AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051960.t1 MTR_2g099690 98.938 1224 13 0 1 1224 1 1224 0.0 2528
MS.gene051960.t1 MTR_2g099690 98.785 905 11 0 1 905 1 905 0.0 1854
MS.gene051960.t1 MTR_2g099690 98.276 870 15 0 1 870 1 870 0.0 1777
MS.gene051960.t1 MTR_8g018290 83.219 876 145 2 349 1223 3 877 0.0 1544
MS.gene051960.t1 MTR_8g018290 82.559 883 145 3 349 1223 3 884 0.0 1537
MS.gene051960.t1 MTR_4g112430 56.436 1212 484 8 8 1205 6 1187 0.0 1391
MS.gene051960.t1 MTR_8g069920 55.330 1229 500 11 10 1215 8 1210 0.0 1387
MS.gene051960.t1 MTR_6g006910 55.317 1213 486 8 8 1190 6 1192 0.0 1359
MS.gene051960.t1 MTR_0021s0360 54.598 1218 502 11 7 1208 1 1183 0.0 1338
MS.gene051960.t1 MTR_3g037330 55.236 1184 478 11 10 1177 5 1152 0.0 1330
MS.gene051960.t1 MTR_3g037330 55.516 1115 438 9 85 1177 4 1082 0.0 1264
MS.gene051960.t1 MTR_5g037210 44.291 1156 583 14 35 1174 19 1129 0.0 968
MS.gene051960.t1 MTR_8g044210 36.395 1154 647 25 40 1172 69 1156 0.0 668
MS.gene051960.t1 MTR_7g073480 35.684 1191 644 25 40 1173 142 1267 0.0 666
MS.gene051960.t1 MTR_3g007240 34.918 1157 657 20 40 1177 120 1199 0.0 664
MS.gene051960.t1 MTR_3g007240 36.133 869 461 16 40 886 120 916 2.53e-156 492
MS.gene051960.t1 MTR_8g062150 44.652 589 277 10 35 617 39 584 8.69e-154 474
MS.gene051960.t1 MTR_2g090610 32.932 747 441 22 438 1167 321 1024 9.10e-106 360
MS.gene051960.t1 MTR_2g090610 37.170 417 238 9 41 448 3 404 4.51e-66 244
MS.gene051960.t1 MTR_2g090610 33.489 642 369 19 451 1072 330 933 1.97e-95 328
MS.gene051960.t1 MTR_2g090610 37.170 417 238 9 41 448 3 404 5.15e-67 245
MS.gene051960.t1 MTR_2g056040 60.938 64 25 0 710 773 1 64 3.77e-21 89.4
MS.gene051960.t1 MTR_8g027160 25.328 458 249 16 568 997 451 843 2.62e-18 91.7
MS.gene051960.t1 MTR_8g027160 26.005 423 223 15 568 962 451 811 3.64e-18 91.3
MS.gene051960.t1 MTR_8g027160 26.374 364 181 13 568 904 451 754 1.99e-15 82.0
MS.gene051960.t1 MTR_8g027160 26.374 364 181 13 568 904 451 754 2.46e-15 81.6
MS.gene051960.t1 MTR_4g043690 21.790 514 293 16 608 1106 549 968 1.08e-12 73.2
MS.gene051960.t1 MTR_8g090125 27.311 238 123 5 545 772 455 652 2.25e-12 72.4
MS.gene051960.t1 MTR_0005s0140 21.790 514 293 16 608 1106 464 883 2.86e-12 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051960.t1 AT1G17500 75.472 1219 280 6 6 1222 5 1206 0.0 1918
MS.gene051960.t1 AT1G17500 75.472 1219 280 6 6 1222 5 1206 0.0 1918
MS.gene051960.t1 AT1G54280 74.156 1215 308 4 14 1222 13 1227 0.0 1897
MS.gene051960.t1 AT1G54280 74.156 1215 308 4 14 1222 13 1227 0.0 1897
MS.gene051960.t1 AT1G54280 74.156 1215 308 4 14 1222 13 1227 0.0 1897
MS.gene051960.t1 AT1G72700 74.569 1219 303 5 6 1222 5 1218 0.0 1895
MS.gene051960.t1 AT1G72700 74.569 1219 303 5 6 1222 5 1218 0.0 1895
MS.gene051960.t1 AT1G72700 74.569 1219 303 5 6 1222 5 1218 0.0 1895
MS.gene051960.t1 AT3G13900 74.220 1218 300 6 14 1222 13 1225 0.0 1880
MS.gene051960.t1 AT3G13900 75.133 937 219 6 14 941 13 944 0.0 1442
MS.gene051960.t1 AT3G25610 56.612 1210 478 9 11 1206 11 1187 0.0 1409
MS.gene051960.t1 AT1G13210 56.219 1222 485 12 1 1206 1 1188 0.0 1390
MS.gene051960.t1 AT1G68710 56.328 1209 490 8 11 1208 13 1194 0.0 1390
MS.gene051960.t1 AT1G68710 56.328 1209 490 8 11 1208 13 1194 0.0 1390
MS.gene051960.t1 AT1G68710 55.223 1235 489 9 11 1208 13 1220 0.0 1378
MS.gene051960.t1 AT3G27870 54.805 1228 490 10 8 1216 6 1187 0.0 1377
MS.gene051960.t1 AT3G13900 74.144 905 220 6 14 909 13 912 0.0 1369
MS.gene051960.t1 AT1G26130 55.135 1188 481 7 5 1178 7 1156 0.0 1351
MS.gene051960.t1 AT1G26130 55.004 1189 482 8 5 1178 7 1157 0.0 1349
MS.gene051960.t1 AT1G26130 55.004 1189 482 8 5 1178 7 1157 0.0 1349
MS.gene051960.t1 AT1G26130 55.004 1189 482 8 5 1178 7 1157 0.0 1349
MS.gene051960.t1 AT3G27870 57.017 1019 386 8 8 1008 6 990 0.0 1181
MS.gene051960.t1 AT3G27870 55.096 1040 405 8 195 1216 1 996 0.0 1180
MS.gene051960.t1 AT1G59820 44.928 1173 584 15 35 1193 31 1155 0.0 1004
MS.gene051960.t1 AT5G04930 35.882 1151 630 23 40 1167 67 1132 0.0 677
MS.gene051960.t1 AT5G44240 32.882 739 430 26 451 1167 330 1024 1.61e-105 359
MS.gene051960.t1 AT5G44240 36.473 414 245 6 41 448 3 404 2.80e-63 236
MS.gene051960.t1 AT5G44240 32.882 739 430 26 451 1167 362 1056 2.41e-105 360
MS.gene051960.t1 AT5G44240 36.364 418 248 6 37 448 31 436 7.78e-64 238
MS.gene051960.t1 AT3G57330 21.913 575 329 24 607 1163 539 1011 1.69e-13 75.9
MS.gene051960.t1 AT3G57330 24.181 397 204 13 607 990 484 796 2.20e-13 75.5

Find 304 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACTGCTCTTATTCTTTA+TGG -0.004187 2.2:+3346511 MS.gene051960:CDS
ATCAAAACCAAATCCCTTTA+TGG 0.183658 2.2:-3346965 None:intergenic
CTTGTAGCTGCTAGAGAATT+TGG 0.196719 2.2:+3347150 MS.gene051960:CDS
TCTTGTAGTACTTGATTTCT+TGG 0.198980 2.2:-3351455 None:intergenic
CTTTGACTGGTATAGAATAT+TGG 0.203414 2.2:+3351011 MS.gene051960:CDS
GCCATCTGAAGTTTGCTTAC+AGG 0.205304 2.2:+3350866 MS.gene051960:CDS
TCTAGGCATTTGAATGAATA+TGG 0.222551 2.2:+3347860 MS.gene051960:CDS
CTCAAGCTGGTCTCAAGATC+TGG 0.246247 2.2:+3348192 MS.gene051960:CDS
ACTGAGCATGATTGCTCCTT+TGG 0.248742 2.2:+3345748 MS.gene051960:CDS
CTTTATGGAAACTAGCTTTC+CGG 0.248782 2.2:-3345850 None:intergenic
TTGCTCCCGCTCCTATTTAT+TGG 0.255761 2.2:+3351337 MS.gene051960:CDS
AAACATAATAGCATTGTATT+TGG 0.263696 2.2:-3345627 None:intergenic
GCATGTAACAGTTACTAAAA+TGG 0.265482 2.2:-3351367 None:intergenic
CAAGCACTTCAACCAATATT+TGG 0.271782 2.2:-3351317 None:intergenic
CCAGCAAATCCAAGTTTCTT+AGG 0.274337 2.2:-3346475 None:intergenic
TAAGAATGGAAAGAAGTATT+TGG 0.285459 2.2:+3347829 MS.gene051960:CDS
AAGTGTAAAGATTGGGATTT+GGG 0.289230 2.2:-3346126 None:intergenic
CCTAAGAAACTTGGATTTGC+TGG 0.290890 2.2:+3346475 MS.gene051960:CDS
TACCTGTTTCTCTTATTATA+TGG 0.291898 2.2:+3351261 MS.gene051960:CDS
TGAGACAGTTGTTACTTCTA+AGG 0.292034 2.2:+3346921 MS.gene051960:CDS
TTTGACTGGTATAGAATATT+GGG 0.293664 2.2:+3351012 MS.gene051960:CDS
TGCTAATATATACTTCCTTT+TGG 0.296160 2.2:+3345685 MS.gene051960:CDS
CCCCAAAGTGGTGGTATTTA+CGG 0.309035 2.2:+3346425 MS.gene051960:CDS
CAATGTTCACCTGCATCATC+TGG 0.314705 2.2:+3351154 MS.gene051960:CDS
CATGACTGCGTACCAAATAT+TGG 0.316415 2.2:+3351305 MS.gene051960:CDS
CGCGAAAGAATTTCTGCTTC+TGG 0.317534 2.2:+3347213 MS.gene051960:CDS
CGCGTACGACAACACTTGAT+TGG 0.318726 2.2:-3347194 None:intergenic
GAGGCCTTTGCGGGCTTCTC+TGG 0.326225 2.2:+3350750 MS.gene051960:CDS
GTCAATCGGTTTATAATGAT+TGG 0.339629 2.2:+3350772 MS.gene051960:CDS
TGAGGTTGTGAAGGTATTAC+AGG 0.340949 2.2:+3346567 MS.gene051960:CDS
AAAGTGTAAAGATTGGGATT+TGG 0.341160 2.2:-3346127 None:intergenic
GCCGTAAATACCACCACTTT+GGG 0.344504 2.2:-3346426 None:intergenic
TAATAAATGATATCGCTATA+AGG 0.346147 2.2:-3346366 None:intergenic
TGCCTCACAATTGATGAATC+TGG 0.348326 2.2:+3348591 MS.gene051960:CDS
AGGCCTGCCATAAAGGGATT+TGG 0.348487 2.2:+3346958 MS.gene051960:CDS
TGCCACGGGTGAGGAGGATT+AGG 0.351298 2.2:+3345432 MS.gene051960:CDS
AGGAACACAGAGTATGTCTA+TGG 0.354605 2.2:+3346226 MS.gene051960:CDS
TCAAGCATTGCCTCTCTATC+AGG 0.358591 2.2:-3347986 None:intergenic
ATGGTTGCTGTCCAATAAAT+AGG 0.361944 2.2:-3351348 None:intergenic
GCCGGCTCATGAATGGTAAT+TGG 0.362433 2.2:+3346992 MS.gene051960:CDS
GGTCTCTCCATCTAAATTCA+TGG 0.366806 2.2:-3346011 None:intergenic
TGAGAAGGTATCAGATAGTA+TGG 0.366820 2.2:+3348006 MS.gene051960:CDS
TGGAGCAATCTTTACACGTT+TGG 0.375414 2.2:+3345467 MS.gene051960:CDS
AGTATTTGGAGACTACTTCT+AGG 0.377268 2.2:+3347843 MS.gene051960:CDS
TGCGGGCTTCTCTGGTCAAT+CGG 0.378820 2.2:+3350758 MS.gene051960:CDS
GAAAGAGAGTTGATTCTTGT+TGG 0.378967 2.2:+3348028 MS.gene051960:CDS
CTCTCTCTATGTTTCAATTG+AGG 0.381245 2.2:+3346549 MS.gene051960:CDS
CCATGGGATTAAAACACCTT+TGG 0.388464 2.2:-3351419 None:intergenic
AAAGAGAGTTGATTCTTGTT+GGG 0.393775 2.2:+3348029 MS.gene051960:CDS
TGCATGTAGTTTACTTCGAC+AGG 0.396919 2.2:+3348385 MS.gene051960:CDS
CTCAAGATCTGGGTCTTGAC+AGG 0.397649 2.2:+3348203 MS.gene051960:CDS
CAGTATGATCCTAAGAAACT+TGG 0.400443 2.2:+3346466 MS.gene051960:CDS
TGCCATATAATAAGAGAAAC+AGG 0.402768 2.2:-3351263 None:intergenic
AACACCTTTGGAACGATATG+TGG 0.408763 2.2:-3351407 None:intergenic
GGCACCTCATCGGCAGTATT+CGG 0.408943 2.2:-3345500 None:intergenic
GGATCAAAGGCCTGCCATAA+AGG 0.411132 2.2:+3346951 MS.gene051960:CDS
GGTGTTGTATCCATGTAAAA+TGG 0.413146 2.2:-3351209 None:intergenic
ATACACGGTTCTCGAGTAAC+CGG 0.413320 2.2:-3345540 None:intergenic
ACCATCCTCTCCGATAAAAC+TGG 0.415442 2.2:+3346691 MS.gene051960:CDS
AGTGGACTGAAAGGTGAAAT+TGG 0.420291 2.2:-3345728 None:intergenic
CCCAACAAAAGTGTAAAGAT+TGG 0.421152 2.2:-3346134 None:intergenic
CGTGGCAGAAAATTATGGTT+GGG 0.423006 2.2:+3345897 MS.gene051960:CDS
GGCTCATTGTCAAGGCAATC+TGG 0.425567 2.2:-3351188 None:intergenic
GTGGAAACCATGAATTTAGA+TGG 0.427169 2.2:+3346004 MS.gene051960:CDS
CTTGAAGGTGAAAAGATCAT+TGG 0.428135 2.2:+3346036 MS.gene051960:CDS
GTCAAATTTGAATGAAGAGT+TGG 0.430916 2.2:+3346657 MS.gene051960:CDS
TTTACACGTTTGGTTGTCTT+CGG 0.431725 2.2:+3345477 MS.gene051960:CDS
CGGAAAGCTAGTTTCCATAA+AGG 0.435290 2.2:+3345851 MS.gene051960:CDS
TAAAAGCTCCATCATTATCA+AGG 0.438639 2.2:-3346072 None:intergenic
CCAACAAAAGTGTAAAGATT+GGG 0.441447 2.2:-3346133 None:intergenic
GCGTACGACAACACTTGATT+GGG 0.441871 2.2:-3347193 None:intergenic
TGTTCCTGAGCTTTGAATCT+CGG 0.442100 2.2:-3346210 None:intergenic
CATCATACATGTGAAGGTCT+TGG 0.443115 2.2:-3346603 None:intergenic
GATCAAAGGCCTGCCATAAA+GGG 0.443990 2.2:+3346952 MS.gene051960:CDS
GGGAAGACCACTTTAGCAAT+AGG 0.443998 2.2:+3349475 MS.gene051960:CDS
CAGCAGCCATGTCTGCAGTC+TGG 0.445464 2.2:-3351122 None:intergenic
AGGTTAGTGAAAGAAGGAAC+TGG 0.445948 2.2:+3349454 MS.gene051960:CDS
GATCATACTGATATTCAATC+TGG 0.446440 2.2:-3346453 None:intergenic
CAAGTCGTGGCAGAAAATTA+TGG 0.447244 2.2:+3345892 MS.gene051960:CDS
AACAAAATGACTTCAGCATT+GGG 0.450150 2.2:-3347024 None:intergenic
TCAGAATCAGTGATCAATGA+TGG 0.455498 2.2:+3348440 MS.gene051960:CDS
CATCAAGCTTTCTGTAAGCC+AGG 0.456979 2.2:-3347907 None:intergenic
TAGGTTCCTTCAAGATGTTA+AGG 0.457323 2.2:+3345820 MS.gene051960:CDS
TCAAATTTGAATGAAGAGTT+GGG 0.458750 2.2:+3346658 MS.gene051960:CDS
CAAGAGTGGAAGCAACGATC+AGG 0.458862 2.2:+3351553 MS.gene051960:CDS
GCCACGGGTGAGGAGGATTA+GGG 0.459309 2.2:+3345433 MS.gene051960:CDS
GTATAGAATATTGGGATGGA+TGG 0.460979 2.2:+3351020 MS.gene051960:CDS
GTATAAAATACTGAATCTGC+TGG 0.461340 2.2:+3347405 MS.gene051960:CDS
CAGAAAGCTAAGACAGCTGT+TGG 0.462153 2.2:+3347962 MS.gene051960:CDS
AACTGTTCAAACAGCGCCTT+AGG 0.462457 2.2:-3345653 None:intergenic
CAACAAAATGACTTCAGCAT+TGG 0.465280 2.2:-3347025 None:intergenic
GCAAGACAGGAAACAAAGAT+TGG 0.466027 2.2:+3351522 MS.gene051960:CDS
TAAGCTCGGGAATGGCAGTA+TGG 0.467232 2.2:-3347071 None:intergenic
GGCCGTAAATACCACCACTT+TGG 0.467312 2.2:-3346427 None:intergenic
TTGAATGAATATGGAGAGGT+GGG 0.467506 2.2:+3347869 MS.gene051960:CDS
TTACAAGAGAATTGCACAAA+TGG 0.468118 2.2:+3350513 MS.gene051960:CDS
TGGAAGACAAGCTGCAGAAA+GGG 0.468231 2.2:+3348062 MS.gene051960:CDS
CGCTGTTTGAACAGTTTCGA+AGG 0.468874 2.2:+3345660 MS.gene051960:CDS
TCCATTGCTGGAATTTCCTA+TGG 0.469073 2.2:+3346751 MS.gene051960:CDS
ACAAGAAAAGCCCCTTCATC+AGG 0.469630 2.2:-3347132 None:intergenic
ACCAATTACCATTCATGAGC+CGG 0.470095 2.2:-3346993 None:intergenic
TTGTGAAGGTATTACAGGCC+AGG 0.483058 2.2:+3346572 MS.gene051960:CDS
CAAGAAGCTGACATTGGTGT+TGG 0.483165 2.2:+3349526 MS.gene051960:CDS
GGATATAGTGAAAGTAGAAA+AGG 0.483379 2.2:+3345919 MS.gene051960:CDS
TCCATCATTATCAAGGGAAA+AGG 0.483733 2.2:-3346065 None:intergenic
TAATTTCCCCATGCAAAAGA+AGG 0.484623 2.2:+3346852 MS.gene051960:CDS
TTTGAATGAAGAGTTGGGTC+AGG 0.487726 2.2:+3346663 MS.gene051960:CDS
TTTGACGTCCGTGCTTCAGC+AGG 0.487803 2.2:-3346640 None:intergenic
TAAGAGAAACAGGTACCAAC+TGG 0.488361 2.2:-3351253 None:intergenic
GATGACAGCCGGCTCATGAA+TGG 0.491054 2.2:+3346985 MS.gene051960:CDS
CAGGTTTATCCTCTTGATCC+TGG 0.491102 2.2:+3346175 MS.gene051960:CDS
GATTAACCTTAACATCTTGA+AGG 0.491796 2.2:-3345826 None:intergenic
TGCAGCAAGTTCAACTTCAC+TGG 0.492145 2.2:-3346782 None:intergenic
TACTGATATTCAATCTGGTC+GGG 0.492366 2.2:-3346448 None:intergenic
ATTCATCAATTGTGAGGCAT+TGG 0.492718 2.2:-3348587 None:intergenic
CACATGTATGATGAAGAAAC+CGG 0.494332 2.2:+3346613 MS.gene051960:CDS
CAATATTTGGTACGCAGTCA+TGG 0.495007 2.2:-3351304 None:intergenic
TATAGAATATTGGGATGGAT+GGG 0.495640 2.2:+3351021 MS.gene051960:CDS
ACCATCACCTATTGCTAAAG+TGG 0.496848 2.2:-3349482 None:intergenic
GAGGTGCCTCATCCACTTCA+AGG 0.497127 2.2:+3345515 MS.gene051960:CDS
TGGAAACTGCAATCAACATT+GGG 0.497583 2.2:+3348234 MS.gene051960:CDS
GTTGGAATCAGCGGGGTTGA+AGG 0.500123 2.2:+3349544 MS.gene051960:CDS
GAACTTTGAGTACGAACGTC+AGG 0.500582 2.2:+3346156 MS.gene051960:CDS
ACGAGAGGCAAGCAGCCAAA+AGG 0.502517 2.2:-3345700 None:intergenic
CTGCAGAAGAAGCAAACATC+AGG 0.503128 2.2:+3351591 MS.gene051960:CDS
TATGGCAAACGGCTAGTATC+CGG 0.503434 2.2:-3347053 None:intergenic
GACAATAGAAGCAAGTCAGC+TGG 0.505613 2.2:-3345953 None:intergenic
GACCAAGCATTTCGTCTGAA+TGG 0.505754 2.2:+3351099 MS.gene051960:CDS
CCGTGTATCTCCCAAGCAAA+AGG 0.506483 2.2:+3348738 MS.gene051960:CDS
CTAAGAAACTTGGATTTGCT+GGG 0.506852 2.2:+3346476 MS.gene051960:CDS
ACATTGGTGTTGGAATCAGC+GGG 0.507387 2.2:+3349536 MS.gene051960:CDS
ATGGAAACTGCAATCAACAT+TGG 0.509063 2.2:+3348233 MS.gene051960:CDS
ATATTGGGATGGATGGGGAA+TGG 0.509388 2.2:+3351027 MS.gene051960:CDS
TTTGATAGACTATCTAAGAA+TGG 0.509862 2.2:+3347815 MS.gene051960:CDS
AACGATATGTGGGCAAGATA+AGG 0.509978 2.2:-3351396 None:intergenic
TCAAGCTGGTCTCAAGATCT+GGG 0.510110 2.2:+3348193 MS.gene051960:CDS
GGTCTTGACAGGGGATAAGA+TGG 0.511012 2.2:+3348214 MS.gene051960:CDS
CTAAGGATGGTGAGGATCAA+AGG 0.512008 2.2:+3346938 MS.gene051960:CDS
ATGAACAAGAGTACTCTGAT+TGG 0.513220 2.2:+3347927 MS.gene051960:CDS
CCGTGCTTCAGCAGGAGTCC+CGG 0.513618 2.2:-3346632 None:intergenic
ATATCATTTATTAGTTCAGT+AGG 0.514244 2.2:+3346376 MS.gene051960:CDS
GAGCGGCTTCTGGTAGTCCA+TGG 0.515390 2.2:+3350481 MS.gene051960:CDS
TTGGATAATGTGATGATCCA+TGG 0.517598 2.2:-3351436 None:intergenic
AAGCTGAATCACCTGATGAA+GGG 0.520268 2.2:+3347121 MS.gene051960:CDS
TCTGCATGACTTTGCTGTCG+TGG 0.520589 2.2:-3346267 None:intergenic
TCTTGTTGGGGCTACTGCTG+TGG 0.521822 2.2:+3348042 MS.gene051960:CDS
TCGTTGCCTGTCATTTCACT+TGG 0.521994 2.2:+3350825 MS.gene051960:CDS
TAGTATGGCAAAGGAAGCAC+TGG 0.526226 2.2:+3345787 MS.gene051960:CDS
TCTTGTAACACCAGTGTCCA+TGG 0.530877 2.2:-3350498 None:intergenic
GAGGTAAGATGCCACGGGTG+AGG 0.531710 2.2:+3345423 None:intergenic
TCCTCCGAGATTCAAAGCTC+AGG 0.532806 2.2:+3346206 MS.gene051960:CDS
CCCTTGGAGGTAAGATGCCA+CGG 0.532969 2.2:+3345417 None:intergenic
GTGGAAGACAAGCTGCAGAA+AGG 0.533612 2.2:+3348061 MS.gene051960:CDS
AGAAAGCTAAGACAGCTGTT+GGG 0.534274 2.2:+3347963 MS.gene051960:CDS
AACTTTAACCTGCAATCAGA+TGG 0.535595 2.2:+3346714 MS.gene051960:CDS
TGTAAAATGGCTCATTGTCA+AGG 0.536315 2.2:-3351196 None:intergenic
ATAGAATATTGGGATGGATG+GGG 0.536740 2.2:+3351022 MS.gene051960:CDS
ATTGATAAACTTGCTCAAGC+TGG 0.537669 2.2:+3348179 MS.gene051960:CDS
GGAGCGGTCTAAAGCAAGAC+AGG 0.538250 2.2:+3351509 MS.gene051960:CDS
GAATAAGAGCAGTGATCAGA+TGG 0.542203 2.2:-3346504 None:intergenic
GAAGGTGAAAAGATCATTGG+AGG 0.542802 2.2:+3346039 MS.gene051960:CDS
AAGAGAGTTGATTCTTGTTG+GGG 0.542957 2.2:+3348030 MS.gene051960:CDS
TGTCTTCAAGTTACGAGGAT+GGG 0.542987 2.2:+3345972 MS.gene051960:CDS
GAAGCTGAATCACCTGATGA+AGG 0.543503 2.2:+3347120 MS.gene051960:CDS
CAGCGGGGTTGAAGGTATGC+AGG 0.543612 2.2:+3349552 MS.gene051960:CDS
AAACCAAATCCCTTTATGGC+AGG 0.543947 2.2:-3346961 None:intergenic
AGATGGAGAGACCAACTTGA+AGG 0.544036 2.2:+3346021 MS.gene051960:CDS
CAACGATCAGGCAGCTGAAG+GGG 0.544149 2.2:+3351565 MS.gene051960:CDS
AAGGAAGAAGATGGCGAGGG+AGG 0.544489 2.2:-3351058 None:intergenic
CCTCATCCACTTCAAGGTCC+CGG 0.546459 2.2:+3345521 MS.gene051960:CDS
GTCAATAATTAACGCAAAAG+CGG 0.546996 2.2:-3348629 None:intergenic
AAGATCAACACATGTGGACG+AGG 0.547818 2.2:+3351487 MS.gene051960:CDS
ACGTGTAAAGATTGCTCCAC+CGG 0.548589 2.2:-3345463 None:intergenic
GTAACAAGGTTAGTGAAAGA+AGG 0.549223 2.2:+3349448 MS.gene051960:CDS
ATTGAAACATAGAGAGAGAT+GGG 0.549797 2.2:-3346544 None:intergenic
AATTTCTGCTTCTGGACAAG+TGG 0.549984 2.2:+3347221 MS.gene051960:CDS
ATCTCCCAAGCAAAAGGCCC+TGG 0.550219 2.2:+3348744 MS.gene051960:CDS
TTGCTCTCCTCATTAAGCTC+GGG 0.550483 2.2:-3347084 None:intergenic
AACACATGTGGACGAGGGAG+CGG 0.550746 2.2:+3351493 MS.gene051960:CDS
GGTCCTTGCTGATATAGTGC+AGG 0.551150 2.2:-3350976 None:intergenic
GTTGCTCTCCTCATTAAGCT+CGG 0.551554 2.2:-3347085 None:intergenic
AGTGATCAATGATGGGAAAG+AGG 0.551790 2.2:+3348448 MS.gene051960:CDS
GGATACAACACCTCTTTGTG+TGG 0.551898 2.2:+3351220 MS.gene051960:CDS
GTTGACAGCCCAGATGATGC+AGG 0.554129 2.2:-3351163 None:intergenic
TTGTCTTCAAGTTACGAGGA+TGG 0.555378 2.2:+3345971 MS.gene051960:CDS
TGTTTCAATTGAGGTTGTGA+AGG 0.555468 2.2:+3346558 MS.gene051960:CDS
AATGTTCACCTGCATCATCT+GGG 0.556690 2.2:+3351155 MS.gene051960:CDS
TCAAGATCTGGGTCTTGACA+GGG 0.557929 2.2:+3348204 MS.gene051960:CDS
TTTCTTCATCATACATGTGA+AGG 0.558556 2.2:-3346609 None:intergenic
CTTCTGGACAAGTGGTTGAA+AGG 0.560529 2.2:+3347229 MS.gene051960:CDS
CAGAATCAGTGATCAATGAT+GGG 0.561678 2.2:+3348441 MS.gene051960:CDS
GGCCATTCAGACGAAATGCT+TGG 0.562417 2.2:-3351101 None:intergenic
TTGAGGCTGGTTGCAATACA+CGG 0.563180 2.2:-3345555 None:intergenic
AATTGAAACATAGAGAGAGA+TGG 0.563890 2.2:-3346545 None:intergenic
TGCCATTCCCGAGCTTAATG+AGG 0.567067 2.2:+3347077 MS.gene051960:CDS
CTCCTCATTAAGCTCGGGAA+TGG 0.567643 2.2:-3347079 None:intergenic
TTCTGGTAGTCCATGGACAC+TGG 0.568443 2.2:+3350488 MS.gene051960:CDS
ACCTGTAAGCAAACTTCAGA+TGG 0.569161 2.2:-3350867 None:intergenic
GGAACACAGAGTATGTCTAT+GGG 0.569318 2.2:+3346227 MS.gene051960:CDS
GATGATGACAAGGAAGAAGA+TGG 0.569608 2.2:-3351067 None:intergenic
GCAACGATCAGGCAGCTGAA+GGG 0.569802 2.2:+3351564 MS.gene051960:CDS
GAATGGCCAGACTGCAGACA+TGG 0.570084 2.2:+3351116 MS.gene051960:CDS
TCAGACGAAATGCTTGGTCA+TGG 0.570355 2.2:-3351095 None:intergenic
AAAGAAGGGTAAAGCGCCAT+GGG 0.570699 2.2:+3346867 MS.gene051960:CDS
AGCTGAATCACCTGATGAAG+GGG 0.571217 2.2:+3347122 MS.gene051960:CDS
GCAGATGGCTACTGATCTTG+AGG 0.571660 2.2:+3346810 MS.gene051960:CDS
GCTGTCCAATAAATAGGAGC+GGG 0.571707 2.2:-3351342 None:intergenic
AAGGTCTTGGTTAATGAACC+TGG 0.572297 2.2:-3346590 None:intergenic
TTTGAATGAATATGGAGAGG+TGG 0.572838 2.2:+3347868 MS.gene051960:CDS
ACCATAGGAAATTCCAGCAA+TGG 0.574285 2.2:-3346752 None:intergenic
CCGGGACCTTGAAGTGGATG+AGG 0.574566 2.2:-3345521 None:intergenic
GATACAACACCTCTTTGTGT+GGG 0.575041 2.2:+3351221 MS.gene051960:CDS
GTGGCAGAAAATTATGGTTG+GGG 0.576119 2.2:+3345898 MS.gene051960:CDS
ACAGTTGTTACTTCTAAGGA+TGG 0.577696 2.2:+3346925 MS.gene051960:CDS
TGGATAATGTGATGATCCAT+GGG 0.578117 2.2:-3351435 None:intergenic
GGGTTTGAGAACATTAGCCC+TGG 0.578638 2.2:+3347889 MS.gene051960:CDS
GCAAGTTTATCAATGCATTG+AGG 0.579292 2.2:-3348170 None:intergenic
AAAAGAAGGGTAAAGCGCCA+TGG 0.579312 2.2:+3346866 MS.gene051960:CDS
CAGAAGAAGCAAACATCAGG+AGG 0.579645 2.2:+3351594 MS.gene051960:CDS
AGCTGTTGGGCCTGATAGAG+AGG 0.581244 2.2:+3347976 MS.gene051960:CDS
ATACTGATATTCAATCTGGT+CGG 0.581258 2.2:-3346449 None:intergenic
AGCAACGATCAGGCAGCTGA+AGG 0.581592 2.2:+3351563 MS.gene051960:CDS
ATCAAGCTTTCTGTAAGCCA+GGG 0.582698 2.2:-3347906 None:intergenic
ATCATGCTCAGTGGACTGAA+AGG 0.583141 2.2:-3345737 None:intergenic
TGTGGGGCAGCATAGCCAGT+TGG 0.583668 2.2:+3351238 MS.gene051960:CDS
GAGTAACCGGGACCTTGAAG+TGG 0.586282 2.2:-3345527 None:intergenic
GTAAGATGCCACGGGTGAGG+AGG 0.587556 2.2:+3345426 None:intergenic
TCGTGGCAGAAAATTATGGT+TGG 0.587670 2.2:+3345896 MS.gene051960:CDS
CCGGGACTCCTGCTGAAGCA+CGG 0.589978 2.2:+3346632 MS.gene051960:CDS
AAAGCGCCATGGGAAAATGT+TGG 0.592260 2.2:+3346877 MS.gene051960:CDS
GGGAATGGCAGTATGGCAAA+CGG 0.592556 2.2:-3347064 None:intergenic
GACATTGGTGTTGGAATCAG+CGG 0.594017 2.2:+3349535 MS.gene051960:CDS
AAAACTCCAAGTGAAATGAC+AGG 0.594056 2.2:-3350831 None:intergenic
AAAAGCTCCATCATTATCAA+GGG 0.594733 2.2:-3346071 None:intergenic
AGTATATGACCAGGATCAAG+AGG 0.594911 2.2:-3346184 None:intergenic
CTCCAGATTCATCAATTGTG+AGG 0.595088 2.2:-3348593 None:intergenic
AGAAATCAAGTACTACAAGA+AGG 0.595367 2.2:+3351458 MS.gene051960:CDS
ACTTGCTGCAGCAAAGCAGA+TGG 0.595451 2.2:+3346795 MS.gene051960:CDS
ATTAACGCAAAAGCGGCATG+TGG 0.596240 2.2:-3348622 None:intergenic
GATTGGATTCACAGCAAGAG+TGG 0.596498 2.2:+3351539 MS.gene051960:CDS
GGAGGATTAGGGCAAAGCTC+CGG 0.600021 2.2:+3345444 MS.gene051960:CDS
TGTGGGGCTTAGTATGGCAA+AGG 0.600655 2.2:+3345778 MS.gene051960:CDS
GGATTAGGGCAAAGCTCCGG+TGG 0.600898 2.2:+3345447 MS.gene051960:CDS
GCTGTTTGAACAGTTTCGAA+GGG 0.601231 2.2:+3345661 MS.gene051960:CDS
TTGCCCACATATCGTTCCAA+AGG 0.603188 2.2:+3351403 MS.gene051960:CDS
AAGTGGATGAGGCACCTCAT+CGG 0.603335 2.2:-3345510 None:intergenic
CGAGGATGGGATATGCTATG+TGG 0.604088 2.2:+3345985 MS.gene051960:CDS
ACACCTTTGGAACGATATGT+GGG 0.604290 2.2:-3351406 None:intergenic
TACACGGTTCTCGAGTAACC+GGG 0.605561 2.2:-3345539 None:intergenic
GCTAGTTTCCATAAAGGCAA+TGG 0.605915 2.2:+3345857 MS.gene051960:CDS
TGTTACTTCTAAGGATGGTG+AGG 0.606553 2.2:+3346930 MS.gene051960:CDS
TGACAAGGAAGAAGATGGCG+AGG 0.606726 2.2:-3351062 None:intergenic
ACAATTGATGAATCTGGAGA+AGG 0.607285 2.2:+3348597 MS.gene051960:CDS
GCCCTAATCCTCCTCACCCG+TGG 0.608679 2.2:-3345434 None:intergenic
GGTGATGGTGCAAATGATGT+TGG 0.612028 2.2:+3349496 MS.gene051960:CDS
CCTTGGAGGTAAGATGCCAC+GGG 0.614355 2.2:+3345418 None:intergenic
AATTTCCCCATGCAAAAGAA+GGG 0.615464 2.2:+3346853 MS.gene051960:CDS
AGCCCCACAACAAAAGCCAA+AGG 0.617159 2.2:-3345764 None:intergenic
TGCTGTCCAATAAATAGGAG+CGG 0.618500 2.2:-3351343 None:intergenic
TCTATTGTCTTCAAGTTACG+AGG 0.621402 2.2:+3345967 MS.gene051960:CDS
ACCACTTTAGCAATAGGTGA+TGG 0.621811 2.2:+3349481 MS.gene051960:CDS
GTGAAATTGGTGATAACGAG+AGG 0.622920 2.2:-3345715 None:intergenic
TAGAGAGGCAATGCTTGAGA+AGG 0.624541 2.2:+3347991 MS.gene051960:CDS
CATGGAAGATGATGATGACA+AGG 0.626795 2.2:-3351077 None:intergenic
TCCTGAGCTTTGAATCTCGG+AGG 0.627979 2.2:-3346207 None:intergenic
CTATGCTGCCCCACACAAAG+AGG 0.628115 2.2:-3351230 None:intergenic
GAAGAAGCAAACATCAGGAG+GGG 0.629665 2.2:+3351596 MS.gene051960:CDS
AAGATGTTAAGGTTAATCGC+CGG 0.632395 2.2:+3345831 MS.gene051960:CDS
TATGGCAAAGGAAGCACTGG+AGG 0.633216 2.2:+3345790 MS.gene051960:CDS
GGAAGACAAGCTGCAGAAAG+GGG 0.634885 2.2:+3348063 MS.gene051960:CDS
TTGACCAGAGAAGCCCGCAA+AGG 0.638038 2.2:-3350754 None:intergenic
ACTGGTATAGAATATTGGGA+TGG 0.638599 2.2:+3351016 MS.gene051960:CDS
GCATGTAGTTTACTTCGACA+GGG 0.639480 2.2:+3348386 MS.gene051960:CDS
GGTTAGTGAAAGAAGGAACT+GGG 0.639797 2.2:+3349455 MS.gene051960:CDS
TTCACTGGAACGTACACCAT+AGG 0.641957 2.2:-3346767 None:intergenic
GACAAGGAAGAAGATGGCGA+GGG 0.645828 2.2:-3351061 None:intergenic
TTAACGCAAAAGCGGCATGT+GGG 0.646609 2.2:-3348621 None:intergenic
ACTGCAGACATGGCTGCTGT+TGG 0.647157 2.2:+3351126 MS.gene051960:CDS
GTGATTGTACGTGATGAGGA+GGG 0.649981 2.2:+3347457 MS.gene051960:CDS
AGAAGAAGCAAACATCAGGA+GGG 0.655726 2.2:+3351595 MS.gene051960:CDS
TACGCAGTCATGGAATAATG+TGG 0.657449 2.2:-3351294 None:intergenic
ATGATTCAAGAAGCTGACAT+TGG 0.657865 2.2:+3349520 MS.gene051960:CDS
CCGTAAATACCACCACTTTG+GGG 0.659464 2.2:-3346425 None:intergenic
TCTCGGAGGAGTATATGACC+AGG 0.659575 2.2:-3346193 None:intergenic
TCGGCCGAATACTGCCGATG+AGG 0.665802 2.2:+3345496 MS.gene051960:CDS
GATGGCTACTGATCTTGAGG+AGG 0.666362 2.2:+3346813 MS.gene051960:CDS
AGTGATTGTACGTGATGAGG+AGG 0.670383 2.2:+3347456 MS.gene051960:CDS
CAAGATCTGGGTCTTGACAG+GGG 0.672992 2.2:+3348205 MS.gene051960:CDS
ACGTTGAAGATCAACACATG+TGG 0.677362 2.2:+3351481 MS.gene051960:CDS
CCTCAAAATAGAATATTGTG+AGG 0.679982 2.2:-3350731 None:intergenic
AGTATGAGACCCCAAAGTGG+TGG 0.682190 2.2:+3346416 MS.gene051960:CDS
GCATTTGAATGAATATGGAG+AGG 0.682818 2.2:+3347865 MS.gene051960:CDS
AAAGGAGCAATCATGCTCAG+TGG 0.685530 2.2:-3345746 None:intergenic
GTCAGTGATTGTACGTGATG+AGG 0.686537 2.2:+3347453 MS.gene051960:CDS
TTTCCTGCACTATATCAGCA+AGG 0.687834 2.2:+3350973 MS.gene051960:CDS
CACAGAGTATGTCTATGGGG+TGG 0.689000 2.2:+3346231 MS.gene051960:CDS
ACATGTATGATGAAGAAACC+GGG 0.695846 2.2:+3346614 MS.gene051960:CDS
GAACACAGAGTATGTCTATG+GGG 0.698396 2.2:+3346228 MS.gene051960:CDS
ATACAACACCTCTTTGTGTG+GGG 0.702634 2.2:+3351222 MS.gene051960:CDS
AGATCAACACATGTGGACGA+GGG 0.705427 2.2:+3351488 MS.gene051960:CDS
GATGATGCAGGTGAACATTG+TGG 0.714432 2.2:-3351151 None:intergenic
CTAAGTATGAGACCCCAAAG+TGG 0.739086 2.2:+3346413 MS.gene051960:CDS
CATTGGTGTTGGAATCAGCG+GGG 0.762337 2.2:+3349537 MS.gene051960:CDS
AAGCACTGGAGGATTCACGT+AGG 0.764698 2.2:+3345801 MS.gene051960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTAAAATATTTTACTA+TGG + chr2.2:3349983-3350002 MS.gene051960:intron 10.0%
!! TAGTATTGTTTGTATTAAAT+TGG - chr2.2:3350076-3350095 None:intergenic 15.0%
!! TATTTAGTTAAAATCTATGT+TGG + chr2.2:3350290-3350309 MS.gene051960:intron 15.0%
!!! AAAATAAAGATTTCTTTTCA+TGG - chr2.2:3345583-3345602 None:intergenic 15.0%
!!! AGATTTTATATAGTATAAGT+AGG + chr2.2:3349172-3349191 MS.gene051960:intron 15.0%
!! AAACATAATAGCATTGTATT+TGG - chr2.2:3345630-3345649 None:intergenic 20.0%
!! ACACAAAAATAAACAAACAT+CGG - chr2.2:3347364-3347383 None:intergenic 20.0%
!! AGTAAATACTAAATTTAGAC+TGG - chr2.2:3350028-3350047 None:intergenic 20.0%
!! ATATCATTTATTAGTTCAGT+AGG + chr2.2:3346376-3346395 MS.gene051960:CDS 20.0%
!! CATAAAAAATCAGTTTAGAT+GGG - chr2.2:3350668-3350687 None:intergenic 20.0%
!! TAATAAATGATATCGCTATA+AGG - chr2.2:3346369-3346388 None:intergenic 20.0%
!! TTCTACAAAAATATAGCATT+TGG + chr2.2:3350708-3350727 MS.gene051960:CDS 20.0%
!! TTTGTACGTGAAAAAATTAT+AGG - chr2.2:3348131-3348150 None:intergenic 20.0%
!!! CTGATCAATGTTTTAAATTT+AGG + chr2.2:3350178-3350197 MS.gene051960:intron 20.0%
!!! GTTTGTTTATTTTTGTGTTT+CGG + chr2.2:3347366-3347385 MS.gene051960:intron 20.0%
!!! TACAAATTTTTATTCTTCTC+AGG + chr2.2:3348145-3348164 MS.gene051960:intron 20.0%
! AAAAATTTACTATTTCGCCA+TGG + chr2.2:3348497-3348516 MS.gene051960:intron 25.0%
! AAAATTATAACTGCAAATGG+TGG + chr2.2:3349610-3349629 MS.gene051960:intron 25.0%
! ACTGTACAACAAGAAAATAA+TGG - chr2.2:3347789-3347808 None:intergenic 25.0%
! AGGTTTATGAAATCAAAACT+TGG - chr2.2:3349702-3349721 None:intergenic 25.0%
! CACAAAATTATAACTGCAAA+TGG + chr2.2:3349607-3349626 MS.gene051960:intron 25.0%
! CATCTATATATCTCATATGT+AGG - chr2.2:3348960-3348979 None:intergenic 25.0%
! GCATAAAAAATCAGTTTAGA+TGG - chr2.2:3350669-3350688 None:intergenic 25.0%
! TAAACAAACATCGGATATTA+CGG - chr2.2:3347355-3347374 None:intergenic 25.0%
! TAATAAGAACATCACCAAAA+AGG - chr2.2:3349811-3349830 None:intergenic 25.0%
! TCAAATTTGAATGAAGAGTT+GGG + chr2.2:3346658-3346677 MS.gene051960:CDS 25.0%
! TGTAGAAGAAATAACATATC+TGG - chr2.2:3350695-3350714 None:intergenic 25.0%
! TGTTATTGAAATACTTCTGT+AGG + chr2.2:3349148-3349167 MS.gene051960:intron 25.0%
! TTCTGTTTATTGAACATATG+AGG + chr2.2:3347541-3347560 MS.gene051960:intron 25.0%
! TTTGACTGGTATAGAATATT+GGG + chr2.2:3351012-3351031 MS.gene051960:CDS 25.0%
! TTTGATAGACTATCTAAGAA+TGG + chr2.2:3347815-3347834 MS.gene051960:CDS 25.0%
!! AACATTATTCTTTTCTGCAA+AGG + chr2.2:3347481-3347500 MS.gene051960:CDS 25.0%
!! CAGTCAAAGAACAAATTTTT+GGG - chr2.2:3351000-3351019 None:intergenic 25.0%
!! GATATCAAACACCAATTTTT+GGG + chr2.2:3348682-3348701 MS.gene051960:CDS 25.0%
!! TACCTGTTTCTCTTATTATA+TGG + chr2.2:3351261-3351280 MS.gene051960:CDS 25.0%
!! TGATATCAAACACCAATTTT+TGG + chr2.2:3348681-3348700 MS.gene051960:CDS 25.0%
!! TGCTAATATATACTTCCTTT+TGG + chr2.2:3345685-3345704 MS.gene051960:CDS 25.0%
!! TTCATATTTTCATCCATGTT+TGG + chr2.2:3350916-3350935 MS.gene051960:intron 25.0%
!!! AAATTGATTGACTTGTTGAT+TGG + chr2.2:3350235-3350254 MS.gene051960:intron 25.0%
!!! AACAATTAAGAAGTGTTTAC+AGG - chr2.2:3350316-3350335 None:intergenic 25.0%
!!! AAGTCATTTTGTTGTTTTTC+CGG + chr2.2:3347034-3347053 MS.gene051960:CDS 25.0%
!!! TAAGAATGGAAAGAAGTATT+TGG + chr2.2:3347829-3347848 MS.gene051960:CDS 25.0%
!!! TGCTATTATGTTTTTTCCTA+AGG + chr2.2:3345637-3345656 MS.gene051960:CDS 25.0%
AAAAGAAAAAAGATCCTACC+AGG - chr2.2:3348765-3348784 None:intergenic 30.0%
AAAAGCTCCATCATTATCAA+GGG - chr2.2:3346074-3346093 None:intergenic 30.0%
AAAGAAAAAAGATCCTACCA+GGG - chr2.2:3348764-3348783 None:intergenic 30.0%
AAAGTGTAAAGATTGGGATT+TGG - chr2.2:3346130-3346149 None:intergenic 30.0%
AACAAAATGACTTCAGCATT+GGG - chr2.2:3347027-3347046 None:intergenic 30.0%
AACGTAGAACAATCAAAGAA+GGG - chr2.2:3349957-3349976 None:intergenic 30.0%
AAGCAGAATAGAGAAAAAGA+TGG + chr2.2:3346315-3346334 MS.gene051960:CDS 30.0%
AAGTGTAAAGATTGGGATTT+GGG - chr2.2:3346129-3346148 None:intergenic 30.0%
AATCACCATGTCATATTTCT+TGG + chr2.2:3347329-3347348 MS.gene051960:intron 30.0%
AATTGAAACATAGAGAGAGA+TGG - chr2.2:3346548-3346567 None:intergenic 30.0%
AGAAACCAGAAAGATACAAA+GGG - chr2.2:3348788-3348807 None:intergenic 30.0%
AGAAATCAAGTACTACAAGA+AGG + chr2.2:3351458-3351477 MS.gene051960:CDS 30.0%
AGAATTGCACAAATGGTAAT+TGG + chr2.2:3350520-3350539 MS.gene051960:intron 30.0%
AGTATTTCAATAACAGTGCA+TGG - chr2.2:3349143-3349162 None:intergenic 30.0%
ATACTGATATTCAATCTGGT+CGG - chr2.2:3346452-3346471 None:intergenic 30.0%
ATCAAAACCAAATCCCTTTA+TGG - chr2.2:3346968-3346987 None:intergenic 30.0%
ATCACTGCTCTTATTCTTTA+TGG + chr2.2:3346511-3346530 MS.gene051960:CDS 30.0%
ATCTATCATGTTTACATGTG+TGG + chr2.2:3349760-3349779 MS.gene051960:intron 30.0%
ATGAAAATATGAAACCCACA+AGG - chr2.2:3350909-3350928 None:intergenic 30.0%
ATGTTACATGCTTTCCAAAT+AGG - chr2.2:3350375-3350394 None:intergenic 30.0%
ATTGAAACATAGAGAGAGAT+GGG - chr2.2:3346547-3346566 None:intergenic 30.0%
CAATATTTGTGTAAGTAGCA+TGG - chr2.2:3349038-3349057 None:intergenic 30.0%
CCTCAAAATAGAATATTGTG+AGG - chr2.2:3350734-3350753 None:intergenic 30.0%
CTTTGACTGGTATAGAATAT+TGG + chr2.2:3351011-3351030 MS.gene051960:CDS 30.0%
GATCAATTAAGACCTTCTAT+CGG + chr2.2:3347569-3347588 MS.gene051960:intron 30.0%
GATCATACTGATATTCAATC+TGG - chr2.2:3346456-3346475 None:intergenic 30.0%
GATGTTAGATGGGAAAAATT+AGG + chr2.2:3349098-3349117 MS.gene051960:intron 30.0%
GATTAACCTTAACATCTTGA+AGG - chr2.2:3345829-3345848 None:intergenic 30.0%
GCATGTAACAGTTACTAAAA+TGG - chr2.2:3351370-3351389 None:intergenic 30.0%
GGAAGTTATATAACTCAATC+TGG + chr2.2:3350399-3350418 MS.gene051960:intron 30.0%
GGATATAGTGAAAGTAGAAA+AGG + chr2.2:3345919-3345938 MS.gene051960:CDS 30.0%
GTACAGTGATAGTACTTATA+CGG - chr2.2:3349362-3349381 None:intergenic 30.0%
GTATAAAATACTGAATCTGC+TGG + chr2.2:3347405-3347424 MS.gene051960:CDS 30.0%
GTCAAATTTGAATGAAGAGT+TGG + chr2.2:3346657-3346676 MS.gene051960:CDS 30.0%
GTCAATAATTAACGCAAAAG+CGG - chr2.2:3348632-3348651 None:intergenic 30.0%
TAAAAGCTCCATCATTATCA+AGG - chr2.2:3346075-3346094 None:intergenic 30.0%
TAACAGCTAATCCCAAAAAT+TGG - chr2.2:3348696-3348715 None:intergenic 30.0%
TAGAAACCAGAAAGATACAA+AGG - chr2.2:3348789-3348808 None:intergenic 30.0%
TATAGAATATTGGGATGGAT+GGG + chr2.2:3351021-3351040 MS.gene051960:CDS 30.0%
TCAACAAAACGTTCATATCA+TGG - chr2.2:3350119-3350138 None:intergenic 30.0%
TCAGTTTAGATGGGAAATAT+TGG - chr2.2:3350659-3350678 None:intergenic 30.0%
TCTAGGCATTTGAATGAATA+TGG + chr2.2:3347860-3347879 MS.gene051960:CDS 30.0%
TCTTGTAGTACTTGATTTCT+TGG - chr2.2:3351458-3351477 None:intergenic 30.0%
TGCCATATAATAAGAGAAAC+AGG - chr2.2:3351266-3351285 None:intergenic 30.0%
TTACAAGAGAATTGCACAAA+TGG + chr2.2:3350513-3350532 MS.gene051960:CDS 30.0%
TTTCTTCATCATACATGTGA+AGG - chr2.2:3346612-3346631 None:intergenic 30.0%
! AAACACGTGTTTTTCCTATT+TGG + chr2.2:3350358-3350377 MS.gene051960:intron 30.0%
! AAAGAGAGTTGATTCTTGTT+GGG + chr2.2:3348029-3348048 MS.gene051960:CDS 30.0%
! ACTTTTCCATTGCTCAATTT+CGG + chr2.2:3350452-3350471 MS.gene051960:CDS 30.0%
! ATCTTCATTCCTCAATCTTT+TGG + chr2.2:3349419-3349438 MS.gene051960:intron 30.0%
! CAACACTAAAAGTATGAAGT+CGG + chr2.2:3349382-3349401 MS.gene051960:intron 30.0%
! CATGCTACTTACACAAATAT+TGG + chr2.2:3349036-3349055 MS.gene051960:intron 30.0%
! CCAAAAATTTGTTCTTTGAC+TGG + chr2.2:3350998-3351017 MS.gene051960:CDS 30.0%
! CCAACAAAAGTGTAAAGATT+GGG - chr2.2:3346136-3346155 None:intergenic 30.0%
! CCAATCTTTACACTTTTGTT+GGG + chr2.2:3346134-3346153 MS.gene051960:CDS 30.0%
! CCAGTCAAAGAACAAATTTT+TGG - chr2.2:3351001-3351020 None:intergenic 30.0%
! CCTCACAATATTCTATTTTG+AGG + chr2.2:3350731-3350750 MS.gene051960:CDS 30.0%
! CTATTCTGCTTCTTTTTGAA+GGG - chr2.2:3346306-3346325 None:intergenic 30.0%
! GATTTCTTTTCATGGATTTG+AGG - chr2.2:3345575-3345594 None:intergenic 30.0%
! GCTTTTGCGTTAATTATTGA+CGG + chr2.2:3348631-3348650 MS.gene051960:CDS 30.0%
! GTCAATCGGTTTATAATGAT+TGG + chr2.2:3350772-3350791 MS.gene051960:CDS 30.0%
! TCTATTCTGCTTCTTTTTGA+AGG - chr2.2:3346307-3346326 None:intergenic 30.0%
!! ATGATATGAACGTTTTGTTG+AGG + chr2.2:3350118-3350137 MS.gene051960:intron 30.0%
!! GGTTAAAGTTCCAGTTTTAT+CGG - chr2.2:3346704-3346723 None:intergenic 30.0%
!! TATTCTGCTTCTTTTTGAAG+GGG - chr2.2:3346305-3346324 None:intergenic 30.0%
!! TGATAATGATGGAGCTTTTA+AGG + chr2.2:3346075-3346094 MS.gene051960:CDS 30.0%
AAAACTCCAAGTGAAATGAC+AGG - chr2.2:3350834-3350853 None:intergenic 35.0%
AACTTTAACCTGCAATCAGA+TGG + chr2.2:3346714-3346733 MS.gene051960:CDS 35.0%
AAGATGTTAAGGTTAATCGC+CGG + chr2.2:3345831-3345850 MS.gene051960:CDS 35.0%
AATTTCCCCATGCAAAAGAA+GGG + chr2.2:3346853-3346872 MS.gene051960:CDS 35.0%
ACAATTGATGAATCTGGAGA+AGG + chr2.2:3348597-3348616 MS.gene051960:CDS 35.0%
ACATGTATGATGAAGAAACC+GGG + chr2.2:3346614-3346633 MS.gene051960:CDS 35.0%
ACTGGTATAGAATATTGGGA+TGG + chr2.2:3351016-3351035 MS.gene051960:CDS 35.0%
AGTATTCCCGAAGAAAAAAC+CGG - chr2.2:3347289-3347308 None:intergenic 35.0%
AGTATTTGGAGACTACTTCT+AGG + chr2.2:3347843-3347862 MS.gene051960:CDS 35.0%
ATAGAATATTGGGATGGATG+GGG + chr2.2:3351022-3351041 MS.gene051960:CDS 35.0%
ATCACCAAACTCATTTGAAG+AGG - chr2.2:3348335-3348354 None:intergenic 35.0%
ATGATTCAAGAAGCTGACAT+TGG + chr2.2:3349520-3349539 MS.gene051960:CDS 35.0%
ATGGAAACTGCAATCAACAT+TGG + chr2.2:3348233-3348252 MS.gene051960:CDS 35.0%
ATGGATGTCAAAGTTTAGAG+AGG - chr2.2:3347770-3347789 None:intergenic 35.0%
ATGGTTGCTGTCCAATAAAT+AGG - chr2.2:3351351-3351370 None:intergenic 35.0%
ATTCATCAATTGTGAGGCAT+TGG - chr2.2:3348590-3348609 None:intergenic 35.0%
CAAAAACCGAAATTGAGCAA+TGG - chr2.2:3350461-3350480 None:intergenic 35.0%
CAACAAAATGACTTCAGCAT+TGG - chr2.2:3347028-3347047 None:intergenic 35.0%
CAAGCACTTCAACCAATATT+TGG - chr2.2:3351320-3351339 None:intergenic 35.0%
CACATGTATGATGAAGAAAC+CGG + chr2.2:3346613-3346632 MS.gene051960:CDS 35.0%
CAGAATCAGTGATCAATGAT+GGG + chr2.2:3348441-3348460 MS.gene051960:CDS 35.0%
CAGTATGATCCTAAGAAACT+TGG + chr2.2:3346466-3346485 MS.gene051960:CDS 35.0%
CTCTCTCTATGTTTCAATTG+AGG + chr2.2:3346549-3346568 MS.gene051960:CDS 35.0%
CTTGAAGGTGAAAAGATCAT+TGG + chr2.2:3346036-3346055 MS.gene051960:CDS 35.0%
GAACGTAGAACAATCAAAGA+AGG - chr2.2:3349958-3349977 None:intergenic 35.0%
GCAAGTTTATCAATGCATTG+AGG - chr2.2:3348173-3348192 None:intergenic 35.0%
GCATTTGAATGAATATGGAG+AGG + chr2.2:3347865-3347884 MS.gene051960:CDS 35.0%
GCTCTATGTTGATGTTAGAT+GGG + chr2.2:3349088-3349107 MS.gene051960:intron 35.0%
GTAACAAGGTTAGTGAAAGA+AGG + chr2.2:3349448-3349467 MS.gene051960:CDS 35.0%
GTATAGAATATTGGGATGGA+TGG + chr2.2:3351020-3351039 MS.gene051960:CDS 35.0%
GTGGAAACCATGAATTTAGA+TGG + chr2.2:3346004-3346023 MS.gene051960:CDS 35.0%
TAAAATCCTCTTCAAGCTTG+TGG + chr2.2:3347607-3347626 MS.gene051960:intron 35.0%
TAATTTCCCCATGCAAAAGA+AGG + chr2.2:3346852-3346871 MS.gene051960:CDS 35.0%
TACTGATATTCAATCTGGTC+GGG - chr2.2:3346451-3346470 None:intergenic 35.0%
TAGACAGAAGTCACATTACT+AGG - chr2.2:3347521-3347540 None:intergenic 35.0%
TAGATGGGAAAAATTAGGTG+TGG + chr2.2:3349103-3349122 MS.gene051960:intron 35.0%
TAGGTTCCTTCAAGATGTTA+AGG + chr2.2:3345820-3345839 MS.gene051960:CDS 35.0%
TCAGAATCAGTGATCAATGA+TGG + chr2.2:3348440-3348459 MS.gene051960:CDS 35.0%
TCCATCATTATCAAGGGAAA+AGG - chr2.2:3346068-3346087 None:intergenic 35.0%
TGAAATGCAGATAGTGTTGT+GGG - chr2.2:3348284-3348303 None:intergenic 35.0%
TGAAGTCTATTGTGCATTTC+CGG + chr2.2:3347267-3347286 MS.gene051960:intron 35.0%
TGGAAACTGCAATCAACATT+GGG + chr2.2:3348234-3348253 MS.gene051960:CDS 35.0%
TGGATAATGTGATGATCCAT+GGG - chr2.2:3351438-3351457 None:intergenic 35.0%
TGTAAAATGGCTCATTGTCA+AGG - chr2.2:3351199-3351218 None:intergenic 35.0%
TGTTTCAATTGAGGTTGTGA+AGG + chr2.2:3346558-3346577 MS.gene051960:CDS 35.0%
TTACTATGGAGAACCATATG+AGG + chr2.2:3349997-3350016 MS.gene051960:intron 35.0%
TTCTGCTCAATCTAAGTGAA+AGG - chr2.2:3348478-3348497 None:intergenic 35.0%
TTGAAATGCAGATAGTGTTG+TGG - chr2.2:3348285-3348304 None:intergenic 35.0%
TTGAATGAATATGGAGAGGT+GGG + chr2.2:3347869-3347888 MS.gene051960:CDS 35.0%
TTGATGTTGAAACCGATAGA+AGG - chr2.2:3347584-3347603 None:intergenic 35.0%
TTGGATAATGTGATGATCCA+TGG - chr2.2:3351439-3351458 None:intergenic 35.0%
TTTACACGTTTGGTTGTCTT+CGG + chr2.2:3345477-3345496 MS.gene051960:CDS 35.0%
TTTGAATGAATATGGAGAGG+TGG + chr2.2:3347868-3347887 MS.gene051960:CDS 35.0%
! AAGAGAGTTGATTCTTGTTG+GGG + chr2.2:3348030-3348049 MS.gene051960:CDS 35.0%
! ACAGTTGTTACTTCTAAGGA+TGG + chr2.2:3346925-3346944 MS.gene051960:CDS 35.0%
! ATTGATAAACTTGCTCAAGC+TGG + chr2.2:3348179-3348198 MS.gene051960:CDS 35.0%
! CAATCTGGCAAATTCTTTTC+AGG + chr2.2:3350414-3350433 MS.gene051960:intron 35.0%
! CATTGCTCAATTTCGGTTTT+TGG + chr2.2:3350459-3350478 MS.gene051960:CDS 35.0%
! CCCAACAAAAGTGTAAAGAT+TGG - chr2.2:3346137-3346156 None:intergenic 35.0%
! CCCAATCTTTACACTTTTGT+TGG + chr2.2:3346133-3346152 MS.gene051960:CDS 35.0%
! CGACTTCATACTTTTAGTGT+TGG - chr2.2:3349384-3349403 None:intergenic 35.0%
! CTAAGAAACTTGGATTTGCT+GGG + chr2.2:3346476-3346495 MS.gene051960:CDS 35.0%
! CTTTTCCCTTTGTATCTTTC+TGG + chr2.2:3348780-3348799 MS.gene051960:intron 35.0%
! GAAAGAGAGTTGATTCTTGT+TGG + chr2.2:3348028-3348047 MS.gene051960:CDS 35.0%
! GATTTCTTGTCAAGCCTTTT+TGG + chr2.2:3349794-3349813 MS.gene051960:intron 35.0%
! GGTGTTGTATCCATGTAAAA+TGG - chr2.2:3351212-3351231 None:intergenic 35.0%
! GTTTTCTTGAAATGCCTTGT+GGG + chr2.2:3350892-3350911 MS.gene051960:intron 35.0%
! TCTATTGTCTTCAAGTTACG+AGG + chr2.2:3345967-3345986 MS.gene051960:CDS 35.0%
! TGAGACAGTTGTTACTTCTA+AGG + chr2.2:3346921-3346940 MS.gene051960:CDS 35.0%
! TGATCTTTTCACCTTCAAGT+TGG - chr2.2:3346035-3346054 None:intergenic 35.0%
! TGGAAAGCATGTAACATGTA+TGG + chr2.2:3350378-3350397 MS.gene051960:intron 35.0%
! TGTTTTCTTGAAATGCCTTG+TGG + chr2.2:3350891-3350910 MS.gene051960:intron 35.0%
!! ATGAACAAGAGTACTCTGAT+TGG + chr2.2:3347927-3347946 MS.gene051960:CDS 35.0%
!! CTTTATGGAAACTAGCTTTC+CGG - chr2.2:3345853-3345872 None:intergenic 35.0%
!! TGACAATGAGCCATTTTACA+TGG + chr2.2:3351199-3351218 MS.gene051960:CDS 35.0%
!! TGAGAAGGTATCAGATAGTA+TGG + chr2.2:3348006-3348025 MS.gene051960:CDS 35.0%
!!! ACCTTTTCCCTTGATAATGA+TGG + chr2.2:3346064-3346083 MS.gene051960:CDS 35.0%
!!! ATTCTATTTTGAGGCCTTTG+CGG + chr2.2:3350740-3350759 MS.gene051960:CDS 35.0%
!!! TGCATTTCCGGTTTTTTCTT+CGG + chr2.2:3347279-3347298 MS.gene051960:intron 35.0%
AAACCAAATCCCTTTATGGC+AGG - chr2.2:3346964-3346983 None:intergenic 40.0%
AACGATATGTGGGCAAGATA+AGG - chr2.2:3351399-3351418 None:intergenic 40.0%
AAGCTGAATCACCTGATGAA+GGG + chr2.2:3347121-3347140 MS.gene051960:CDS 40.0%
AAGGTCTTGGTTAATGAACC+TGG - chr2.2:3346593-3346612 None:intergenic 40.0%
AATGTTCACCTGCATCATCT+GGG + chr2.2:3351155-3351174 MS.gene051960:CDS 40.0%
AATTTCTGCTTCTGGACAAG+TGG + chr2.2:3347221-3347240 MS.gene051960:CDS 40.0%
ACAGCCTCTTCAAATGAGTT+TGG + chr2.2:3348328-3348347 MS.gene051960:intron 40.0%
ACCAATTACCATTCATGAGC+CGG - chr2.2:3346996-3347015 None:intergenic 40.0%
ACCACTTTAGCAATAGGTGA+TGG + chr2.2:3349481-3349500 MS.gene051960:CDS 40.0%
ACCATAGGAAATTCCAGCAA+TGG - chr2.2:3346755-3346774 None:intergenic 40.0%
ACCATCACCTATTGCTAAAG+TGG - chr2.2:3349485-3349504 None:intergenic 40.0%
ACCTGTAAGCAAACTTCAGA+TGG - chr2.2:3350870-3350889 None:intergenic 40.0%
ACGTTGAAGATCAACACATG+TGG + chr2.2:3351481-3351500 MS.gene051960:CDS 40.0%
AGAAAGCTAAGACAGCTGTT+GGG + chr2.2:3347963-3347982 MS.gene051960:CDS 40.0%
AGAAGAAGCAAACATCAGGA+GGG + chr2.2:3351595-3351614 MS.gene051960:CDS 40.0%
AGGAACACAGAGTATGTCTA+TGG + chr2.2:3346226-3346245 MS.gene051960:CDS 40.0%
AGGTTAGTGAAAGAAGGAAC+TGG + chr2.2:3349454-3349473 MS.gene051960:CDS 40.0%
AGTATATGACCAGGATCAAG+AGG - chr2.2:3346187-3346206 None:intergenic 40.0%
ATACAACACCTCTTTGTGTG+GGG + chr2.2:3351222-3351241 MS.gene051960:CDS 40.0%
ATACTTCAGTGCCATAGCAA+TGG + chr2.2:3349198-3349217 MS.gene051960:intron 40.0%
ATCAAGCTTTCTGTAAGCCA+GGG - chr2.2:3347909-3347928 None:intergenic 40.0%
ATGCATTACTGTCCTTGAAC+AGG - chr2.2:3350606-3350625 None:intergenic 40.0%
CAAAAACGCCATTGCCTTTA+TGG - chr2.2:3345868-3345887 None:intergenic 40.0%
CAAAAAGTCCATCTGATTGC+AGG - chr2.2:3346725-3346744 None:intergenic 40.0%
CAAGTCGTGGCAGAAAATTA+TGG + chr2.2:3345892-3345911 MS.gene051960:CDS 40.0%
CAATATTTGGTACGCAGTCA+TGG - chr2.2:3351307-3351326 None:intergenic 40.0%
CATCATACATGTGAAGGTCT+TGG - chr2.2:3346606-3346625 None:intergenic 40.0%
CATGACTGCGTACCAAATAT+TGG + chr2.2:3351305-3351324 MS.gene051960:CDS 40.0%
CATGGATTCCATCTGATGTT+AGG + chr2.2:3348515-3348534 MS.gene051960:intron 40.0%
CCAGCAAATCCAAGTTTCTT+AGG - chr2.2:3346478-3346497 None:intergenic 40.0%
CCATGGGATTAAAACACCTT+TGG - chr2.2:3351422-3351441 None:intergenic 40.0%
CCTAAGAAACTTGGATTTGC+TGG + chr2.2:3346475-3346494 MS.gene051960:CDS 40.0%
CGTGGCAGAAAATTATGGTT+GGG + chr2.2:3345897-3345916 MS.gene051960:CDS 40.0%
CTAACATCAGATGGAATCCA+TGG - chr2.2:3348517-3348536 None:intergenic 40.0%
CTCCAGATTCATCAATTGTG+AGG - chr2.2:3348596-3348615 None:intergenic 40.0%
CTTGTAGCTGCTAGAGAATT+TGG + chr2.2:3347150-3347169 MS.gene051960:CDS 40.0%
GAAATGCAGATAGTGTTGTG+GGG - chr2.2:3348283-3348302 None:intergenic 40.0%
GAACACAGAGTATGTCTATG+GGG + chr2.2:3346228-3346247 MS.gene051960:CDS 40.0%
GAAGGTGAAAAGATCATTGG+AGG + chr2.2:3346039-3346058 MS.gene051960:CDS 40.0%
GAATAAGAGCAGTGATCAGA+TGG - chr2.2:3346507-3346526 None:intergenic 40.0%
GAGGTTGAGTTATCCAAACA+TGG - chr2.2:3350932-3350951 None:intergenic 40.0%
GATACAACACCTCTTTGTGT+GGG + chr2.2:3351221-3351240 MS.gene051960:CDS 40.0%
GATGATGACAAGGAAGAAGA+TGG - chr2.2:3351070-3351089 None:intergenic 40.0%
GCAAGACAGGAAACAAAGAT+TGG + chr2.2:3351522-3351541 MS.gene051960:CDS 40.0%
GCATGTAGTTTACTTCGACA+GGG + chr2.2:3348386-3348405 MS.gene051960:CDS 40.0%
GCTGTTTGAACAGTTTCGAA+GGG + chr2.2:3345661-3345680 MS.gene051960:CDS 40.0%
GGAACACAGAGTATGTCTAT+GGG + chr2.2:3346227-3346246 MS.gene051960:CDS 40.0%
GGCTCTATGTTGATGTTAGA+TGG + chr2.2:3349087-3349106 MS.gene051960:intron 40.0%
GGTCTCTCCATCTAAATTCA+TGG - chr2.2:3346014-3346033 None:intergenic 40.0%
GGTTAGTGAAAGAAGGAACT+GGG + chr2.2:3349455-3349474 MS.gene051960:CDS 40.0%
GTAGGCTTGATCATTACATG+TGG + chr2.2:3348085-3348104 MS.gene051960:intron 40.0%
GTGGCAGAAAATTATGGTTG+GGG + chr2.2:3345898-3345917 MS.gene051960:CDS 40.0%
TAAGAGAAACAGGTACCAAC+TGG - chr2.2:3351256-3351275 None:intergenic 40.0%
TACCTGATGCCAAAAGATTG+AGG - chr2.2:3349431-3349450 None:intergenic 40.0%
TACGCAGTCATGGAATAATG+TGG - chr2.2:3351297-3351316 None:intergenic 40.0%
TACGGCCAAGAAATATGACA+TGG - chr2.2:3347337-3347356 None:intergenic 40.0%
TACTTATACGGACTCCACTT+TGG - chr2.2:3349350-3349369 None:intergenic 40.0%
TCATATCATGGACAGCAGAT+AGG - chr2.2:3350107-3350126 None:intergenic 40.0%
TCCATTGCTGGAATTTCCTA+TGG + chr2.2:3346751-3346770 MS.gene051960:CDS 40.0%
TCGTGGCAGAAAATTATGGT+TGG + chr2.2:3345896-3345915 MS.gene051960:CDS 40.0%
TGCATGTAGTTTACTTCGAC+AGG + chr2.2:3348385-3348404 MS.gene051960:CDS 40.0%
TGCCTCACAATTGATGAATC+TGG + chr2.2:3348591-3348610 MS.gene051960:CDS 40.0%
TGCTGTCCAATAAATAGGAG+CGG - chr2.2:3351346-3351365 None:intergenic 40.0%
TGGAGCAATCTTTACACGTT+TGG + chr2.2:3345467-3345486 MS.gene051960:CDS 40.0%
TTTCCTGCACTATATCAGCA+AGG + chr2.2:3350973-3350992 MS.gene051960:CDS 40.0%
TTTCTTCGGGAATACTTGCT+AGG + chr2.2:3347293-3347312 MS.gene051960:intron 40.0%
TTTGAATGAAGAGTTGGGTC+AGG + chr2.2:3346663-3346682 MS.gene051960:CDS 40.0%
! ACTCTCGAGTTTGATAGCTT+AGG - chr2.2:3348867-3348886 None:intergenic 40.0%
! AGTGATCAATGATGGGAAAG+AGG + chr2.2:3348448-3348467 MS.gene051960:CDS 40.0%
! CATAAAGGCAATGGCGTTTT+TGG + chr2.2:3345866-3345885 MS.gene051960:CDS 40.0%
! CATGGAAGATGATGATGACA+AGG - chr2.2:3351080-3351099 None:intergenic 40.0%
! CGGAAAGCTAGTTTCCATAA+AGG + chr2.2:3345851-3345870 MS.gene051960:CDS 40.0%
! CTTTACCCTTCTTTTGCATG+GGG - chr2.2:3346861-3346880 None:intergenic 40.0%
! GCTAGTTTCCATAAAGGCAA+TGG + chr2.2:3345857-3345876 MS.gene051960:CDS 40.0%
! GCTATCAAACTCGAGAGTTT+TGG + chr2.2:3348869-3348888 MS.gene051960:intron 40.0%
! GCTTTACCCTTCTTTTGCAT+GGG - chr2.2:3346862-3346881 None:intergenic 40.0%
! GTGAAATTGGTGATAACGAG+AGG - chr2.2:3345718-3345737 None:intergenic 40.0%
! TCTTTTGGCATCAGGTAACA+AGG + chr2.2:3349434-3349453 MS.gene051960:intron 40.0%
! TGTCTTCAAGTTACGAGGAT+GGG + chr2.2:3345972-3345991 MS.gene051960:CDS 40.0%
! TGTTACTTCTAAGGATGGTG+AGG + chr2.2:3346930-3346949 MS.gene051960:CDS 40.0%
! TTCCTCAATCTTTTGGCATC+AGG + chr2.2:3349426-3349445 MS.gene051960:intron 40.0%
! TTCTTCGGGAATACTTGCTA+GGG + chr2.2:3347294-3347313 MS.gene051960:intron 40.0%
! TTGTCTTCAAGTTACGAGGA+TGG + chr2.2:3345971-3345990 MS.gene051960:CDS 40.0%
!! AAATTCTTTTCAGGCGGTGA+TGG + chr2.2:3350423-3350442 MS.gene051960:intron 40.0%
!! AACACCTTTGGAACGATATG+TGG - chr2.2:3351410-3351429 None:intergenic 40.0%
!! AACTGCAAATGGTGGATTAC+TGG + chr2.2:3349618-3349637 MS.gene051960:intron 40.0%
!! AAGTTCCAGTTTTATCGGAG+AGG - chr2.2:3346699-3346718 None:intergenic 40.0%
!! ACACCTTTGGAACGATATGT+GGG - chr2.2:3351409-3351428 None:intergenic 40.0%
!! AGTGGACTGAAAGGTGAAAT+TGG - chr2.2:3345731-3345750 None:intergenic 40.0%
!! CTCAATTTCGGTTTTTGGAG+CGG + chr2.2:3350464-3350483 MS.gene051960:CDS 40.0%
!! GGAGCTTTTAAGGATTTCTC+TGG + chr2.2:3346085-3346104 MS.gene051960:CDS 40.0%
!! TCTGGCAAATTCTTTTCAGG+CGG + chr2.2:3350417-3350436 MS.gene051960:intron 40.0%
!! TCTTTTCATGGATTTGAGGC+TGG - chr2.2:3345571-3345590 None:intergenic 40.0%
!! TGAGGTTGTGAAGGTATTAC+AGG + chr2.2:3346567-3346586 MS.gene051960:CDS 40.0%
!! TGTTCCTGAGCTTTGAATCT+CGG - chr2.2:3346213-3346232 None:intergenic 40.0%
!! TTTTGTTGTGGGGCTTAGTA+TGG + chr2.2:3345772-3345791 MS.gene051960:CDS 40.0%
!!! ATGTTGCTTTTGATTGCCTG+AGG - chr2.2:3348553-3348572 None:intergenic 40.0%
!!! CCAAAGGTGTTTTAATCCCA+TGG + chr2.2:3351419-3351438 MS.gene051960:CDS 40.0%
!!! GATTTGGTTTTGATGACAGC+CGG + chr2.2:3346974-3346993 MS.gene051960:CDS 40.0%
!!! GCATTTCCGGTTTTTTCTTC+GGG + chr2.2:3347280-3347299 MS.gene051960:intron 40.0%
!!! TGTTGCTTTTGATTGCCTGA+GGG - chr2.2:3348552-3348571 None:intergenic 40.0%
!!! TTCTATTTTGAGGCCTTTGC+GGG + chr2.2:3350741-3350760 MS.gene051960:CDS 40.0%
!!! TTTTTGAAGTGCTCCATTGC+TGG + chr2.2:3346739-3346758 MS.gene051960:CDS 40.0%
AAAGGAGCAATCATGCTCAG+TGG - chr2.2:3345749-3345768 None:intergenic 45.0%
AACTGTTCAAACAGCGCCTT+AGG - chr2.2:3345656-3345675 None:intergenic 45.0%
AAGATCAACACATGTGGACG+AGG + chr2.2:3351487-3351506 MS.gene051960:CDS 45.0%
ACAAGAAAAGCCCCTTCATC+AGG - chr2.2:3347135-3347154 None:intergenic 45.0%
ACCATCCTCTCCGATAAAAC+TGG + chr2.2:3346691-3346710 MS.gene051960:CDS 45.0%
ACGCTCACGACTTCATGTAA+TGG - chr2.2:3350146-3350165 None:intergenic 45.0%
ACGTGTAAAGATTGCTCCAC+CGG - chr2.2:3345466-3345485 None:intergenic 45.0%
ACTGAGCATGATTGCTCCTT+TGG + chr2.2:3345748-3345767 MS.gene051960:CDS 45.0%
AGATCAACACATGTGGACGA+GGG + chr2.2:3351488-3351507 MS.gene051960:CDS 45.0%
AGATGGAGAGACCAACTTGA+AGG + chr2.2:3346021-3346040 MS.gene051960:CDS 45.0%
AGCTGAATCACCTGATGAAG+GGG + chr2.2:3347122-3347141 MS.gene051960:CDS 45.0%
AGTGATTGTACGTGATGAGG+AGG + chr2.2:3347456-3347475 MS.gene051960:CDS 45.0%
ATACACGGTTCTCGAGTAAC+CGG - chr2.2:3345543-3345562 None:intergenic 45.0%
ATATTGGGATGGATGGGGAA+TGG + chr2.2:3351027-3351046 MS.gene051960:CDS 45.0%
ATTAACGCAAAAGCGGCATG+TGG - chr2.2:3348625-3348644 None:intergenic 45.0%
CAAACTCCACAAGCTTGAAG+AGG - chr2.2:3347616-3347635 None:intergenic 45.0%
CAAGAAGCTGACATTGGTGT+TGG + chr2.2:3349526-3349545 MS.gene051960:CDS 45.0%
CAATGTTCACCTGCATCATC+TGG + chr2.2:3351154-3351173 MS.gene051960:CDS 45.0%
CACACACAAGCTGTCATAGA+TGG + chr2.2:3347732-3347751 MS.gene051960:intron 45.0%
CACACATCCACACACATCAA+CGG - chr2.2:3349253-3349272 None:intergenic 45.0%
CAGAAAGCTAAGACAGCTGT+TGG + chr2.2:3347962-3347981 MS.gene051960:CDS 45.0%
CAGAAGAAGCAAACATCAGG+AGG + chr2.2:3351594-3351613 MS.gene051960:CDS 45.0%
CAGGTTTATCCTCTTGATCC+TGG + chr2.2:3346175-3346194 MS.gene051960:CDS 45.0%
CATCAAGCTTTCTGTAAGCC+AGG - chr2.2:3347910-3347929 None:intergenic 45.0%
CCCCAAAGTGGTGGTATTTA+CGG + chr2.2:3346425-3346444 MS.gene051960:CDS 45.0%
CCGTAAATACCACCACTTTG+GGG - chr2.2:3346428-3346447 None:intergenic 45.0%
CGCGAAAGAATTTCTGCTTC+TGG + chr2.2:3347213-3347232 MS.gene051960:CDS 45.0%
CGCTGTTTGAACAGTTTCGA+AGG + chr2.2:3345660-3345679 MS.gene051960:CDS 45.0%
CTAAGGATGGTGAGGATCAA+AGG + chr2.2:3346938-3346957 MS.gene051960:CDS 45.0%
CTAAGTATGAGACCCCAAAG+TGG + chr2.2:3346413-3346432 MS.gene051960:CDS 45.0%
CTGCAGAAGAAGCAAACATC+AGG + chr2.2:3351591-3351610 MS.gene051960:CDS 45.0%
CTTCTGGACAAGTGGTTGAA+AGG + chr2.2:3347229-3347248 MS.gene051960:CDS 45.0%
GAACTTTGAGTACGAACGTC+AGG + chr2.2:3346156-3346175 MS.gene051960:CDS 45.0%
GAAGAAGCAAACATCAGGAG+GGG + chr2.2:3351596-3351615 MS.gene051960:CDS 45.0%
GAAGCTGAATCACCTGATGA+AGG + chr2.2:3347120-3347139 MS.gene051960:CDS 45.0%
GACAATAGAAGCAAGTCAGC+TGG - chr2.2:3345956-3345975 None:intergenic 45.0%
GACCAAGCATTTCGTCTGAA+TGG + chr2.2:3351099-3351118 MS.gene051960:CDS 45.0%
GATCAAAGGCCTGCCATAAA+GGG + chr2.2:3346952-3346971 MS.gene051960:CDS 45.0%
GATGATGCAGGTGAACATTG+TGG - chr2.2:3351154-3351173 None:intergenic 45.0%
GATTGGATTCACAGCAAGAG+TGG + chr2.2:3351539-3351558 MS.gene051960:CDS 45.0%
GCATAGAACTAGCATGTCAG+AGG - chr2.2:3350951-3350970 None:intergenic 45.0%
GCCGTAAATACCACCACTTT+GGG - chr2.2:3346429-3346448 None:intergenic 45.0%
GCGTACGACAACACTTGATT+GGG - chr2.2:3347196-3347215 None:intergenic 45.0%
GCTGTCCAATAAATAGGAGC+GGG - chr2.2:3351345-3351364 None:intergenic 45.0%
GGATACAACACCTCTTTGTG+TGG + chr2.2:3351220-3351239 MS.gene051960:CDS 45.0%
GGGAAGACCACTTTAGCAAT+AGG + chr2.2:3349475-3349494 MS.gene051960:CDS 45.0%
GGGGTATACCTAACATCAGA+TGG - chr2.2:3348526-3348545 None:intergenic 45.0%
GTCAGTGATTGTACGTGATG+AGG + chr2.2:3347453-3347472 MS.gene051960:CDS 45.0%
GTGATTGTACGTGATGAGGA+GGG + chr2.2:3347457-3347476 MS.gene051960:CDS 45.0%
GTTAATGCAAGCCTCTTCTC+TGG - chr2.2:3347701-3347720 None:intergenic 45.0%
GTTGCTCTCCTCATTAAGCT+CGG - chr2.2:3347088-3347107 None:intergenic 45.0%
TAGACTGGATGCTCCTCATA+TGG - chr2.2:3350013-3350032 None:intergenic 45.0%
TAGAGAGGCAATGCTTGAGA+AGG + chr2.2:3347991-3348010 MS.gene051960:CDS 45.0%
TATGGCAAACGGCTAGTATC+CGG - chr2.2:3347056-3347075 None:intergenic 45.0%
TCAAGATCTGGGTCTTGACA+GGG + chr2.2:3348204-3348223 MS.gene051960:CDS 45.0%
TCAGACGAAATGCTTGGTCA+TGG - chr2.2:3351098-3351117 None:intergenic 45.0%
TCTTGTAACACCAGTGTCCA+TGG - chr2.2:3350501-3350520 None:intergenic 45.0%
TGATGTGTGTGGATGTGTGT+GGG + chr2.2:3349254-3349273 MS.gene051960:intron 45.0%
TGCAGCAAGTTCAACTTCAC+TGG - chr2.2:3346785-3346804 None:intergenic 45.0%
TGCCATTAATGGCACCAAAG+TGG + chr2.2:3349333-3349352 MS.gene051960:intron 45.0%
TGGAAGACAAGCTGCAGAAA+GGG + chr2.2:3348062-3348081 MS.gene051960:CDS 45.0%
TTAACGCAAAAGCGGCATGT+GGG - chr2.2:3348624-3348643 None:intergenic 45.0%
TTCACTGGAACGTACACCAT+AGG - chr2.2:3346770-3346789 None:intergenic 45.0%
TTGATGTGTGTGGATGTGTG+TGG + chr2.2:3349253-3349272 MS.gene051960:intron 45.0%
TTGCCCACATATCGTTCCAA+AGG + chr2.2:3351403-3351422 MS.gene051960:CDS 45.0%
TTGCTCCCGCTCCTATTTAT+TGG + chr2.2:3351337-3351356 MS.gene051960:CDS 45.0%
TTGCTCTCCTCATTAAGCTC+GGG - chr2.2:3347087-3347106 None:intergenic 45.0%
! AAAAGAAGGGTAAAGCGCCA+TGG + chr2.2:3346866-3346885 MS.gene051960:CDS 45.0%
! AAAGAAGGGTAAAGCGCCAT+GGG + chr2.2:3346867-3346886 MS.gene051960:CDS 45.0%
! AAAGCGCCATGGGAAAATGT+TGG + chr2.2:3346877-3346896 MS.gene051960:CDS 45.0%
! CCTTTTGCTTGGGAGATACA+CGG - chr2.2:3348741-3348760 None:intergenic 45.0%
! CGCTTTACCCTTCTTTTGCA+TGG - chr2.2:3346863-3346882 None:intergenic 45.0%
! GCCATCTGAAGTTTGCTTAC+AGG + chr2.2:3350866-3350885 MS.gene051960:CDS 45.0%
! GCTCTTCCAACATTTTCCCA+TGG - chr2.2:3346886-3346905 None:intergenic 45.0%
! GGTGATGGTGCAAATGATGT+TGG + chr2.2:3349496-3349515 MS.gene051960:CDS 45.0%
! TAGTATGGCAAAGGAAGCAC+TGG + chr2.2:3345787-3345806 MS.gene051960:CDS 45.0%
! TCAAGCATTGCCTCTCTATC+AGG - chr2.2:3347989-3348008 None:intergenic 45.0%
! TCAAGCTGGTCTCAAGATCT+GGG + chr2.2:3348193-3348212 MS.gene051960:CDS 45.0%
! TCGTTGCCTGTCATTTCACT+TGG + chr2.2:3350825-3350844 MS.gene051960:CDS 45.0%
! TTGAGGCTGGTTGCAATACA+CGG - chr2.2:3345558-3345577 None:intergenic 45.0%
! TTTTCTGCAAAGGAGCTGAC+AGG + chr2.2:3347491-3347510 MS.gene051960:CDS 45.0%
!! ACATTGGTGTTGGAATCAGC+GGG + chr2.2:3349536-3349555 MS.gene051960:CDS 45.0%
!! ATCATGCTCAGTGGACTGAA+AGG - chr2.2:3345740-3345759 None:intergenic 45.0%
!! ATGCAATGGTATGGTGCCAT+TGG + chr2.2:3349310-3349329 MS.gene051960:intron 45.0%
!! CTCCACTTTGGTGCCATTAA+TGG - chr2.2:3349338-3349357 None:intergenic 45.0%
!! GACATTGGTGTTGGAATCAG+CGG + chr2.2:3349535-3349554 MS.gene051960:CDS 45.0%
!! GATTGGTTCTATGGCACCAA+TGG - chr2.2:3349226-3349245 None:intergenic 45.0%
!! TATGGGGTGGTCATTTTCAC+TGG + chr2.2:3346244-3346263 MS.gene051960:CDS 45.0%
!! TCCAGTTTTATCGGAGAGGA+TGG - chr2.2:3346695-3346714 None:intergenic 45.0%
!! TTGTGAAGGTATTACAGGCC+AGG + chr2.2:3346572-3346591 MS.gene051960:CDS 45.0%
!! TTTTGATTGCCTGAGGGTGA+GGG - chr2.2:3348546-3348565 None:intergenic 45.0%
!!! CTCCTTTGGCTTTTGTTGTG+GGG + chr2.2:3345762-3345781 MS.gene051960:CDS 45.0%
!!! GCTCCTTTGGCTTTTGTTGT+GGG + chr2.2:3345761-3345780 MS.gene051960:CDS 45.0%
!!! TGCTCCTTTGGCTTTTGTTG+TGG + chr2.2:3345760-3345779 MS.gene051960:CDS 45.0%
!!! TTTATTTTTTATTTTTTCTA+TGG + chr2.2:3348354-3348373 MS.gene051960:intron 5.0%
ACAGTGCATGGCAGAACTCT+TGG - chr2.2:3349131-3349150 None:intergenic 50.0%
ACTCTCTGCTTCCAGAGAAG+AGG + chr2.2:3347687-3347706 MS.gene051960:intron 50.0%
AGCCCCACAACAAAAGCCAA+AGG - chr2.2:3345767-3345786 None:intergenic 50.0%
AGGCCTGCCATAAAGGGATT+TGG + chr2.2:3346958-3346977 MS.gene051960:CDS 50.0%
AGTATGAGACCCCAAAGTGG+TGG + chr2.2:3346416-3346435 MS.gene051960:CDS 50.0%
ATTGTGCGCTACTGCACTCT+TGG + chr2.2:3349066-3349085 MS.gene051960:intron 50.0%
CAAGAGTGGAAGCAACGATC+AGG + chr2.2:3351553-3351572 MS.gene051960:CDS 50.0%
CAAGATCTGGGTCTTGACAG+GGG + chr2.2:3348205-3348224 MS.gene051960:CDS 50.0%
CAAGTGGTTGAAAGGTGAGG+TGG + chr2.2:3347237-3347256 MS.gene051960:intron 50.0%
CACAGAGTATGTCTATGGGG+TGG + chr2.2:3346231-3346250 MS.gene051960:CDS 50.0%
CACCAATGGCACCATTGCTA+TGG - chr2.2:3349212-3349231 None:intergenic 50.0%
CCGTGTATCTCCCAAGCAAA+AGG + chr2.2:3348738-3348757 MS.gene051960:CDS 50.0%
CGAGGATGGGATATGCTATG+TGG + chr2.2:3345985-3346004 MS.gene051960:CDS 50.0%
CGCGTACGACAACACTTGAT+TGG - chr2.2:3347197-3347216 None:intergenic 50.0%
CTCAAGATCTGGGTCTTGAC+AGG + chr2.2:3348203-3348222 MS.gene051960:CDS 50.0%
CTCCTCATTAAGCTCGGGAA+TGG - chr2.2:3347082-3347101 None:intergenic 50.0%
CTGGAAGCAGAGAGTTACTG+TGG - chr2.2:3347682-3347701 None:intergenic 50.0%
GACAAGGAAGAAGATGGCGA+GGG - chr2.2:3351064-3351083 None:intergenic 50.0%
GATGGCTACTGATCTTGAGG+AGG + chr2.2:3346813-3346832 MS.gene051960:CDS 50.0%
GATGTGTGTGGATGTGTGTG+GGG + chr2.2:3349255-3349274 MS.gene051960:intron 50.0%
GCAGATGGCTACTGATCTTG+AGG + chr2.2:3346810-3346829 MS.gene051960:CDS 50.0%
GGAAGACAAGCTGCAGAAAG+GGG + chr2.2:3348063-3348082 MS.gene051960:CDS 50.0%
GGACAAGTGGTTGAAAGGTG+AGG + chr2.2:3347234-3347253 MS.gene051960:intron 50.0%
GGATCAAAGGCCTGCCATAA+AGG + chr2.2:3346951-3346970 MS.gene051960:CDS 50.0%
GGCCATTCAGACGAAATGCT+TGG - chr2.2:3351104-3351123 None:intergenic 50.0%
GGCCGTAAATACCACCACTT+TGG - chr2.2:3346430-3346449 None:intergenic 50.0%
GGCTCATTGTCAAGGCAATC+TGG - chr2.2:3351191-3351210 None:intergenic 50.0%
GGGAATGGCAGTATGGCAAA+CGG - chr2.2:3347067-3347086 None:intergenic 50.0%
GGGTTTGAGAACATTAGCCC+TGG + chr2.2:3347889-3347908 MS.gene051960:CDS 50.0%
GGTCCTTGCTGATATAGTGC+AGG - chr2.2:3350979-3350998 None:intergenic 50.0%
GGTCTTGACAGGGGATAAGA+TGG + chr2.2:3348214-3348233 MS.gene051960:CDS 50.0%
GTGGAAGACAAGCTGCAGAA+AGG + chr2.2:3348061-3348080 MS.gene051960:CDS 50.0%
GTGTGTGATGTGTGTGTGTG+TGG + chr2.2:3349282-3349301 MS.gene051960:intron 50.0%
TAAGCTCGGGAATGGCAGTA+TGG - chr2.2:3347074-3347093 None:intergenic 50.0%
TACACGGTTCTCGAGTAACC+GGG - chr2.2:3345542-3345561 None:intergenic 50.0%
TCCTCCGAGATTCAAAGCTC+AGG + chr2.2:3346206-3346225 MS.gene051960:CDS 50.0%
TGACAAGGAAGAAGATGGCG+AGG - chr2.2:3351065-3351084 None:intergenic 50.0%
TGCCATTCCCGAGCTTAATG+AGG + chr2.2:3347077-3347096 MS.gene051960:CDS 50.0%
TGTGATGTGTGTGTGTGTGG+TGG + chr2.2:3349285-3349304 MS.gene051960:intron 50.0%
TGTGGGGCTTAGTATGGCAA+AGG + chr2.2:3345778-3345797 MS.gene051960:CDS 50.0%
TTCTGGTAGTCCATGGACAC+TGG + chr2.2:3350488-3350507 MS.gene051960:CDS 50.0%
TTTGATTGCCTGAGGGTGAG+GGG - chr2.2:3348545-3348564 None:intergenic 50.0%
! AAGTGGATGAGGCACCTCAT+CGG - chr2.2:3345513-3345532 None:intergenic 50.0%
! ACTTGCTGCAGCAAAGCAGA+TGG + chr2.2:3346795-3346814 MS.gene051960:CDS 50.0%
! CTCAAGCTGGTCTCAAGATC+TGG + chr2.2:3348192-3348211 MS.gene051960:CDS 50.0%
! GCCGGCTCATGAATGGTAAT+TGG + chr2.2:3346992-3347011 MS.gene051960:CDS 50.0%
! GTGGTGGAGATGCAATGGTA+TGG + chr2.2:3349301-3349320 MS.gene051960:intron 50.0%
! TCTCGGAGGAGTATATGACC+AGG - chr2.2:3346196-3346215 None:intergenic 50.0%
! TCTGCATGACTTTGCTGTCG+TGG - chr2.2:3346270-3346289 None:intergenic 50.0%
! TGTGCTGCTCATCCTGTTCA+AGG + chr2.2:3350591-3350610 MS.gene051960:intron 50.0%
! TGTGTGTGGTGGAGATGCAA+TGG + chr2.2:3349296-3349315 MS.gene051960:intron 50.0%
!! AACGGCCAGGATTGGTTCTA+TGG - chr2.2:3349235-3349254 None:intergenic 50.0%
!! AAGCACTGGAGGATTCACGT+AGG + chr2.2:3345801-3345820 MS.gene051960:CDS 50.0%
!! CATTGGTGTTGGAATCAGCG+GGG + chr2.2:3349537-3349556 MS.gene051960:CDS 50.0%
!! CTTTTGATTGCCTGAGGGTG+AGG - chr2.2:3348547-3348566 None:intergenic 50.0%
!! GGTGCCATTAATGGCACCAA+TGG - chr2.2:3349350-3349331 None:intergenic 50.0%
!! GGTGCCATTGGTGCCATTAA+TGG + chr2.2:3349322-3349341 MS.gene051960:intron 50.0%
!! TATGGCAAAGGAAGCACTGG+AGG + chr2.2:3345790-3345809 MS.gene051960:CDS 50.0%
!! TCCTGAGCTTTGAATCTCGG+AGG - chr2.2:3346210-3346229 None:intergenic 50.0%
!! TGCCATAGCAATGGTGCCAT+TGG + chr2.2:3349207-3349226 MS.gene051960:intron 50.0%
!! TGGTGCCATAGAACCAATCC+TGG + chr2.2:3349227-3349246 MS.gene051960:intron 50.0%
!!! GCGTTTTTGGTCTCAAGTCG+TGG + chr2.2:3345879-3345898 MS.gene051960:CDS 50.0%
AACACATGTGGACGAGGGAG+CGG + chr2.2:3351493-3351512 MS.gene051960:CDS 55.0%
AAGGAAGAAGATGGCGAGGG+AGG - chr2.2:3351061-3351080 None:intergenic 55.0%
ACAGGATGAGCAGCACAAGC+AGG - chr2.2:3350588-3350607 None:intergenic 55.0%
ACGAGAGGCAAGCAGCCAAA+AGG - chr2.2:3345703-3345722 None:intergenic 55.0%
ACTGCAGACATGGCTGCTGT+TGG + chr2.2:3351126-3351145 MS.gene051960:CDS 55.0%
AGCAACGATCAGGCAGCTGA+AGG + chr2.2:3351563-3351582 MS.gene051960:CDS 55.0%
AGCTGTTGGGCCTGATAGAG+AGG + chr2.2:3347976-3347995 MS.gene051960:CDS 55.0%
ATCCACACACATCAACGGCC+AGG - chr2.2:3349248-3349267 None:intergenic 55.0%
ATCCTGGCCGTTGATGTGTG+TGG + chr2.2:3349243-3349262 MS.gene051960:intron 55.0%
ATCTCCCAAGCAAAAGGCCC+TGG + chr2.2:3348744-3348763 MS.gene051960:CDS 55.0%
CAACGATCAGGCAGCTGAAG+GGG + chr2.2:3351565-3351584 MS.gene051960:CDS 55.0%
CACACATCAACGGCCAGGAT+TGG - chr2.2:3349243-3349262 None:intergenic 55.0%
CAGGATGAGCAGCACAAGCA+GGG - chr2.2:3350587-3350606 None:intergenic 55.0%
CCTCATCCACTTCAAGGTCC+CGG + chr2.2:3345521-3345540 MS.gene051960:CDS 55.0%
CTATGCTGCCCCACACAAAG+AGG - chr2.2:3351233-3351252 None:intergenic 55.0%
GAATGGCCAGACTGCAGACA+TGG + chr2.2:3351116-3351135 MS.gene051960:CDS 55.0%
GACAAGCTGCAGAAAGGGGT+AGG + chr2.2:3348067-3348086 MS.gene051960:intron 55.0%
GAGTAACCGGGACCTTGAAG+TGG - chr2.2:3345530-3345549 None:intergenic 55.0%
GCAACGATCAGGCAGCTGAA+GGG + chr2.2:3351564-3351583 MS.gene051960:CDS 55.0%
GGAGGATTAGGGCAAAGCTC+CGG + chr2.2:3345444-3345463 MS.gene051960:CDS 55.0%
GGCACCTCATCGGCAGTATT+CGG - chr2.2:3345503-3345522 None:intergenic 55.0%
GTTGACAGCCCAGATGATGC+AGG - chr2.2:3351166-3351185 None:intergenic 55.0%
GTTGGAATCAGCGGGGTTGA+AGG + chr2.2:3349544-3349563 MS.gene051960:CDS 55.0%
TAGGTATACCCCTCACCCTC+AGG + chr2.2:3348534-3348553 MS.gene051960:intron 55.0%
TCTTGTTGGGGCTACTGCTG+TGG + chr2.2:3348042-3348061 MS.gene051960:CDS 55.0%
TGCGGGCTTCTCTGGTCAAT+CGG + chr2.2:3350758-3350777 MS.gene051960:CDS 55.0%
TTGACCAGAGAAGCCCGCAA+AGG - chr2.2:3350757-3350776 None:intergenic 55.0%
TTTGACGTCCGTGCTTCAGC+AGG - chr2.2:3346643-3346662 None:intergenic 55.0%
! CCTACCAGGGCCTTTTGCTT+GGG - chr2.2:3348751-3348770 None:intergenic 55.0%
! GAGGTGCCTCATCCACTTCA+AGG + chr2.2:3345515-3345534 MS.gene051960:CDS 55.0%
! GATGACAGCCGGCTCATGAA+TGG + chr2.2:3346985-3347004 MS.gene051960:CDS 55.0%
! GGAGCGGTCTAAAGCAAGAC+AGG + chr2.2:3351509-3351528 MS.gene051960:CDS 55.0%
! TCCTACCAGGGCCTTTTGCT+TGG - chr2.2:3348752-3348771 None:intergenic 55.0%
!!! TCGGTTTTTGGAGCGGCTTC+TGG + chr2.2:3350471-3350490 MS.gene051960:CDS 55.0%
CAGCAGCCATGTCTGCAGTC+TGG - chr2.2:3351125-3351144 None:intergenic 60.0%
CCCAAGCAAAAGGCCCTGGT+AGG + chr2.2:3348748-3348767 MS.gene051960:intron 60.0%
CCGGGACCTTGAAGTGGATG+AGG - chr2.2:3345524-3345543 None:intergenic 60.0%
GAGCGGCTTCTGGTAGTCCA+TGG + chr2.2:3350481-3350500 MS.gene051960:CDS 60.0%
GCCACGGGTGAGGAGGATTA+GGG + chr2.2:3345433-3345452 MS.gene051960:CDS 60.0%
GGATTAGGGCAAAGCTCCGG+TGG + chr2.2:3345447-3345466 MS.gene051960:CDS 60.0%
TCGGCCGAATACTGCCGATG+AGG + chr2.2:3345496-3345515 MS.gene051960:CDS 60.0%
TGCCACGGGTGAGGAGGATT+AGG + chr2.2:3345432-3345451 MS.gene051960:CDS 60.0%
TGTGGGGCAGCATAGCCAGT+TGG + chr2.2:3351238-3351257 MS.gene051960:CDS 60.0%
! CAGCGGGGTTGAAGGTATGC+AGG + chr2.2:3349552-3349571 MS.gene051960:CDS 60.0%
CCGGGACTCCTGCTGAAGCA+CGG + chr2.2:3346632-3346651 MS.gene051960:CDS 65.0%
CCGTGCTTCAGCAGGAGTCC+CGG - chr2.2:3346635-3346654 None:intergenic 65.0%
GAGGCCTTTGCGGGCTTCTC+TGG + chr2.2:3350750-3350769 MS.gene051960:CDS 65.0%
GCCCTAATCCTCCTCACCCG+TGG - chr2.2:3345437-3345456 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 3345431 3351635 3345431 ID=MS.gene051960
chr2.2 mRNA 3345431 3351635 3345431 ID=MS.gene051960.t1;Parent=MS.gene051960
chr2.2 exon 3345431 3347250 3345431 ID=MS.gene051960.t1.exon1;Parent=MS.gene051960.t1
chr2.2 CDS 3345431 3347250 3345431 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3347402 3347512 3347402 ID=MS.gene051960.t1.exon2;Parent=MS.gene051960.t1
chr2.2 CDS 3347402 3347512 3347402 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3347808 3348084 3347808 ID=MS.gene051960.t1.exon3;Parent=MS.gene051960.t1
chr2.2 CDS 3347808 3348084 3347808 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3348167 3348255 3348167 ID=MS.gene051960.t1.exon4;Parent=MS.gene051960.t1
chr2.2 CDS 3348167 3348255 3348167 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3348382 3348469 3348382 ID=MS.gene051960.t1.exon5;Parent=MS.gene051960.t1
chr2.2 CDS 3348382 3348469 3348382 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3348556 3348765 3348556 ID=MS.gene051960.t1.exon6;Parent=MS.gene051960.t1
chr2.2 CDS 3348556 3348765 3348556 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3349448 3349573 3349448 ID=MS.gene051960.t1.exon7;Parent=MS.gene051960.t1
chr2.2 CDS 3349448 3349573 3349448 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3350436 3350534 3350436 ID=MS.gene051960.t1.exon8;Parent=MS.gene051960.t1
chr2.2 CDS 3350436 3350534 3350436 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3350696 3350887 3350696 ID=MS.gene051960.t1.exon9;Parent=MS.gene051960.t1
chr2.2 CDS 3350696 3350887 3350696 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
chr2.2 exon 3350973 3351635 3350973 ID=MS.gene051960.t1.exon10;Parent=MS.gene051960.t1
chr2.2 CDS 3350973 3351635 3350973 ID=cds.MS.gene051960.t1;Parent=MS.gene051960.t1
Gene Sequence

>MS.gene051960

ATGCCACGGGTGAGGAGGATTAGGGCAAAGCTCCGGTGGAGCAATCTTTACACGTTTGGTTGTCTTCGGCCGAATACTGCCGATGAGGTGCCTCATCCACTTCAAGGTCCCGGTTACTCGAGAACCGTGTATTGCAACCAGCCTCAAATCCATGAAAAGAAATCTTTATTTTACTGCAAGAATAATATATCAACGACCAAATACAATGCTATTATGTTTTTTCCTAAGGCGCTGTTTGAACAGTTTCGAAGGGTTGCTAATATATACTTCCTTTTGGCTGCTTGCCTCTCGTTATCACCAATTTCACCTTTCAGTCCACTGAGCATGATTGCTCCTTTGGCTTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCACTGGAGGATTCACGTAGGTTCCTTCAAGATGTTAAGGTTAATCGCCGGAAAGCTAGTTTCCATAAAGGCAATGGCGTTTTTGGTCTCAAGTCGTGGCAGAAAATTATGGTTGGGGATATAGTGAAAGTAGAAAAGGATCAATTTTTTCCAGCTGACTTGCTTCTATTGTCTTCAAGTTACGAGGATGGGATATGCTATGTGGAAACCATGAATTTAGATGGAGAGACCAACTTGAAGGTGAAAAGATCATTGGAGGCTACCTTTTCCCTTGATAATGATGGAGCTTTTAAGGATTTCTCTGGAACAATACGTTGCGAAGACCCAAATCCCAATCTTTACACTTTTGTTGGGAACTTTGAGTACGAACGTCAGGTTTATCCTCTTGATCCTGGTCATATACTCCTCCGAGATTCAAAGCTCAGGAACACAGAGTATGTCTATGGGGTGGTCATTTTCACTGGCCACGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGAAGCAGAATAGAGAAAAAGATGGATTATATCATATACACTCTTTTCTCTGTCCTTATAGCGATATCATTTATTAGTTCAGTAGGATTTGTTGTTAAGACTAAGTATGAGACCCCAAAGTGGTGGTATTTACGGCCCGACCAGATTGAATATCAGTATGATCCTAAGAAACTTGGATTTGCTGGGATGAGCCATCTGATCACTGCTCTTATTCTTTATGGATATTTGATACCCATCTCTCTCTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCCAGGTTCATTAACCAAGACCTTCACATGTATGATGAAGAAACCGGGACTCCTGCTGAAGCACGGACGTCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCCGATAAAACTGGAACTTTAACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGAATTTCCTATGGTGTACGTTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTACTGATCTTGAGGAGGAAGATTTTGATCTCTCTAATTTCCCCATGCAAAAGAAGGGTAAAGCGCCATGGGAAAATGTTGGAAGAGCTGAAGAAATTGAACTTGAGACAGTTGTTACTTCTAAGGATGGTGAGGATCAAAGGCCTGCCATAAAGGGATTTGGTTTTGATGACAGCCGGCTCATGAATGGTAATTGGTCGAAAGATCCCAATGCTGAAGTCATTTTGTTGTTTTTCCGGATACTAGCCGTTTGCCATACTGCCATTCCCGAGCTTAATGAGGAGAGCAACAGCTGTACTTACGAAGCTGAATCACCTGATGAAGGGGCTTTTCTTGTAGCTGCTAGAGAATTTGGTTTTGAATTTTGTAGAAGAACCCAATCAAGTGTTGTCGTACGCGAAAGAATTTCTGCTTCTGGACAAGTGGTTGAAAGGTGAGGTGGACATTTATGAAGTCTATTGTGCATTTCCGGTTTTTTCTTCGGGAATACTTGCTAGGGCTTTTACTTTTGAATCACCATGTCATATTTCTTGGCCGTAATATCCGATGTTTGTTTATTTTTGTGTTTCGGTTGAATTGTACAGAGAGTATAAAATACTGAATCTGCTGGAATTTACTAGCAAAAGAAAGCGTATGTCAGTGATTGTACGTGATGAGGAGGGAAACATTATTCTTTTCTGCAAAGGAGCTGACAGGTTAGCCTAGTAATGTGACTTCTGTCTATTCTGTTTATTGAACATATGAGGTTAATGATCAATTAAGACCTTCTATCGGTTTCAACATCAAAATTAAAATCCTCTTCAAGCTTGTGGAGTTTGTATTCGACTTACTGCTAGTAGTAGCACAGTTTAGTCTATATAACCACAGTAACTCTCTGCTTCCAGAGAAGAGGCTTGCATTAACACACACGCACACACACACAAGCTGTCATAGATGGACTTTTATCTTTCCTCTCTAAACTTTGACATCCATTATTTTCTTGTTGTACAGTATCATATTTGATAGACTATCTAAGAATGGAAAGAAGTATTTGGAGACTACTTCTAGGCATTTGAATGAATATGGAGAGGTGGGTTTGAGAACATTAGCCCTGGCTTACAGAAAGCTTGATGAACAAGAGTACTCTGATTGGAACAATGAGTTTCAGAAAGCTAAGACAGCTGTTGGGCCTGATAGAGAGGCAATGCTTGAGAAGGTATCAGATAGTATGGAAAGAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAGCTGCAGAAAGGGGTAGGCTTGATCATTACATGTGGTCAATATATATTGCTGCTTTCCTATAATTTTTTCACGTACAAATTTTTATTCTTCTCAGGTGCCTCAATGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTCTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGGTATGCGTACTGCAAATTATTTAACCCCACAACACTATCTGCATTTCAATTTTAAGTTTGAAGTTACTCAAGACAGCCTCTTCAAATGAGTTTGGTGATTTATTTTTTATTTTTTCTATGGTGCAGATTTGCATGTAGTTTACTTCGACAGGGCATGAAGCAAATCTGTATCTCTACTACAAATTCAGAATCAGTGATCAATGATGGGAAAGAGGTATTCCTTTCACTTAGATTGAGCAGAAAAAATTTACTATTTCGCCATGGATTCCATCTGATGTTAGGTATACCCCTCACCCTCAGGCAATCAAAAGCAACATCTTGACTCAAATCACCAATGCCTCACAATTGATGAATCTGGAGAAGGACCCACATGCCGCTTTTGCGTTAATTATTGACGGAAAAACTCTAACATATGCTTTAGAAGATGATATCAAACACCAATTTTTGGGATTAGCTGTTAATTGTGCATCTGTCATTTGCTGCCGTGTATCTCCCAAGCAAAAGGCCCTGGTAGGATCTTTTTTCTTTTCCCTTTGTATCTTTCTGGTTTCTATTTGATATTCTTTTACTGCATTTCATTAGTTGATCACTATAAATCGTGCTACTTGCCTAAGCTATCAAACTCGAGAGTTTTGGTAAACTTGCGTAGTCTCGCAAACTAGACTTGTAAAATCGTAATAGTTAACTCAATATTGAAAATACCTACATATGAGATATATAGATGTTGTAATTATCATAAAAATAATAAAATTCAACATTTCAGCTTGAGAGTTTAACGACCATGCTACTTACACAAATATTGGAGTAACAATTGTGCGCTACTGCACTCTTGGCTCTATGTTGATGTTAGATGGGAAAAATTAGGTGTGGATCCAAGAGTTCTGCCATGCACTGTTATTGAAATACTTCTGTAGGTAGATTTTATATAGTATAAGTAGGAAAATACTTCAGTGCCATAGCAATGGTGCCATTGGTGCCATAGAACCAATCCTGGCCGTTGATGTGTGTGGATGTGTGTGGGGATGTGTGTGTGATGTGTGTGTGTGTGGTGGAGATGCAATGGTATGGTGCCATTGGTGCCATTAATGGCACCAAAGTGGAGTCCGTATAAGTACTATCACTGTACCAACACTAAAAGTATGAAGTCGGTACTGTTTGATTGCATCTTCATTCCTCAATCTTTTGGCATCAGGTAACAAGGTTAGTGAAAGAAGGAACTGGGAAGACCACTTTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGTCAGTTCAAGCTCTTTAAATATAATTATGCAACACAAAATTATAACTGCAAATGGTGGATTACTGGATTTTAACATTTATGTTTTTTAGTTGCAACAGCATATATTTCATAGTTATAAAACATACCAAGTTTTGATTTCATAAACCTTAAGCATTTTAAAAATGAATGGGGATGGTGACAGAGAAATCTATCATGTTTACATGTGTGGACGCTGAAACAGATTTCTTGTCAAGCCTTTTTGGTGATGTTCTTATTAATCAGTATTGACAATGCGATAGAGAAGTGAATCTCTTTTTGCTTTGTTAATCATTCATTTTGATTTCATATAGCTTAATCTCTATAAAATTAGAAAAGCTGCAAATCTGCAAAGATGAAGCTTCCCTTCTTTGATTGTTCTACGTTCTAATATTTCTTAAAATATTTTACTATGGAGAACCATATGAGGAGCATCCAGTCTAAATTTAGTATTTACTTATTTCTGATGAGAAGCTAAAATTTCCAATTTAATACAAACAATACTATTGTGCAACCTATCTGCTGTCCATGATATGAACGTTTTGTTGAGGCACCATTACATGAAGTCGTGAGCGTTAAAAGAACATGCTGATCAATGTTTTAAATTTAGGAAATTTCTTTGCTTCTGTTCATGTGAAATAGTGTAAATTGATTGACTTGTTGATTGGAGTTCATGTTCACTTGATCAATAATGAAAAACTATTTAGTTAAAATCTATGTTGGCCTGTAAACACTTCTTAATTGTTACTATCATCTCTAAAGTCAAGAAAACACGTGTTTTTCCTATTTGGAAAGCATGTAACATGTATGGAAGTTATATAACTCAATCTGGCAAATTCTTTTCAGGCGGTGATGGCTAGTGACTTTTCCATTGCTCAATTTCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGGTAATTGGTATATGCATCTTGATTGTTATTCTCAGATTTTGAATGTCTTCCCTGCTTGTGCTGCTCATCCTGTTCAAGGACAGTAATGCATGTAACATTTTTTTCTTTTTCTATCTGTTATCCAATATTTCCCATCTAAACTGATTTTTTATGCATTCCAGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACAATATTCTATTTTGAGGCCTTTGCGGGCTTCTCTGGTCAATCGGTTTATAATGATTGGTACATGATATTGTTTAACGTCATTCTTACATCGTTGCCTGTCATTTCACTTGGAGTTTTTGAACAAGATGTGCCATCTGAAGTTTGCTTACAGGTTTGTTTTCTTGAAATGCCTTGTGGGTTTCATATTTTCATCCATGTTTGGATAACTCAACCTCTGACATGCTAGTTCTATGCAGTTTCCTGCACTATATCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGGAATGGTCTGTACTCCTCCCTCGCCATCTTCTTCCTTGTCATCATCATCTTCCATGACCAAGCATTTCGTCTGAATGGCCAGACTGCAGACATGGCTGCTGTTGGTACCACAATGTTCACCTGCATCATCTGGGCTGTCAACTGCCAGATTGCCTTGACAATGAGCCATTTTACATGGATACAACACCTCTTTGTGTGGGGCAGCATAGCCAGTTGGTACCTGTTTCTCTTATTATATGGCATGCTTTCTCCACATTATTCCATGACTGCGTACCAAATATTGGTTGAAGTGCTTGCTCCCGCTCCTATTTATTGGACAGCAACCATTTTAGTAACTGTTACATGCAATCTTCCTTATCTTGCCCACATATCGTTCCAAAGGTGTTTTAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACGTTGAAGATCAACACATGTGGACGAGGGAGCGGTCTAAAGCAAGACAGGAAACAAAGATTGGATTCACAGCAAGAGTGGAAGCAACGATCAGGCAGCTGAAGGGGAAGCTGCAGAAGAAGCAAACATCAGGAGGGGTTTTTTCCCCATCATGA

Protein sequence

>MS.gene051960.t1

MPRVRRIRAKLRWSNLYTFGCLRPNTADEVPHPLQGPGYSRTVYCNQPQIHEKKSLFYCKNNISTTKYNAIMFFPKALFEQFRRVANIYFLLAACLSLSPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKASFHKGNGVFGLKSWQKIMVGDIVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATFSLDNDGAFKDFSGTIRCEDPNPNLYTFVGNFEYERQVYPLDPGHILLRDSKLRNTEYVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYTLFSVLIAISFISSVGFVVKTKYETPKWWYLRPDQIEYQYDPKKLGFAGMSHLITALILYGYLIPISLYVSIEVVKVLQARFINQDLHMYDEETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGISYGVRSSEVELAAAKQMATDLEEEDFDLSNFPMQKKGKAPWENVGRAEEIELETVVTSKDGEDQRPAIKGFGFDDSRLMNGNWSKDPNAEVILLFFRILAVCHTAIPELNEESNSCTYEAESPDEGAFLVAAREFGFEFCRRTQSSVVVRERISASGQVVEREYKILNLLEFTSKRKRMSVIVRDEEGNIILFCKGADSIIFDRLSKNGKKYLETTSRHLNEYGEVGLRTLALAYRKLDEQEYSDWNNEFQKAKTAVGPDREAMLEKVSDSMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICISTTNSESVINDGKEAIKSNILTQITNASQLMNLEKDPHAAFALIIDGKTLTYALEDDIKHQFLGLAVNCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYNDWYMILFNVILTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLAIFFLVIIIFHDQAFRLNGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIASWYLFLLLYGMLSPHYSMTAYQILVEVLAPAPIYWTATILVTVTCNLPYLAHISFQRCFNPMDHHIIQEIKYYKKDVEDQHMWTRERSKARQETKIGFTARVEATIRQLKGKLQKKQTSGGVFSPS