 6 111 333 99 327 7.00e-11 63.9
MS.gene72248.t1 MTR_6g014150 25.854 205 129 5 124 307 134 336 7.34e-11 63.9
MS.gene72248.t1 MTR_5g039900 22.222 324 218 8 3 302 10 323 7.39e-11 63.9
MS.gene72248.t1 MTR_5g066410 24.679 312 200 9 9 304 1 293 8.41e-11 63.5
MS.gene72248.t1 MTR_6g014270 24.633 341 203 15 9 307 10 338 8.73e-11 63.5
MS.gene72248.t1 MTR_7g102490 24.096 332 205 14 4 302 7 324 9.09e-11 63.5
MS.gene72248.t1 MTR_7g070780 25.625 320 194 14 11 302 18 321 9.82e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72248.t1 AT4G01070 42.173 313 169 9 2 307 3 310 1.63e-69 222
MS.gene72248.t1 AT4G01070 42.173 313 169 9 2 307 3 310 1.13e-68 224
MS.gene72248.t1 AT4G01070 45.833 72 36 2 301 372 400 468 1.79e-11 65.9
MS.gene72248.t1 AT1G01420 39.241 316 181 8 3 312 8 318 1.21e-66 219
MS.gene72248.t1 AT1G01420 39.241 316 181 8 3 312 5 315 1.52e-66 218
MS.gene72248.t1 AT1G01390 39.048 315 183 7 3 312 22 332 8.29e-64 211
MS.gene72248.t1 AT1G01390 39.048 315 183 7 3 312 5 315 9.16e-64 211
MS.gene72248.t1 AT5G26310 31.373 306 191 11 8 305 9 303 3.36e-39 145
MS.gene72248.t1 AT5G66690 32.609 322 166 14 8 305 9 303 4.29e-38 142
MS.gene72248.t1 AT3G50740 31.498 327 178 13 3 305 4 308 2.71e-37 140
MS.gene72248.t1 AT3G16520 32.573 307 195 8 7 304 6 309 1.91e-36 137
MS.gene72248.t1 AT3G16520 32.573 307 195 8 7 304 6 309 2.04e-36 137
MS.gene72248.t1 AT3G21790 29.874 318 191 8 7 302 5 312 2.08e-36 138
MS.gene72248.t1 AT3G16520 32.573 307 195 8 7 304 6 309 2.15e-36 137
MS.gene72248.t1 AT3G21780 30.159 315 191 8 4 302 2 303 9.30e-36 136
MS.gene72248.t1 AT2G18570 31.935 310 186 13 9 304 8 306 3.78e-35 134
MS.gene72248.t1 AT1G07250 28.354 328 200 10 1 302 1 319 2.01e-34 132
MS.gene72248.t1 AT3G21800 29.747 316 198 8 3 302 2 309 4.96e-34 131
MS.gene72248.t1 AT4G36770 30.488 328 190 12 8 315 6 315 1.90e-33 129
MS.gene72248.t1 AT2G29730 29.073 313 193 8 10 302 9 312 1.44e-32 127
MS.gene72248.t1 AT1G07260 28.657 335 207 10 2 313 4 329 3.06e-32 126
MS.gene72248.t1 AT2G29710 29.283 321 198 9 1 302 1 311 5.83e-32 125
MS.gene72248.t1 AT3G21750 28.247 308 204 8 4 302 2 301 4.96e-31 123
MS.gene72248.t1 AT1G07240 27.673 318 205 8 10 306 9 322 1.71e-29 119
MS.gene72248.t1 AT2G29750 30.530 321 190 13 7 302 9 321 2.46e-29 118
MS.gene72248.t1 AT2G29740 29.430 316 194 10 10 302 12 321 7.63e-29 117
MS.gene72248.t1 AT4G15280 27.532 316 203 8 4 302 2 308 1.68e-27 113
MS.gene72248.t1 AT4G15280 27.532 316 203 8 4 302 34 340 2.20e-27 113
MS.gene72248.t1 AT3G21760 27.607 326 197 9 4 302 2 315 6.34e-27 111
MS.gene72248.t1 AT2G18560 32.273 220 127 7 96 304 8 216 2.09e-26 108
MS.gene72248.t1 AT4G15260 30.732 205 131 4 116 312 1 202 4.76e-26 107
MS.gene72248.t1 AT4G34131 24.661 369 210 10 7 333 11 353 2.23e-20 92.8
MS.gene72248.t1 AT1G05675 27.950 322 197 12 1 302 1 307 4.54e-20 91.7
MS.gene72248.t1 AT4G34135 25.287 348 191 9 4 307 9 331 2.97e-19 88.2
MS.gene72248.t1 AT4G34135 25.656 343 186 9 4 302 9 326 5.42e-19 88.6
MS.gene72248.t1 AT2G36800 25.000 328 210 11 16 316 22 340 5.69e-19 88.6
MS.gene72248.t1 AT1G22360 27.059 340 193 13 3 302 7 331 8.47e-19 88.2
MS.gene72248.t1 AT3G46650 24.633 341 206 10 1 320 5 315 1.23e-18 87.4
MS.gene72248.t1 AT1G22360 26.359 368 212 14 4 331 8 356 1.34e-18 87.4
MS.gene72248.t1 AT2G30140 27.010 311 196 10 7 303 14 307 1.69e-18 87.0
MS.gene72248.t1 AT2G30140 27.010 311 195 11 7 303 14 306 4.41e-18 85.9
MS.gene72248.t1 AT1G22340 25.275 364 215 14 7 331 14 359 8.46e-18 85.1
MS.gene72248.t1 AT3G55700 24.847 326 209 11 7 315 9 315 1.33e-17 84.3
MS.gene72248.t1 AT5G38010 27.554 323 191 12 2 302 6 307 1.41e-17 84.3
MS.gene72248.t1 AT2G36780 26.168 321 200 12 9 303 17 326 1.49e-17 84.3
MS.gene72248.t1 AT2G36770 25.806 310 201 11 16 303 24 326 2.79e-17 83.6
MS.gene72248.t1 AT1G10400 25.876 371 226 14 4 348 5 352 3.14e-17 83.2
MS.gene72248.t1 AT3G55710 24.540 326 214 9 7 315 9 319 4.40e-17 82.8
MS.gene72248.t1 AT3G46670 30.284 317 186 14 7 308 10 306 6.37e-17 82.4
MS.gene72248.t1 AT3G46690 25.478 314 201 9 4 302 7 302 1.39e-16 81.3
MS.gene72248.t1 AT1G05680 25.776 322 204 12 1 302 1 307 1.69e-16 80.9
MS.gene72248.t1 AT1G22370 25.076 331 198 14 7 302 14 329 2.16e-16 80.9
MS.gene72248.t1 AT5G59590 26.045 311 204 9 3 302 7 302 4.57e-16 79.7
MS.gene72248.t1 AT5G38040 26.263 297 196 11 16 302 20 303 1.05e-15 78.6
MS.gene72248.t1 AT5G12890 26.748 329 199 14 7 307 11 325 2.43e-15 77.8
MS.gene72248.t1 AT5G37950 31.280 211 120 8 103 302 77 273 3.38e-15 76.3
MS.gene72248.t1 AT5G03490 25.387 323 191 12 7 302 20 319 5.12e-15 76.6
MS.gene72248.t1 AT1G22400 26.347 334 196 15 7 302 14 335 5.24e-15 76.6
MS.gene72248.t1 AT2G36750 24.759 311 202 11 16 303 20 321 5.46e-15 76.6
MS.gene72248.t1 AT2G15480 27.074 229 137 7 92 302 109 325 5.96e-15 76.6
MS.gene72248.t1 AT2G15480 27.074 229 137 7 92 302 109 325 6.87e-15 76.3
MS.gene72248.t1 AT1G22380 24.728 368 221 16 2 331 9 358 8.23e-15 75.9
MS.gene72248.t1 AT5G37950 30.952 210 128 7 103 302 77 279 1.18e-14 74.7
MS.gene72248.t1 AT2G30150 25.079 315 198 13 7 303 14 308 1.27e-14 75.5
MS.gene72248.t1 AT2G36760 25.155 322 202 12 9 303 17 326 1.54e-14 75.1
MS.gene72248.t1 AT2G30150 25.321 312 195 13 10 303 1 292 2.18e-14 74.7
MS.gene72248.t1 AT1G78270 26.727 333 194 15 10 305 17 336 2.83e-14 74.3
MS.gene72248.t1 AT5G59580 25.161 310 205 10 4 302 7 300 3.64e-14 73.9
MS.gene72248.t1 AT2G16890 26.498 317 203 11 7 302 10 317 5.41e-14 73.6
MS.gene72248.t1 AT2G16890 26.498 317 203 11 7 302 10 317 5.45e-14 73.2
MS.gene72248.t1 AT3G02100 23.242 327 199 11 7 300 14 321 1.10e-13 72.4
MS.gene72248.t1 AT2G15490 27.778 234 127 7 92 301 106 321 1.67e-13 72.0
MS.gene72248.t1 AT2G15490 27.778 234 127 7 92 301 106 321 1.74e-13 72.0
MS.gene72248.t1 AT3G46680 26.480 321 195 12 1 302 4 302 2.15e-13 71.6
MS.gene72248.t1 AT5G14860 24.437 311 207 9 16 302 18 324 3.13e-13 71.2
MS.gene72248.t1 AT2G36970 24.885 217 148 7 98 302 109 322 3.15e-13 71.2
MS.gene72248.t1 AT2G31750 37.963 108 51 3 209 302 202 307 4.99e-13 70.5
MS.gene72248.t1 AT1G22370 34.579 107 55 3 210 302 54 159 5.06e-13 69.7
MS.gene72248.t1 AT3G46700 24.601 313 200 9 4 302 7 297 5.11e-13 70.5
MS.gene72248.t1 AT2G31750 37.963 108 51 3 209 302 202 307 5.27e-13 70.5
MS.gene72248.t1 AT1G51210 27.129 317 194 13 4 302 18 315 8.62e-13 69.7
MS.gene72248.t1 AT5G49690 23.473 311 213 7 7 302 11 311 9.66e-13 69.7
MS.gene72248.t1 AT2G36790 25.439 342 204 14 9 316 16 340 1.38e-12 69.3
MS.gene72248.t1 AT2G28080 28.342 187 123 6 124 302 142 325 3.80e-12 67.8
MS.gene72248.t1 AT4G15550 29.208 202 124 7 109 301 123 314 4.52e-12 67.8
MS.gene72248.t1 AT2G31790 27.273 220 116 8 111 302 106 309 4.99e-12 67.4
MS.gene72248.t1 AT3G46660 27.457 346 212 13 4 323 12 344 7.24e-12 67.0
MS.gene72248.t1 AT3G21560 25.108 231 156 7 84 302 98 323 7.78e-12 67.0
MS.gene72248.t1 AT3G53160 25.000 324 198 12 9 302 11 319 2.18e-11 65.5
MS.gene72248.t1 AT1G73880 23.765 324 210 13 4 305 12 320 2.62e-11 65.1
MS.gene72248.t1 AT3G53150 24.138 319 209 10 9 302 25 335 4.91e-11 64.3
MS.gene72248.t1 AT4G15480 34.000 100 60 2 211 304 227 326 6.22e-11 64.3
MS.gene72248.t1 AT2G26480 34.783 138 82 3 170 302 163 297 9.59e-11 63.5

Find 68 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCAATACTTTCAGTAATT+TGG 0.100876 6.3:+81465080 MS.gene72248:CDS
CAAACATGTTAGTGTGTTTA+AGG 0.162130 6.3:+81465193 MS.gene72248:CDS
ATGAGTTTCATTTGTGTTGC+AGG 0.264646 6.3:-81464685 None:intergenic
CAACTCAATGAGTTAGCTTT+TGG 0.270638 6.3:+81465288 MS.gene72248:CDS
CATGATTCTCTTTATAGCTT+TGG 0.310224 6.3:-81465694 None:intergenic
TCTCTCTTGAAGAAACCTTA+TGG 0.320411 6.3:-81465112 None:intergenic
TACGAAACGGTAAATGTTCC+TGG 0.332782 6.3:+81464937 MS.gene72248:CDS
TGAAGAAACCTTATGGCTTC+CGG 0.352971 6.3:-81465105 None:intergenic
TTTACTTCATCATGAAGAAA+TGG 0.375355 6.3:-81464724 None:intergenic
CACATCAAGAATTGATTTGT+AGG 0.382627 6.3:-81465025 None:intergenic
TTTGACTCATTTCTAATGAT+AGG 0.384201 6.3:-81465162 None:intergenic
CTTGATCTTTCACAGTTAAA+CGG 0.397927 6.3:-81464997 None:intergenic
TTCCATGTCAAAGAGCTTCC+CGG 0.406355 6.3:+81464973 MS.gene72248:CDS
GAAGCAGCTTCATCGAGGTT+TGG 0.425854 6.3:-81464892 None:intergenic
TTGATCTTTCACAGTTAAAC+GGG 0.428058 6.3:-81464996 None:intergenic
TAAGTGAGCATGGTTCTTCT+AGG 0.434640 6.3:+81465784 MS.gene72248:CDS
TACTTTCAGTAATTTGGAAC+CGG 0.436232 6.3:+81465086 MS.gene72248:CDS
TGGGAATGAGGAATGTGATA+TGG 0.445807 6.3:-81464549 None:intergenic
AAAAGAAAAGGTAAGACAAA+AGG 0.448905 6.3:-81464831 None:intergenic
AGAACAGTGAAGTTCATGTT+TGG 0.465285 6.3:-81464622 None:intergenic
GTTAGTGTGTTTAAGGTGGT+TGG 0.466646 6.3:+81465200 MS.gene72248:CDS
GATTGCATGGAAGGAGTTAG+TGG 0.480920 6.3:-81464580 None:intergenic
ATTTGGAACCGGAAGCCATA+AGG 0.482874 6.3:+81465097 MS.gene72248:CDS
CCTATGGTTTATGATGAAAC+CGG 0.486276 6.3:+81465648 MS.gene72248:CDS
TTCAAGATGGATTGCATGGA+AGG 0.487127 6.3:-81464589 None:intergenic
CTTTCACAGTTAAACGGGCC+GGG 0.497981 6.3:-81464991 None:intergenic
ACAGTGAAGTTCATGTTTGG+TGG 0.503055 6.3:-81464619 None:intergenic
ACTCAACTTGTGGAATCAAA+TGG 0.508563 6.3:-81464492 None:intergenic
AAGGTCTTCAATGTTGACTT+GGG 0.511276 6.3:-81464647 None:intergenic
CAGCTCCTGAAGAAAAGAAA+AGG 0.514556 6.3:-81464843 None:intergenic
CTTAGAATCAAGTTACGAAA+CGG 0.516387 6.3:+81464924 MS.gene72248:CDS
ATTGCTATGGTTCCTTCACC+TGG 0.517578 6.3:+81464463 MS.gene72248:CDS
TATGGTACTCGTTGTGATGT+TGG 0.520534 6.3:-81464531 None:intergenic
ATGTGCTCAAAGTGGCAGTA+AGG 0.521743 6.3:+81465625 MS.gene72248:intron
TTTCTAATGATAGGTCCAAC+CGG 0.524631 6.3:-81465153 None:intergenic
ACATTCCTCATTCCCACACT+TGG 0.525207 6.3:+81464556 MS.gene72248:CDS
AAACCTAGTGTTTATCCGGT+TGG 0.530377 6.3:+81465138 MS.gene72248:CDS
GTGGACCAAGTGTGGGAATG+AGG 0.530898 6.3:-81464561 None:intergenic
GAGTTGTCACAAGTTCTTGT+GGG 0.532027 6.3:+81465320 MS.gene72248:CDS
CAAAGCTATAAAGAGAATCA+TGG 0.532183 6.3:+81465695 MS.gene72248:CDS
CAAAGTGGCAGTAAGGCCTA+TGG 0.540784 6.3:+81465632 MS.gene72248:intron
AGGAGTTAGTGGACCAAGTG+TGG 0.541159 6.3:-81464569 None:intergenic
GAAGGTCTTCAATGTTGACT+TGG 0.545743 6.3:-81464648 None:intergenic
GGAAGCTCTTTGACATGGAA+AGG 0.546640 6.3:-81464970 None:intergenic
AGTGTTCAAGATGGATTGCA+TGG 0.550670 6.3:-81464593 None:intergenic
GGAATCAAATGGCTCAGTCC+AGG 0.554575 6.3:-81464481 None:intergenic
CAGGTTCAAGATTATGTGGA+AGG 0.557674 6.3:-81464666 None:intergenic
GTTGCAGGTTCAAGATTATG+TGG 0.558142 6.3:-81464670 None:intergenic
TCTTTCACAGTTAAACGGGC+CGG 0.558439 6.3:-81464992 None:intergenic
TGAGTTGTCACAAGTTCTTG+TGG 0.567113 6.3:+81465319 MS.gene72248:CDS
AAAATCAAAGAATTGAGTGT+TGG 0.569192 6.3:+81465747 MS.gene72248:CDS
TTTAGCAACATCGTGTGCAT+CGG 0.569814 6.3:-81464800 None:intergenic
CCGGTTTCATCATAAACCAT+AGG 0.577420 6.3:-81465648 None:intergenic
GAACAAGACATGCATTGCTA+TGG 0.581310 6.3:+81464450 MS.gene72248:CDS
TGGTGGAAGAGTGTTCAAGA+TGG 0.583956 6.3:-81464602 None:intergenic
CTATGGTTTATGATGAAACC+GGG 0.592637 6.3:+81465649 MS.gene72248:CDS
AAATGGCTCAGTCCAGGTGA+AGG 0.593894 6.3:-81464475 None:intergenic
TCTCTACTCTAGCATTGAAG+TGG 0.599570 6.3:+81465814 MS.gene72248:CDS
GGCCGGGAAGCTCTTTGACA+TGG 0.608641 6.3:-81464975 None:intergenic
GGAGTTAGTGGACCAAGTGT+GGG 0.621400 6.3:-81464568 None:intergenic
AACCGGGATAATAAAACAAG+AGG 0.622856 6.3:+81465665 MS.gene72248:CDS
GCTATAAAGAGAATCATGGA+AGG 0.638274 6.3:+81465699 MS.gene72248:CDS
ACATGTTAGTGTGTTTAAGG+TGG 0.646806 6.3:+81465196 MS.gene72248:CDS
GAAACTGTACTAAGTGAGCA+TGG 0.648272 6.3:+81465774 MS.gene72248:CDS
AGGTCTTCAATGTTGACTTG+GGG 0.654290 6.3:-81464646 None:intergenic
GGTCCAACCGGATAAACACT+AGG 0.660497 6.3:-81465141 None:intergenic
TGCTGCAGACTAAAGCGACA+AGG 0.688218 6.3:-81464768 None:intergenic
GAGTAGAAGCAGCTTCATCG+AGG 0.713656 6.3:-81464897 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAATACTTTCAGTAATT+TGG + chr6.3:81465080-81465099 MS.gene72248:CDS 20.0%
!! TTAGAAAGAACAAAAGAAAA+TGG + chr6.3:81465429-81465448 MS.gene72248:intron 20.0%
! AAAAGAAAAGGTAAGACAAA+AGG - chr6.3:81464834-81464853 None:intergenic 25.0%
! AAAATCAAAGAATTGAGTGT+TGG + chr6.3:81465747-81465766 MS.gene72248:CDS 25.0%
! CAAAAATCATCATTGTTTGA+TGG + chr6.3:81465051-81465070 MS.gene72248:CDS 25.0%
! TTTACTTCATCATGAAGAAA+TGG - chr6.3:81464727-81464746 None:intergenic 25.0%
! TTTGACTCATTTCTAATGAT+AGG - chr6.3:81465165-81465184 None:intergenic 25.0%
!! GTTCTTTCTAAAAAACCATT+TGG - chr6.3:81465420-81465439 None:intergenic 25.0%
!!! TCTGTTATTTTTGTCTCTTT+TGG + chr6.3:81465240-81465259 MS.gene72248:CDS 25.0%
ACAAAAATAACAGAACTTGG+TGG - chr6.3:81465234-81465253 None:intergenic 30.0%
AGAAAAACCTAGTGTTTATC+CGG + chr6.3:81465134-81465153 MS.gene72248:CDS 30.0%
CAAACATGTTAGTGTGTTTA+AGG + chr6.3:81465193-81465212 MS.gene72248:CDS 30.0%
CAAAGCTATAAAGAGAATCA+TGG + chr6.3:81465695-81465714 MS.gene72248:CDS 30.0%
CATGATTCTCTTTATAGCTT+TGG - chr6.3:81465697-81465716 None:intergenic 30.0%
CCATTTGGTAAATACTCTAA+TGG - chr6.3:81465405-81465424 None:intergenic 30.0%
CTTAGAATCAAGTTACGAAA+CGG + chr6.3:81464924-81464943 MS.gene72248:CDS 30.0%
CTTGATCTTTCACAGTTAAA+CGG - chr6.3:81465000-81465019 None:intergenic 30.0%
GAGACAAAAATAACAGAACT+TGG - chr6.3:81465237-81465256 None:intergenic 30.0%
TTGATCTTTCACAGTTAAAC+GGG - chr6.3:81464999-81465018 None:intergenic 30.0%
! CCATTAGAGTATTTACCAAA+TGG + chr6.3:81465402-81465421 MS.gene72248:intron 30.0%
! TACTTTCAGTAATTTGGAAC+CGG + chr6.3:81465086-81465105 MS.gene72248:CDS 30.0%
! TCTTACCTTTTCTTTTCTTC+AGG + chr6.3:81464838-81464857 MS.gene72248:CDS 30.0%
!! AACAAAAGAAAATGGACTAG+TGG + chr6.3:81465437-81465456 MS.gene72248:intron 30.0%
!! ATTTTTGTCTCTTTTGGAAG+TGG + chr6.3:81465246-81465265 MS.gene72248:CDS 30.0%
!! CACATCAAGAATTGATTTGT+AGG - chr6.3:81465028-81465047 None:intergenic 30.0%
!!! GTTTTTTAAGTCATTGTGGT+TGG + chr6.3:81465511-81465530 MS.gene72248:intron 30.0%
!!! TCTAGTTCTGCTTATTTTAG+TGG + chr6.3:81465366-81465385 MS.gene72248:intron 30.0%
!!! TTCCTCTTGTTTTATTATCC+CGG - chr6.3:81465670-81465689 None:intergenic 30.0%
AACAATGGCCATGTAATCAA+CGG - chr6.3:81465570-81465589 None:intergenic 35.0%
AACCGGGATAATAAAACAAG+AGG + chr6.3:81465665-81465684 MS.gene72248:CDS 35.0%
ACATGTTAGTGTGTTTAAGG+TGG + chr6.3:81465196-81465215 MS.gene72248:CDS 35.0%
ACTCAACTTGTGGAATCAAA+TGG - chr6.3:81464495-81464514 None:intergenic 35.0%
AGAACAGTGAAGTTCATGTT+TGG - chr6.3:81464625-81464644 None:intergenic 35.0%
ATGAGTTTCATTTGTGTTGC+AGG - chr6.3:81464688-81464707 None:intergenic 35.0%
ATTCTTGGTCATGGATCAAT+TGG + chr6.3:81465486-81465505 MS.gene72248:intron 35.0%
CCTATGGTTTATGATGAAAC+CGG + chr6.3:81465648-81465667 MS.gene72248:CDS 35.0%
CTATGGTTTATGATGAAACC+GGG + chr6.3:81465649-81465668 MS.gene72248:CDS 35.0%
GCTATAAAGAGAATCATGGA+AGG + chr6.3:81465699-81465718 MS.gene72248:CDS 35.0%
TCTCTCTTGAAGAAACCTTA+TGG - chr6.3:81465115-81465134 None:intergenic 35.0%
TGGAAAGGAATAGAAAAACC+AGG - chr6.3:81464958-81464977 None:intergenic 35.0%
TTTCTAATGATAGGTCCAAC+CGG - chr6.3:81465156-81465175 None:intergenic 35.0%
! AGTTTTGCAAACTCAACTTG+TGG - chr6.3:81464505-81464524 None:intergenic 35.0%
! TTGTGGTTGGAGTTCAATTT+TGG + chr6.3:81465524-81465543 MS.gene72248:intron 35.0%
!! AAGGTCTTCAATGTTGACTT+GGG - chr6.3:81464650-81464669 None:intergenic 35.0%
!! ATTTTGGAGAGTGTGGTTAA+CGG + chr6.3:81465540-81465559 MS.gene72248:intron 35.0%
!!! CAACTCAATGAGTTAGCTTT+TGG + chr6.3:81465288-81465307 MS.gene72248:CDS 35.0%
!!! CGACAAGGTTAGTTTTTGAA+AGG - chr6.3:81464756-81464775 None:intergenic 35.0%
!!! GGTGGTTTTTTAAGTCATTG+TGG + chr6.3:81465507-81465526 MS.gene72248:intron 35.0%
AAACCTAGTGTTTATCCGGT+TGG + chr6.3:81465138-81465157 MS.gene72248:CDS 40.0%
ACAGTGAAGTTCATGTTTGG+TGG - chr6.3:81464622-81464641 None:intergenic 40.0%
ATCCTTTGCTCTGCAAACAA+TGG - chr6.3:81465585-81465604 None:intergenic 40.0%
CAGCTCCTGAAGAAAAGAAA+AGG - chr6.3:81464846-81464865 None:intergenic 40.0%
CAGGTTCAAGATTATGTGGA+AGG - chr6.3:81464669-81464688 None:intergenic 40.0%
CCGGTTTCATCATAAACCAT+AGG - chr6.3:81465651-81465670 None:intergenic 40.0%
GAAACTGTACTAAGTGAGCA+TGG + chr6.3:81465774-81465793 MS.gene72248:CDS 40.0%
GAACAAGACATGCATTGCTA+TGG + chr6.3:81464450-81464469 MS.gene72248:CDS 40.0%
GAGTTGTCACAAGTTCTTGT+GGG + chr6.3:81465320-81465339 MS.gene72248:CDS 40.0%
GCAGAACTAGAATGCTTACT+TGG - chr6.3:81465357-81465376 None:intergenic 40.0%
GTTGCAGGTTCAAGATTATG+TGG - chr6.3:81464673-81464692 None:intergenic 40.0%
TAAGTGAGCATGGTTCTTCT+AGG + chr6.3:81465784-81465803 MS.gene72248:CDS 40.0%
TACGAAACGGTAAATGTTCC+TGG + chr6.3:81464937-81464956 MS.gene72248:CDS 40.0%
TATGGTACTCGTTGTGATGT+TGG - chr6.3:81464534-81464553 None:intergenic 40.0%
TGAAGAAACCTTATGGCTTC+CGG - chr6.3:81465108-81465127 None:intergenic 40.0%
TGACCAAGAATCTCAACTTG+TGG - chr6.3:81465477-81465496 None:intergenic 40.0%
TGAGTTGTCACAAGTTCTTG+TGG + chr6.3:81465319-81465338 MS.gene72248:CDS 40.0%
TGGGAATGAGGAATGTGATA+TGG - chr6.3:81464552-81464571 None:intergenic 40.0%
TTTAGCAACATCGTGTGCAT+CGG - chr6.3:81464803-81464822 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG + chr6.3:81465477-81465496 MS.gene72248:intron 40.0%
! GAAGGTCTTCAATGTTGACT+TGG - chr6.3:81464651-81464670 None:intergenic 40.0%
! GTTAGTGTGTTTAAGGTGGT+TGG + chr6.3:81465200-81465219 MS.gene72248:CDS 40.0%
! TCTCTACTCTAGCATTGAAG+TGG + chr6.3:81465814-81465833 MS.gene72248:CDS 40.0%
!! AGGTCTTCAATGTTGACTTG+GGG - chr6.3:81464649-81464668 None:intergenic 40.0%
!! AGTGTTCAAGATGGATTGCA+TGG - chr6.3:81464596-81464615 None:intergenic 40.0%
!! ATGGACTAGTGGTTACATCA+TGG + chr6.3:81465448-81465467 MS.gene72248:intron 40.0%
!! GAGTTCAATTTTGGAGAGTG+TGG + chr6.3:81465533-81465552 MS.gene72248:intron 40.0%
!! TGGACTAGTGGTTACATCAT+GGG + chr6.3:81465449-81465468 MS.gene72248:intron 40.0%
!! TTCAAGATGGATTGCATGGA+AGG - chr6.3:81464592-81464611 None:intergenic 40.0%
!! TTTGTCTCTTTTGGAAGTGG+TGG + chr6.3:81465249-81465268 MS.gene72248:CDS 40.0%
ACATTCCTCATTCCCACACT+TGG + chr6.3:81464556-81464575 MS.gene72248:CDS 45.0%
ACTCACTGATGTGCTCAAAG+TGG + chr6.3:81465617-81465636 MS.gene72248:intron 45.0%
ATGTGCTCAAAGTGGCAGTA+AGG + chr6.3:81465625-81465644 MS.gene72248:intron 45.0%
ATTGCTATGGTTCCTTCACC+TGG + chr6.3:81464463-81464482 MS.gene72248:CDS 45.0%
CTTGGTCATGGATCAATTGG+TGG + chr6.3:81465489-81465508 MS.gene72248:intron 45.0%
GATTGCATGGAAGGAGTTAG+TGG - chr6.3:81464583-81464602 None:intergenic 45.0%
GGAAGCTCTTTGACATGGAA+AGG - chr6.3:81464973-81464992 None:intergenic 45.0%
TCTTTCACAGTTAAACGGGC+CGG - chr6.3:81464995-81465014 None:intergenic 45.0%
TTCCATGTCAAAGAGCTTCC+CGG + chr6.3:81464973-81464992 MS.gene72248:CDS 45.0%
! ACGGCATACCGTTGATTACA+TGG + chr6.3:81465559-81465578 MS.gene72248:intron 45.0%
! ATTTGGAACCGGAAGCCATA+AGG + chr6.3:81465097-81465116 MS.gene72248:CDS 45.0%
! GCACCACAAGTTGAGATTCT+TGG + chr6.3:81465471-81465490 MS.gene72248:intron 45.0%
!! TGGTGGAAGAGTGTTCAAGA+TGG - chr6.3:81464605-81464624 None:intergenic 45.0%
AAATGGCTCAGTCCAGGTGA+AGG - chr6.3:81464478-81464497 None:intergenic 50.0%
CAAAGTGGCAGTAAGGCCTA+TGG + chr6.3:81465632-81465651 MS.gene72248:intron 50.0%
CTTTCACAGTTAAACGGGCC+GGG - chr6.3:81464994-81465013 None:intergenic 50.0%
GAAGCAGCTTCATCGAGGTT+TGG - chr6.3:81464895-81464914 None:intergenic 50.0%
GAGTAGAAGCAGCTTCATCG+AGG - chr6.3:81464900-81464919 None:intergenic 50.0%
GGAATCAAATGGCTCAGTCC+AGG - chr6.3:81464484-81464503 None:intergenic 50.0%
GGCCATTGTTTGCAGAGCAA+AGG + chr6.3:81465580-81465599 MS.gene72248:intron 50.0%
GGTCCAACCGGATAAACACT+AGG - chr6.3:81465144-81465163 None:intergenic 50.0%
TGCTGCAGACTAAAGCGACA+AGG - chr6.3:81464771-81464790 None:intergenic 50.0%
! AGGAGTTAGTGGACCAAGTG+TGG - chr6.3:81464572-81464591 None:intergenic 50.0%
! GGAGTTAGTGGACCAAGTGT+GGG - chr6.3:81464571-81464590 None:intergenic 50.0%
GTGGACCAAGTGTGGGAATG+AGG - chr6.3:81464564-81464583 None:intergenic 55.0%
GGCCGGGAAGCTCTTTGACA+TGG - chr6.3:81464978-81464997 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 81464445 81465842 81464445 ID=MS.gene72248
chr6.3 mRNA 81464445 81465842 81464445 ID=MS.gene72248.t1;Parent=MS.gene72248
chr6.3 exon 81464445 81465357 81464445 ID=MS.gene72248.t1.exon1;Parent=MS.gene72248.t1
chr6.3 CDS 81464445 81465357 81464445 ID=cds.MS.gene72248.t1;Parent=MS.gene72248.t1
chr6.3 exon 81465637 81465842 81465637 ID=MS.gene72248.t1.exon2;Parent=MS.gene72248.t1
chr6.3 CDS 81465637 81465842 81465637 ID=cds.MS.gene72248.t1;Parent=MS.gene72248.t1
Gene Sequence

>MS.gene72248

ATGGAGAACAAGACATGCATTGCTATGGTTCCTTCACCTGGACTGAGCCATTTGATTCCACAAGTTGAGTTTGCAAAACTATTAATCCAACATCACAACGAGTACCATATCACATTCCTCATTCCCACACTTGGTCCACTAACTCCTTCCATGCAATCCATCTTGAACACTCTTCCACCAAACATGAACTTCACTGTTCTTCCCCAAGTCAACATTGAAGACCTTCCACATAATCTTGAACCTGCAACACAAATGAAACTCATAGTGAAACACTCTATTCCATTTCTTCATGATGAAGTAAAATCACTCCTTTCAAAAACTAACCTTGTCGCTTTAGTCTGCAGCATGTTTTCAACCGATGCACACGATGTTGCTAAACATTTCAACCTTTTGTCTTACCTTTTCTTTTCTTCAGGAGCTGTTTTATTCTCTTTCTTTCTCACTCTTCCAAACCTCGATGAAGCTGCTTCTACTCAGTTCTTAGAATCAAGTTACGAAACGGTAAATGTTCCTGGTTTTTCTATTCCTTTCCATGTCAAAGAGCTTCCCGGCCCGTTTAACTGTGAAAGATCAAGTGATACCTACAAATCAATTCTTGATGTGTGTCAAAAATCATCATTGTTTGATGGTGTTATAATCAATACTTTCAGTAATTTGGAACCGGAAGCCATAAGGTTTCTTCAAGAGAGAGAAAAACCTAGTGTTTATCCGGTTGGACCTATCATTAGAAATGAGTCAAATAATGAAGCAAACATGTTAGTGTGTTTAAGGTGGTTGGAAAATCAGCCACCAAGTTCTGTTATTTTTGTCTCTTTTGGAAGTGGTGGAACACTCTCTCAAGATCAACTCAATGAGTTAGCTTTTGGTCTAGAATTGAGTTGTCACAAGTTCTTGTGGGTTGTGAGAGCTCCAAGTAAGCATTCTAGTTCTGCTTATTTTAGTGGTCAAAACAATGATCCATTAGAGTATTTACCAAATGGTTTTTTAGAAAGAACAAAAGAAAATGGACTAGTGGTTACATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGATCAATTGGTGGTTTTTTAAGTCATTGTGGTTGGAGTTCAATTTTGGAGAGTGTGGTTAACGGCATACCGTTGATTACATGGCCATTGTTTGCAGAGCAAAGGATGAATGCAAAATTACTCACTGATGTGCTCAAAGTGGCAGTAAGGCCTATGGTTTATGATGAAACCGGGATAATAAAACAAGAGGAAGTCGCCAAAGCTATAAAGAGAATCATGGAAGGAGATGAAAGCTTTGAAATTCGAAAGAAAATCAAAGAATTGAGTGTTGGTGCTGAAACTGTACTAAGTGAGCATGGTTCTTCTAGGAAAGCATTCTCTACTCTAGCATTGAAGTGGCAATAA

Protein sequence

>MS.gene72248.t1

MENKTCIAMVPSPGLSHLIPQVEFAKLLIQHHNEYHITFLIPTLGPLTPSMQSILNTLPPNMNFTVLPQVNIEDLPHNLEPATQMKLIVKHSIPFLHDEVKSLLSKTNLVALVCSMFSTDAHDVAKHFNLLSYLFFSSGAVLFSFFLTLPNLDEAASTQFLESSYETVNVPGFSIPFHVKELPGPFNCERSSDTYKSILDVCQKSSLFDGVIINTFSNLEPEAIRFLQEREKPSVYPVGPIIRNESNNEANMLVCLRWLENQPPSSVIFVSFGSGGTLSQDQLNELAFGLELSCHKFLWVVRAPMAVRPMVYDETGIIKQEEVAKAIKRIMEGDESFEIRKKIKELSVGAETVLSEHGSSRKAFSTLALKWQ