Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72371.t1 | KEH31609.1 | 98.4 | 553 | 9 | 0 | 1 | 553 | 1 | 553 | 4.6e-310 | 1073.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72371.t1 | Q9SQZ0 | 51.2 | 551 | 243 | 6 | 6 | 537 | 40 | 583 | 4.8e-150 | 532.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72371.t1 | A0A072UP38 | 98.4 | 553 | 9 | 0 | 1 | 553 | 1 | 553 | 3.3e-310 | 1073.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052129 | MS.gene72371 | 0.833061 | 6.62E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene72371 | 0.816856 | 4.46E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72371.t1 | MTR_4g099270 | 98.195 | 554 | 10 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1113 |
| MS.gene72371.t1 | MTR_4g099270 | 97.964 | 442 | 9 | 0 | 113 | 554 | 1 | 442 | 0.0 | 887 |
| MS.gene72371.t1 | MTR_4g099270 | 98.615 | 361 | 5 | 0 | 1 | 361 | 22 | 382 | 0.0 | 728 |
| MS.gene72371.t1 | MTR_4g099270 | 98.258 | 287 | 5 | 0 | 1 | 287 | 22 | 308 | 0.0 | 582 |
| MS.gene72371.t1 | MTR_1g111740 | 50.449 | 557 | 253 | 6 | 6 | 552 | 34 | 577 | 0.0 | 550 |
| MS.gene72371.t1 | MTR_1g030660 | 42.669 | 532 | 285 | 6 | 8 | 530 | 53 | 573 | 9.96e-142 | 422 |
| MS.gene72371.t1 | MTR_2g035430 | 41.399 | 529 | 297 | 5 | 10 | 534 | 60 | 579 | 7.65e-141 | 420 |
| MS.gene72371.t1 | MTR_8g089320 | 40.824 | 534 | 301 | 6 | 1 | 529 | 51 | 574 | 9.03e-133 | 400 |
| MS.gene72371.t1 | MTR_8g089360 | 39.746 | 551 | 305 | 8 | 10 | 550 | 48 | 581 | 2.48e-132 | 398 |
| MS.gene72371.t1 | MTR_8g089360 | 39.746 | 551 | 305 | 8 | 10 | 550 | 65 | 598 | 3.30e-132 | 398 |
| MS.gene72371.t1 | MTR_8g461380 | 36.641 | 524 | 319 | 4 | 6 | 526 | 63 | 576 | 3.38e-110 | 341 |
| MS.gene72371.t1 | MTR_8g089340 | 39.220 | 436 | 249 | 6 | 100 | 529 | 2 | 427 | 3.06e-87 | 277 |
| MS.gene72371.t1 | MTR_7g086510 | 37.745 | 408 | 251 | 1 | 9 | 413 | 25 | 432 | 2.98e-73 | 246 |
| MS.gene72371.t1 | MTR_7g086610 | 35.222 | 406 | 260 | 1 | 5 | 407 | 15 | 420 | 3.51e-72 | 242 |
| MS.gene72371.t1 | MTR_6g027680 | 33.661 | 407 | 258 | 4 | 12 | 413 | 36 | 435 | 3.60e-68 | 231 |
| MS.gene72371.t1 | MTR_6g027630 | 33.415 | 407 | 259 | 4 | 12 | 413 | 33 | 432 | 7.65e-67 | 227 |
| MS.gene72371.t1 | MTR_6g027660 | 34.091 | 396 | 252 | 4 | 12 | 401 | 34 | 426 | 1.99e-66 | 227 |
| MS.gene72371.t1 | MTR_6g027630 | 33.415 | 407 | 259 | 4 | 12 | 413 | 33 | 432 | 2.21e-66 | 227 |
| MS.gene72371.t1 | MTR_6g027650 | 31.618 | 408 | 265 | 5 | 9 | 410 | 23 | 422 | 3.79e-64 | 221 |
| MS.gene72371.t1 | MTR_7g007850 | 31.589 | 535 | 337 | 15 | 6 | 526 | 35 | 554 | 5.28e-64 | 219 |
| MS.gene72371.t1 | MTR_7g007850 | 30.605 | 562 | 337 | 17 | 6 | 526 | 35 | 584 | 4.87e-62 | 214 |
| MS.gene72371.t1 | MTR_7g007850 | 36.049 | 405 | 238 | 13 | 6 | 400 | 35 | 428 | 2.10e-59 | 205 |
| MS.gene72371.t1 | MTR_7g007850 | 36.049 | 405 | 238 | 13 | 6 | 400 | 35 | 428 | 3.24e-59 | 206 |
| MS.gene72371.t1 | MTR_6g027630 | 33.051 | 354 | 225 | 4 | 65 | 413 | 1 | 347 | 2.93e-53 | 189 |
| MS.gene72371.t1 | MTR_6g034535 | 33.761 | 234 | 138 | 4 | 315 | 537 | 89 | 316 | 6.00e-31 | 123 |
| MS.gene72371.t1 | MTR_8g089342 | 48.315 | 89 | 46 | 0 | 1 | 89 | 52 | 140 | 2.25e-23 | 96.7 |
| MS.gene72371.t1 | MTR_6g027670 | 32.164 | 171 | 111 | 1 | 243 | 413 | 1 | 166 | 1.02e-21 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72371.t1 | AT5G04770 | 52.886 | 537 | 235 | 6 | 6 | 531 | 41 | 570 | 0.0 | 554 |
| MS.gene72371.t1 | AT3G10600 | 51.277 | 548 | 241 | 6 | 9 | 537 | 43 | 583 | 0.0 | 533 |
| MS.gene72371.t1 | AT4G21120 | 42.802 | 521 | 286 | 4 | 9 | 526 | 57 | 568 | 1.10e-152 | 450 |
| MS.gene72371.t1 | AT3G10600 | 49.324 | 444 | 199 | 6 | 113 | 537 | 1 | 437 | 1.53e-144 | 424 |
| MS.gene72371.t1 | AT5G04770 | 51.163 | 430 | 192 | 6 | 113 | 531 | 1 | 423 | 2.63e-141 | 416 |
| MS.gene72371.t1 | AT5G04770 | 55.108 | 372 | 159 | 3 | 6 | 370 | 41 | 411 | 5.64e-140 | 411 |
| MS.gene72371.t1 | AT2G34960 | 38.806 | 536 | 307 | 7 | 8 | 539 | 50 | 568 | 8.40e-128 | 386 |
| MS.gene72371.t1 | AT1G17120 | 40.344 | 523 | 287 | 6 | 10 | 523 | 69 | 575 | 1.40e-118 | 363 |
| MS.gene72371.t1 | AT4G21120 | 40.749 | 427 | 241 | 4 | 103 | 526 | 1 | 418 | 1.22e-110 | 337 |
| MS.gene72371.t1 | AT3G03720 | 36.224 | 392 | 245 | 3 | 14 | 401 | 16 | 406 | 1.02e-74 | 248 |
| MS.gene72371.t1 | AT5G36940 | 35.606 | 396 | 252 | 1 | 21 | 413 | 28 | 423 | 5.09e-70 | 236 |
| MS.gene72371.t1 | AT1G58030 | 34.430 | 395 | 256 | 1 | 16 | 407 | 34 | 428 | 5.46e-70 | 237 |
| MS.gene72371.t1 | AT1G05940 | 31.227 | 538 | 334 | 9 | 7 | 525 | 33 | 553 | 1.85e-65 | 223 |
| MS.gene72371.t1 | AT1G05940 | 35.000 | 400 | 248 | 5 | 7 | 399 | 33 | 427 | 1.41e-61 | 211 |
| MS.gene72371.t1 | AT1G05940 | 35.000 | 400 | 248 | 5 | 7 | 399 | 33 | 427 | 2.73e-61 | 211 |
| MS.gene72371.t1 | AT1G05940 | 28.475 | 446 | 285 | 7 | 98 | 525 | 6 | 435 | 1.61e-40 | 152 |
Find 137 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTCACTTGGTTGAATTCT+TGG | 0.073222 | 8.3:-21381138 | None:intergenic |
| AGCCGAGGAGATTGAGAATT+TGG | 0.146226 | 8.3:+21384942 | MS.gene72371:CDS |
| GGAGAATTCTTGGGATATTT+TGG | 0.185427 | 8.3:+21381628 | MS.gene72371:intron |
| TCACTCTTTGCTTGTGTCAT+AGG | 0.192722 | 8.3:+21381830 | MS.gene72371:CDS |
| AAGTTGGTTACACTCAAATT+TGG | 0.199523 | 8.3:-21384985 | None:intergenic |
| CTGTTTGAATTTCCAAACTA+TGG | 0.229022 | 8.3:-21384650 | None:intergenic |
| TCAATGGCTTTCCTTAATAT+TGG | 0.256994 | 8.3:+21384059 | MS.gene72371:CDS |
| CCCAACTCCAACCAATATTA+AGG | 0.269543 | 8.3:-21384070 | None:intergenic |
| CCTTATGCTTCTCCATAGTT+TGG | 0.287271 | 8.3:+21384638 | MS.gene72371:CDS |
| CCATAAGGAGCTATCCCTTT+TGG | 0.287938 | 8.3:-21382430 | None:intergenic |
| AACTTTACTTTATTGCCTAA+TGG | 0.315376 | 8.3:+21382591 | MS.gene72371:CDS |
| TCCTTAATATTGGTTGGAGT+TGG | 0.318656 | 8.3:+21384069 | MS.gene72371:CDS |
| TCTCTTCTAGTTGCAATGTT+AGG | 0.325505 | 8.3:+21384137 | MS.gene72371:CDS |
| ACATGAAAAGGAAACTTAAT+TGG | 0.331326 | 8.3:+21381176 | MS.gene72371:CDS |
| TCCCATGACACAAAGGTATC+TGG | 0.331917 | 8.3:-21384165 | None:intergenic |
| CTTTCCAACGCTTTGCTATA+TGG | 0.333799 | 8.3:+21384866 | MS.gene72371:CDS |
| TTATGATGCAGGAGAATTCT+TGG | 0.344760 | 8.3:+21381618 | MS.gene72371:intron |
| ATAGTGTACTTTAGTTATAT+AGG | 0.350941 | 8.3:+21382481 | MS.gene72371:CDS |
| GCAGTTCAAGTTCCAGTTGC+TGG | 0.352519 | 8.3:+21381358 | MS.gene72371:CDS |
| GTTGGAGCAGGTGCAAGTTT+AGG | 0.353177 | 8.3:+21384104 | MS.gene72371:CDS |
| CCAATAGGTAGGCTCTTATA+AGG | 0.355464 | 8.3:-21382544 | None:intergenic |
| CATGATGGTTCCTTACAATA+AGG | 0.362306 | 8.3:+21382627 | MS.gene72371:CDS |
| TGTCATAATGAGGTTCAATA+TGG | 0.363868 | 8.3:-21382332 | None:intergenic |
| TCCAACATGTTATAATCCTT+TGG | 0.364236 | 8.3:-21381778 | None:intergenic |
| CTTCAGCTAACTAACGCATT+TGG | 0.368274 | 8.3:-21385026 | None:intergenic |
| CCTGTTGCTCTTCATCAATC+TGG | 0.370196 | 8.3:+21381262 | MS.gene72371:CDS |
| ACTTGGTTGAATTCTTGGTC+TGG | 0.370346 | 8.3:-21381133 | None:intergenic |
| AGTTGGTTACACTCAAATTT+GGG | 0.376212 | 8.3:-21384984 | None:intergenic |
| GGTGTTAGAGGTGTTCTTGA+TGG | 0.391791 | 8.3:+21382451 | MS.gene72371:CDS |
| GTTGGTGTGTTTGTTACTAC+TGG | 0.394063 | 8.3:+21381238 | MS.gene72371:CDS |
| GGCTCTGTCTTTGTGCATGA+TGG | 0.401655 | 8.3:+21382612 | MS.gene72371:CDS |
| CTGAAAGCTCCTCCAGCAAC+TGG | 0.405724 | 8.3:-21381370 | None:intergenic |
| TTTATTTCCTATATCATAGC+TGG | 0.406170 | 8.3:+21381295 | MS.gene72371:CDS |
| CCTTATAAGAGCCTACCTAT+TGG | 0.406403 | 8.3:+21382544 | MS.gene72371:CDS |
| CCAAAAGGGATAGCTCCTTA+TGG | 0.407325 | 8.3:+21382430 | MS.gene72371:CDS |
| CCTTAATATTGGTTGGAGTT+GGG | 0.411834 | 8.3:+21384070 | MS.gene72371:CDS |
| ATAGCTCCTTATGGTGTTAG+AGG | 0.412926 | 8.3:+21382439 | MS.gene72371:CDS |
| TGGTATGATCTTGTAGCTCT+TGG | 0.419437 | 8.3:+21381196 | MS.gene72371:CDS |
| CCAGATTGATGAAGAGCAAC+AGG | 0.428383 | 8.3:-21381262 | None:intergenic |
| GCCGAGGAGATTGAGAATTT+GGG | 0.430127 | 8.3:+21384943 | MS.gene72371:CDS |
| CACCAGACCTCTGCCTCACT+TGG | 0.433168 | 8.3:-21381150 | None:intergenic |
| GATTAGCATTGGCACGCTAA+TGG | 0.433590 | 8.3:+21384510 | MS.gene72371:CDS |
| TGGTGGGGCAAATATACTAA+TGG | 0.434674 | 8.3:+21381648 | MS.gene72371:CDS |
| GGGCAAGGCTTGTTCCATCT+TGG | 0.436918 | 8.3:+21384189 | MS.gene72371:CDS |
| TTTGGATTCATCGTTGTGGC+TGG | 0.438413 | 8.3:+21382373 | MS.gene72371:CDS |
| GAGAAAATAATCCCAATGTA+TGG | 0.450687 | 8.3:+21381734 | MS.gene72371:CDS |
| AGGTGCAAGTTTAGGTATAG+TGG | 0.451944 | 8.3:+21384112 | MS.gene72371:CDS |
| GAGCCTACCTATTGGAATAG+TGG | 0.452705 | 8.3:+21382552 | MS.gene72371:CDS |
| ACTGAACCCACTATTCCAAT+AGG | 0.453533 | 8.3:-21382559 | None:intergenic |
| GCCAGATACCTTTGTGTCAT+GGG | 0.453690 | 8.3:+21384164 | MS.gene72371:CDS |
| TATGATGCAGGAGAATTCTT+GGG | 0.458515 | 8.3:+21381619 | MS.gene72371:intron |
| GATCTTGTAGCTCTTGGAGT+TGG | 0.460545 | 8.3:+21381202 | MS.gene72371:CDS |
| AGTTATTTAAGATTAACATT+TGG | 0.461337 | 8.3:+21381391 | MS.gene72371:CDS |
| AGTTGGGCAAGCAACATTGT+TGG | 0.465245 | 8.3:+21384086 | MS.gene72371:CDS |
| ATAATTGAGTTGATTAGCAT+TGG | 0.467575 | 8.3:+21384499 | MS.gene72371:CDS |
| TGGCTTTCCTTAATATTGGT+TGG | 0.469455 | 8.3:+21384063 | MS.gene72371:CDS |
| CTTGGAGTTGGAGGAATGCT+TGG | 0.469596 | 8.3:+21381214 | MS.gene72371:CDS |
| TGGTGGGGTCTCTTACTCTT+CGG | 0.470816 | 8.3:+21384676 | MS.gene72371:CDS |
| CTTGTAGCTCTTGGAGTTGG+AGG | 0.471002 | 8.3:+21381205 | MS.gene72371:CDS |
| GCCAAAGTACATCCTTCAAC+AGG | 0.471515 | 8.3:+21384215 | MS.gene72371:CDS |
| GTATGGAGAGTGGAAGTTCA+TGG | 0.471951 | 8.3:+21381751 | MS.gene72371:CDS |
| TGTAACCAACTTACAAACTA+AGG | 0.473407 | 8.3:+21384996 | MS.gene72371:CDS |
| TGTACAAGGTTGTTGTTACA+AGG | 0.475149 | 8.3:-21384742 | None:intergenic |
| CCAAACTATGGAGAAGCATA+AGG | 0.477093 | 8.3:-21384638 | None:intergenic |
| TTCCACCTTAGTTTGTAAGT+TGG | 0.479933 | 8.3:-21385001 | None:intergenic |
| ATATGACTGACCTTATTGTA+AGG | 0.480341 | 8.3:-21382637 | None:intergenic |
| GGTCTGGTGCAGACATGAAA+AGG | 0.485575 | 8.3:+21381164 | MS.gene72371:CDS |
| ACTTCCACTCTCCATACATT+GGG | 0.486802 | 8.3:-21381745 | None:intergenic |
| CACGCTAATGGTGTTCTACA+TGG | 0.494994 | 8.3:+21384522 | MS.gene72371:CDS |
| AACCAAGTGAGGCAGAGGTC+TGG | 0.496317 | 8.3:+21381148 | MS.gene72371:CDS |
| TCTCAAATGCTGCTGTAGCT+AGG | 0.500116 | 8.3:+21381680 | MS.gene72371:CDS |
| AGCCTACCTATTGGAATAGT+GGG | 0.500222 | 8.3:+21382553 | MS.gene72371:CDS |
| GCCTGTTGAAGGATGTACTT+TGG | 0.501517 | 8.3:-21384216 | None:intergenic |
| GTTGGAGGAATGCTTGGTGT+TGG | 0.502228 | 8.3:+21381220 | MS.gene72371:CDS |
| GGAAATTCAAACAGCAATGG+TGG | 0.509718 | 8.3:+21384659 | MS.gene72371:CDS |
| AGAACACCTCTAACACCATA+AGG | 0.511059 | 8.3:-21382445 | None:intergenic |
| TGATATTCCAGCTATGATAT+AGG | 0.513325 | 8.3:-21381302 | None:intergenic |
| GAAGGTGGCCATGGCATGAA+TGG | 0.513555 | 8.3:-21384793 | None:intergenic |
| GCAAGCAACATTGTTGGAGC+AGG | 0.513760 | 8.3:+21384092 | MS.gene72371:CDS |
| AGAGAAAGCATCATATTCAA+TGG | 0.515624 | 8.3:+21384043 | MS.gene72371:CDS |
| AAGTGAGGGAGAGAAGAAAG+AGG | 0.516262 | 8.3:-21384615 | None:intergenic |
| AACTTCCACTCTCCATACAT+TGG | 0.516853 | 8.3:-21381746 | None:intergenic |
| AAAACTTGGTTAATCCAAAA+GGG | 0.521490 | 8.3:+21382416 | MS.gene72371:CDS |
| GCCAAAGGATTATAACATGT+TGG | 0.521646 | 8.3:+21381777 | MS.gene72371:CDS |
| AACCATGGCTGAGGAGGTCA+AGG | 0.523071 | 8.3:+21382519 | MS.gene72371:CDS |
| GAAATTCAAACAGCAATGGT+GGG | 0.526735 | 8.3:+21384660 | MS.gene72371:CDS |
| AGAAGAATGAGAGCTACTGC+TGG | 0.527933 | 8.3:-21381805 | None:intergenic |
| ATGGACATTGAAGGTGGCCA+TGG | 0.537476 | 8.3:-21384802 | None:intergenic |
| AGCCAGATACCTTTGTGTCA+TGG | 0.541144 | 8.3:+21384163 | MS.gene72371:CDS |
| GAGCATATTCTTGTTGTACA+AGG | 0.543125 | 8.3:-21384756 | None:intergenic |
| AGCTTCAACCATGGCTGAGG+AGG | 0.545111 | 8.3:+21382513 | MS.gene72371:CDS |
| TGCACAAAGACAGAGCCATT+AGG | 0.546466 | 8.3:-21382606 | None:intergenic |
| GTGTGTGTAAAGGCGGTGTA+TGG | 0.548779 | 8.3:-21384585 | None:intergenic |
| AACAAGAATATGCTCAATGT+TGG | 0.550044 | 8.3:+21384764 | MS.gene72371:CDS |
| ATCCTTGACCTCCTCAGCCA+TGG | 0.551869 | 8.3:-21382521 | None:intergenic |
| GATGATTGATTTCAGTACAA+AGG | 0.552981 | 8.3:+21382303 | MS.gene72371:intron |
| TTCAGCTTCAACCATGGCTG+AGG | 0.555396 | 8.3:+21382510 | MS.gene72371:CDS |
| TTCAATGGAGTGCCTGTTGA+AGG | 0.556143 | 8.3:-21384227 | None:intergenic |
| GGAGAAGCATAAGGAAGTGA+GGG | 0.556959 | 8.3:-21384629 | None:intergenic |
| GATACCTTTGTGTCATGGGA+AGG | 0.563239 | 8.3:+21384168 | MS.gene72371:CDS |
| TTGAGGAAGATGGACATTGA+AGG | 0.567242 | 8.3:-21384811 | None:intergenic |
| ACCCAAATTCTCAATCTCCT+CGG | 0.568939 | 8.3:-21384944 | None:intergenic |
| TGGAGAAGCATAAGGAAGTG+AGG | 0.569100 | 8.3:-21384630 | None:intergenic |
| AATTCAACCAAGTGAGGCAG+AGG | 0.569150 | 8.3:+21381143 | MS.gene72371:CDS |
| TTTGGAAATTCAAACAGCAA+TGG | 0.571143 | 8.3:+21384656 | MS.gene72371:CDS |
| TGTACTTTGGCTAACCAAGA+TGG | 0.571883 | 8.3:-21384203 | None:intergenic |
| TACCGTCGCTATGTAATCAT+CGG | 0.577579 | 8.3:+21384562 | MS.gene72371:CDS |
| ATGACCATATAGCAAAGCGT+TGG | 0.577715 | 8.3:-21384870 | None:intergenic |
| CTATGATTCAGCTTCAACCA+TGG | 0.580237 | 8.3:+21382504 | MS.gene72371:CDS |
| ATACCTTTGTGTCATGGGAA+GGG | 0.590763 | 8.3:+21384169 | MS.gene72371:CDS |
| TAATCCCAATGTATGGAGAG+TGG | 0.592516 | 8.3:+21381741 | MS.gene72371:CDS |
| CATGGAACACTGTCATAATG+AGG | 0.594067 | 8.3:-21382342 | None:intergenic |
| GTTGTGGCTGGTTATTACAA+TGG | 0.594223 | 8.3:+21382385 | MS.gene72371:CDS |
| GTTCAAGTTCCAGTTGCTGG+AGG | 0.596218 | 8.3:+21381361 | MS.gene72371:CDS |
| GGAAAAGAATGCTAGCAACA+TGG | 0.601745 | 8.3:+21381107 | None:intergenic |
| TGTTACAAGGCACCATGTGT+TGG | 0.603576 | 8.3:-21384729 | None:intergenic |
| AGGAACAAAAGTGTGTGTAA+AGG | 0.603696 | 8.3:-21384595 | None:intergenic |
| GGAAGTTCATGGATTGCCAA+AGG | 0.604127 | 8.3:+21381762 | MS.gene72371:CDS |
| TTTGGGTGGTGTTAATCAAG+TGG | 0.606482 | 8.3:+21384960 | MS.gene72371:CDS |
| GGTATGTGCCATTCATGCCA+TGG | 0.610730 | 8.3:+21384785 | MS.gene72371:CDS |
| TTTCTTTGGATTCATCGTTG+TGG | 0.629846 | 8.3:+21382369 | MS.gene72371:CDS |
| TGGGGTCTCTTACTCTTCGG+TGG | 0.630179 | 8.3:+21384679 | MS.gene72371:CDS |
| AACAAAAGTGTGTGTAAAGG+CGG | 0.630640 | 8.3:-21384592 | None:intergenic |
| ACCAAGAATTCAACCAAGTG+AGG | 0.631416 | 8.3:+21381137 | MS.gene72371:CDS |
| ATATAGGAAATAAAGACTGA+AGG | 0.634540 | 8.3:-21381286 | None:intergenic |
| AAATTCAAACAGCAATGGTG+GGG | 0.636518 | 8.3:+21384661 | MS.gene72371:CDS |
| AACCAACTTACAAACTAAGG+TGG | 0.646197 | 8.3:+21384999 | MS.gene72371:CDS |
| GAGGAGATTGAGAATTTGGG+TGG | 0.655023 | 8.3:+21384946 | MS.gene72371:CDS |
| ACCATAAAGCACATAAAACA+TGG | 0.658020 | 8.3:-21384902 | None:intergenic |
| AGGAAGATGGACATTGAAGG+TGG | 0.658680 | 8.3:-21384808 | None:intergenic |
| TTTGTGTCATGGGAAGGGCA+AGG | 0.658768 | 8.3:+21384174 | MS.gene72371:CDS |
| TTGCCCTTCCCATGACACAA+AGG | 0.659610 | 8.3:-21384172 | None:intergenic |
| GGCCGATGATTACATAGCGA+CGG | 0.666130 | 8.3:-21384564 | None:intergenic |
| TGAATCCAAAGAAAATCACA+TGG | 0.692143 | 8.3:-21382360 | None:intergenic |
| TCACTCTACATATCAAGCCG+AGG | 0.695776 | 8.3:+21384927 | MS.gene72371:CDS |
| TATGACACAAGCAAAGAGTG+AGG | 0.719524 | 8.3:-21381828 | None:intergenic |
| AACCCACTATTCCAATAGGT+AGG | 0.722428 | 8.3:-21382555 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAGGAAAATAA+TGG | + | chr8.3:21383614-21383633 | MS.gene72371:intron | 10.0% |
| !! | AAAAAAAAAAGGAAAATAAT+GGG | + | chr8.3:21383615-21383634 | MS.gene72371:intron | 10.0% |
| !! | AAGAATGATAATTATTTATT+TGG | - | chr8.3:21382276-21382295 | None:intergenic | 10.0% |
| !! | ATATTCAAAATTGTAAATAA+TGG | - | chr8.3:21382201-21382220 | None:intergenic | 10.0% |
| !!! | AAATTTTCAAAAATATTTGA+TGG | - | chr8.3:21384286-21384305 | None:intergenic | 10.0% |
| !!! | AATTTAAAACTATACTAATT+AGG | + | chr8.3:21382062-21382081 | MS.gene72371:intron | 10.0% |
| !!! | ATATTTTGTCAAAAAAAAAT+TGG | - | chr8.3:21383329-21383348 | None:intergenic | 10.0% |
| !!! | TATAAAATTTAATGGATAAT+TGG | + | chr8.3:21383653-21383672 | MS.gene72371:intron | 10.0% |
| !!! | TTAAATTTTTTGATTAAATG+TGG | + | chr8.3:21383515-21383534 | MS.gene72371:intron | 10.0% |
| !!! | TTATTTTCCTTTTTTTTTTT+TGG | - | chr8.3:21383614-21383633 | None:intergenic | 10.0% |
| !! | TGAATGTATAATTACTAAAA+TGG | + | chr8.3:21383101-21383120 | MS.gene72371:intron | 15.0% |
| !! | TTTAATTCAAATACATTGTT+AGG | - | chr8.3:21382792-21382811 | None:intergenic | 15.0% |
| !!! | AGTTATTTAAGATTAACATT+TGG | + | chr8.3:21381391-21381410 | MS.gene72371:CDS | 15.0% |
| !!! | ATTAGTATAGTTTTAAATTG+TGG | - | chr8.3:21382061-21382080 | None:intergenic | 15.0% |
| !!! | TACAATTTTGAATATTTAAC+TGG | + | chr8.3:21382206-21382225 | MS.gene72371:intron | 15.0% |
| !! | ACTATACTAATTAGGTTAAT+TGG | + | chr8.3:21382070-21382089 | MS.gene72371:intron | 20.0% |
| !! | ATAGTGTACTTTAGTTATAT+AGG | + | chr8.3:21382481-21382500 | MS.gene72371:CDS | 20.0% |
| !! | ATATCAAACTAAAAAACAGA+AGG | - | chr8.3:21381894-21381913 | None:intergenic | 20.0% |
| !! | CATAGCTATATACAAATAAA+TGG | + | chr8.3:21383125-21383144 | MS.gene72371:intron | 20.0% |
| !! | CTATACTAATTAGGTTAATT+GGG | + | chr8.3:21382071-21382090 | MS.gene72371:intron | 20.0% |
| !! | TAGTTAATTGTCTTATCTTT+GGG | + | chr8.3:21384333-21384352 | MS.gene72371:intron | 20.0% |
| !! | TATACTAATTAGGTTAATTG+GGG | + | chr8.3:21382072-21382091 | MS.gene72371:intron | 20.0% |
| !! | TATTTGAATTAAATACGTCT+AGG | + | chr8.3:21382799-21382818 | MS.gene72371:intron | 20.0% |
| !! | TGAAAGAATTGATATATGTT+TGG | + | chr8.3:21383011-21383030 | MS.gene72371:intron | 20.0% |
| !! | TGTATAAAATATCCAAAACT+TGG | + | chr8.3:21383450-21383469 | MS.gene72371:intron | 20.0% |
| !! | TTAAATACAAACCAAAATGA+AGG | + | chr8.3:21383547-21383566 | MS.gene72371:intron | 20.0% |
| !! | TTAGTTAATTGTCTTATCTT+TGG | + | chr8.3:21384332-21384351 | MS.gene72371:intron | 20.0% |
| !! | TTATTAGTTGAACAATGAAT+TGG | + | chr8.3:21382890-21382909 | MS.gene72371:intron | 20.0% |
| !!! | AAGCTATATATTCTTTGAAA+TGG | + | chr8.3:21384008-21384027 | MS.gene72371:intron | 20.0% |
| !!! | CTTGACCATAAATATTTTTT+GGG | + | chr8.3:21383478-21383497 | MS.gene72371:intron | 20.0% |
| !!! | GAACTGTATTTTTTCTTTTT+TGG | - | chr8.3:21383417-21383436 | None:intergenic | 20.0% |
| !!! | TATGTTAGTATTTTTCTTCA+GGG | - | chr8.3:21382832-21382851 | None:intergenic | 20.0% |
| !!! | TCTTGACCATAAATATTTTT+TGG | + | chr8.3:21383477-21383496 | MS.gene72371:intron | 20.0% |
| !!! | TTATGTTAGTATTTTTCTTC+AGG | - | chr8.3:21382833-21382852 | None:intergenic | 20.0% |
| !!! | TTGACCATAAATATTTTTTG+GGG | + | chr8.3:21383479-21383498 | MS.gene72371:intron | 20.0% |
| !!! | TTTAGTTTGATATTGTATCA+AGG | + | chr8.3:21381901-21381920 | MS.gene72371:intron | 20.0% |
| ! | AAAAACTTGGTTAATCCAAA+AGG | + | chr8.3:21382415-21382434 | MS.gene72371:CDS | 25.0% |
| ! | AAAACTTGGTTAATCCAAAA+GGG | + | chr8.3:21382416-21382435 | MS.gene72371:CDS | 25.0% |
| ! | AAATGAAGGAGAATTGATAA+AGG | + | chr8.3:21383561-21383580 | MS.gene72371:intron | 25.0% |
| ! | AACTTTACTTTATTGCCTAA+TGG | + | chr8.3:21382591-21382610 | MS.gene72371:CDS | 25.0% |
| ! | AATTCAAATACATTGTTAGG+CGG | - | chr8.3:21382789-21382808 | None:intergenic | 25.0% |
| ! | ACATGAAAAGGAAACTTAAT+TGG | + | chr8.3:21381176-21381195 | MS.gene72371:CDS | 25.0% |
| ! | AGGACAATAAAGGAAAATAA+TGG | + | chr8.3:21383581-21383600 | MS.gene72371:intron | 25.0% |
| ! | AGTTAATTGTCTTATCTTTG+GGG | + | chr8.3:21384334-21384353 | MS.gene72371:intron | 25.0% |
| ! | ATATAAATTACGTGTGTGTT+TGG | + | chr8.3:21382919-21382938 | MS.gene72371:intron | 25.0% |
| ! | ATATAGGAAATAAAGACTGA+AGG | - | chr8.3:21381289-21381308 | None:intergenic | 25.0% |
| ! | CTTCAAAATCCTTTATATTG+CGG | + | chr8.3:21382028-21382047 | MS.gene72371:intron | 25.0% |
| ! | GAATTGATAAAGGACAATAA+AGG | + | chr8.3:21383571-21383590 | MS.gene72371:intron | 25.0% |
| ! | GGACAATAAAGGAAAATAAT+GGG | + | chr8.3:21383582-21383601 | MS.gene72371:intron | 25.0% |
| ! | GTGTTCACCAAAAAAAAAAA+AGG | + | chr8.3:21383604-21383623 | MS.gene72371:intron | 25.0% |
| ! | TAAAGAGAATGAATGTTGTT+TGG | + | chr8.3:21383055-21383074 | MS.gene72371:intron | 25.0% |
| ! | TTAGCCCCAAAAAATATTTA+TGG | - | chr8.3:21383486-21383505 | None:intergenic | 25.0% |
| ! | TTTATTTCCTATATCATAGC+TGG | + | chr8.3:21381295-21381314 | MS.gene72371:CDS | 25.0% |
| !! | AAGTTAAATAATAATGGAGC+TGG | + | chr8.3:21383388-21383407 | MS.gene72371:intron | 25.0% |
| !! | TTATCAATTCTCCTTCATTT+TGG | - | chr8.3:21383561-21383580 | None:intergenic | 25.0% |
| !! | TTTTGGATTAACCAAGTTTT+TGG | - | chr8.3:21382416-21382435 | None:intergenic | 25.0% |
| !!! | AATATTTTTTGGGGCTAATT+TGG | + | chr8.3:21383488-21383507 | MS.gene72371:intron | 25.0% |
| !!! | AATTGCCTTTTTCAATTTTG+AGG | + | chr8.3:21383771-21383790 | MS.gene72371:intron | 25.0% |
| !!! | ATAATTGAGTTGATTAGCAT+TGG | + | chr8.3:21384499-21384518 | MS.gene72371:CDS | 25.0% |
| !!! | GAATATTTGAGTTTTGCTTT+TGG | + | chr8.3:21381712-21381731 | MS.gene72371:CDS | 25.0% |
| !!! | TGTTTTTTATAATGAGAGGA+TGG | + | chr8.3:21382162-21382181 | MS.gene72371:intron | 25.0% |
| !!! | TTGGTGTTTTTTATAATGAG+AGG | + | chr8.3:21382158-21382177 | MS.gene72371:intron | 25.0% |
| AAAAACTGTGATTGTGATCA+TGG | - | chr8.3:21384707-21384726 | None:intergenic | 30.0% | |
| AACAAGAATATGCTCAATGT+TGG | + | chr8.3:21384764-21384783 | MS.gene72371:CDS | 30.0% | |
| AATATCCACCCAATGAAATA+AGG | - | chr8.3:21382100-21382119 | None:intergenic | 30.0% | |
| ACCATAAAGCACATAAAACA+TGG | - | chr8.3:21384905-21384924 | None:intergenic | 30.0% | |
| AGTTGGTTACACTCAAATTT+GGG | - | chr8.3:21384987-21385006 | None:intergenic | 30.0% | |
| ATATGACTGACCTTATTGTA+AGG | - | chr8.3:21382640-21382659 | None:intergenic | 30.0% | |
| ATCAATTCATTTATTGACGC+AGG | + | chr8.3:21384433-21384452 | MS.gene72371:intron | 30.0% | |
| CTGTTTGAATTTCCAAACTA+TGG | - | chr8.3:21384653-21384672 | None:intergenic | 30.0% | |
| GAGAAAATAATCCCAATGTA+TGG | + | chr8.3:21381734-21381753 | MS.gene72371:CDS | 30.0% | |
| TAGAGCCTCAAAATTGAAAA+AGG | - | chr8.3:21383779-21383798 | None:intergenic | 30.0% | |
| TAGTCATGAGAAAAACATTG+AGG | - | chr8.3:21384831-21384850 | None:intergenic | 30.0% | |
| TCAATGGCTTTCCTTAATAT+TGG | + | chr8.3:21384059-21384078 | MS.gene72371:CDS | 30.0% | |
| TCCAACATGTTATAATCCTT+TGG | - | chr8.3:21381781-21381800 | None:intergenic | 30.0% | |
| TGAATCCAAAGAAAATCACA+TGG | - | chr8.3:21382363-21382382 | None:intergenic | 30.0% | |
| TGATATTCCAGCTATGATAT+AGG | - | chr8.3:21381305-21381324 | None:intergenic | 30.0% | |
| TGCAAAATGCGAAAAAAATG+TGG | + | chr8.3:21381965-21381984 | MS.gene72371:intron | 30.0% | |
| TGTAACCAACTTACAAACTA+AGG | + | chr8.3:21384996-21385015 | MS.gene72371:CDS | 30.0% | |
| TGTCATAATGAGGTTCAATA+TGG | - | chr8.3:21382335-21382354 | None:intergenic | 30.0% | |
| TTAATTGCTTTACCTCTAGA+AGG | - | chr8.3:21383888-21383907 | None:intergenic | 30.0% | |
| TTTGGAAATTCAAACAGCAA+TGG | + | chr8.3:21384656-21384675 | MS.gene72371:CDS | 30.0% | |
| ! | AAAAAGATAGTGGCATTCAA+TGG | - | chr8.3:21384245-21384264 | None:intergenic | 30.0% |
| ! | AAGGCAATTTTTCACATGTT+TGG | - | chr8.3:21383760-21383779 | None:intergenic | 30.0% |
| ! | AAGTTGGTTACACTCAAATT+TGG | - | chr8.3:21384988-21385007 | None:intergenic | 30.0% |
| ! | ACCATGTTTTATGTGCTTTA+TGG | + | chr8.3:21384901-21384920 | MS.gene72371:CDS | 30.0% |
| ! | ATTGAATGCCACTATCTTTT+TGG | + | chr8.3:21384244-21384263 | MS.gene72371:CDS | 30.0% |
| ! | GATGATTGATTTCAGTACAA+AGG | + | chr8.3:21382303-21382322 | MS.gene72371:intron | 30.0% |
| ! | TTCTAGTTAACTCAAAAGCT+AGG | + | chr8.3:21383676-21383695 | MS.gene72371:intron | 30.0% |
| ! | TTGAATGCCACTATCTTTTT+GGG | + | chr8.3:21384245-21384264 | MS.gene72371:CDS | 30.0% |
| !! | AGAGAAAGCATCATATTCAA+TGG | + | chr8.3:21384043-21384062 | MS.gene72371:CDS | 30.0% |
| !! | GAATATTTAACTGGCTTTAG+TGG | + | chr8.3:21382215-21382234 | MS.gene72371:intron | 30.0% |
| !!! | AATTCTTGGGATATTTTGGT+GGG | + | chr8.3:21381632-21381651 | MS.gene72371:CDS | 30.0% |
| !!! | TCTTTTTTTGCTTATGATGC+AGG | + | chr8.3:21381607-21381626 | MS.gene72371:intron | 30.0% |
| AAATTCAAACAGCAATGGTG+GGG | + | chr8.3:21384661-21384680 | MS.gene72371:CDS | 35.0% | |
| AACCAACTTACAAACTAAGG+TGG | + | chr8.3:21384999-21385018 | MS.gene72371:CDS | 35.0% | |
| CATGATGGTTCCTTACAATA+AGG | + | chr8.3:21382627-21382646 | MS.gene72371:CDS | 35.0% | |
| CGAAAAAAATGTGGTTGACA+TGG | + | chr8.3:21381974-21381993 | MS.gene72371:intron | 35.0% | |
| CTAGTTAGAATTCCTTCTAG+AGG | + | chr8.3:21383873-21383892 | MS.gene72371:intron | 35.0% | |
| GAAATTCAAACAGCAATGGT+GGG | + | chr8.3:21384660-21384679 | MS.gene72371:CDS | 35.0% | |
| GAGAAAAACATTGAGGAAGA+TGG | - | chr8.3:21384824-21384843 | None:intergenic | 35.0% | |
| GCCAAAGGATTATAACATGT+TGG | + | chr8.3:21381777-21381796 | MS.gene72371:CDS | 35.0% | |
| TAGAATAAGCTGAACCAAAC+AGG | + | chr8.3:21383815-21383834 | MS.gene72371:intron | 35.0% | |
| TATGATGCAGGAGAATTCTT+GGG | + | chr8.3:21381619-21381638 | MS.gene72371:intron | 35.0% | |
| TCAAGCTCTTATCATTAAGC+CGG | - | chr8.3:21384362-21384381 | None:intergenic | 35.0% | |
| TGGCTTTCCTTAATATTGGT+TGG | + | chr8.3:21384063-21384082 | MS.gene72371:CDS | 35.0% | |
| TTATGATGCAGGAGAATTCT+TGG | + | chr8.3:21381618-21381637 | MS.gene72371:intron | 35.0% | |
| TTGCTTACCCAAAAAGATAG+TGG | - | chr8.3:21384255-21384274 | None:intergenic | 35.0% | |
| TTTCTTTGGATTCATCGTTG+TGG | + | chr8.3:21382369-21382388 | MS.gene72371:CDS | 35.0% | |
| ! | AACAAAAGTGTGTGTAAAGG+CGG | - | chr8.3:21384595-21384614 | None:intergenic | 35.0% |
| ! | AGGAACAAAAGTGTGTGTAA+AGG | - | chr8.3:21384598-21384617 | None:intergenic | 35.0% |
| ! | ATTGGGGAACCTTATTTCAT+TGG | + | chr8.3:21382088-21382107 | MS.gene72371:intron | 35.0% |
| ! | CCTTAATATTGGTTGGAGTT+GGG | + | chr8.3:21384070-21384089 | MS.gene72371:CDS | 35.0% |
| ! | GAGCATATTCTTGTTGTACA+AGG | - | chr8.3:21384759-21384778 | None:intergenic | 35.0% |
| ! | GGAGAATTCTTGGGATATTT+TGG | + | chr8.3:21381628-21381647 | MS.gene72371:intron | 35.0% |
| ! | GTGTTCCATGTGATTTTCTT+TGG | + | chr8.3:21382355-21382374 | MS.gene72371:CDS | 35.0% |
| ! | TCCTTAATATTGGTTGGAGT+TGG | + | chr8.3:21384069-21384088 | MS.gene72371:CDS | 35.0% |
| ! | TCTCTTCTAGTTGCAATGTT+AGG | + | chr8.3:21384137-21384156 | MS.gene72371:CDS | 35.0% |
| ! | TGTACAAGGTTGTTGTTACA+AGG | - | chr8.3:21384745-21384764 | None:intergenic | 35.0% |
| ! | TTGGGGAACCTTATTTCATT+GGG | + | chr8.3:21382089-21382108 | MS.gene72371:intron | 35.0% |
| !! | CAATGGAAGTACCAAAAACT+TGG | + | chr8.3:21382402-21382421 | MS.gene72371:CDS | 35.0% |
| !! | GAATTCTTGGGATATTTTGG+TGG | + | chr8.3:21381631-21381650 | MS.gene72371:CDS | 35.0% |
| !! | TTCCACCTTAGTTTGTAAGT+TGG | - | chr8.3:21385004-21385023 | None:intergenic | 35.0% |
| !!! | ATTCTTGGGATATTTTGGTG+GGG | + | chr8.3:21381633-21381652 | MS.gene72371:CDS | 35.0% |
| !!! | CACAGTTTTTTTCCAACACA+TGG | + | chr8.3:21384717-21384736 | MS.gene72371:CDS | 35.0% |
| !!! | TTGGAAAGAGAGTGTTTTGA+GGG | - | chr8.3:21384854-21384873 | None:intergenic | 35.0% |
| AACCCACTATTCCAATAGGT+AGG | - | chr8.3:21382558-21382577 | None:intergenic | 40.0% | |
| AACTTCCACTCTCCATACAT+TGG | - | chr8.3:21381749-21381768 | None:intergenic | 40.0% | |
| ACCAAGAATTCAACCAAGTG+AGG | + | chr8.3:21381137-21381156 | MS.gene72371:CDS | 40.0% | |
| ACCCAAATTCTCAATCTCCT+CGG | - | chr8.3:21384947-21384966 | None:intergenic | 40.0% | |
| ACTGAACCCACTATTCCAAT+AGG | - | chr8.3:21382562-21382581 | None:intergenic | 40.0% | |
| ACTTCCACTCTCCATACATT+GGG | - | chr8.3:21381748-21381767 | None:intergenic | 40.0% | |
| ACTTGGTTGAATTCTTGGTC+TGG | - | chr8.3:21381136-21381155 | None:intergenic | 40.0% | |
| AGAACACCTCTAACACCATA+AGG | - | chr8.3:21382448-21382467 | None:intergenic | 40.0% | |
| AGCCTACCTATTGGAATAGT+GGG | + | chr8.3:21382553-21382572 | MS.gene72371:CDS | 40.0% | |
| AGGTGCAAGTTTAGGTATAG+TGG | + | chr8.3:21384112-21384131 | MS.gene72371:CDS | 40.0% | |
| ATACCTTTGTGTCATGGGAA+GGG | + | chr8.3:21384169-21384188 | MS.gene72371:CDS | 40.0% | |
| ATGACCATATAGCAAAGCGT+TGG | - | chr8.3:21384873-21384892 | None:intergenic | 40.0% | |
| CATGGAACACTGTCATAATG+AGG | - | chr8.3:21382345-21382364 | None:intergenic | 40.0% | |
| CCAATAGGTAGGCTCTTATA+AGG | - | chr8.3:21382547-21382566 | None:intergenic | 40.0% | |
| CCCAACTCCAACCAATATTA+AGG | - | chr8.3:21384073-21384092 | None:intergenic | 40.0% | |
| CCTTATAAGAGCCTACCTAT+TGG | + | chr8.3:21382544-21382563 | MS.gene72371:CDS | 40.0% | |
| CCTTATGCTTCTCCATAGTT+TGG | + | chr8.3:21384638-21384657 | MS.gene72371:CDS | 40.0% | |
| CTATGATTCAGCTTCAACCA+TGG | + | chr8.3:21382504-21382523 | MS.gene72371:CDS | 40.0% | |
| CTCTTCTGCAAAAGCTATTC+TGG | - | chr8.3:21383716-21383735 | None:intergenic | 40.0% | |
| GGAAATTCAAACAGCAATGG+TGG | + | chr8.3:21384659-21384678 | MS.gene72371:CDS | 40.0% | |
| TAATCCCAATGTATGGAGAG+TGG | + | chr8.3:21381741-21381760 | MS.gene72371:CDS | 40.0% | |
| TACCGTCGCTATGTAATCAT+CGG | + | chr8.3:21384562-21384581 | MS.gene72371:CDS | 40.0% | |
| TATGACACAAGCAAAGAGTG+AGG | - | chr8.3:21381831-21381850 | None:intergenic | 40.0% | |
| TCACTCTTTGCTTGTGTCAT+AGG | + | chr8.3:21381830-21381849 | MS.gene72371:CDS | 40.0% | |
| TGGTATGATCTTGTAGCTCT+TGG | + | chr8.3:21381196-21381215 | MS.gene72371:CDS | 40.0% | |
| TGGTGGGGCAAATATACTAA+TGG | + | chr8.3:21381648-21381667 | MS.gene72371:CDS | 40.0% | |
| TGTACTTTGGCTAACCAAGA+TGG | - | chr8.3:21384206-21384225 | None:intergenic | 40.0% | |
| TGTGACAGCTAACACAAACT+TGG | + | chr8.3:21382139-21382158 | MS.gene72371:intron | 40.0% | |
| TTGAGGAAGATGGACATTGA+AGG | - | chr8.3:21384814-21384833 | None:intergenic | 40.0% | |
| ! | ATAGCTCCTTATGGTGTTAG+AGG | + | chr8.3:21382439-21382458 | MS.gene72371:CDS | 40.0% |
| ! | ATTCTAGTTACGAGCCTGTT+TGG | - | chr8.3:21383832-21383851 | None:intergenic | 40.0% |
| ! | CCAAACTATGGAGAAGCATA+AGG | - | chr8.3:21384641-21384660 | None:intergenic | 40.0% |
| ! | CTTTCCAACGCTTTGCTATA+TGG | + | chr8.3:21384866-21384885 | MS.gene72371:CDS | 40.0% |
| ! | GGTCAAGAGTTACCAAGTTT+TGG | - | chr8.3:21383465-21383484 | None:intergenic | 40.0% |
| ! | GTGTGTGTTTGGTTCAACTT+TGG | + | chr8.3:21382930-21382949 | MS.gene72371:intron | 40.0% |
| ! | GTTGGTGTGTTTGTTACTAC+TGG | + | chr8.3:21381238-21381257 | MS.gene72371:CDS | 40.0% |
| ! | GTTGTGGCTGGTTATTACAA+TGG | + | chr8.3:21382385-21382404 | MS.gene72371:CDS | 40.0% |
| ! | TTTGGGTGGTGTTAATCAAG+TGG | + | chr8.3:21384960-21384979 | MS.gene72371:CDS | 40.0% |
| !! | TTGTCTTATCTTTGGGGTTC+CGG | + | chr8.3:21384340-21384359 | MS.gene72371:intron | 40.0% |
| !!! | GGATTTTGAAGTCTCTGCAA+CGG | - | chr8.3:21382019-21382038 | None:intergenic | 40.0% |
| !!! | GTTGGAAAGAGAGTGTTTTG+AGG | - | chr8.3:21384855-21384874 | None:intergenic | 40.0% |
| AAAGACGTGTCCAACACGTT+TGG | + | chr8.3:21381472-21381491 | MS.gene72371:intron | 45.0% | |
| AAGACGTGTCCAACACGTTT+GGG | + | chr8.3:21381473-21381492 | MS.gene72371:intron | 45.0% | |
| AAGTGAGGGAGAGAAGAAAG+AGG | - | chr8.3:21384618-21384637 | None:intergenic | 45.0% | |
| AATTCAACCAAGTGAGGCAG+AGG | + | chr8.3:21381143-21381162 | MS.gene72371:CDS | 45.0% | |
| AGAAGAATGAGAGCTACTGC+TGG | - | chr8.3:21381808-21381827 | None:intergenic | 45.0% | |
| AGCCAGATACCTTTGTGTCA+TGG | + | chr8.3:21384163-21384182 | MS.gene72371:CDS | 45.0% | |
| AGCCGAGGAGATTGAGAATT+TGG | + | chr8.3:21384942-21384961 | MS.gene72371:CDS | 45.0% | |
| AGGAAGATGGACATTGAAGG+TGG | - | chr8.3:21384811-21384830 | None:intergenic | 45.0% | |
| AGTTGGGCAAGCAACATTGT+TGG | + | chr8.3:21384086-21384105 | MS.gene72371:CDS | 45.0% | |
| CACGCTAATGGTGTTCTACA+TGG | + | chr8.3:21384522-21384541 | MS.gene72371:CDS | 45.0% | |
| CCAAAAGGGATAGCTCCTTA+TGG | + | chr8.3:21382430-21382449 | MS.gene72371:CDS | 45.0% | |
| CCAGATTGATGAAGAGCAAC+AGG | - | chr8.3:21381265-21381284 | None:intergenic | 45.0% | |
| CCTGTTGCTCTTCATCAATC+TGG | + | chr8.3:21381262-21381281 | MS.gene72371:CDS | 45.0% | |
| GAGCCTACCTATTGGAATAG+TGG | + | chr8.3:21382552-21382571 | MS.gene72371:CDS | 45.0% | |
| GAGGAGATTGAGAATTTGGG+TGG | + | chr8.3:21384946-21384965 | MS.gene72371:CDS | 45.0% | |
| GATACCTTTGTGTCATGGGA+AGG | + | chr8.3:21384168-21384187 | MS.gene72371:CDS | 45.0% | |
| GATCTTGTAGCTCTTGGAGT+TGG | + | chr8.3:21381202-21381221 | MS.gene72371:CDS | 45.0% | |
| GCCAAAGTACATCCTTCAAC+AGG | + | chr8.3:21384215-21384234 | MS.gene72371:CDS | 45.0% | |
| GCCAGATACCTTTGTGTCAT+GGG | + | chr8.3:21384164-21384183 | MS.gene72371:CDS | 45.0% | |
| GCCGAGGAGATTGAGAATTT+GGG | + | chr8.3:21384943-21384962 | MS.gene72371:CDS | 45.0% | |
| GCCTCACTTGGTTGAATTCT+TGG | - | chr8.3:21381141-21381160 | None:intergenic | 45.0% | |
| GCCTGTTGAAGGATGTACTT+TGG | - | chr8.3:21384219-21384238 | None:intergenic | 45.0% | |
| GGTCTGCAACCGCAATATAA+AGG | - | chr8.3:21382040-21382059 | None:intergenic | 45.0% | |
| GTATGGAGAGTGGAAGTTCA+TGG | + | chr8.3:21381751-21381770 | MS.gene72371:CDS | 45.0% | |
| TCACTCTACATATCAAGCCG+AGG | + | chr8.3:21384927-21384946 | MS.gene72371:CDS | 45.0% | |
| TCTCAAATGCTGCTGTAGCT+AGG | + | chr8.3:21381680-21381699 | MS.gene72371:CDS | 45.0% | |
| TGCACAAAGACAGAGCCATT+AGG | - | chr8.3:21382609-21382628 | None:intergenic | 45.0% | |
| TTTGGATTCATCGTTGTGGC+TGG | + | chr8.3:21382373-21382392 | MS.gene72371:CDS | 45.0% | |
| ! | CCATAAGGAGCTATCCCTTT+TGG | - | chr8.3:21382433-21382452 | None:intergenic | 45.0% |
| ! | GGAAGTTCATGGATTGCCAA+AGG | + | chr8.3:21381762-21381781 | MS.gene72371:CDS | 45.0% |
| ! | GGAGAAGCATAAGGAAGTGA+GGG | - | chr8.3:21384632-21384651 | None:intergenic | 45.0% |
| ! | GGGAACCTTATTTCATTGGG+TGG | + | chr8.3:21382092-21382111 | MS.gene72371:intron | 45.0% |
| ! | TGGAGAAGCATAAGGAAGTG+AGG | - | chr8.3:21384633-21384652 | None:intergenic | 45.0% |
| ! | TGTTACAAGGCACCATGTGT+TGG | - | chr8.3:21384732-21384751 | None:intergenic | 45.0% |
| ! | TTCAATGGAGTGCCTGTTGA+AGG | - | chr8.3:21384230-21384249 | None:intergenic | 45.0% |
| !! | GATTAGCATTGGCACGCTAA+TGG | + | chr8.3:21384510-21384529 | MS.gene72371:CDS | 45.0% |
| !! | GGTGTTAGAGGTGTTCTTGA+TGG | + | chr8.3:21382451-21382470 | MS.gene72371:CDS | 45.0% |
| !! | TCCCATGACACAAAGGTATC+TGG | - | chr8.3:21384168-21384187 | None:intergenic | 45.0% |
| !! | AATCAAAATATAAAATTTAA+TGG | + | chr8.3:21383645-21383664 | MS.gene72371:intron | 5.0% |
| !!! | ATATTTAAGTTAAATAATAA+TGG | + | chr8.3:21383382-21383401 | MS.gene72371:intron | 5.0% |
| ATGGACATTGAAGGTGGCCA+TGG | - | chr8.3:21384805-21384824 | None:intergenic | 50.0% | |
| CTGTCCAAACCCAAACGTGT+TGG | - | chr8.3:21381485-21381504 | None:intergenic | 50.0% | |
| CTTGGAGTTGGAGGAATGCT+TGG | + | chr8.3:21381214-21381233 | MS.gene72371:CDS | 50.0% | |
| CTTGTAGCTCTTGGAGTTGG+AGG | + | chr8.3:21381205-21381224 | MS.gene72371:CDS | 50.0% | |
| GCAAGCAACATTGTTGGAGC+AGG | + | chr8.3:21384092-21384111 | MS.gene72371:CDS | 50.0% | |
| GGCCGATGATTACATAGCGA+CGG | - | chr8.3:21384567-21384586 | None:intergenic | 50.0% | |
| GGCTCTGTCTTTGTGCATGA+TGG | + | chr8.3:21382612-21382631 | MS.gene72371:CDS | 50.0% | |
| GGTCTGGTGCAGACATGAAA+AGG | + | chr8.3:21381164-21381183 | MS.gene72371:CDS | 50.0% | |
| GTGTGTGTAAAGGCGGTGTA+TGG | - | chr8.3:21384588-21384607 | None:intergenic | 50.0% | |
| GTTGGAGCAGGTGCAAGTTT+AGG | + | chr8.3:21384104-21384123 | MS.gene72371:CDS | 50.0% | |
| TGGTGGGGTCTCTTACTCTT+CGG | + | chr8.3:21384676-21384695 | MS.gene72371:CDS | 50.0% | |
| TTCAGCTTCAACCATGGCTG+AGG | + | chr8.3:21382510-21382529 | MS.gene72371:CDS | 50.0% | |
| TTGCCCTTCCCATGACACAA+AGG | - | chr8.3:21384175-21384194 | None:intergenic | 50.0% | |
| TTTGTGTCATGGGAAGGGCA+AGG | + | chr8.3:21384174-21384193 | MS.gene72371:CDS | 50.0% | |
| ! | GCAGTTCAAGTTCCAGTTGC+TGG | + | chr8.3:21381358-21381377 | MS.gene72371:CDS | 50.0% |
| ! | GGTATGTGCCATTCATGCCA+TGG | + | chr8.3:21384785-21384804 | MS.gene72371:CDS | 50.0% |
| ! | GTGTCCAACACGTTTGGGTT+TGG | + | chr8.3:21381478-21381497 | MS.gene72371:intron | 50.0% |
| ! | GTTCAAGTTCCAGTTGCTGG+AGG | + | chr8.3:21381361-21381380 | MS.gene72371:CDS | 50.0% |
| !! | GTTGGAGGAATGCTTGGTGT+TGG | + | chr8.3:21381220-21381239 | MS.gene72371:CDS | 50.0% |
| AACCAAGTGAGGCAGAGGTC+TGG | + | chr8.3:21381148-21381167 | MS.gene72371:CDS | 55.0% | |
| AACCATGGCTGAGGAGGTCA+AGG | + | chr8.3:21382519-21382538 | MS.gene72371:CDS | 55.0% | |
| AGCTTCAACCATGGCTGAGG+AGG | + | chr8.3:21382513-21382532 | MS.gene72371:CDS | 55.0% | |
| ATCCTTGACCTCCTCAGCCA+TGG | - | chr8.3:21382524-21382543 | None:intergenic | 55.0% | |
| CTGAAAGCTCCTCCAGCAAC+TGG | - | chr8.3:21381373-21381392 | None:intergenic | 55.0% | |
| GAAGGTGGCCATGGCATGAA+TGG | - | chr8.3:21384796-21384815 | None:intergenic | 55.0% | |
| TGGGGTCTCTTACTCTTCGG+TGG | + | chr8.3:21384679-21384698 | MS.gene72371:CDS | 55.0% | |
| ! | GGGCAAGGCTTGTTCCATCT+TGG | + | chr8.3:21384189-21384208 | MS.gene72371:CDS | 55.0% |
| CACCAGACCTCTGCCTCACT+TGG | - | chr8.3:21381153-21381172 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 21381115 | 21385038 | 21381115 | ID=MS.gene72371 |
| chr8.3 | mRNA | 21381115 | 21385038 | 21381115 | ID=MS.gene72371.t1;Parent=MS.gene72371 |
| chr8.3 | exon | 21381115 | 21381412 | 21381115 | ID=MS.gene72371.t1.exon1;Parent=MS.gene72371.t1 |
| chr8.3 | CDS | 21381115 | 21381412 | 21381115 | ID=cds.MS.gene72371.t1;Parent=MS.gene72371.t1 |
| chr8.3 | exon | 21381629 | 21381851 | 21381629 | ID=MS.gene72371.t1.exon2;Parent=MS.gene72371.t1 |
| chr8.3 | CDS | 21381629 | 21381851 | 21381629 | ID=cds.MS.gene72371.t1;Parent=MS.gene72371.t1 |
| chr8.3 | exon | 21382318 | 21382648 | 21382318 | ID=MS.gene72371.t1.exon3;Parent=MS.gene72371.t1 |
| chr8.3 | CDS | 21382318 | 21382648 | 21382318 | ID=cds.MS.gene72371.t1;Parent=MS.gene72371.t1 |
| chr8.3 | exon | 21384038 | 21384266 | 21384038 | ID=MS.gene72371.t1.exon4;Parent=MS.gene72371.t1 |
| chr8.3 | CDS | 21384038 | 21384266 | 21384038 | ID=cds.MS.gene72371.t1;Parent=MS.gene72371.t1 |
| chr8.3 | exon | 21384455 | 21385038 | 21384455 | ID=MS.gene72371.t1.exon5;Parent=MS.gene72371.t1 |
| chr8.3 | CDS | 21384455 | 21385038 | 21384455 | ID=cds.MS.gene72371.t1;Parent=MS.gene72371.t1 |
| Gene Sequence |
| Protein sequence |
