Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72615.t1 | XP_003619878.1 | 95.5 | 424 | 19 | 0 | 1 | 424 | 1 | 424 | 7.70E-232 | 812.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72615.t1 | Q9LVI9 | 80.7 | 429 | 75 | 4 | 1 | 424 | 1 | 426 | 3.8e-195 | 682.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72615.t1 | G7KQB6 | 95.5 | 424 | 19 | 0 | 1 | 424 | 1 | 424 | 5.5e-232 | 812.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051960 | MS.gene72615 | 0.805132 | 1.55E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72615.t1 | MTR_6g071210 | 95.519 | 424 | 19 | 0 | 1 | 424 | 1 | 424 | 0.0 | 847 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72615.t1 | AT3G17810 | 80.653 | 429 | 75 | 4 | 1 | 424 | 1 | 426 | 0.0 | 713 |
Find 100 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTGAGTGTTACTGTTAA+TGG | 0.180819 | 6.4:-48630344 | MS.gene72615:CDS |
| GCAGCTGAGTTTATTCTTCT+TGG | 0.200783 | 6.4:-48626248 | MS.gene72615:CDS |
| AGATTGCAAGCCTTTCTTTA+TGG | 0.204573 | 6.4:+48625238 | None:intergenic |
| AACTATTCACTTTCTGCTAT+TGG | 0.259287 | 6.4:-48626293 | MS.gene72615:CDS |
| TGGTATGCCGGAGCGCAAAA+TGG | 0.263705 | 6.4:-48627549 | MS.gene72615:CDS |
| CAGAATTGCTAGTTCTCATC+TGG | 0.278551 | 6.4:+48630465 | None:intergenic |
| TCTGCAAAAGGAGAAATTAT+TGG | 0.311163 | 6.4:-48628053 | MS.gene72615:CDS |
| CAAAGGCTACAGTTCCTGTT+TGG | 0.312936 | 6.4:-48627469 | MS.gene72615:CDS |
| GAACTTAGAGCAACCCTTGC+TGG | 0.357378 | 6.4:+48626598 | None:intergenic |
| CGTCCTGAGCCTTGCGTTGA+GGG | 0.358604 | 6.4:-48626508 | MS.gene72615:CDS |
| GATCCAATCACAAATGGATT+TGG | 0.372017 | 6.4:+48630311 | None:intergenic |
| GCTCTTCTTGAAGAAGTTTG+TGG | 0.375842 | 6.4:-48627503 | MS.gene72615:CDS |
| CGCAAAATGGGTGCTGCTGT+TGG | 0.388137 | 6.4:-48627536 | MS.gene72615:CDS |
| AAGAGCCTTTGATGAAGGTT+GGG | 0.391243 | 6.4:-48630255 | MS.gene72615:CDS |
| GCTATTGGTGGTGTTGAGAC+TGG | 0.396156 | 6.4:-48626278 | MS.gene72615:CDS |
| GAAGCGATGAGAATTCTATC+AGG | 0.397731 | 6.4:+48627951 | None:intergenic |
| CTGCAAAAGGAGAAATTATT+GGG | 0.403065 | 6.4:-48628052 | MS.gene72615:CDS |
| ATGCCAAATCCATTTGTGAT+TGG | 0.408143 | 6.4:-48630314 | MS.gene72615:CDS |
| AAAGGCTACAGTTCCTGTTT+GGG | 0.415981 | 6.4:-48627468 | MS.gene72615:CDS |
| AGAGTTTAAGCAATTAAAAG+AGG | 0.416736 | 6.4:-48627979 | MS.gene72615:CDS |
| CGGCTACGGGCTAATGCAAA+TGG | 0.429884 | 6.4:-48628077 | MS.gene72615:CDS |
| AATCCATTTGTGATTGGATC+AGG | 0.430806 | 6.4:-48630308 | MS.gene72615:CDS |
| CTCTGAAATATCAGTTATGT+TGG | 0.442627 | 6.4:+48627433 | None:intergenic |
| GCAAGGGTTGCTCTAAGTTC+AGG | 0.458325 | 6.4:-48626595 | MS.gene72615:CDS |
| GGAGTCATCTTAGCCCAAAC+AGG | 0.459815 | 6.4:+48627455 | None:intergenic |
| TTCATTGGATTGGTCTAGGA+AGG | 0.462264 | 6.4:-48630432 | MS.gene72615:CDS |
| ATCGATAGAGTCGAACAAAC+TGG | 0.464817 | 6.4:-48627888 | MS.gene72615:CDS |
| AACCCCTCAACGCAAGGCTC+AGG | 0.469526 | 6.4:+48626505 | None:intergenic |
| TATTCACTTTCTGCTATTGG+TGG | 0.475181 | 6.4:-48626290 | MS.gene72615:CDS |
| CATGCACGTCCTAGTAGAGT+TGG | 0.475768 | 6.4:-48630407 | MS.gene72615:CDS |
| GGTATGCCGGAGCGCAAAAT+GGG | 0.481117 | 6.4:-48627548 | MS.gene72615:CDS |
| TGTGAAAGAAAGTGAAAGCA+TGG | 0.486791 | 6.4:-48625189 | MS.gene72615:CDS |
| TCTTGGTGCAAATACTGTCC+AGG | 0.487074 | 6.4:-48626231 | MS.gene72615:intron |
| GCAAAATGGGTGCTGCTGTT+GGG | 0.487510 | 6.4:-48627535 | MS.gene72615:CDS |
| TTTAAATTGCAGGTGTGCAC+TGG | 0.491165 | 6.4:-48625604 | MS.gene72615:intron |
| AATTCTCATCGCTTCAATCA+TGG | 0.491371 | 6.4:-48627943 | MS.gene72615:CDS |
| GGACCTGATCCAATCACAAA+TGG | 0.496107 | 6.4:+48630305 | None:intergenic |
| AAAGAGCCTTTGATGAAGGT+TGG | 0.497584 | 6.4:-48630256 | MS.gene72615:CDS |
| CATTTGCATTAGCCCGTAGC+CGG | 0.499385 | 6.4:+48628078 | None:intergenic |
| CAAAGGAAAGCCATAAAGAA+AGG | 0.501819 | 6.4:-48625248 | MS.gene72615:CDS |
| ATGCACGTCCTAGTAGAGTT+GGG | 0.505524 | 6.4:-48630406 | MS.gene72615:CDS |
| TCTGAAATATCAGTTATGTT+GGG | 0.506589 | 6.4:+48627434 | None:intergenic |
| CTCCTCGTTATGCCCGGCTA+CGG | 0.507185 | 6.4:-48628091 | MS.gene72615:CDS |
| GTGATTGGATCAGGTCCACC+TGG | 0.507691 | 6.4:-48630299 | MS.gene72615:CDS |
| TTTGTTAGGTACTCAACTCC+AGG | 0.511040 | 6.4:-48626404 | MS.gene72615:intron |
| GCAGTTCATCCGATAGCACT+TGG | 0.512671 | 6.4:-48626365 | MS.gene72615:CDS |
| GGCGTTATGATGCATGGCTA+TGG | 0.516244 | 6.4:-48625583 | MS.gene72615:CDS |
| CTCATGTCCTCATGGTATGC+CGG | 0.520822 | 6.4:-48627561 | MS.gene72615:CDS |
| TCCTCGTTATGCCCGGCTAC+GGG | 0.522700 | 6.4:-48628090 | MS.gene72615:CDS |
| AATACAATCATGAGCGTCAT+GGG | 0.525192 | 6.4:-48626550 | MS.gene72615:CDS |
| AAATACAATCATGAGCGTCA+TGG | 0.529657 | 6.4:-48626551 | MS.gene72615:CDS |
| GCTTGCAATCTGATAAAGAC+TGG | 0.530476 | 6.4:-48625226 | MS.gene72615:CDS |
| ACGTCCTGAGCCTTGCGTTG+AGG | 0.531564 | 6.4:-48626509 | MS.gene72615:CDS |
| AGAACTAGCAATTCTGCACC+TGG | 0.533573 | 6.4:-48630458 | MS.gene72615:CDS |
| ATAACCTTCCCAAGTGCTAT+CGG | 0.533776 | 6.4:+48626356 | None:intergenic |
| ATGTAACTCCTCGTTATGCC+CGG | 0.535192 | 6.4:-48628097 | MS.gene72615:CDS |
| GATAAAGACTGGACAGGAGA+TGG | 0.535548 | 6.4:-48625215 | MS.gene72615:CDS |
| AATGCAAATGGATCTGCAAA+AGG | 0.536497 | 6.4:-48628065 | MS.gene72615:CDS |
| CAATCTGATAAAGACTGGAC+AGG | 0.536629 | 6.4:-48625221 | MS.gene72615:CDS |
| ATTTGCATTAGCCCGTAGCC+GGG | 0.536673 | 6.4:+48628079 | None:intergenic |
| TTCTTGAAGAAGTTTGTGGA+TGG | 0.536809 | 6.4:-48627499 | MS.gene72615:CDS |
| ATGAAAAGAGCCTTTGATGA+AGG | 0.541144 | 6.4:-48630260 | MS.gene72615:CDS |
| AGAGCCTTTGATGAAGGTTG+GGG | 0.541495 | 6.4:-48630254 | MS.gene72615:CDS |
| GTTTCTGTTTGTAGCCAGCA+AGG | 0.542946 | 6.4:-48626612 | MS.gene72615:intron |
| TGCTCTAAGTTCAGGATGCG+AGG | 0.553949 | 6.4:-48626587 | MS.gene72615:CDS |
| ATAAACTTCTCATGTCCTCA+TGG | 0.555561 | 6.4:-48627569 | MS.gene72615:CDS |
| TGCACTGGCGTTATGATGCA+TGG | 0.570814 | 6.4:-48625589 | MS.gene72615:CDS |
| CACACACTGACTTGGTGCAA+AGG | 0.573029 | 6.4:-48625289 | MS.gene72615:CDS |
| TTTCTGTTTGTAGCCAGCAA+GGG | 0.576556 | 6.4:-48626611 | MS.gene72615:intron |
| TTAACAGTAACACTCAGATC+AGG | 0.578177 | 6.4:+48630347 | None:intergenic |
| ATAACAGTATAATTAGTCCC+AGG | 0.587291 | 6.4:+48630281 | None:intergenic |
| GTCCTGAGCCTTGCGTTGAG+GGG | 0.588189 | 6.4:-48626507 | MS.gene72615:intron |
| ACCGCCCCAACCTTCATCAA+AGG | 0.598376 | 6.4:+48630250 | None:intergenic |
| ATTGCCAACCCCTCAACGCA+AGG | 0.601265 | 6.4:+48626499 | None:intergenic |
| TGATTGGATCAGGTCCACCT+GGG | 0.601497 | 6.4:-48630298 | MS.gene72615:CDS |
| CATCAATAGAAGATTTCAGA+GGG | 0.602379 | 6.4:-48625504 | MS.gene72615:intron |
| GCCTTTGATGAAGGTTGGGG+CGG | 0.602777 | 6.4:-48630251 | MS.gene72615:CDS |
| AGAGTACAATAAAGCCGCAT+GGG | 0.602901 | 6.4:-48627919 | MS.gene72615:CDS |
| CAACATAACTGATATTTCAG+AGG | 0.605943 | 6.4:-48627432 | MS.gene72615:intron |
| AGAATTGCTAGTTCTCATCT+GGG | 0.607718 | 6.4:+48630466 | None:intergenic |
| AGCAAGAAGCAATTAAGCAA+AGG | 0.608908 | 6.4:-48625265 | MS.gene72615:CDS |
| TCTTTCAACATGGTTTCAAG+CGG | 0.612116 | 6.4:+48627999 | None:intergenic |
| AAGAGTACAATAAAGCCGCA+TGG | 0.612930 | 6.4:-48627920 | MS.gene72615:CDS |
| TTGTGGATGGATAAATGCAA+AGG | 0.617242 | 6.4:-48627486 | MS.gene72615:CDS |
| ACATCAATAGAAGATTTCAG+AGG | 0.619025 | 6.4:-48625505 | MS.gene72615:CDS |
| CAGTTCATCCGATAGCACTT+GGG | 0.631187 | 6.4:-48626364 | MS.gene72615:CDS |
| GTACAATAAAGCCGCATGGG+AGG | 0.631532 | 6.4:-48627916 | MS.gene72615:CDS |
| TCATCCGATAGCACTTGGGA+AGG | 0.632133 | 6.4:-48626360 | MS.gene72615:CDS |
| GCCCGTAGCCGGGCATAACG+AGG | 0.632333 | 6.4:+48628089 | None:intergenic |
| ATCGATAAGCTCCTCCCATG+CGG | 0.636350 | 6.4:+48627905 | None:intergenic |
| AAGCGATGAGAATTCTATCA+GGG | 0.636759 | 6.4:+48627952 | None:intergenic |
| TTGCTTAAACTCTTTCAACA+TGG | 0.637483 | 6.4:+48627989 | None:intergenic |
| GCTCTAAGTTCAGGATGCGA+GGG | 0.640142 | 6.4:-48626586 | MS.gene72615:CDS |
| GAACTAGCAATTCTGCACCT+GGG | 0.647996 | 6.4:-48630457 | MS.gene72615:CDS |
| CAAAAGGAGAAATTATTGGG+TGG | 0.669484 | 6.4:-48628049 | MS.gene72615:CDS |
| ATTGGTGGTGTTGAGACTGG+TGG | 0.671887 | 6.4:-48626275 | MS.gene72615:CDS |
| TTGCGCTCCGGCATACCATG+AGG | 0.673445 | 6.4:+48627554 | None:intergenic |
| GACCAATCCAATGAAAACCC+AGG | 0.680757 | 6.4:+48630440 | None:intergenic |
| ACAGTATAATTAGTCCCAGG+TGG | 0.689168 | 6.4:+48630284 | None:intergenic |
| GTTAGGTACTCAACTCCAGG+TGG | 0.710353 | 6.4:-48626401 | MS.gene72615:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTCATATTTCATTATA+AGG | + | chr6.4:48627386-48627405 | None:intergenic | 10.0% |
| !!! | AAATTTTGAATAAAAATTAC+AGG | - | chr6.4:48630329-48630348 | MS.gene72615:CDS | 10.0% |
| !!! | AATTTTGAATAAAAATTACA+GGG | - | chr6.4:48630330-48630349 | MS.gene72615:CDS | 10.0% |
| !! | AAAATAAATAAATCAGAATC+TGG | - | chr6.4:48628813-48628832 | MS.gene72615:intron | 15.0% |
| !!! | AAAAGAATATCAAAATTTTC+AGG | + | chr6.4:48628060-48628079 | None:intergenic | 15.0% |
| !!! | AATTTGTCAAAAATTTTGTT+AGG | - | chr6.4:48629245-48629264 | MS.gene72615:intron | 15.0% |
| !!! | ATATGATTTTCTTTATTGTT+TGG | + | chr6.4:48630231-48630250 | None:intergenic | 15.0% |
| !!! | ATTTGATTATTTGTTTTGTT+AGG | - | chr6.4:48627516-48627535 | MS.gene72615:CDS | 15.0% |
| !!! | GAAAATTTTGATATTCTTTT+AGG | - | chr6.4:48628060-48628079 | MS.gene72615:CDS | 15.0% |
| !!! | TCAAAACTTTTATAAATACA+TGG | - | chr6.4:48630189-48630208 | MS.gene72615:intron | 15.0% |
| !!! | TGAAAAACAAATATCATTTT+TGG | + | chr6.4:48628453-48628472 | None:intergenic | 15.0% |
| !!! | TTATTGGTTAAAATTCATAT+GGG | + | chr6.4:48626972-48626991 | None:intergenic | 15.0% |
| !!! | TTTATTGGTTAAAATTCATA+TGG | + | chr6.4:48626973-48626992 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTCACAAAATTAA+AGG | - | chr6.4:48628462-48628481 | MS.gene72615:intron | 15.0% |
| !! | AAATAATGATTTCACGAATT+CGG | - | chr6.4:48625555-48625574 | MS.gene72615:CDS | 20.0% |
| !! | AATATGTCACAGAAAAAAAA+TGG | - | chr6.4:48629856-48629875 | MS.gene72615:intron | 20.0% |
| !! | TTCTTAAACACCTTAAAATA+TGG | + | chr6.4:48628281-48628300 | None:intergenic | 20.0% |
| !!! | GTTCTTTTAACCATATTTTA+AGG | - | chr6.4:48628268-48628287 | MS.gene72615:intron | 20.0% |
| !!! | TTGTTCCATTTTTGTTTTTT+GGG | + | chr6.4:48626190-48626209 | None:intergenic | 20.0% |
| !!! | TTTCCAATACACTTTTTTAT+CGG | - | chr6.4:48626885-48626904 | MS.gene72615:intron | 20.0% |
| !!! | TTTGTTCCATTTTTGTTTTT+TGG | + | chr6.4:48626191-48626210 | None:intergenic | 20.0% |
| ! | AAAATATCGAGCTTGAAATA+TGG | + | chr6.4:48628785-48628804 | None:intergenic | 25.0% |
| ! | AACAGTTTCTCAAAATAAGT+TGG | - | chr6.4:48628579-48628598 | MS.gene72615:intron | 25.0% |
| ! | AATATATCACATAGAGCTTA+TGG | + | chr6.4:48625948-48625967 | None:intergenic | 25.0% |
| ! | AGAGTTTAAGCAATTAAAAG+AGG | - | chr6.4:48627684-48627703 | MS.gene72615:intron | 25.0% |
| ! | ATGTGAATCCCATATAAATT+TGG | - | chr6.4:48626936-48626955 | MS.gene72615:intron | 25.0% |
| ! | ATTAAGGAAAAAACTGTCTT+TGG | + | chr6.4:48627050-48627069 | None:intergenic | 25.0% |
| ! | CACATTGTTTAGAGAAAAAA+GGG | + | chr6.4:48626775-48626794 | None:intergenic | 25.0% |
| ! | CTTGATTAATGTAATTGTCA+TGG | - | chr6.4:48625528-48625547 | MS.gene72615:CDS | 25.0% |
| ! | GTTAAAAGACAAATCAAGAT+CGG | - | chr6.4:48628699-48628718 | MS.gene72615:intron | 25.0% |
| ! | TATAGTTCAACCTCTTTAAA+TGG | - | chr6.4:48627897-48627916 | MS.gene72615:CDS | 25.0% |
| ! | TCAATATCAAGGATCAAATA+GGG | + | chr6.4:48629690-48629709 | None:intergenic | 25.0% |
| ! | TCACATTGTTTAGAGAAAAA+AGG | + | chr6.4:48626776-48626795 | None:intergenic | 25.0% |
| ! | TCATATTTCATTATAAGGTC+AGG | + | chr6.4:48627381-48627400 | None:intergenic | 25.0% |
| ! | TTATTAGTAATACATGTGCA+TGG | - | chr6.4:48625794-48625813 | MS.gene72615:intron | 25.0% |
| ! | TTCAATATCAAGGATCAAAT+AGG | + | chr6.4:48629691-48629710 | None:intergenic | 25.0% |
| ! | TTGTCAAATTACAGATATAG+TGG | + | chr6.4:48627247-48627266 | None:intergenic | 25.0% |
| ! | TTGTCGAATTATCAAATTTC+TGG | - | chr6.4:48628309-48628328 | MS.gene72615:intron | 25.0% |
| !! | ATTGTTTCTTCATAATGTTG+GGG | - | chr6.4:48625693-48625712 | MS.gene72615:intron | 25.0% |
| !! | CATTGTTTCTTCATAATGTT+GGG | - | chr6.4:48625692-48625711 | MS.gene72615:intron | 25.0% |
| !! | TAACCGATAAAAAAGTGTAT+TGG | + | chr6.4:48626891-48626910 | None:intergenic | 25.0% |
| !! | TCATTGTTTCTTCATAATGT+TGG | - | chr6.4:48625691-48625710 | MS.gene72615:intron | 25.0% |
| !! | TCTGAAATATCAGTTATGTT+GGG | + | chr6.4:48628232-48628251 | None:intergenic | 25.0% |
| !! | TGCTTTTCTGACTATTAAAA+TGG | - | chr6.4:48626735-48626754 | MS.gene72615:intron | 25.0% |
| !! | TGTTTAAAGTTTAAATGCAC+AGG | + | chr6.4:48628488-48628507 | None:intergenic | 25.0% |
| !! | TTATCGGTTAAATTTCACAT+CGG | - | chr6.4:48626901-48626920 | MS.gene72615:intron | 25.0% |
| !! | TTTTCTTTATTGTTTGGATG+AGG | + | chr6.4:48630225-48630244 | None:intergenic | 25.0% |
| !!! | ATTTTAAGGTGTTTAAGAAG+TGG | - | chr6.4:48628282-48628301 | MS.gene72615:intron | 25.0% |
| !!! | TAGTTCGGTTTTTAAAACAT+AGG | + | chr6.4:48627850-48627869 | None:intergenic | 25.0% |
| !!! | TCAATACAAAAGTGCTTAAA+TGG | - | chr6.4:48626542-48626561 | MS.gene72615:CDS | 25.0% |
| !!! | TCATAAAAGTGTTGATGTTT+TGG | + | chr6.4:48626484-48626503 | None:intergenic | 25.0% |
| !!! | TTGTGTAGAAAGTCATTTTT+AGG | + | chr6.4:48628665-48628684 | None:intergenic | 25.0% |
| AACCACCCAAAAAACAAAAA+TGG | - | chr6.4:48626182-48626201 | MS.gene72615:intron | 30.0% | |
| AACTATTCACTTTCTGCTAT+TGG | - | chr6.4:48629370-48629389 | MS.gene72615:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr6.4:48625924-48625943 | None:intergenic | 30.0% | |
| AATTCACATCTGCTAAGTAA+AGG | + | chr6.4:48628986-48629005 | None:intergenic | 30.0% | |
| ACATCAATAGAAGATTTCAG+AGG | - | chr6.4:48630158-48630177 | MS.gene72615:intron | 30.0% | |
| ACGACTTCAATATAAAGTGT+TGG | + | chr6.4:48629492-48629511 | None:intergenic | 30.0% | |
| ACTTATGATACAATGCTTAC+AGG | - | chr6.4:48625881-48625900 | MS.gene72615:intron | 30.0% | |
| AGAACAATTTCACATGCAAA+AGG | + | chr6.4:48628957-48628976 | None:intergenic | 30.0% | |
| AGCAAACAGAACAGTTATAA+CGG | + | chr6.4:48627421-48627440 | None:intergenic | 30.0% | |
| ATAACAGTATAATTAGTCCC+AGG | + | chr6.4:48625385-48625404 | None:intergenic | 30.0% | |
| ATAACTGATATTTCAGAGGT+TGG | - | chr6.4:48628235-48628254 | MS.gene72615:intron | 30.0% | |
| ATTCACATCTGCTAAGTAAA+GGG | + | chr6.4:48628985-48629004 | None:intergenic | 30.0% | |
| CAAAACAAAACCACAAAAGA+TGG | + | chr6.4:48626577-48626596 | None:intergenic | 30.0% | |
| CAACATAACTGATATTTCAG+AGG | - | chr6.4:48628231-48628250 | MS.gene72615:intron | 30.0% | |
| CATCAATAGAAGATTTCAGA+GGG | - | chr6.4:48630159-48630178 | MS.gene72615:intron | 30.0% | |
| CTCACTTACATCAAATTCAT+TGG | - | chr6.4:48629187-48629206 | MS.gene72615:intron | 30.0% | |
| CTGCAAAAGGAGAAATTATT+GGG | - | chr6.4:48627611-48627630 | MS.gene72615:intron | 30.0% | |
| GAACAATTTCACATGCAAAA+GGG | + | chr6.4:48628956-48628975 | None:intergenic | 30.0% | |
| GGAAAAAAAATACACACAAG+GGG | - | chr6.4:48626114-48626133 | MS.gene72615:intron | 30.0% | |
| GGGAAAAAAAATACACACAA+GGG | - | chr6.4:48626113-48626132 | MS.gene72615:intron | 30.0% | |
| TAACTGTACGTAGTAAAAAC+TGG | - | chr6.4:48627957-48627976 | MS.gene72615:CDS | 30.0% | |
| TAGGAACTCTTCAGATATTT+GGG | + | chr6.4:48628646-48628665 | None:intergenic | 30.0% | |
| TATTGTTTGGATGAGGAAAT+TGG | + | chr6.4:48630218-48630237 | None:intergenic | 30.0% | |
| TCTGCAAAAGGAGAAATTAT+TGG | - | chr6.4:48627610-48627629 | MS.gene72615:intron | 30.0% | |
| TGAATCCCATATAAATTTGG+CGG | - | chr6.4:48626939-48626958 | MS.gene72615:intron | 30.0% | |
| TGGGAAAAAAAATACACACA+AGG | - | chr6.4:48626112-48626131 | MS.gene72615:intron | 30.0% | |
| TTAGGAACTCTTCAGATATT+TGG | + | chr6.4:48628647-48628666 | None:intergenic | 30.0% | |
| TTGCATGACTTATGTTGAAA+GGG | - | chr6.4:48626594-48626613 | MS.gene72615:CDS | 30.0% | |
| TTGCTTAAACTCTTTCAACA+TGG | + | chr6.4:48627677-48627696 | None:intergenic | 30.0% | |
| TTTGCATGACTTATGTTGAA+AGG | - | chr6.4:48626593-48626612 | MS.gene72615:CDS | 30.0% | |
| ! | ATAACTGTTCTGTTTGCTTT+TGG | - | chr6.4:48627423-48627442 | MS.gene72615:intron | 30.0% |
| ! | GATGATCTTGTTTAAATTGC+AGG | - | chr6.4:48630049-48630068 | MS.gene72615:intron | 30.0% |
| ! | TAACCAATAAAAGAGTGTGT+TGG | - | chr6.4:48626982-48627001 | MS.gene72615:intron | 30.0% |
| ! | TACTCATGTATTGTTTCTTG+AGG | - | chr6.4:48626683-48626702 | MS.gene72615:intron | 30.0% |
| ! | TTTCCAACACACTCTTTTAT+TGG | + | chr6.4:48626988-48627007 | None:intergenic | 30.0% |
| !! | AAATATAGGAAGCACTAACA+CGG | + | chr6.4:48629586-48629605 | None:intergenic | 30.0% |
| !! | AAGTTGAGTGTTTGATTTGT+TGG | - | chr6.4:48625752-48625771 | MS.gene72615:intron | 30.0% |
| !! | CTCTGAAATATCAGTTATGT+TGG | + | chr6.4:48628233-48628252 | None:intergenic | 30.0% |
| !! | TACAAAAGTGCTTAAATGGT+TGG | - | chr6.4:48626546-48626565 | MS.gene72615:CDS | 30.0% |
| !! | TATAAAGTGTTGGTGTTACA+AGG | + | chr6.4:48629482-48629501 | None:intergenic | 30.0% |
| !! | TCAAGACGGACTAAAAATAT+AGG | + | chr6.4:48629600-48629619 | None:intergenic | 30.0% |
| !!! | ACATTTTGTTTGTACCGATT+AGG | - | chr6.4:48626627-48626646 | MS.gene72615:intron | 30.0% |
| !!! | GTTTTTTGGGTGGTTTTTAA+GGG | + | chr6.4:48626177-48626196 | None:intergenic | 30.0% |
| !!! | TAAAAGTGTTGATGTTTTGG+TGG | + | chr6.4:48626481-48626500 | None:intergenic | 30.0% |
| !!! | TGTTTTTTGGGTGGTTTTTA+AGG | + | chr6.4:48626178-48626197 | None:intergenic | 30.0% |
| !!! | TTCCATTTTTGTTTTTTGGG+TGG | + | chr6.4:48626187-48626206 | None:intergenic | 30.0% |
| !!! | TTTTTTGGGTGGTTTTTAAG+GGG | + | chr6.4:48626176-48626195 | None:intergenic | 30.0% |
| AAATACAATCATGAGCGTCA+TGG | - | chr6.4:48629112-48629131 | MS.gene72615:intron | 35.0% | |
| AAATACACACAAGGGGAAAT+TGG | - | chr6.4:48626121-48626140 | MS.gene72615:intron | 35.0% | |
| AAGCGATGAGAATTCTATCA+GGG | + | chr6.4:48627714-48627733 | None:intergenic | 35.0% | |
| AATACAATCATGAGCGTCAT+GGG | - | chr6.4:48629113-48629132 | MS.gene72615:intron | 35.0% | |
| AATCCATTTGTGATTGGATC+AGG | - | chr6.4:48625355-48625374 | MS.gene72615:intron | 35.0% | |
| AATGCAAATGGATCTGCAAA+AGG | - | chr6.4:48627598-48627617 | MS.gene72615:intron | 35.0% | |
| AATGTGAGAGTGAGTTGTAA+AGG | - | chr6.4:48626789-48626808 | MS.gene72615:intron | 35.0% | |
| AATTCTCATCGCTTCAATCA+TGG | - | chr6.4:48627720-48627739 | MS.gene72615:intron | 35.0% | |
| AGATTGCAAGCCTTTCTTTA+TGG | + | chr6.4:48630428-48630447 | None:intergenic | 35.0% | |
| AGCAAGAAGCAATTAAGCAA+AGG | - | chr6.4:48630398-48630417 | MS.gene72615:CDS | 35.0% | |
| ATAAACTTCTCATGTCCTCA+TGG | - | chr6.4:48628094-48628113 | MS.gene72615:CDS | 35.0% | |
| ATGAAAAGAGCCTTTGATGA+AGG | - | chr6.4:48625403-48625422 | MS.gene72615:intron | 35.0% | |
| ATGAGATTCTTGCACTCAAT+AGG | - | chr6.4:48629888-48629907 | MS.gene72615:intron | 35.0% | |
| ATGCCAAATCCATTTGTGAT+TGG | - | chr6.4:48625349-48625368 | MS.gene72615:intron | 35.0% | |
| ATGGGATTCACATGATTTGA+TGG | + | chr6.4:48626929-48626948 | None:intergenic | 35.0% | |
| CAAAAGGAGAAATTATTGGG+TGG | - | chr6.4:48627614-48627633 | MS.gene72615:intron | 35.0% | |
| CAAAGGAAAGCCATAAAGAA+AGG | - | chr6.4:48630415-48630434 | MS.gene72615:CDS | 35.0% | |
| GAATCCCATATAAATTTGGC+GGG | - | chr6.4:48626940-48626959 | MS.gene72615:intron | 35.0% | |
| GAGTTGTAAGATGTGTTTCT+TGG | - | chr6.4:48627797-48627816 | MS.gene72615:intron | 35.0% | |
| GATCTGTATGATGCTAATTG+TGG | - | chr6.4:48626705-48626724 | MS.gene72615:intron | 35.0% | |
| TACCATTGTCAGTATCAAGA+CGG | + | chr6.4:48629614-48629633 | None:intergenic | 35.0% | |
| TATCAAGGATCAAATAGGGA+AGG | + | chr6.4:48629686-48629705 | None:intergenic | 35.0% | |
| TATTCACTTTCTGCTATTGG+TGG | - | chr6.4:48629373-48629392 | MS.gene72615:intron | 35.0% | |
| TCCCTTTAACAAGGAGAAAA+GGG | + | chr6.4:48629660-48629679 | None:intergenic | 35.0% | |
| TCTTTCAACATGGTTTCAAG+CGG | + | chr6.4:48627667-48627686 | None:intergenic | 35.0% | |
| TGAGATTCTTGCACTCAATA+GGG | - | chr6.4:48629889-48629908 | MS.gene72615:intron | 35.0% | |
| TGGGATTCACATGATTTGAT+GGG | + | chr6.4:48626928-48626947 | None:intergenic | 35.0% | |
| TGGTAGGATATTCTTTCCTT+TGG | - | chr6.4:48629629-48629648 | MS.gene72615:intron | 35.0% | |
| TGTAATACAACTGAATGCAC+AGG | + | chr6.4:48627152-48627171 | None:intergenic | 35.0% | |
| TGTAGTCACATTCAATCACT+TGG | - | chr6.4:48629557-48629576 | MS.gene72615:intron | 35.0% | |
| TGTGAAAGAAAGTGAAAGCA+TGG | - | chr6.4:48630474-48630493 | MS.gene72615:CDS | 35.0% | |
| TTAACAGTAACACTCAGATC+AGG | + | chr6.4:48625319-48625338 | None:intergenic | 35.0% | |
| TTCCCTTTAACAAGGAGAAA+AGG | + | chr6.4:48629661-48629680 | None:intergenic | 35.0% | |
| TTCTTGAAGAAGTTTGTGGA+TGG | - | chr6.4:48628164-48628183 | MS.gene72615:intron | 35.0% | |
| TTGATCCTTGATATTGAACG+TGG | - | chr6.4:48629693-48629712 | MS.gene72615:intron | 35.0% | |
| TTGTGGATGGATAAATGCAA+AGG | - | chr6.4:48628177-48628196 | MS.gene72615:intron | 35.0% | |
| TTTGTTCAAATTCCTCTGTG+CGG | - | chr6.4:48627206-48627225 | MS.gene72615:intron | 35.0% | |
| ! | AACGTAAAGCTTGTTTGGTT+GGG | + | chr6.4:48628923-48628942 | None:intergenic | 35.0% |
| ! | AATGTGTTTGAGAGTGTGTT+GGG | + | chr6.4:48626864-48626883 | None:intergenic | 35.0% |
| ! | ACGTAGTAAAAACTGGTTCA+AGG | - | chr6.4:48627964-48627983 | MS.gene72615:CDS | 35.0% |
| ! | ACTACGTACAGTTACTTTGA+TGG | + | chr6.4:48627951-48627970 | None:intergenic | 35.0% |
| ! | AGAAGAACGTAAAGCTTGTT+TGG | + | chr6.4:48628928-48628947 | None:intergenic | 35.0% |
| ! | AGAATTGCTAGTTCTCATCT+GGG | + | chr6.4:48625200-48625219 | None:intergenic | 35.0% |
| ! | ATTTTGAACCCAACTCTACT+AGG | + | chr6.4:48625268-48625287 | None:intergenic | 35.0% |
| ! | GATCCAATCACAAATGGATT+TGG | + | chr6.4:48625355-48625374 | None:intergenic | 35.0% |
| ! | GATCTGAGTGTTACTGTTAA+TGG | - | chr6.4:48625319-48625338 | MS.gene72615:intron | 35.0% |
| ! | GTTGGTATTTCCATCTTTTG+TGG | - | chr6.4:48626564-48626583 | MS.gene72615:CDS | 35.0% |
| ! | TTACTTTGATGGTTCAATCG+CGG | + | chr6.4:48627940-48627959 | None:intergenic | 35.0% |
| !! | GGTTTGTTTTTCAAAGGGTT+TGG | + | chr6.4:48626404-48626423 | None:intergenic | 35.0% |
| !! | GGTTTTTAAGGGGTTTTTGT+TGG | + | chr6.4:48626166-48626185 | None:intergenic | 35.0% |
| !! | TGAGTGTTTGATTTGTTGGT+GGG | - | chr6.4:48625756-48625775 | MS.gene72615:intron | 35.0% |
| !! | TGTTTGTACCGATTAGGAAA+GGG | - | chr6.4:48626633-48626652 | MS.gene72615:intron | 35.0% |
| !! | TTGAGTGTTTGATTTGTTGG+TGG | - | chr6.4:48625755-48625774 | MS.gene72615:intron | 35.0% |
| !! | TTGTAAAGGAGTCTTGTTCT+TGG | - | chr6.4:48626803-48626822 | MS.gene72615:intron | 35.0% |
| !! | TTGTTTGTACCGATTAGGAA+AGG | - | chr6.4:48626632-48626651 | MS.gene72615:intron | 35.0% |
| !! | TTTTACTACACACACTGACT+TGG | - | chr6.4:48630366-48630385 | MS.gene72615:CDS | 35.0% |
| !!! | AGGTCGGTTTGTTTTTCAAA+GGG | + | chr6.4:48626409-48626428 | None:intergenic | 35.0% |
| !!! | CAGGTCAGATTTTTCAAGAT+AGG | + | chr6.4:48628041-48628060 | None:intergenic | 35.0% |
| AAAACCGAACCAGACATCAA+CGG | + | chr6.4:48627996-48628015 | None:intergenic | 40.0% | |
| AAAGAGCCTTTGATGAAGGT+TGG | - | chr6.4:48625407-48625426 | MS.gene72615:intron | 40.0% | |
| AAAGGCTACAGTTCCTGTTT+GGG | - | chr6.4:48628195-48628214 | MS.gene72615:intron | 40.0% | |
| AAGAGCCTTTGATGAAGGTT+GGG | - | chr6.4:48625408-48625427 | MS.gene72615:intron | 40.0% | |
| AAGTAACCAGGCAAAGAATC+AGG | + | chr6.4:48629723-48629742 | None:intergenic | 40.0% | |
| AATTGGTTGCCGTACAAACA+TGG | - | chr6.4:48626138-48626157 | MS.gene72615:intron | 40.0% | |
| ACAGTATAATTAGTCCCAGG+TGG | + | chr6.4:48625382-48625401 | None:intergenic | 40.0% | |
| AGAGTACAATAAAGCCGCAT+GGG | - | chr6.4:48627744-48627763 | MS.gene72615:intron | 40.0% | |
| AGTAACCAGGCAAAGAATCA+GGG | + | chr6.4:48629722-48629741 | None:intergenic | 40.0% | |
| AGTAGTACATCAGTTGCCAT+TGG | - | chr6.4:48628743-48628762 | MS.gene72615:intron | 40.0% | |
| AGTTGCCATTGGATCAAGAT+CGG | - | chr6.4:48628754-48628773 | MS.gene72615:intron | 40.0% | |
| ATAACCTTCCCAAGTGCTAT+CGG | + | chr6.4:48629310-48629329 | None:intergenic | 40.0% | |
| ATCGATAGAGTCGAACAAAC+TGG | - | chr6.4:48627775-48627794 | MS.gene72615:intron | 40.0% | |
| ATTGTCCGATCTTGATCCAA+TGG | + | chr6.4:48628762-48628781 | None:intergenic | 40.0% | |
| CAATCTGATAAAGACTGGAC+AGG | - | chr6.4:48630442-48630461 | MS.gene72615:CDS | 40.0% | |
| CCATATAAATTTGGCGGGAT+GGG | - | chr6.4:48626945-48626964 | MS.gene72615:intron | 40.0% | |
| CCATCCCGCCAAATTTATAT+GGG | + | chr6.4:48626947-48626966 | None:intergenic | 40.0% | |
| CCCTTTAACAAGGAGAAAAG+GGG | + | chr6.4:48629659-48629678 | None:intergenic | 40.0% | |
| CTCTTTAAATGGCCTGAACA+AGG | - | chr6.4:48627908-48627927 | MS.gene72615:CDS | 40.0% | |
| CTTGTTCAGGCCATTTAAAG+AGG | + | chr6.4:48627910-48627929 | None:intergenic | 40.0% | |
| GAAGCGATGAGAATTCTATC+AGG | + | chr6.4:48627715-48627734 | None:intergenic | 40.0% | |
| GAATACTGCATTGCAGATTG+CGG | - | chr6.4:48625585-48625604 | MS.gene72615:CDS | 40.0% | |
| GAGGTTGAACTATAACACGA+AGG | + | chr6.4:48627891-48627910 | None:intergenic | 40.0% | |
| GATTCTTTGCCTGGTTACTT+GGG | - | chr6.4:48629723-48629742 | MS.gene72615:intron | 40.0% | |
| GCAGCTGAGTTTATTCTTCT+TGG | - | chr6.4:48629415-48629434 | MS.gene72615:intron | 40.0% | |
| GCTCTTCTTGAAGAAGTTTG+TGG | - | chr6.4:48628160-48628179 | MS.gene72615:intron | 40.0% | |
| GCTTGCAATCTGATAAAGAC+TGG | - | chr6.4:48630437-48630456 | MS.gene72615:CDS | 40.0% | |
| GGTGATTCTTTCATCATACC+TGG | + | chr6.4:48629453-48629472 | None:intergenic | 40.0% | |
| GTCTTGATACTGACAATGGT+AGG | - | chr6.4:48629613-48629632 | MS.gene72615:intron | 40.0% | |
| TCAGAATCTGGTGTACCATT+TGG | - | chr6.4:48628825-48628844 | MS.gene72615:intron | 40.0% | |
| TGATTCTTTGCCTGGTTACT+TGG | - | chr6.4:48629722-48629741 | MS.gene72615:intron | 40.0% | |
| TTACACATTGTTCTCAACCG+CGG | - | chr6.4:48627167-48627186 | MS.gene72615:intron | 40.0% | |
| TTGTTCTTGGCTTCTTGCTA+TGG | - | chr6.4:48626816-48626835 | MS.gene72615:intron | 40.0% | |
| TTGTTGGAGCCATGTTTGTA+CGG | + | chr6.4:48626150-48626169 | None:intergenic | 40.0% | |
| TTTAAATTGCAGGTGTGCAC+TGG | - | chr6.4:48630059-48630078 | MS.gene72615:intron | 40.0% | |
| TTTAACAAGGAGAAAAGGGG+TGG | + | chr6.4:48629656-48629675 | None:intergenic | 40.0% | |
| TTTCTGTTTGTAGCCAGCAA+GGG | - | chr6.4:48629052-48629071 | MS.gene72615:intron | 40.0% | |
| TTTGTTAGGTACTCAACTCC+AGG | - | chr6.4:48629259-48629278 | MS.gene72615:intron | 40.0% | |
| ! | AAGAGTACAATAAAGCCGCA+TGG | - | chr6.4:48627743-48627762 | MS.gene72615:intron | 40.0% |
| ! | ACCCCTTTTCTCCTTGTTAA+AGG | - | chr6.4:48629655-48629674 | MS.gene72615:intron | 40.0% |
| ! | ACGTAAAGCTTGTTTGGTTG+GGG | + | chr6.4:48628922-48628941 | None:intergenic | 40.0% |
| ! | CAGAATTGCTAGTTCTCATC+TGG | + | chr6.4:48625201-48625220 | None:intergenic | 40.0% |
| ! | CCCCTTTTCTCCTTGTTAAA+GGG | - | chr6.4:48629656-48629675 | MS.gene72615:intron | 40.0% |
| ! | CTAACGAAAGCATGCTTAGT+GGG | - | chr6.4:48629917-48629936 | MS.gene72615:intron | 40.0% |
| ! | GAACGTAAAGCTTGTTTGGT+TGG | + | chr6.4:48628924-48628943 | None:intergenic | 40.0% |
| ! | GAATGTGTTTGAGAGTGTGT+TGG | + | chr6.4:48626865-48626884 | None:intergenic | 40.0% |
| ! | TAACGAAAGCATGCTTAGTG+GGG | - | chr6.4:48629918-48629937 | MS.gene72615:intron | 40.0% |
| ! | TGTCTGAAACTGACACATGT+CGG | + | chr6.4:48629524-48629543 | None:intergenic | 40.0% |
| ! | TTTGATAGCCTGTTGCTCTT+CGG | - | chr6.4:48629971-48629990 | MS.gene72615:intron | 40.0% |
| !! | GGAAGGTATTCCCTTTAACA+AGG | + | chr6.4:48629669-48629688 | None:intergenic | 40.0% |
| !! | TTCATTGGATTGGTCTAGGA+AGG | - | chr6.4:48625231-48625250 | MS.gene72615:CDS | 40.0% |
| !!! | CAGGTCGGTTTGTTTTTCAA+AGG | + | chr6.4:48626410-48626429 | None:intergenic | 40.0% |
| !!! | GGTTTTCATTGGATTGGTCT+AGG | - | chr6.4:48625227-48625246 | MS.gene72615:CDS | 40.0% |
| !!! | TGGCATCTGTTTTTGTTGTG+CGG | + | chr6.4:48626336-48626355 | None:intergenic | 40.0% |
| AAACCGAACCAGACATCAAC+GGG | + | chr6.4:48627995-48628014 | None:intergenic | 45.0% | |
| AACCGAACTAGACATCGATC+CGG | - | chr6.4:48627860-48627879 | MS.gene72615:intron | 45.0% | |
| ACCACTATTCCCAAGTAACC+AGG | + | chr6.4:48629735-48629754 | None:intergenic | 45.0% | |
| AGAACTAGCAATTCTGCACC+TGG | - | chr6.4:48625205-48625224 | MS.gene72615:CDS | 45.0% | |
| AGAGCCTTTGATGAAGGTTG+GGG | - | chr6.4:48625409-48625428 | MS.gene72615:intron | 45.0% | |
| ATCTTCGGCTGCTCTTTAGA+CGG | + | chr6.4:48626287-48626306 | None:intergenic | 45.0% | |
| ATGCACGTCCTAGTAGAGTT+GGG | - | chr6.4:48625257-48625276 | MS.gene72615:CDS | 45.0% | |
| ATGTAACTCCTCGTTATGCC+CGG | - | chr6.4:48627566-48627585 | MS.gene72615:CDS | 45.0% | |
| ATTGCAGATTGCGGTCTTTG+CGG | - | chr6.4:48625594-48625613 | MS.gene72615:CDS | 45.0% | |
| CAAAGGCTACAGTTCCTGTT+TGG | - | chr6.4:48628194-48628213 | MS.gene72615:intron | 45.0% | |
| CAAGACGCACTAATAAGCTC+GGG | - | chr6.4:48626089-48626108 | MS.gene72615:intron | 45.0% | |
| CAATCTTCCTTCTGCTGTCT+CGG | + | chr6.4:48626439-48626458 | None:intergenic | 45.0% | |
| CAGTTCATCCGATAGCACTT+GGG | - | chr6.4:48629299-48629318 | MS.gene72615:intron | 45.0% | |
| CCACTAAGCATGCTTTCGTT+AGG | + | chr6.4:48629919-48629938 | None:intergenic | 45.0% | |
| CCCATATAAATTTGGCGGGA+TGG | - | chr6.4:48626944-48626963 | MS.gene72615:intron | 45.0% | |
| CCCATCCCGCCAAATTTATA+TGG | + | chr6.4:48626948-48626967 | None:intergenic | 45.0% | |
| CTGTTCACATGTGTCTTGGA+GGG | + | chr6.4:48626368-48626387 | None:intergenic | 45.0% | |
| CTTATTAGTGCGTCTTGCAC+GGG | + | chr6.4:48626086-48626105 | None:intergenic | 45.0% | |
| GAACTAGCAATTCTGCACCT+GGG | - | chr6.4:48625206-48625225 | MS.gene72615:CDS | 45.0% | |
| GACCAATCCAATGAAAACCC+AGG | + | chr6.4:48625226-48625245 | None:intergenic | 45.0% | |
| GATAAAGACTGGACAGGAGA+TGG | - | chr6.4:48630448-48630467 | MS.gene72615:CDS | 45.0% | |
| GCAAACAACTCGCTGTATCT+CGG | - | chr6.4:48627084-48627103 | MS.gene72615:intron | 45.0% | |
| GCAAGACGCACTAATAAGCT+CGG | - | chr6.4:48626088-48626107 | MS.gene72615:intron | 45.0% | |
| GCTCTAGCACTATAGAGTAG+CGG | + | chr6.4:48627320-48627339 | None:intergenic | 45.0% | |
| GCTTATTAGTGCGTCTTGCA+CGG | + | chr6.4:48626087-48626106 | None:intergenic | 45.0% | |
| GGACCTGATCCAATCACAAA+TGG | + | chr6.4:48625361-48625380 | None:intergenic | 45.0% | |
| GGGATCCACGTTCAATATCA+AGG | + | chr6.4:48629701-48629720 | None:intergenic | 45.0% | |
| GTAACCAGGCAAAGAATCAG+GGG | + | chr6.4:48629721-48629740 | None:intergenic | 45.0% | |
| GTCCGTCTTGATACTGACAA+TGG | - | chr6.4:48629609-48629628 | MS.gene72615:intron | 45.0% | |
| GTTGTTGGATCGAGATCAGA+TGG | + | chr6.4:48628852-48628871 | None:intergenic | 45.0% | |
| GTTTCTGTTTGTAGCCAGCA+AGG | - | chr6.4:48629051-48629070 | MS.gene72615:intron | 45.0% | |
| TCGAGATCAGATGGTCCAAA+TGG | + | chr6.4:48628843-48628862 | None:intergenic | 45.0% | |
| TCGCATGACCCTTTCCTAAT+CGG | + | chr6.4:48626644-48626663 | None:intergenic | 45.0% | |
| TGGGCTCTTGGTTGTATCTT+CGG | + | chr6.4:48626302-48626321 | None:intergenic | 45.0% | |
| TGTGACTACATGTGTCGTGT+CGG | + | chr6.4:48629547-48629566 | None:intergenic | 45.0% | |
| ! | CACCTGGGTTTTCATTGGAT+TGG | - | chr6.4:48625221-48625240 | MS.gene72615:CDS | 45.0% |
| ! | CCTAACGAAAGCATGCTTAG+TGG | - | chr6.4:48629916-48629935 | MS.gene72615:intron | 45.0% |
| ! | CGTAAAGCTTGTTTGGTTGG+GGG | + | chr6.4:48628921-48628940 | None:intergenic | 45.0% |
| ! | GCTTTTGCAGAATAACCACC+TGG | + | chr6.4:48629280-48629299 | None:intergenic | 45.0% |
| ! | TCTTGGTGCAAATACTGTCC+AGG | - | chr6.4:48629432-48629451 | MS.gene72615:intron | 45.0% |
| ! | TTCTGCACCTGGGTTTTCAT+TGG | - | chr6.4:48625216-48625235 | MS.gene72615:CDS | 45.0% |
| ! | TTTTCAAAGGGTTTGGCTGC+TGG | + | chr6.4:48626397-48626416 | None:intergenic | 45.0% |
| !! | GAACAAAAGAGTACTGACGC+TGG | - | chr6.4:48626204-48626223 | MS.gene72615:intron | 45.0% |
| !! | GTCTTGGAGGGTTTTGATCT+TGG | + | chr6.4:48626356-48626375 | None:intergenic | 45.0% |
| !! | TCGCGGTTTTATCCTTGTTC+AGG | + | chr6.4:48627923-48627942 | None:intergenic | 45.0% |
| !!! | AGTGTTGATGTTTTGGTGGC+AGG | + | chr6.4:48626477-48626496 | None:intergenic | 45.0% |
| !!! | ATCTGTTTTTGTTGTGCGGG+AGG | + | chr6.4:48626332-48626351 | None:intergenic | 45.0% |
| !!! | GGCATCTGTTTTTGTTGTGC+GGG | + | chr6.4:48626335-48626354 | None:intergenic | 45.0% |
| !!! | GTGTTGATGTTTTGGTGGCA+GGG | + | chr6.4:48626476-48626495 | None:intergenic | 45.0% |
| !!! | TATTTTATTTTTTTTTGAAT+TGG | - | chr6.4:48626039-48626058 | MS.gene72615:intron | 5.0% |
| AACTCGCTGTATCTCGGTTG+GGG | - | chr6.4:48627090-48627109 | MS.gene72615:intron | 50.0% | |
| AACTGAATGCACAGGAGACG+AGG | + | chr6.4:48627144-48627163 | None:intergenic | 50.0% | |
| ACAACTCGCTGTATCTCGGT+TGG | - | chr6.4:48627088-48627107 | MS.gene72615:intron | 50.0% | |
| ACCGCGGATCGCAAAAATAG+CGG | - | chr6.4:48627183-48627202 | MS.gene72615:intron | 50.0% | |
| ACGCACTAATAAGCTCGGGT+GGG | - | chr6.4:48626093-48626112 | MS.gene72615:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr6.4:48630256-48630275 | None:intergenic | 50.0% | |
| ATCGATAAGCTCCTCCCATG+CGG | + | chr6.4:48627761-48627780 | None:intergenic | 50.0% | |
| ATTTGCATTAGCCCGTAGCC+GGG | + | chr6.4:48627587-48627606 | None:intergenic | 50.0% | |
| CAACTCGCTGTATCTCGGTT+GGG | - | chr6.4:48627089-48627108 | MS.gene72615:intron | 50.0% | |
| CATGCACGTCCTAGTAGAGT+TGG | - | chr6.4:48625256-48625275 | MS.gene72615:CDS | 50.0% | |
| CATTTGCATTAGCCCGTAGC+CGG | + | chr6.4:48627588-48627607 | None:intergenic | 50.0% | |
| CTATAACACGAAGGTCTCGC+CGG | + | chr6.4:48627882-48627901 | None:intergenic | 50.0% | |
| CTCATGTCCTCATGGTATGC+CGG | - | chr6.4:48628102-48628121 | MS.gene72615:CDS | 50.0% | |
| GAACTTAGAGCAACCCTTGC+TGG | + | chr6.4:48629068-48629087 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr6.4:48630257-48630276 | None:intergenic | 50.0% | |
| GCAGTTCATCCGATAGCACT+TGG | - | chr6.4:48629298-48629317 | MS.gene72615:intron | 50.0% | |
| GCCTGGTTACTTGGGAATAG+TGG | - | chr6.4:48629731-48629750 | MS.gene72615:intron | 50.0% | |
| GCTGTTCACATGTGTCTTGG+AGG | + | chr6.4:48626369-48626388 | None:intergenic | 50.0% | |
| GGAGTCATCTTAGCCCAAAC+AGG | + | chr6.4:48628211-48628230 | None:intergenic | 50.0% | |
| GGCGTTATGATGCATGGCTA+TGG | - | chr6.4:48630080-48630099 | MS.gene72615:intron | 50.0% | |
| GTACAATAAAGCCGCATGGG+AGG | - | chr6.4:48627747-48627766 | MS.gene72615:intron | 50.0% | |
| GTCAGCACAACTGTGGTTGT+TGG | + | chr6.4:48628867-48628886 | None:intergenic | 50.0% | |
| GTCTTGAACAGGATTGTCCC+TGG | - | chr6.4:48629993-48630012 | MS.gene72615:intron | 50.0% | |
| GTTAGGTACTCAACTCCAGG+TGG | - | chr6.4:48629262-48629281 | MS.gene72615:intron | 50.0% | |
| GTTCAAGACCGAAGAGCAAC+AGG | + | chr6.4:48629982-48630001 | None:intergenic | 50.0% | |
| GTTGCTCTTCGGTCTTGAAC+AGG | - | chr6.4:48629982-48630001 | MS.gene72615:intron | 50.0% | |
| TCAGACGTATCCTCCTACCA+GGG | + | chr6.4:48630013-48630032 | None:intergenic | 50.0% | |
| TCATCCGATAGCACTTGGGA+AGG | - | chr6.4:48629303-48629322 | MS.gene72615:intron | 50.0% | |
| TCATGCAGTCAGCACAACTG+TGG | + | chr6.4:48628874-48628893 | None:intergenic | 50.0% | |
| TGAACAGGATTGTCCCTGGT+AGG | - | chr6.4:48629997-48630016 | MS.gene72615:intron | 50.0% | |
| TGATTGGATCAGGTCCACCT+GGG | - | chr6.4:48625365-48625384 | MS.gene72615:intron | 50.0% | |
| ! | ACAGCGAGTTGTTTGCTGCA+GGG | + | chr6.4:48627080-48627099 | None:intergenic | 50.0% |
| ! | CTACTGACTGCGTGAATGTG+TGG | + | chr6.4:48628728-48628747 | None:intergenic | 50.0% |
| ! | GCAAGGGTTGCTCTAAGTTC+AGG | - | chr6.4:48629068-48629087 | MS.gene72615:intron | 50.0% |
| ! | GCTCTAAGTTCAGGATGCGA+GGG | - | chr6.4:48629077-48629096 | MS.gene72615:intron | 50.0% |
| ! | TACAGCGAGTTGTTTGCTGC+AGG | + | chr6.4:48627081-48627100 | None:intergenic | 50.0% |
| ! | TGCACTGGCGTTATGATGCA+TGG | - | chr6.4:48630074-48630093 | MS.gene72615:intron | 50.0% |
| ! | TGCTCTAAGTTCAGGATGCG+AGG | - | chr6.4:48629076-48629095 | MS.gene72615:intron | 50.0% |
| !! | ATTGGTGGTGTTGAGACTGG+TGG | - | chr6.4:48629388-48629407 | MS.gene72615:intron | 50.0% |
| !! | CACACACTGACTTGGTGCAA+AGG | - | chr6.4:48630374-48630393 | MS.gene72615:CDS | 50.0% |
| !! | GCAAAATGGGTGCTGCTGTT+GGG | - | chr6.4:48628128-48628147 | MS.gene72615:CDS | 50.0% |
| !! | GCTATTGGTGGTGTTGAGAC+TGG | - | chr6.4:48629385-48629404 | MS.gene72615:intron | 50.0% |
| !!! | ACCGCTATTTTTGCGATCCG+CGG | + | chr6.4:48627187-48627206 | None:intergenic | 50.0% |
| !!! | GTGGCAGGGTGGTTTTGTTT+TGG | + | chr6.4:48626462-48626481 | None:intergenic | 50.0% |
| !!! | TTGATGTTTTGGTGGCAGGG+TGG | + | chr6.4:48626473-48626492 | None:intergenic | 50.0% |
| ACAGGATTGTCCCTGGTAGG+AGG | - | chr6.4:48630000-48630019 | MS.gene72615:intron | 55.0% | |
| ACCGCCCCAACCTTCATCAA+AGG | + | chr6.4:48625416-48625435 | None:intergenic | 55.0% | |
| AGGGTCATGCGACATGCAAC+TGG | - | chr6.4:48626652-48626671 | MS.gene72615:intron | 55.0% | |
| AGGTTCAGCCCGTTGATGTC+TGG | - | chr6.4:48627984-48628003 | MS.gene72615:CDS | 55.0% | |
| ATACCCCTGCGTCAACACCA+AGG | - | chr6.4:48626252-48626271 | MS.gene72615:CDS | 55.0% | |
| ATTGCCAACCCCTCAACGCA+AGG | + | chr6.4:48629167-48629186 | None:intergenic | 55.0% | |
| CAGCCCGTTGATGTCTGGTT+CGG | - | chr6.4:48627989-48628008 | MS.gene72615:CDS | 55.0% | |
| CGCCGGATCGATGTCTAGTT+CGG | + | chr6.4:48627865-48627884 | None:intergenic | 55.0% | |
| CGGCTGCTCTTTAGACGGTT+GGG | + | chr6.4:48626282-48626301 | None:intergenic | 55.0% | |
| CTCAGACGTATCCTCCTACC+AGG | + | chr6.4:48630014-48630033 | None:intergenic | 55.0% | |
| GACGCACTAATAAGCTCGGG+TGG | - | chr6.4:48626092-48626111 | MS.gene72615:intron | 55.0% | |
| GCCTTTGATGAAGGTTGGGG+CGG | - | chr6.4:48625412-48625431 | MS.gene72615:intron | 55.0% | |
| GGAGAAAAGGGGTGGACCAA+AGG | + | chr6.4:48629648-48629667 | None:intergenic | 55.0% | |
| GGATCCCCTGATTCTTTGCC+TGG | - | chr6.4:48629714-48629733 | MS.gene72615:intron | 55.0% | |
| GGCGCTGTTCACATGTGTCT+TGG | + | chr6.4:48626372-48626391 | None:intergenic | 55.0% | |
| GGCTGCTCTTTAGACGGTTG+GGG | + | chr6.4:48626281-48626300 | None:intergenic | 55.0% | |
| GGTATGCCGGAGCGCAAAAT+GGG | - | chr6.4:48628115-48628134 | MS.gene72615:CDS | 55.0% | |
| GTGATTGGATCAGGTCCACC+TGG | - | chr6.4:48625364-48625383 | MS.gene72615:intron | 55.0% | |
| TATAGCACACTGCCGCACAG+AGG | + | chr6.4:48627221-48627240 | None:intergenic | 55.0% | |
| TCGGCTGCTCTTTAGACGGT+TGG | + | chr6.4:48626283-48626302 | None:intergenic | 55.0% | |
| TCTTCCTTCTGCTGTCTCGG+TGG | + | chr6.4:48626436-48626455 | None:intergenic | 55.0% | |
| TGCTCTTTAGACGGTTGGGG+CGG | + | chr6.4:48626278-48626297 | None:intergenic | 55.0% | |
| TGGTATGCCGGAGCGCAAAA+TGG | - | chr6.4:48628114-48628133 | MS.gene72615:CDS | 55.0% | |
| TTGTGCGGGAGGCTTCTGAT+GGG | + | chr6.4:48626321-48626340 | None:intergenic | 55.0% | |
| ! | CGGCTACGGGCTAATGCAAA+TGG | - | chr6.4:48627586-48627605 | MS.gene72615:intron | 55.0% |
| ! | TTGACGCAGGGGTATGCATG+TGG | + | chr6.4:48626247-48626266 | None:intergenic | 55.0% |
| !! | CGCAAAATGGGTGCTGCTGT+TGG | - | chr6.4:48628127-48628146 | MS.gene72615:CDS | 55.0% |
| !! | GCTGCAGGGCTGGTTGATTA+AGG | + | chr6.4:48627066-48627085 | None:intergenic | 55.0% |
| AACCCCTCAACGCAAGGCTC+AGG | + | chr6.4:48629161-48629180 | None:intergenic | 60.0% | |
| ACGTCCTGAGCCTTGCGTTG+AGG | - | chr6.4:48629154-48629173 | MS.gene72615:intron | 60.0% | |
| CAAAGGGTTTGGCTGCTGGC+AGG | + | chr6.4:48626393-48626412 | None:intergenic | 60.0% | |
| CGTCCTGAGCCTTGCGTTGA+GGG | - | chr6.4:48629155-48629174 | MS.gene72615:intron | 60.0% | |
| CTCCTCGTTATGCCCGGCTA+CGG | - | chr6.4:48627572-48627591 | MS.gene72615:CDS | 60.0% | |
| CTGTCTCGGTGGTGACAGGT+CGG | + | chr6.4:48626425-48626444 | None:intergenic | 60.0% | |
| GTCACCACCGAGACAGCAGA+AGG | - | chr6.4:48626429-48626448 | MS.gene72615:intron | 60.0% | |
| GTCCTGAGCCTTGCGTTGAG+GGG | - | chr6.4:48629156-48629175 | MS.gene72615:intron | 60.0% | |
| GTTGTGCGGGAGGCTTCTGA+TGG | + | chr6.4:48626322-48626341 | None:intergenic | 60.0% | |
| TCCTCGTTATGCCCGGCTAC+GGG | - | chr6.4:48627573-48627592 | MS.gene72615:CDS | 60.0% | |
| TCTGCTGTCTCGGTGGTGAC+AGG | + | chr6.4:48626429-48626448 | None:intergenic | 60.0% | |
| TGAGCCTTGCGTTGAGGGGT+TGG | - | chr6.4:48629160-48629179 | MS.gene72615:intron | 60.0% | |
| TGCGTCTTGCACGGGCTTGT+TGG | + | chr6.4:48626078-48626097 | None:intergenic | 60.0% | |
| TTGCGCTCCGGCATACCATG+AGG | + | chr6.4:48628112-48628131 | None:intergenic | 60.0% | |
| ! | CGAGTTGTTTGCTGCAGGGC+TGG | + | chr6.4:48627076-48627095 | None:intergenic | 60.0% |
| ! | GCAGCACCCATTTTGCGCTC+CGG | + | chr6.4:48628124-48628143 | None:intergenic | 60.0% |
| !! | GGAGGCTTCTGATGGGCTCT+TGG | + | chr6.4:48626314-48626333 | None:intergenic | 60.0% |
| TTAGACGGTTGGGGCGGCCT+TGG | + | chr6.4:48626272-48626291 | None:intergenic | 65.0% | |
| !! | CGGCCTTGGTGTTGACGCAG+GGG | + | chr6.4:48626258-48626277 | None:intergenic | 65.0% |
| !! | GCGGCCTTGGTGTTGACGCA+GGG | + | chr6.4:48626259-48626278 | None:intergenic | 65.0% |
| GCCCGTAGCCGGGCATAACG+AGG | + | chr6.4:48627577-48627596 | None:intergenic | 70.0% | |
| !! | GGCGGCCTTGGTGTTGACGC+AGG | + | chr6.4:48626260-48626279 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 48625178 | 48630507 | 48625178 | ID=MS.gene72615 |
| chr6.4 | mRNA | 48625178 | 48630507 | 48625178 | ID=MS.gene72615.t1;Parent=MS.gene72615 |
| chr6.4 | exon | 48630235 | 48630507 | 48630235 | ID=MS.gene72615.t1.exon1;Parent=MS.gene72615.t1 |
| chr6.4 | CDS | 48630235 | 48630507 | 48630235 | ID=cds.MS.gene72615.t1;Parent=MS.gene72615.t1 |
| chr6.4 | exon | 48627884 | 48628147 | 48627884 | ID=MS.gene72615.t1.exon2;Parent=MS.gene72615.t1 |
| chr6.4 | CDS | 48627884 | 48628147 | 48627884 | ID=cds.MS.gene72615.t1;Parent=MS.gene72615.t1 |
| chr6.4 | exon | 48627433 | 48627603 | 48627433 | ID=MS.gene72615.t1.exon3;Parent=MS.gene72615.t1 |
| chr6.4 | CDS | 48627433 | 48627603 | 48627433 | ID=cds.MS.gene72615.t1;Parent=MS.gene72615.t1 |
| chr6.4 | exon | 48626508 | 48626620 | 48626508 | ID=MS.gene72615.t1.exon4;Parent=MS.gene72615.t1 |
| chr6.4 | CDS | 48626508 | 48626620 | 48626508 | ID=cds.MS.gene72615.t1;Parent=MS.gene72615.t1 |
| chr6.4 | exon | 48626232 | 48626418 | 48626232 | ID=MS.gene72615.t1.exon5;Parent=MS.gene72615.t1 |
| chr6.4 | CDS | 48626232 | 48626418 | 48626232 | ID=cds.MS.gene72615.t1;Parent=MS.gene72615.t1 |
| chr6.4 | exon | 48625505 | 48625614 | 48625505 | ID=MS.gene72615.t1.exon6;Parent=MS.gene72615.t1 |
| chr6.4 | CDS | 48625505 | 48625614 | 48625505 | ID=cds.MS.gene72615.t1;Parent=MS.gene72615.t1 |
| chr6.4 | exon | 48625178 | 48625334 | 48625178 | ID=MS.gene72615.t1.exon7;Parent=MS.gene72615.t1 |
| chr6.4 | CDS | 48625178 | 48625334 | 48625178 | ID=cds.MS.gene72615.t1;Parent=MS.gene72615.t1 |
| Gene Sequence |
| Protein sequence |
