Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72324.t1 | XP_013467939.1 | 77.4 | 248 | 47 | 3 | 1 | 239 | 1 | 248 | 3.20E-93 | 352.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72324.t1 | Q9XIN8 | 45.2 | 221 | 105 | 6 | 15 | 221 | 11 | 229 | 3.8e-39 | 164.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72324.t1 | A0A072VK35 | 77.4 | 248 | 47 | 3 | 1 | 239 | 1 | 248 | 2.3e-93 | 352.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051138 | MS.gene72324 | 0.81347 | 2.52E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene72324 | 0.831996 | 1.22E-55 | -1.69E-46 |
| MS.gene056857 | MS.gene72324 | 0.886443 | 3.41E-72 | -1.69E-46 |
| MS.gene058068 | MS.gene72324 | 0.802192 | 6.30E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72324.t1 | MTR_1g058490 | 77.912 | 249 | 44 | 4 | 1 | 239 | 1 | 248 | 1.41e-125 | 368 |
| MS.gene72324.t1 | MTR_7g105320 | 52.549 | 255 | 101 | 5 | 1 | 239 | 2 | 252 | 9.82e-67 | 218 |
| MS.gene72324.t1 | MTR_1g060460 | 64.935 | 154 | 36 | 2 | 1 | 154 | 27 | 162 | 1.06e-56 | 186 |
| MS.gene72324.t1 | MTR_6g014730 | 67.456 | 169 | 7 | 3 | 238 | 405 | 1 | 122 | 1.11e-56 | 189 |
| MS.gene72324.t1 | MTR_2g086920 | 36.937 | 222 | 125 | 4 | 17 | 224 | 6 | 226 | 3.67e-37 | 139 |
| MS.gene72324.t1 | MTR_4g052460 | 41.892 | 222 | 113 | 5 | 19 | 225 | 24 | 244 | 8.46e-36 | 135 |
| MS.gene72324.t1 | MTR_3g466350 | 38.095 | 231 | 124 | 9 | 16 | 230 | 6 | 233 | 1.50e-30 | 120 |
| MS.gene72324.t1 | MTR_8g021080 | 34.579 | 214 | 114 | 6 | 16 | 211 | 4 | 209 | 6.97e-28 | 112 |
| MS.gene72324.t1 | MTR_3g466280 | 33.333 | 243 | 129 | 7 | 14 | 235 | 4 | 234 | 6.23e-26 | 106 |
| MS.gene72324.t1 | MTR_8g022730 | 31.878 | 229 | 132 | 8 | 16 | 225 | 4 | 227 | 2.80e-19 | 88.2 |
| MS.gene72324.t1 | MTR_3g466300 | 35.955 | 178 | 93 | 6 | 16 | 185 | 6 | 170 | 6.74e-19 | 86.3 |
| MS.gene72324.t1 | MTR_3g466330 | 36.310 | 168 | 90 | 6 | 16 | 177 | 6 | 162 | 5.05e-16 | 77.4 |
| MS.gene72324.t1 | MTR_1g072360 | 27.473 | 273 | 139 | 9 | 28 | 244 | 20 | 289 | 1.61e-14 | 75.5 |
| MS.gene72324.t1 | MTR_1g072360 | 27.473 | 273 | 139 | 9 | 28 | 244 | 40 | 309 | 2.94e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72324.t1 | AT2G27310 | 45.366 | 205 | 96 | 6 | 15 | 205 | 11 | 213 | 1.77e-46 | 164 |
| MS.gene72324.t1 | AT3G44326 | 42.149 | 242 | 119 | 5 | 18 | 238 | 23 | 264 | 2.36e-46 | 165 |
| MS.gene72324.t1 | AT2G36090 | 44.538 | 238 | 101 | 8 | 13 | 239 | 14 | 231 | 2.91e-46 | 163 |
Find 131 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCTGACTTTGAGTTTCA+TGG | 0.217019 | 1.4:-49558647 | None:intergenic |
| TCGTGATCACAAGGATTAAA+AGG | 0.233055 | 1.4:-49558531 | None:intergenic |
| GGTGATGTTGGCGGAGAATA+TGG | 0.262232 | 1.4:+49557312 | MS.gene72324:CDS |
| GCTATCATGATTTGCATTTC+CGG | 0.272726 | 1.4:+49556635 | None:intergenic |
| TCTGTTCCGACGAACATCTC+TGG | 0.313553 | 1.4:+49556789 | MS.gene72324:CDS |
| TGGAGGTGGTGCAGCGGAGT+GGG | 0.320619 | 1.4:+49557212 | MS.gene72324:CDS |
| TTCCTTTGAAGATCATATAA+TGG | 0.332334 | 1.4:-49559285 | None:intergenic |
| ATTGATTGCGTCAATGTATT+CGG | 0.349244 | 1.4:+49559076 | MS.gene72324:CDS |
| GAAACGGAGAGCACCGGAAC+CGG | 0.364838 | 1.4:-49557048 | None:intergenic |
| CAATATGAAGGAACAGATAA+TGG | 0.373376 | 1.4:+49558960 | MS.gene72324:intron |
| CTGTTTGCAACGGTGGTTTA+CGG | 0.378960 | 1.4:+49557247 | MS.gene72324:CDS |
| ATACATTACCATCAGCATTA+AGG | 0.380619 | 1.4:-49558866 | None:intergenic |
| ATCTGTTTCTGAATTGTTTG+TGG | 0.381548 | 1.4:-49558682 | None:intergenic |
| GTGGAGGTGGTGCAGCGGAG+TGG | 0.384568 | 1.4:+49557211 | MS.gene72324:CDS |
| GGGACAATCTTCAATGTTGT+TGG | 0.386482 | 1.4:+49559168 | MS.gene72324:CDS |
| GGAGGTGGTGCAGCGGAGTG+GGG | 0.386877 | 1.4:+49557213 | MS.gene72324:CDS |
| AAACCGTGACCACCCGGTTC+CGG | 0.395240 | 1.4:+49557035 | MS.gene72324:CDS |
| GGGGAGATTTGAGGATTCCT+TGG | 0.432153 | 1.4:-49559230 | None:intergenic |
| GTTTAAATCCAAGTGTGAAA+AGG | 0.434095 | 1.4:+49559147 | MS.gene72324:CDS |
| GGGAGGAGTTGAGGCTGAGC+TGG | 0.438878 | 1.4:+49557134 | MS.gene72324:CDS |
| TTTAAATCCAAGTGTGAAAA+GGG | 0.445385 | 1.4:+49559148 | MS.gene72324:CDS |
| AACGGCTGAGATTAAACTTA+GGG | 0.445872 | 1.4:-49556963 | None:intergenic |
| CGGAACAGAGAGAGTTGAGT+TGG | 0.450504 | 1.4:-49556775 | None:intergenic |
| TCAGCATTAAGGACTCCTTC+AGG | 0.455166 | 1.4:-49558855 | None:intergenic |
| CTCCCCTTCAACACCTTCCA+TGG | 0.455373 | 1.4:+49559247 | MS.gene72324:CDS |
| TCACATCCTTGTTATCTAGT+AGG | 0.459978 | 1.4:-49557078 | None:intergenic |
| GTCGAGTGGCAAGGCGGTGG+AGG | 0.460504 | 1.4:+49557195 | MS.gene72324:CDS |
| GAGTGGCAAGGCGGTGGAGG+TGG | 0.463232 | 1.4:+49557198 | MS.gene72324:CDS |
| ATGTTTAAATCTATGTTAAG+AGG | 0.463587 | 1.4:-49558507 | None:intergenic |
| GATCGATCCGGTGAGTCAAC+GGG | 0.464032 | 1.4:+49557162 | MS.gene72324:CDS |
| CACATACTCACACGCCTTGA+CGG | 0.470491 | 1.4:+49556719 | MS.gene72324:CDS |
| CGTGATCACAAGGATTAAAA+GGG | 0.470820 | 1.4:-49558530 | None:intergenic |
| CAACGGCTGAGATTAAACTT+AGG | 0.475204 | 1.4:-49556964 | None:intergenic |
| AGTTGCTGCATTTGAAGAGC+TGG | 0.479414 | 1.4:-49559206 | None:intergenic |
| AACTCAAAGTCAGGAAATAG+AGG | 0.483039 | 1.4:+49558653 | MS.gene72324:CDS |
| TGTCATTAAACGTGTGGAAA+GGG | 0.488476 | 1.4:+49559109 | MS.gene72324:CDS |
| TGTCATAAACTTCTTGTGGT+TGG | 0.489264 | 1.4:-49558770 | None:intergenic |
| CTGAGATTAAACTTAGGGTT+CGG | 0.493437 | 1.4:-49556958 | None:intergenic |
| GATTCCATGGAAGGTGTTGA+AGG | 0.495053 | 1.4:-49559251 | None:intergenic |
| GAGAGAGTTGAGTTGGGAGC+AGG | 0.498381 | 1.4:-49556768 | None:intergenic |
| AAGCGAGAGCGGCGCCGTCA+AGG | 0.500823 | 1.4:-49556733 | None:intergenic |
| GGTGTTGAAGGGGAGATTTG+AGG | 0.503859 | 1.4:-49559239 | None:intergenic |
| CGGAGAACGTTGAGATTACA+TGG | 0.505020 | 1.4:-49556862 | None:intergenic |
| GGTGGTGCAGCGGAGTGGGG+AGG | 0.507878 | 1.4:+49557216 | MS.gene72324:CDS |
| GCGAACCCGTGGCGTGTTGG+TGG | 0.510127 | 1.4:-49556840 | None:intergenic |
| CTATCTCTTCTCATCATCAA+AGG | 0.510236 | 1.4:+49556912 | MS.gene72324:CDS |
| TTCAGCCTCCTCTGATTCGC+CGG | 0.511615 | 1.4:-49556654 | None:intergenic |
| ACCCGTGGCGTGTTGGTGGA+AGG | 0.512531 | 1.4:-49556836 | None:intergenic |
| GGAACAGAGAGAGTTGAGTT+GGG | 0.512955 | 1.4:-49556774 | None:intergenic |
| ACACCATGAAACTCAAAGTC+AGG | 0.514801 | 1.4:+49558644 | MS.gene72324:CDS |
| CTGTTCCGACGAACATCTCT+GGG | 0.515288 | 1.4:+49556790 | MS.gene72324:CDS |
| GAAGTGTCTTCAACATTAGC+AGG | 0.518876 | 1.4:-49558591 | None:intergenic |
| AAACGGAGAGCACCGGAACC+GGG | 0.519936 | 1.4:-49557047 | None:intergenic |
| TTAGCAGGCAAGTTGAGGTC+TGG | 0.520953 | 1.4:-49558576 | None:intergenic |
| GGAAATTGCTGAAGATTCCA+TGG | 0.523482 | 1.4:-49559264 | None:intergenic |
| GGCCTTCCACCAACACGCCA+CGG | 0.525496 | 1.4:+49556834 | MS.gene72324:CDS |
| TTTAAGCAACGAAGAGCGTA+AGG | 0.527688 | 1.4:+49558992 | MS.gene72324:CDS |
| ATACTCTATATCTGCAATGT+TGG | 0.528819 | 1.4:-49558793 | None:intergenic |
| TAATGATTCTGAACATTATG+TGG | 0.529661 | 1.4:+49558704 | MS.gene72324:CDS |
| CGTGTCGAGTGGCAAGGCGG+TGG | 0.531169 | 1.4:+49557192 | MS.gene72324:CDS |
| GTGTCATTAAACGTGTGGAA+AGG | 0.533046 | 1.4:+49559108 | MS.gene72324:CDS |
| TGATCGATCCGGTGAGTCAA+CGG | 0.533915 | 1.4:+49557161 | MS.gene72324:CDS |
| TATCTCTTCTCATCATCAAA+GGG | 0.536296 | 1.4:+49556913 | MS.gene72324:CDS |
| TTCACCGCCCGTTGACTCAC+CGG | 0.536619 | 1.4:-49557169 | None:intergenic |
| AACAGCGACGGCGACGGAGG+TGG | 0.537963 | 1.4:+49557273 | MS.gene72324:CDS |
| GCTTGCGGCGGAAGCGAGAG+CGG | 0.539353 | 1.4:-49556744 | None:intergenic |
| TTGGATTATGTCGTCGTGGA+CGG | 0.539717 | 1.4:-49556693 | None:intergenic |
| GCCTTCCACCAACACGCCAC+GGG | 0.543520 | 1.4:+49556835 | MS.gene72324:CDS |
| AGGCGGTGGAGGTGGTGCAG+CGG | 0.545534 | 1.4:+49557206 | MS.gene72324:CDS |
| TATGTTAAGAGGTGGTTCCA+TGG | 0.546217 | 1.4:-49558496 | None:intergenic |
| TCAGCCTCAACTCCTCCCCT+AGG | 0.546631 | 1.4:-49557129 | None:intergenic |
| TCTAGTAGGTCAACACGAAA+CGG | 0.548809 | 1.4:-49557064 | None:intergenic |
| ATGGCGAACCCGTGGCGTGT+TGG | 0.550542 | 1.4:-49556843 | None:intergenic |
| GCACCGGAACCGGGTGGTCA+CGG | 0.552377 | 1.4:-49557038 | None:intergenic |
| TTGCATTTCCGGCGAATCAG+AGG | 0.552766 | 1.4:+49556646 | MS.gene72324:CDS |
| CAACACGAAACGGAGAGCAC+CGG | 0.553484 | 1.4:-49557054 | None:intergenic |
| TTCAAATGCAGCAACTTCCA+AGG | 0.553957 | 1.4:+49559213 | MS.gene72324:CDS |
| CAACATTAGCAGGCAAGTTG+AGG | 0.555874 | 1.4:-49558581 | None:intergenic |
| GAAGAAAGAGCGGGAGCCAT+CGG | 0.558224 | 1.4:-49556882 | None:intergenic |
| GGAGAATATGGAGGTTAGAG+AGG | 0.560308 | 1.4:+49557324 | MS.gene72324:CDS |
| GTGTAGTGTGGTGGTGATGT+TGG | 0.561708 | 1.4:+49557300 | MS.gene72324:CDS |
| ATTCCATGGAAGGTGTTGAA+GGG | 0.563528 | 1.4:-49559250 | None:intergenic |
| GGCGTGTGAGTATGTGAGCT+TGG | 0.570856 | 1.4:-49556712 | None:intergenic |
| TTGGTGGTGATGAAAACCTA+GGG | 0.571174 | 1.4:+49557113 | MS.gene72324:CDS |
| GAGTTGGGAGCAGGTGCTTG+CGG | 0.574852 | 1.4:-49556759 | None:intergenic |
| CATTTCCGGCGAATCAGAGG+AGG | 0.576009 | 1.4:+49556649 | MS.gene72324:CDS |
| TAGTGTGGTGGTGATGTTGG+CGG | 0.576928 | 1.4:+49557303 | MS.gene72324:CDS |
| TTTAAATCTATGTTAAGAGG+TGG | 0.578621 | 1.4:-49558504 | None:intergenic |
| AAACTGAAACCGTGACCACC+CGG | 0.581030 | 1.4:+49557029 | MS.gene72324:CDS |
| AAAACCTAGGGGAGGAGTTG+AGG | 0.581253 | 1.4:+49557125 | MS.gene72324:CDS |
| GTCGTGGACGGCGGAGAATG+TGG | 0.582153 | 1.4:-49556681 | None:intergenic |
| AGAGTCTGCGAAGAAAGAGC+GGG | 0.584331 | 1.4:-49556891 | None:intergenic |
| CGGAGAAACAGCGACGGCGA+CGG | 0.589608 | 1.4:+49557267 | MS.gene72324:CDS |
| GGTGAACGTGTCGAGTGGCA+AGG | 0.590548 | 1.4:+49557186 | MS.gene72324:CDS |
| TTGGGAGCAGGTGCTTGCGG+CGG | 0.592620 | 1.4:-49556756 | None:intergenic |
| AGAAACAGCGACGGCGACGG+AGG | 0.596172 | 1.4:+49557270 | MS.gene72324:CDS |
| GGTGAAGTTGCTGTTTGCAA+CGG | 0.596822 | 1.4:+49557237 | MS.gene72324:CDS |
| TAGAGTCTGCGAAGAAAGAG+CGG | 0.597944 | 1.4:-49556892 | None:intergenic |
| TGTTAGTGTCATTAAACGTG+TGG | 0.598882 | 1.4:+49559103 | MS.gene72324:CDS |
| TTCCATGGAAGGTGTTGAAG+GGG | 0.598929 | 1.4:-49559249 | None:intergenic |
| AAAACACTAAACCCTTACAA+TGG | 0.599929 | 1.4:-49556994 | None:intergenic |
| GTTGCTGCATTTGAAGAGCT+GGG | 0.603734 | 1.4:-49559205 | None:intergenic |
| GAAGGAGTCCTTAATGCTGA+TGG | 0.607958 | 1.4:+49558858 | MS.gene72324:CDS |
| ATTGCTGAAGATTCCATGGA+AGG | 0.609117 | 1.4:-49559260 | None:intergenic |
| GTAATCTCAACGTTCTCCGA+TGG | 0.609849 | 1.4:+49556866 | MS.gene72324:CDS |
| TTATGTGGAAGAAAGTGAAG+AGG | 0.613832 | 1.4:+49558719 | MS.gene72324:CDS |
| GAAGTTGCTGTTTGCAACGG+TGG | 0.616823 | 1.4:+49557240 | MS.gene72324:CDS |
| CGGGCGGTGAACGTGTCGAG+TGG | 0.620160 | 1.4:+49557181 | MS.gene72324:CDS |
| GTTGGTGGTGATGAAAACCT+AGG | 0.622095 | 1.4:+49557112 | MS.gene72324:CDS |
| GATGTGATCAAATATCCAGT+TGG | 0.627239 | 1.4:+49557094 | MS.gene72324:CDS |
| CTGCAAAAGAAGATGAGCAA+CGG | 0.627727 | 1.4:-49559015 | None:intergenic |
| GATTATGTCGTCGTGGACGG+CGG | 0.638155 | 1.4:-49556690 | None:intergenic |
| CTTACAATGGAAAATATCAA+CGG | 0.639139 | 1.4:-49556981 | None:intergenic |
| GTGATCAAATATCCAGTTGG+TGG | 0.640023 | 1.4:+49557097 | MS.gene72324:CDS |
| GAGATTACATGGCGAACCCG+TGG | 0.640423 | 1.4:-49556851 | None:intergenic |
| TTGGTGTCATAAACTTCTTG+TGG | 0.645161 | 1.4:-49558774 | None:intergenic |
| TGTTGACCTACTAGATAACA+AGG | 0.646998 | 1.4:+49557072 | MS.gene72324:CDS |
| GTTTGCCCAGAGATGTTCGT+CGG | 0.658971 | 1.4:-49556795 | None:intergenic |
| TTATAGTAATCGTGATCACA+AGG | 0.659188 | 1.4:-49558540 | None:intergenic |
| GGAGGTGGCGTTGTGTAGTG+TGG | 0.663867 | 1.4:+49557288 | MS.gene72324:CDS |
| GATGTTGGCGGAGAATATGG+AGG | 0.668123 | 1.4:+49557315 | MS.gene72324:CDS |
| TGGTGATGAAAACCTAGGGG+AGG | 0.688286 | 1.4:+49557117 | MS.gene72324:CDS |
| CAAACGCATGCTATTCTACG+TGG | 0.694571 | 1.4:+49556813 | MS.gene72324:CDS |
| GGTGGCGTTGTGTAGTGTGG+TGG | 0.695299 | 1.4:+49557291 | MS.gene72324:CDS |
| CGATCCGGTGAGTCAACGGG+CGG | 0.698925 | 1.4:+49557165 | MS.gene72324:CDS |
| CGGAGAGCACCGGAACCGGG+TGG | 0.727565 | 1.4:-49557044 | None:intergenic |
| GAACGTGTCGAGTGGCAAGG+CGG | 0.733374 | 1.4:+49557189 | MS.gene72324:CDS |
| GAGCTTGGATTATGTCGTCG+TGG | 0.735444 | 1.4:-49556697 | None:intergenic |
| GGTTTACGGAGAAACAGCGA+CGG | 0.737765 | 1.4:+49557261 | MS.gene72324:CDS |
| GTTGATGAGAGTGAACCTGA+AGG | 0.755489 | 1.4:+49558840 | MS.gene72324:CDS |
| TGGTGGTGATGAAAACCTAG+GGG | 0.760068 | 1.4:+49557114 | MS.gene72324:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATATTAATCTACTT+AGG | - | chr1.4:49557696-49557715 | None:intergenic | 10.0% |
| !! | TATTCTTCATTAAAAATTAT+AGG | + | chr1.4:49558470-49558489 | MS.gene72324:intron | 10.0% |
| !! | CAAAAATTAGTTAATGTATA+TGG | + | chr1.4:49557748-49557767 | MS.gene72324:intron | 15.0% |
| !! | TATGATTTCAATTATTAGAA+GGG | - | chr1.4:49558118-49558137 | None:intergenic | 15.0% |
| !! | TTATGATTTCAATTATTAGA+AGG | - | chr1.4:49558119-49558138 | None:intergenic | 15.0% |
| !!! | AAACATAGTTATTGTAATTT+TGG | + | chr1.4:49557853-49557872 | MS.gene72324:intron | 15.0% |
| !!! | AACATAGTTATTGTAATTTT+GGG | + | chr1.4:49557854-49557873 | MS.gene72324:intron | 15.0% |
| !!! | AATTTTTGTTATCAATTGTT+AGG | + | chr1.4:49558913-49558932 | MS.gene72324:intron | 15.0% |
| !!! | ATACATTAACTAATTTTTGA+TGG | - | chr1.4:49557747-49557766 | None:intergenic | 15.0% |
| !! | AATAACCAAACAAATTGAAA+TGG | + | chr1.4:49557927-49557946 | MS.gene72324:intron | 20.0% |
| !! | ATGTTTAAATCTATGTTAAG+AGG | - | chr1.4:49558510-49558529 | None:intergenic | 20.0% |
| !!! | ACGAATTATTTTCAAATTTC+TGG | + | chr1.4:49558384-49558403 | MS.gene72324:intron | 20.0% |
| !!! | AGCTTCAAATTTGAAATTTT+GGG | - | chr1.4:49558347-49558366 | None:intergenic | 20.0% |
| !!! | ATTCGTAAAACTTTTAAGTT+TGG | - | chr1.4:49558370-49558389 | None:intergenic | 20.0% |
| !!! | TCTTTAATCTATTTCTACTA+TGG | + | chr1.4:49557788-49557807 | MS.gene72324:intron | 20.0% |
| ! | CAATATGCATTTCAATATGA+AGG | + | chr1.4:49558948-49558967 | MS.gene72324:intron | 25.0% |
| ! | CTTACAATGGAAAATATCAA+CGG | - | chr1.4:49556984-49557003 | None:intergenic | 25.0% |
| ! | TAATGATTCTGAACATTATG+TGG | + | chr1.4:49558704-49558723 | MS.gene72324:CDS | 25.0% |
| ! | TGGTTATTAGACAACAAAAA+AGG | - | chr1.4:49557915-49557934 | None:intergenic | 25.0% |
| ! | TTAAAAATTATAGGAAGCCA+TGG | + | chr1.4:49558479-49558498 | MS.gene72324:intron | 25.0% |
| ! | TTTAAATCCAAGTGTGAAAA+GGG | + | chr1.4:49559148-49559167 | MS.gene72324:CDS | 25.0% |
| ! | TTTAAATCTATGTTAAGAGG+TGG | - | chr1.4:49558507-49558526 | None:intergenic | 25.0% |
| !! | ATAGTTATTGTAATTTTGGG+TGG | + | chr1.4:49557857-49557876 | MS.gene72324:intron | 25.0% |
| !! | ATTTTGTGGACAGAAAAAAA+TGG | - | chr1.4:49558304-49558323 | None:intergenic | 25.0% |
| !! | GTTGATATTTTCCATTGTAA+GGG | + | chr1.4:49556983-49557002 | MS.gene72324:CDS | 25.0% |
| !! | TTTTTCTGTCCACAAAATTT+TGG | + | chr1.4:49558306-49558325 | MS.gene72324:intron | 25.0% |
| !!! | GAGCTTCAAATTTGAAATTT+TGG | - | chr1.4:49558348-49558367 | None:intergenic | 25.0% |
| !!! | TAGTAGTGGGTAATTAATAT+AGG | - | chr1.4:49558153-49558172 | None:intergenic | 25.0% |
| !!! | TTAATCTATTTCTACTATGG+AGG | + | chr1.4:49557791-49557810 | MS.gene72324:intron | 25.0% |
| AAAACACTAAACCCTTACAA+TGG | - | chr1.4:49556997-49557016 | None:intergenic | 30.0% | |
| AAGGGTCCTATAATAAAAGA+CGG | - | chr1.4:49558018-49558037 | None:intergenic | 30.0% | |
| AATTATTAGAAGGGCAAACA+TGG | - | chr1.4:49558109-49558128 | None:intergenic | 30.0% | |
| ATACATTACCATCAGCATTA+AGG | - | chr1.4:49558869-49558888 | None:intergenic | 30.0% | |
| ATACTCTATATCTGCAATGT+TGG | - | chr1.4:49558796-49558815 | None:intergenic | 30.0% | |
| ATTGATTGCGTCAATGTATT+CGG | + | chr1.4:49559076-49559095 | MS.gene72324:CDS | 30.0% | |
| CAATATGAAGGAACAGATAA+TGG | + | chr1.4:49558960-49558979 | MS.gene72324:intron | 30.0% | |
| CGTAAAGAAGAAGAAAGAAA+GGG | + | chr1.4:49557477-49557496 | MS.gene72324:intron | 30.0% | |
| GATTGAATGTAAACTTGGAA+AGG | + | chr1.4:49558242-49558261 | MS.gene72324:intron | 30.0% | |
| GCACCAAATTAATTTATCGT+TGG | + | chr1.4:49558183-49558202 | MS.gene72324:intron | 30.0% | |
| GCTCCTTGTTCTTAAAAAAA+AGG | - | chr1.4:49558412-49558431 | None:intergenic | 30.0% | |
| GGTCCAACGATAAATTAATT+TGG | - | chr1.4:49558189-49558208 | None:intergenic | 30.0% | |
| GTTTAAATCCAAGTGTGAAA+AGG | + | chr1.4:49559147-49559166 | MS.gene72324:CDS | 30.0% | |
| TATCTCTTCTCATCATCAAA+GGG | + | chr1.4:49556913-49556932 | MS.gene72324:CDS | 30.0% | |
| TCGTAAAGAAGAAGAAAGAA+AGG | + | chr1.4:49557476-49557495 | MS.gene72324:intron | 30.0% | |
| TGCATTATTCAAGTAGTAGT+GGG | - | chr1.4:49558166-49558185 | None:intergenic | 30.0% | |
| TTATAGTAATCGTGATCACA+AGG | - | chr1.4:49558543-49558562 | None:intergenic | 30.0% | |
| ! | ACTCACCATTTCAATTTGTT+TGG | - | chr1.4:49557935-49557954 | None:intergenic | 30.0% |
| ! | AGAGTGATTCCAAAATTTTG+TGG | - | chr1.4:49558318-49558337 | None:intergenic | 30.0% |
| ! | ATCTACTTAGGTTGTTATAG+TGG | - | chr1.4:49557684-49557703 | None:intergenic | 30.0% |
| ! | CGTTGATATTTTCCATTGTA+AGG | + | chr1.4:49556982-49557001 | MS.gene72324:CDS | 30.0% |
| !! | ATCTGTTTCTGAATTGTTTG+TGG | - | chr1.4:49558685-49558704 | None:intergenic | 30.0% |
| !! | TAGTTTGGTAATTTTGCGTA+AGG | + | chr1.4:49557396-49557415 | MS.gene72324:intron | 30.0% |
| !!! | AAACCCGTGTTTTTTCTAAA+AGG | - | chr1.4:49558037-49558056 | None:intergenic | 30.0% |
| !!! | AACCCGTGTTTTTTCTAAAA+GGG | - | chr1.4:49558036-49558055 | None:intergenic | 30.0% |
| !!! | ATTCCATTTTTTTTGTGCCA+TGG | - | chr1.4:49558268-49558287 | None:intergenic | 30.0% |
| AAAGAAGAAGAAAGAAAGGG+AGG | + | chr1.4:49557480-49557499 | MS.gene72324:intron | 35.0% | |
| AAAGGGAGGAAAGAAAGAAA+AGG | + | chr1.4:49557494-49557513 | MS.gene72324:intron | 35.0% | |
| AACGGCTGAGATTAAACTTA+GGG | - | chr1.4:49556966-49556985 | None:intergenic | 35.0% | |
| AACTCAAAGTCAGGAAATAG+AGG | + | chr1.4:49558653-49558672 | MS.gene72324:CDS | 35.0% | |
| AAGGGAGGAAAGAAAGAAAA+GGG | + | chr1.4:49557495-49557514 | MS.gene72324:intron | 35.0% | |
| ATGCAGGAAGACTGAAAAAA+GGG | + | chr1.4:49559045-49559064 | MS.gene72324:CDS | 35.0% | |
| CAAGTTTACATTCAATCCAG+AGG | - | chr1.4:49558239-49558258 | None:intergenic | 35.0% | |
| CGTGATCACAAGGATTAAAA+GGG | - | chr1.4:49558533-49558552 | None:intergenic | 35.0% | |
| CTATCTCTTCTCATCATCAA+AGG | + | chr1.4:49556912-49556931 | MS.gene72324:CDS | 35.0% | |
| CTCTGGATTGAATGTAAACT+TGG | + | chr1.4:49558237-49558256 | MS.gene72324:intron | 35.0% | |
| CTGAGATTAAACTTAGGGTT+CGG | - | chr1.4:49556961-49556980 | None:intergenic | 35.0% | |
| GATATGATGTGTTTGCTTAC+CGG | + | chr1.4:49557532-49557551 | MS.gene72324:intron | 35.0% | |
| GATGTGATCAAATATCCAGT+TGG | + | chr1.4:49557094-49557113 | MS.gene72324:CDS | 35.0% | |
| GTGCATTATTCAAGTAGTAG+TGG | - | chr1.4:49558167-49558186 | None:intergenic | 35.0% | |
| GTGGACAGAAAAAAATGGAA+TGG | - | chr1.4:49558299-49558318 | None:intergenic | 35.0% | |
| TCGTGATCACAAGGATTAAA+AGG | - | chr1.4:49558534-49558553 | None:intergenic | 35.0% | |
| TGTCATAAACTTCTTGTGGT+TGG | - | chr1.4:49558773-49558792 | None:intergenic | 35.0% | |
| TGTCATTAAACGTGTGGAAA+GGG | + | chr1.4:49559109-49559128 | MS.gene72324:CDS | 35.0% | |
| TGTTGACCTACTAGATAACA+AGG | + | chr1.4:49557072-49557091 | MS.gene72324:CDS | 35.0% | |
| TTATGTGGAAGAAAGTGAAG+AGG | + | chr1.4:49558719-49558738 | MS.gene72324:CDS | 35.0% | |
| ! | AAAGAAAGAAAAGGGCACAA+AGG | + | chr1.4:49557503-49557522 | MS.gene72324:intron | 35.0% |
| ! | CAAATCAAAGAGTGCAATGA+AGG | - | chr1.4:49557572-49557591 | None:intergenic | 35.0% |
| ! | CACGCTTCCTTTTCAATTAT+GGG | - | chr1.4:49558210-49558229 | None:intergenic | 35.0% |
| ! | CTACCTCCGTCTTTTATTAT+AGG | + | chr1.4:49558009-49558028 | MS.gene72324:intron | 35.0% |
| ! | TCACATCCTTGTTATCTAGT+AGG | - | chr1.4:49557081-49557100 | None:intergenic | 35.0% |
| ! | TCACGCTTCCTTTTCAATTA+TGG | - | chr1.4:49558211-49558230 | None:intergenic | 35.0% |
| ! | TGTTAGTGTCATTAAACGTG+TGG | + | chr1.4:49559103-49559122 | MS.gene72324:CDS | 35.0% |
| ! | TTTCCTGACTTTGAGTTTCA+TGG | - | chr1.4:49558650-49558669 | None:intergenic | 35.0% |
| !! | GACCCTTTTAGAAAAAACAC+GGG | + | chr1.4:49558031-49558050 | MS.gene72324:intron | 35.0% |
| !! | GGACCCTTTTAGAAAAAACA+CGG | + | chr1.4:49558030-49558049 | MS.gene72324:intron | 35.0% |
| !! | TTGGTGTCATAAACTTCTTG+TGG | - | chr1.4:49558777-49558796 | None:intergenic | 35.0% |
| !!! | GCGCCTTTTTTTTAAGAACA+AGG | + | chr1.4:49558406-49558425 | MS.gene72324:intron | 35.0% |
| ACACCATGAAACTCAAAGTC+AGG | + | chr1.4:49558644-49558663 | MS.gene72324:CDS | 40.0% | |
| AGGCCATGGCACAAAAAAAA+TGG | + | chr1.4:49558262-49558281 | MS.gene72324:intron | 40.0% | |
| ATGGAAAACACGTGAATGGA+AGG | + | chr1.4:49557371-49557390 | MS.gene72324:intron | 40.0% | |
| ATGGATGGAAAACACGTGAA+TGG | + | chr1.4:49557367-49557386 | MS.gene72324:intron | 40.0% | |
| ATGTAAACTTGGAAAGGCCA+TGG | + | chr1.4:49558248-49558267 | MS.gene72324:intron | 40.0% | |
| ATTGCTGAAGATTCCATGGA+AGG | - | chr1.4:49559263-49559282 | None:intergenic | 40.0% | |
| CAACGGCTGAGATTAAACTT+AGG | - | chr1.4:49556967-49556986 | None:intergenic | 40.0% | |
| CATGCAGGAAGACTGAAAAA+AGG | + | chr1.4:49559044-49559063 | MS.gene72324:CDS | 40.0% | |
| CGTTGGACCCATAATTGAAA+AGG | + | chr1.4:49558200-49558219 | MS.gene72324:intron | 40.0% | |
| CTGCAAAAGAAGATGAGCAA+CGG | - | chr1.4:49559018-49559037 | None:intergenic | 40.0% | |
| GGAAATTGCTGAAGATTCCA+TGG | - | chr1.4:49559267-49559286 | None:intergenic | 40.0% | |
| GGGACAATCTTCAATGTTGT+TGG | + | chr1.4:49559129-49559148 | MS.gene72324:CDS | 40.0% | |
| GGTCCTATAATAAAAGACGG+AGG | - | chr1.4:49558015-49558034 | None:intergenic | 40.0% | |
| GTGATCAAATATCCAGTTGG+TGG | + | chr1.4:49557097-49557116 | MS.gene72324:CDS | 40.0% | |
| TATGTTAAGAGGTGGTTCCA+TGG | - | chr1.4:49558499-49558518 | None:intergenic | 40.0% | |
| TCTAGTAGGTCAACACGAAA+CGG | - | chr1.4:49557067-49557086 | None:intergenic | 40.0% | |
| TGGAAAACACGTGAATGGAA+GGG | + | chr1.4:49557372-49557391 | MS.gene72324:intron | 40.0% | |
| TTCAAATGCAGCAACTTCCA+AGG | + | chr1.4:49559213-49559232 | MS.gene72324:CDS | 40.0% | |
| ! | AGATTGTCCCTTTTCACACT+TGG | - | chr1.4:49559158-49559177 | None:intergenic | 40.0% |
| ! | GAAGTGTCTTCAACATTAGC+AGG | - | chr1.4:49558594-49558613 | None:intergenic | 40.0% |
| ! | GTGTCATTAAACGTGTGGAA+AGG | + | chr1.4:49559108-49559127 | MS.gene72324:CDS | 40.0% |
| ! | TAGTTTGCAAGTGGAGGATA+TGG | + | chr1.4:49557348-49557367 | MS.gene72324:intron | 40.0% |
| ! | TTTAAGCAACGAAGAGCGTA+AGG | + | chr1.4:49558992-49559011 | MS.gene72324:CDS | 40.0% |
| !! | ATTCCATGGAAGGTGTTGAA+GGG | - | chr1.4:49559253-49559272 | None:intergenic | 40.0% |
| !! | TAGAGAGGTTAGTTTGCAAG+TGG | + | chr1.4:49557339-49557358 | MS.gene72324:intron | 40.0% |
| !! | TTGGTGGTGATGAAAACCTA+GGG | + | chr1.4:49557113-49557132 | MS.gene72324:CDS | 40.0% |
| !!! | CTTTTTTCAGTCTTCCTGCA+TGG | - | chr1.4:49559046-49559065 | None:intergenic | 40.0% |
| AGGAGAAGATGGAAGGGAAT+CGG | + | chr1.4:49557430-49557449 | MS.gene72324:intron | 45.0% | |
| AGTTGCTGCATTTGAAGAGC+TGG | - | chr1.4:49559209-49559228 | None:intergenic | 45.0% | |
| CAAACGCATGCTATTCTACG+TGG | + | chr1.4:49556813-49556832 | MS.gene72324:CDS | 45.0% | |
| CAACATTAGCAGGCAAGTTG+AGG | - | chr1.4:49558584-49558603 | None:intergenic | 45.0% | |
| CGGAGAACGTTGAGATTACA+TGG | - | chr1.4:49556865-49556884 | None:intergenic | 45.0% | |
| CGGGGAAGAAGAAGGTTATA+TGG | + | chr1.4:49557450-49557469 | MS.gene72324:intron | 45.0% | |
| CGTGAATGGAAGGGATAGTT+TGG | + | chr1.4:49557381-49557400 | MS.gene72324:intron | 45.0% | |
| CTGTTTGCAACGGTGGTTTA+CGG | + | chr1.4:49557247-49557266 | MS.gene72324:CDS | 45.0% | |
| GAAGGAGTCCTTAATGCTGA+TGG | + | chr1.4:49558858-49558877 | MS.gene72324:CDS | 45.0% | |
| GAAGGTAGGAGAAGATGGAA+GGG | + | chr1.4:49557424-49557443 | MS.gene72324:intron | 45.0% | |
| GGAACAGAGAGAGTTGAGTT+GGG | - | chr1.4:49556777-49556796 | None:intergenic | 45.0% | |
| GGAGAATATGGAGGTTAGAG+AGG | + | chr1.4:49557324-49557343 | MS.gene72324:CDS | 45.0% | |
| GTAATCTCAACGTTCTCCGA+TGG | + | chr1.4:49556866-49556885 | MS.gene72324:CDS | 45.0% | |
| GTTGCTGCATTTGAAGAGCT+GGG | - | chr1.4:49559208-49559227 | None:intergenic | 45.0% | |
| TAGAGTCTGCGAAGAAAGAG+CGG | - | chr1.4:49556895-49556914 | None:intergenic | 45.0% | |
| TCAGCATTAAGGACTCCTTC+AGG | - | chr1.4:49558858-49558877 | None:intergenic | 45.0% | |
| TTGCAAGTGGAGGATATGGA+TGG | + | chr1.4:49557352-49557371 | MS.gene72324:intron | 45.0% | |
| TTGGATTATGTCGTCGTGGA+CGG | - | chr1.4:49556696-49556715 | None:intergenic | 45.0% | |
| ! | AGGTTTTCATCACCACCAAC+TGG | - | chr1.4:49557112-49557131 | None:intergenic | 45.0% |
| ! | GAAAAGGGCACAAAGGAGAT+TGG | + | chr1.4:49557510-49557529 | MS.gene72324:intron | 45.0% |
| ! | GGTAATTTTGCGTAAGGCGT+TGG | + | chr1.4:49557402-49557421 | MS.gene72324:intron | 45.0% |
| ! | GTTGATGAGAGTGAACCTGA+AGG | + | chr1.4:49558840-49558859 | MS.gene72324:CDS | 45.0% |
| ! | TGGTGGTGATGAAAACCTAG+GGG | + | chr1.4:49557114-49557133 | MS.gene72324:CDS | 45.0% |
| !! | AGAGGTTAGTTTGCAAGTGG+AGG | + | chr1.4:49557342-49557361 | MS.gene72324:intron | 45.0% |
| !! | GAGCTGGATTTTGATCGATC+CGG | + | chr1.4:49557150-49557169 | MS.gene72324:CDS | 45.0% |
| !! | GATTCCATGGAAGGTGTTGA+AGG | - | chr1.4:49559254-49559273 | None:intergenic | 45.0% |
| !! | GGTGAAGTTGCTGTTTGCAA+CGG | + | chr1.4:49557237-49557256 | MS.gene72324:CDS | 45.0% |
| !! | GTTGGTGGTGATGAAAACCT+AGG | + | chr1.4:49557112-49557131 | MS.gene72324:CDS | 45.0% |
| !! | TTCCATGGAAGGTGTTGAAG+GGG | - | chr1.4:49559252-49559271 | None:intergenic | 45.0% |
| !!! | ATTTTGCGTAAGGCGTTGGA+AGG | + | chr1.4:49557406-49557425 | MS.gene72324:intron | 45.0% |
| !!! | TTGTTATTTATAAATAAAAA+TGG | + | chr1.4:49557720-49557739 | MS.gene72324:intron | 5.0% |
| AAAACCTAGGGGAGGAGTTG+AGG | + | chr1.4:49557125-49557144 | MS.gene72324:CDS | 50.0% | |
| AAACTGAAACCGTGACCACC+CGG | + | chr1.4:49557029-49557048 | MS.gene72324:CDS | 50.0% | |
| AAGGGAATCGGGGAAGAAGA+AGG | + | chr1.4:49557442-49557461 | MS.gene72324:intron | 50.0% | |
| AGAGTCTGCGAAGAAAGAGC+GGG | - | chr1.4:49556894-49556913 | None:intergenic | 50.0% | |
| CACATACTCACACGCCTTGA+CGG | + | chr1.4:49556719-49556738 | MS.gene72324:CDS | 50.0% | |
| CGGAACAGAGAGAGTTGAGT+TGG | - | chr1.4:49556778-49556797 | None:intergenic | 50.0% | |
| CGTTGGAAGGTAGGAGAAGA+TGG | + | chr1.4:49557419-49557438 | MS.gene72324:intron | 50.0% | |
| CTGTTCCGACGAACATCTCT+GGG | + | chr1.4:49556790-49556809 | MS.gene72324:CDS | 50.0% | |
| GAGAAGATGGAAGGGAATCG+GGG | + | chr1.4:49557432-49557451 | MS.gene72324:intron | 50.0% | |
| GAGCTTGGATTATGTCGTCG+TGG | - | chr1.4:49556700-49556719 | None:intergenic | 50.0% | |
| GAGTGCAATGAAGGTCAACG+AGG | - | chr1.4:49557563-49557582 | None:intergenic | 50.0% | |
| GATGTTGGCGGAGAATATGG+AGG | + | chr1.4:49557315-49557334 | MS.gene72324:CDS | 50.0% | |
| GGAAGGTAGGAGAAGATGGA+AGG | + | chr1.4:49557423-49557442 | MS.gene72324:intron | 50.0% | |
| GGAGAAGATGGAAGGGAATC+GGG | + | chr1.4:49557431-49557450 | MS.gene72324:intron | 50.0% | |
| GGGGAGATTTGAGGATTCCT+TGG | - | chr1.4:49559233-49559252 | None:intergenic | 50.0% | |
| GGTGATGTTGGCGGAGAATA+TGG | + | chr1.4:49557312-49557331 | MS.gene72324:CDS | 50.0% | |
| GGTTTACGGAGAAACAGCGA+CGG | + | chr1.4:49557261-49557280 | MS.gene72324:CDS | 50.0% | |
| GTTTGCCCAGAGATGTTCGT+CGG | - | chr1.4:49556798-49556817 | None:intergenic | 50.0% | |
| TCTGTTCCGACGAACATCTC+TGG | + | chr1.4:49556789-49556808 | MS.gene72324:CDS | 50.0% | |
| TGATCGATCCGGTGAGTCAA+CGG | + | chr1.4:49557161-49557180 | MS.gene72324:CDS | 50.0% | |
| TTGCATTTCCGGCGAATCAG+AGG | + | chr1.4:49556646-49556665 | MS.gene72324:CDS | 50.0% | |
| ! | AGGAAGCGTGAATGTACCTC+TGG | + | chr1.4:49558220-49558239 | MS.gene72324:intron | 50.0% |
| ! | GGTGTTGAAGGGGAGATTTG+AGG | - | chr1.4:49559242-49559261 | None:intergenic | 50.0% |
| ! | GTGTAGTGTGGTGGTGATGT+TGG | + | chr1.4:49557300-49557319 | MS.gene72324:CDS | 50.0% |
| ! | TAGTGTGGTGGTGATGTTGG+CGG | + | chr1.4:49557303-49557322 | MS.gene72324:CDS | 50.0% |
| ! | TGGTGATGAAAACCTAGGGG+AGG | + | chr1.4:49557117-49557136 | MS.gene72324:CDS | 50.0% |
| ! | TTAGCAGGCAAGTTGAGGTC+TGG | - | chr1.4:49558579-49558598 | None:intergenic | 50.0% |
| !! | GAAGTTGCTGTTTGCAACGG+TGG | + | chr1.4:49557240-49557259 | MS.gene72324:CDS | 50.0% |
| CATTTCCGGCGAATCAGAGG+AGG | + | chr1.4:49556649-49556668 | MS.gene72324:CDS | 55.0% | |
| CTCCCCTTCAACACCTTCCA+TGG | + | chr1.4:49559247-49559266 | MS.gene72324:CDS | 55.0% | |
| GAAGAAAGAGCGGGAGCCAT+CGG | - | chr1.4:49556885-49556904 | None:intergenic | 55.0% | |
| GAAGGTCAACGAGGCTAGAC+CGG | - | chr1.4:49557554-49557573 | None:intergenic | 55.0% | |
| GAGATTACATGGCGAACCCG+TGG | - | chr1.4:49556854-49556873 | None:intergenic | 55.0% | |
| GATCGATCCGGTGAGTCAAC+GGG | + | chr1.4:49557162-49557181 | MS.gene72324:CDS | 55.0% | |
| GATTATGTCGTCGTGGACGG+CGG | - | chr1.4:49556693-49556712 | None:intergenic | 55.0% | |
| GGCGTGTGAGTATGTGAGCT+TGG | - | chr1.4:49556715-49556734 | None:intergenic | 55.0% | |
| ! | CAACACGAAACGGAGAGCAC+CGG | - | chr1.4:49557057-49557076 | None:intergenic | 55.0% |
| ! | CTTTTGCAGCACAGCCATGC+AGG | + | chr1.4:49559029-49559048 | MS.gene72324:CDS | 55.0% |
| ! | TTCAGCCTCCTCTGATTCGC+CGG | - | chr1.4:49556657-49556676 | None:intergenic | 55.0% |
| !! | GAGAGAGTTGAGTTGGGAGC+AGG | - | chr1.4:49556771-49556790 | None:intergenic | 55.0% |
| !! | TGCGTAAGGCGTTGGAAGGT+AGG | + | chr1.4:49557410-49557429 | MS.gene72324:intron | 55.0% |
| AAACCGTGACCACCCGGTTC+CGG | + | chr1.4:49557035-49557054 | MS.gene72324:CDS | 60.0% | |
| GAACGTGTCGAGTGGCAAGG+CGG | + | chr1.4:49557189-49557208 | MS.gene72324:CDS | 60.0% | |
| GAGTTGGGAGCAGGTGCTTG+CGG | - | chr1.4:49556762-49556781 | None:intergenic | 60.0% | |
| GGAGGTGGCGTTGTGTAGTG+TGG | + | chr1.4:49557288-49557307 | MS.gene72324:CDS | 60.0% | |
| GGTGAACGTGTCGAGTGGCA+AGG | + | chr1.4:49557186-49557205 | MS.gene72324:CDS | 60.0% | |
| GGTGGCGTTGTGTAGTGTGG+TGG | + | chr1.4:49557291-49557310 | MS.gene72324:CDS | 60.0% | |
| TCAGCCTCAACTCCTCCCCT+AGG | - | chr1.4:49557132-49557151 | None:intergenic | 60.0% | |
| !! | AAACGGAGAGCACCGGAACC+GGG | - | chr1.4:49557050-49557069 | None:intergenic | 60.0% |
| !! | GAAACGGAGAGCACCGGAAC+CGG | - | chr1.4:49557051-49557070 | None:intergenic | 60.0% |
| !! | TTCACCGCCCGTTGACTCAC+CGG | - | chr1.4:49557172-49557191 | None:intergenic | 60.0% |
| AGAAACAGCGACGGCGACGG+AGG | + | chr1.4:49557270-49557289 | MS.gene72324:CDS | 65.0% | |
| ATGGCGAACCCGTGGCGTGT+TGG | - | chr1.4:49556846-49556865 | None:intergenic | 65.0% | |
| CGATCCGGTGAGTCAACGGG+CGG | + | chr1.4:49557165-49557184 | MS.gene72324:CDS | 65.0% | |
| CGGAGAAACAGCGACGGCGA+CGG | + | chr1.4:49557267-49557286 | MS.gene72324:CDS | 65.0% | |
| GCCTTCCACCAACACGCCAC+GGG | + | chr1.4:49556835-49556854 | MS.gene72324:CDS | 65.0% | |
| GGCCTTCCACCAACACGCCA+CGG | + | chr1.4:49556834-49556853 | MS.gene72324:CDS | 65.0% | |
| GGGAGGAGTTGAGGCTGAGC+TGG | + | chr1.4:49557134-49557153 | MS.gene72324:CDS | 65.0% | |
| GTCGTGGACGGCGGAGAATG+TGG | - | chr1.4:49556684-49556703 | None:intergenic | 65.0% | |
| TGGAGGTGGTGCAGCGGAGT+GGG | + | chr1.4:49557212-49557231 | MS.gene72324:CDS | 65.0% | |
| TTGGGAGCAGGTGCTTGCGG+CGG | - | chr1.4:49556759-49556778 | None:intergenic | 65.0% | |
| ! | ACCCGTGGCGTGTTGGTGGA+AGG | - | chr1.4:49556839-49556858 | None:intergenic | 65.0% |
| AACAGCGACGGCGACGGAGG+TGG | + | chr1.4:49557273-49557292 | MS.gene72324:CDS | 70.0% | |
| AAGCGAGAGCGGCGCCGTCA+AGG | - | chr1.4:49556736-49556755 | None:intergenic | 70.0% | |
| AGGCGGTGGAGGTGGTGCAG+CGG | + | chr1.4:49557206-49557225 | MS.gene72324:CDS | 70.0% | |
| CGGGCGGTGAACGTGTCGAG+TGG | + | chr1.4:49557181-49557200 | MS.gene72324:CDS | 70.0% | |
| CGTGTCGAGTGGCAAGGCGG+TGG | + | chr1.4:49557192-49557211 | MS.gene72324:CDS | 70.0% | |
| GAGTGGCAAGGCGGTGGAGG+TGG | + | chr1.4:49557198-49557217 | MS.gene72324:CDS | 70.0% | |
| GCACCGGAACCGGGTGGTCA+CGG | - | chr1.4:49557041-49557060 | None:intergenic | 70.0% | |
| GCGAACCCGTGGCGTGTTGG+TGG | - | chr1.4:49556843-49556862 | None:intergenic | 70.0% | |
| GCTTGCGGCGGAAGCGAGAG+CGG | - | chr1.4:49556747-49556766 | None:intergenic | 70.0% | |
| GGAGGTGGTGCAGCGGAGTG+GGG | + | chr1.4:49557213-49557232 | MS.gene72324:CDS | 70.0% | |
| GTCGAGTGGCAAGGCGGTGG+AGG | + | chr1.4:49557195-49557214 | MS.gene72324:CDS | 70.0% | |
| GTGGAGGTGGTGCAGCGGAG+TGG | + | chr1.4:49557211-49557230 | MS.gene72324:CDS | 70.0% | |
| GGTGGTGCAGCGGAGTGGGG+AGG | + | chr1.4:49557216-49557235 | MS.gene72324:CDS | 75.0% | |
| !! | CGGAGAGCACCGGAACCGGG+TGG | - | chr1.4:49557047-49557066 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 49556641 | 49559295 | 49556641 | ID=MS.gene72324 |
| chr1.4 | mRNA | 49556641 | 49559295 | 49556641 | ID=MS.gene72324.t1;Parent=MS.gene72324 |
| chr1.4 | exon | 49556641 | 49557345 | 49556641 | ID=MS.gene72324.t1.exon1;Parent=MS.gene72324.t1 |
| chr1.4 | CDS | 49556641 | 49557345 | 49556641 | ID=cds.MS.gene72324.t1;Parent=MS.gene72324.t1 |
| chr1.4 | exon | 49558492 | 49558879 | 49558492 | ID=MS.gene72324.t1.exon2;Parent=MS.gene72324.t1 |
| chr1.4 | CDS | 49558492 | 49558879 | 49558492 | ID=cds.MS.gene72324.t1;Parent=MS.gene72324.t1 |
| chr1.4 | exon | 49558970 | 49559295 | 49558970 | ID=MS.gene72324.t1.exon3;Parent=MS.gene72324.t1 |
| chr1.4 | CDS | 49558970 | 49559295 | 49558970 | ID=cds.MS.gene72324.t1;Parent=MS.gene72324.t1 |
| Gene Sequence |
| Protein sequence |
