Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72632.t1 | XP_003608726.2 | 93.5 | 758 | 49 | 0 | 1 | 758 | 1 | 758 | 0.00E+00 | 1431 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72632.t1 | G7JIY0 | 93.5 | 758 | 49 | 0 | 1 | 758 | 1 | 758 | 0.0e+00 | 1431.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055251 | MS.gene72632 | 0.800657 | 1.30E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72632.t1 | MTR_4g101070 | 94.063 | 758 | 45 | 0 | 1 | 758 | 1 | 758 | 0.0 | 1458 |
| MS.gene72632.t1 | MTR_4g101050 | 82.740 | 759 | 123 | 4 | 3 | 758 | 1 | 754 | 0.0 | 1261 |
| MS.gene72632.t1 | MTR_4g101070 | 94.416 | 591 | 33 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72632.t1 | AT4G17250 | 47.411 | 734 | 370 | 9 | 8 | 733 | 3 | 728 | 0.0 | 669 |
| MS.gene72632.t1 | AT5G47580 | 48.834 | 729 | 363 | 5 | 8 | 731 | 6 | 729 | 0.0 | 667 |
| MS.gene72632.t1 | AT4G17250 | 49.682 | 628 | 305 | 7 | 8 | 630 | 3 | 624 | 0.0 | 610 |
| MS.gene72632.t1 | AT4G17250 | 45.212 | 637 | 333 | 9 | 105 | 733 | 1 | 629 | 0.0 | 535 |
Find 126 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACGCTATATCTGTTAA+AGG | 0.163957 | 8.3:-20079285 | MS.gene72632:CDS |
| TTGGATGCCAATACTTTAAT+AGG | 0.211350 | 8.3:+20079444 | None:intergenic |
| TCAATGTTGCATGGATTTAA+AGG | 0.244994 | 8.3:-20079885 | MS.gene72632:CDS |
| AACAATTCAATAACAAGTTT+TGG | 0.257554 | 8.3:+20079921 | None:intergenic |
| ATATTATCTTGTGTGTATTA+AGG | 0.259802 | 8.3:-20079484 | MS.gene72632:CDS |
| AATGGTACAGATTCGGGTTT+AGG | 0.260859 | 8.3:-20080074 | MS.gene72632:CDS |
| TCCATGTAATGTTTCATCTT+TGG | 0.271186 | 8.3:+20080752 | None:intergenic |
| GAGATGAATTGTTGAAATTC+TGG | 0.271539 | 8.3:-20080643 | MS.gene72632:CDS |
| AGGCAAATGTCCCTCAATTT+AGG | 0.283800 | 8.3:+20079036 | None:intergenic |
| CTGGTGTTATTTATGAGTTT+TGG | 0.301370 | 8.3:-20080847 | MS.gene72632:CDS |
| TAATGTCTCAAGTGTCTCTT+TGG | 0.302092 | 8.3:+20079548 | None:intergenic |
| TCAGTTTCATGTACTGCTTC+TGG | 0.302903 | 8.3:-20080578 | MS.gene72632:CDS |
| AAATTCAATGGTACAGATTC+GGG | 0.312280 | 8.3:-20080080 | MS.gene72632:CDS |
| TGAAACCATGTTGAATGTTT+TGG | 0.313595 | 8.3:-20080924 | MS.gene72632:CDS |
| TTTGTGAGTATTTCAAGAAT+TGG | 0.319604 | 8.3:-20080109 | MS.gene72632:CDS |
| GTTATGATTGCTGATATATT+AGG | 0.327555 | 8.3:-20079327 | MS.gene72632:CDS |
| TTCGATCTTATTTGATGTCT+TGG | 0.342435 | 8.3:-20080511 | MS.gene72632:CDS |
| AAAATTCAATGGTACAGATT+CGG | 0.346213 | 8.3:-20080081 | MS.gene72632:CDS |
| ATTTGTATACAGTTTGTAAC+TGG | 0.348616 | 8.3:-20080866 | MS.gene72632:CDS |
| TTACCCTATGCGGTGGATCT+TGG | 0.348786 | 8.3:-20080135 | MS.gene72632:CDS |
| TTTGACGGAAACAGCGATAA+TGG | 0.361646 | 8.3:+20081072 | None:intergenic |
| TACCCTATGCGGTGGATCTT+GGG | 0.363258 | 8.3:-20080134 | MS.gene72632:CDS |
| CCGCGGCAACAATCCACTTT+AGG | 0.374074 | 8.3:+20079159 | None:intergenic |
| TGCTTTAATTTGCACTATCA+TGG | 0.383099 | 8.3:-20080984 | MS.gene72632:CDS |
| ACAGCCTCTCACGAGTATTA+TGG | 0.398293 | 8.3:+20079364 | None:intergenic |
| TTGCATGGATTTAAAGGAGT+TGG | 0.399932 | 8.3:-20079879 | MS.gene72632:CDS |
| GGATTGGTAACCGGTGGTTT+AGG | 0.400590 | 8.3:-20080256 | MS.gene72632:CDS |
| GCATCAGAACTCGCAAACTA+TGG | 0.407134 | 8.3:-20081135 | MS.gene72632:CDS |
| AAAGAGAGCCTTTCCTAAAG+TGG | 0.408572 | 8.3:-20079172 | MS.gene72632:CDS |
| TGGCATGGAGCTGATCTCTA+TGG | 0.410840 | 8.3:-20079621 | MS.gene72632:CDS |
| TTACCAATCCGAAAACTAAT+CGG | 0.413192 | 8.3:+20080269 | None:intergenic |
| GCTAATTCCATGCCTTCTCT+TGG | 0.416271 | 8.3:-20080962 | MS.gene72632:CDS |
| ATAGGAAGTGACCAACTATA+TGG | 0.422490 | 8.3:+20079810 | None:intergenic |
| GTTTAATGCTTAAGCAAAAC+AGG | 0.422568 | 8.3:-20079116 | MS.gene72632:CDS |
| ATGCTTGCTAGTGTAACAAT+AGG | 0.433859 | 8.3:+20079792 | None:intergenic |
| ACAGATTCGGGTTTAGGAAC+AGG | 0.437251 | 8.3:-20080068 | MS.gene72632:CDS |
| TTACATGGAGTTGAAGTATA+AGG | 0.439685 | 8.3:-20080738 | MS.gene72632:CDS |
| ATTGTGATGCAACTACTCAT+TGG | 0.440669 | 8.3:-20079968 | MS.gene72632:CDS |
| GGTGTCCAAATGTGAGGAAA+AGG | 0.448572 | 8.3:-20080358 | MS.gene72632:CDS |
| TAACCGGTGGTTTAGGAAGT+TGG | 0.452691 | 8.3:-20080249 | MS.gene72632:CDS |
| AGCATGGCCTATTAAAGTAT+TGG | 0.452708 | 8.3:-20079451 | MS.gene72632:CDS |
| GCTTATTCTGTACATTGCAT+TGG | 0.454548 | 8.3:+20079425 | None:intergenic |
| AGAGAAGCAGTTTATGTGCT+TGG | 0.467580 | 8.3:-20079225 | MS.gene72632:CDS |
| ATCTTATTTGATGTCTTGGT+CGG | 0.471584 | 8.3:-20080507 | MS.gene72632:CDS |
| TCCAAATGTGGAAAAGTGTT+TGG | 0.472475 | 8.3:-20079757 | MS.gene72632:CDS |
| GACCGAATTCTTCCTTTGCA+TGG | 0.473735 | 8.3:-20079843 | MS.gene72632:CDS |
| CTCCAGTGATGATAGTATAG+AGG | 0.477229 | 8.3:+20079083 | None:intergenic |
| GCATGGCTCCTCCTAAATTG+AGG | 0.479692 | 8.3:-20079047 | MS.gene72632:CDS |
| ATCTTGATTCAACAGAAGAA+TGG | 0.480699 | 8.3:+20079398 | None:intergenic |
| TAGATTCCTATCCATGGCAT+TGG | 0.480860 | 8.3:+20081214 | None:intergenic |
| CATGGCTCCTCCTAAATTGA+GGG | 0.481009 | 8.3:-20079046 | MS.gene72632:CDS |
| CACCATGCAAAGGAAGAATT+CGG | 0.481803 | 8.3:+20079841 | None:intergenic |
| GGAAACAGCGATAATGGTTA+AGG | 0.482747 | 8.3:+20081078 | None:intergenic |
| TTTCTGTATTAAACTACAGA+TGG | 0.484663 | 8.3:-20080198 | MS.gene72632:CDS |
| GAATAGTGCTATTGAAGAGA+GGG | 0.485535 | 8.3:-20079259 | MS.gene72632:CDS |
| GAAAATAACATTGACAAAGA+AGG | 0.485570 | 8.3:-20079681 | MS.gene72632:CDS |
| TTACTGGACTGATAGTTTAG+TGG | 0.485603 | 8.3:-20080306 | MS.gene72632:CDS |
| GGTTTGCTGCTGTTAAATAT+AGG | 0.487367 | 8.3:-20080379 | MS.gene72632:CDS |
| AGCGGTCCTCAATTTCTACT+TGG | 0.488855 | 8.3:-20080605 | MS.gene72632:CDS |
| ATAGTTCAAGTTGCTGCTGT+TGG | 0.491201 | 8.3:-20080431 | MS.gene72632:CDS |
| ACATCTGAAATTGTTTGGCA+TGG | 0.494574 | 8.3:-20079636 | MS.gene72632:CDS |
| TTGTGATGCAACTACTCATT+GGG | 0.494887 | 8.3:-20079967 | MS.gene72632:CDS |
| TGAATAGTGCTATTGAAGAG+AGG | 0.495189 | 8.3:-20079260 | MS.gene72632:CDS |
| AATTGGAAATCAAAATTCAA+TGG | 0.495406 | 8.3:-20080092 | MS.gene72632:CDS |
| CAAGTTGCTGCTGTTGGCGT+TGG | 0.498230 | 8.3:-20080425 | MS.gene72632:CDS |
| ATCCCAAGATCCACCGCATA+GGG | 0.509363 | 8.3:+20080132 | None:intergenic |
| ATTGTTGAAATTCTGGATGA+TGG | 0.511008 | 8.3:-20080636 | MS.gene72632:CDS |
| TATAGTTGCACTTCCAAATG+TGG | 0.517480 | 8.3:-20079769 | MS.gene72632:CDS |
| GAGATCAACAGAGAGTTTGA+CGG | 0.519283 | 8.3:+20081057 | None:intergenic |
| AAAATAACATTGACAAAGAA+GGG | 0.520371 | 8.3:-20079680 | MS.gene72632:CDS |
| TCCCTCTATACTATCATCAC+TGG | 0.526334 | 8.3:-20079085 | MS.gene72632:CDS |
| GCAGAAGGCAGGACCTAAAA+CGG | 0.527369 | 8.3:-20080046 | MS.gene72632:CDS |
| TAGTGCTATTGAAGAGAGGG+AGG | 0.527847 | 8.3:-20079256 | MS.gene72632:CDS |
| CTGGTGATTGTGATTACAAA+TGG | 0.529169 | 8.3:-20080472 | MS.gene72632:CDS |
| TGATCATGACGGTGAGGCAT+AGG | 0.532938 | 8.3:+20081028 | None:intergenic |
| GCGGGACTAACATCGAAGAT+TGG | 0.534187 | 8.3:-20079140 | MS.gene72632:CDS |
| GTCCTCAATTTCTACTTGGA+AGG | 0.534932 | 8.3:-20080601 | MS.gene72632:CDS |
| TTGAGACAAAAGTATTTGCA+AGG | 0.536044 | 8.3:+20081109 | None:intergenic |
| TTCTGTATTAAACTACAGAT+GGG | 0.537735 | 8.3:-20080197 | MS.gene72632:CDS |
| GTGAGGAAAAGGAGTAGCAA+GGG | 0.538430 | 8.3:-20080347 | MS.gene72632:CDS |
| ACCAAAGATGAAACATTACA+TGG | 0.541625 | 8.3:-20080753 | MS.gene72632:CDS |
| GTGTAGAACCTCCATATAGT+TGG | 0.552822 | 8.3:-20079821 | MS.gene72632:CDS |
| AGGTGAGGAAGAGTTGGTTG+AGG | 0.553378 | 8.3:-20080006 | MS.gene72632:CDS |
| AATCCCAAGATCCACCGCAT+AGG | 0.553870 | 8.3:+20080131 | None:intergenic |
| CCTAAAGTGGATTGTTGCCG+CGG | 0.561298 | 8.3:-20079159 | MS.gene72632:CDS |
| AATGTCTCAAGTGTCTCTTT+GGG | 0.563830 | 8.3:+20079549 | None:intergenic |
| CGGGTTTAGGAACAGGCAGA+AGG | 0.567799 | 8.3:-20080061 | MS.gene72632:CDS |
| CGGTTTATTCTGCATCTCGA+AGG | 0.569485 | 8.3:-20080026 | MS.gene72632:CDS |
| TTTAGGAACAGGCAGAAGGC+AGG | 0.571095 | 8.3:-20080057 | MS.gene72632:CDS |
| CTAAAGTGGATTGTTGCCGC+GGG | 0.575399 | 8.3:-20079158 | MS.gene72632:CDS |
| TGTGACACCAAGAGAAGGCA+TGG | 0.576519 | 8.3:+20080955 | None:intergenic |
| TCTCGAAGGTGAGGAAGAGT+TGG | 0.577120 | 8.3:-20080012 | MS.gene72632:CDS |
| TCCAGTGATGATAGTATAGA+GGG | 0.580375 | 8.3:+20079084 | None:intergenic |
| GCAACAATCCACTTTAGGAA+AGG | 0.581142 | 8.3:+20079164 | None:intergenic |
| GAGCTGATCTCTATGGAAAG+TGG | 0.582667 | 8.3:-20079614 | MS.gene72632:CDS |
| GCAGCAAACCACCTAAAAGC+AGG | 0.583806 | 8.3:+20080392 | None:intergenic |
| GACCTTCCAAGTAGAAATTG+AGG | 0.586703 | 8.3:+20080599 | None:intergenic |
| TTTCGATTTACCCTATGCGG+TGG | 0.586710 | 8.3:-20080142 | MS.gene72632:CDS |
| GCTATGTAGATTCCTATCCA+TGG | 0.588339 | 8.3:+20081208 | None:intergenic |
| ATTTCAGCAAACCAATGCCA+TGG | 0.592792 | 8.3:-20081225 | MS.gene72632:CDS |
| TTCTGTGTGACACCAAGAGA+AGG | 0.606691 | 8.3:+20080950 | None:intergenic |
| ATGTCTGCAGATCTCATCAA+AGG | 0.611092 | 8.3:-20081157 | MS.gene72632:CDS |
| TTGTTTCGATTTACCCTATG+CGG | 0.611581 | 8.3:-20080145 | MS.gene72632:CDS |
| CAAATGTCCCTCAATTTAGG+AGG | 0.613143 | 8.3:+20079039 | None:intergenic |
| ACTACTCATTGGGTTGAACA+AGG | 0.615223 | 8.3:-20079957 | MS.gene72632:CDS |
| AGCAAACCAATGCCATGGAT+AGG | 0.618922 | 8.3:-20081220 | MS.gene72632:CDS |
| AATATAGGTGTCCAAATGTG+AGG | 0.619576 | 8.3:-20080364 | MS.gene72632:CDS |
| GAGCCAACTTCCTAAACCAC+CGG | 0.620931 | 8.3:+20080246 | None:intergenic |
| TATTCTGCATCTCGAAGGTG+AGG | 0.624822 | 8.3:-20080021 | MS.gene72632:CDS |
| CATAGCCAAAACATTCAACA+TGG | 0.624825 | 8.3:+20080919 | None:intergenic |
| TATTAAACTACAGATGGGGA+TGG | 0.629487 | 8.3:-20080192 | MS.gene72632:CDS |
| CTCTATACTATCATCACTGG+AGG | 0.632764 | 8.3:-20079082 | MS.gene72632:CDS |
| TGTGAGGAAAAGGAGTAGCA+AGG | 0.636275 | 8.3:-20080348 | MS.gene72632:CDS |
| GGAGGAGAATGACATTTGCA+TGG | 0.636716 | 8.3:-20079064 | MS.gene72632:CDS |
| GGAGGTTCTACACCATGCAA+AGG | 0.640891 | 8.3:+20079831 | None:intergenic |
| TGAGACAAAAGTATTTGCAA+GGG | 0.647084 | 8.3:+20081110 | None:intergenic |
| ACTTTAATAGGCCATGCTGA+AGG | 0.649984 | 8.3:+20079456 | None:intergenic |
| TCTGTATTAAACTACAGATG+GGG | 0.654899 | 8.3:-20080196 | MS.gene72632:CDS |
| GCTTTGCTAGCTGATCATGA+CGG | 0.671296 | 8.3:+20081017 | None:intergenic |
| AAGACCATAATACTCGTGAG+AGG | 0.671965 | 8.3:-20079368 | MS.gene72632:CDS |
| GGAAGTGACCAACTATATGG+AGG | 0.678302 | 8.3:+20079813 | None:intergenic |
| AATCTTCGATGTTAGTCCCG+CGG | 0.679064 | 8.3:+20079142 | None:intergenic |
| TTAAGGTAAGTCCTTCAGCA+TGG | 0.681137 | 8.3:-20079467 | MS.gene72632:CDS |
| TGGATGATGGCTCATACTAG+CGG | 0.682855 | 8.3:-20080623 | MS.gene72632:CDS |
| CCTTTAACAGATATAGCGTG+TGG | 0.685524 | 8.3:+20079285 | None:intergenic |
| GCTAGCTGATCATGACGGTG+AGG | 0.686156 | 8.3:+20081022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACATTGACAAAGAA+GGG | - | chr8.3:20080620-20080639 | MS.gene72632:CDS | 20.0% |
| !! | AATTGGAAATCAAAATTCAA+TGG | - | chr8.3:20080208-20080227 | MS.gene72632:CDS | 20.0% |
| !! | ATATTATCTTGTGTGTATTA+AGG | - | chr8.3:20080816-20080835 | MS.gene72632:CDS | 20.0% |
| !!! | AACAATTCAATAACAAGTTT+TGG | + | chr8.3:20080382-20080401 | None:intergenic | 20.0% |
| ! | AAAAAATGTTCAATGTTGCA+TGG | - | chr8.3:20080406-20080425 | MS.gene72632:CDS | 25.0% |
| ! | AAAATTCAATGGTACAGATT+CGG | - | chr8.3:20080219-20080238 | MS.gene72632:CDS | 25.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | - | chr8.3:20079434-20079453 | MS.gene72632:CDS | 25.0% |
| ! | GAAAATAACATTGACAAAGA+AGG | - | chr8.3:20080619-20080638 | MS.gene72632:CDS | 25.0% |
| ! | GTTATGATTGCTGATATATT+AGG | - | chr8.3:20080973-20080992 | MS.gene72632:CDS | 25.0% |
| ! | TTCTGTATTAAACTACAGAT+GGG | - | chr8.3:20080103-20080122 | MS.gene72632:CDS | 25.0% |
| ! | TTTCTGTATTAAACTACAGA+TGG | - | chr8.3:20080102-20080121 | MS.gene72632:CDS | 25.0% |
| ! | TTTGTGAGTATTTCAAGAAT+TGG | - | chr8.3:20080191-20080210 | MS.gene72632:CDS | 25.0% |
| !! | GAAAAACATCTGAAATTGTT+TGG | - | chr8.3:20080659-20080678 | MS.gene72632:CDS | 25.0% |
| !! | GTTTGGTGAAAAATTTGATT+AGG | - | chr8.3:20080560-20080579 | MS.gene72632:CDS | 25.0% |
| !! | TTTTCGATGAAATTCACATA+AGG | + | chr8.3:20080604-20080623 | None:intergenic | 25.0% |
| AAATTCAATGGTACAGATTC+GGG | - | chr8.3:20080220-20080239 | MS.gene72632:CDS | 30.0% | |
| ACCAAAGATGAAACATTACA+TGG | - | chr8.3:20079547-20079566 | MS.gene72632:CDS | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | + | chr8.3:20080905-20080924 | None:intergenic | 30.0% | |
| ATTGTTGAAATTCTGGATGA+TGG | - | chr8.3:20079664-20079683 | MS.gene72632:CDS | 30.0% | |
| GAGATGAATTGTTGAAATTC+TGG | - | chr8.3:20079657-20079676 | MS.gene72632:CDS | 30.0% | |
| GTTTAATGCTTAAGCAAAAC+AGG | - | chr8.3:20081184-20081203 | MS.gene72632:CDS | 30.0% | |
| TCAATGTTGCATGGATTTAA+AGG | - | chr8.3:20080415-20080434 | MS.gene72632:CDS | 30.0% | |
| TCCATGTAATGTTTCATCTT+TGG | + | chr8.3:20079551-20079570 | None:intergenic | 30.0% | |
| TCTGTATTAAACTACAGATG+GGG | - | chr8.3:20080104-20080123 | MS.gene72632:CDS | 30.0% | |
| TTACATGGAGTTGAAGTATA+AGG | - | chr8.3:20079562-20079581 | MS.gene72632:CDS | 30.0% | |
| TTACCAATCCGAAAACTAAT+CGG | + | chr8.3:20080034-20080053 | None:intergenic | 30.0% | |
| TTGGATGCCAATACTTTAAT+AGG | + | chr8.3:20080859-20080878 | None:intergenic | 30.0% | |
| ! | ATCTTATTTGATGTCTTGGT+CGG | - | chr8.3:20079793-20079812 | MS.gene72632:CDS | 30.0% |
| ! | TGAAACCATGTTGAATGTTT+TGG | - | chr8.3:20079376-20079395 | MS.gene72632:CDS | 30.0% |
| ! | TTCGATCTTATTTGATGTCT+TGG | - | chr8.3:20079789-20079808 | MS.gene72632:CDS | 30.0% |
| !! | TGAGACAAAAGTATTTGCAA+GGG | + | chr8.3:20079193-20079212 | None:intergenic | 30.0% |
| !! | TGCTTTAATTTGCACTATCA+TGG | - | chr8.3:20079316-20079335 | MS.gene72632:CDS | 30.0% |
| !! | TTGAGACAAAAGTATTTGCA+AGG | + | chr8.3:20079194-20079213 | None:intergenic | 30.0% |
| !!! | AAGGGAATTTTTCAAGTAGA+AGG | - | chr8.3:20079971-20079990 | MS.gene72632:CDS | 30.0% |
| !!! | CTGGTGTTATTTATGAGTTT+TGG | - | chr8.3:20079453-20079472 | MS.gene72632:CDS | 30.0% |
| !!! | TTTTTCAAGTAGAAGGTTAC+TGG | - | chr8.3:20079978-20079997 | MS.gene72632:CDS | 30.0% |
| AAAAACATGTGCAACAGTGA+AGG | - | chr8.3:20079035-20079054 | MS.gene72632:CDS | 35.0% | |
| AATATAGGTGTCCAAATGTG+AGG | - | chr8.3:20079936-20079955 | MS.gene72632:CDS | 35.0% | |
| AATGTCTCAAGTGTCTCTTT+GGG | + | chr8.3:20080754-20080773 | None:intergenic | 35.0% | |
| AGCATGGCCTATTAAAGTAT+TGG | - | chr8.3:20080849-20080868 | MS.gene72632:CDS | 35.0% | |
| ATAGGAAGTGACCAACTATA+TGG | + | chr8.3:20080493-20080512 | None:intergenic | 35.0% | |
| ATTGTGATGCAACTACTCAT+TGG | - | chr8.3:20080332-20080351 | MS.gene72632:CDS | 35.0% | |
| CATAGCCAAAACATTCAACA+TGG | + | chr8.3:20079384-20079403 | None:intergenic | 35.0% | |
| CTGGTGATTGTGATTACAAA+TGG | - | chr8.3:20079828-20079847 | MS.gene72632:CDS | 35.0% | |
| GCTTATTCTGTACATTGCAT+TGG | + | chr8.3:20080878-20080897 | None:intergenic | 35.0% | |
| TAATGTCTCAAGTGTCTCTT+TGG | + | chr8.3:20080755-20080774 | None:intergenic | 35.0% | |
| TAGCTGAGTTTGCAAAAACA+AGG | - | chr8.3:20080773-20080792 | MS.gene72632:CDS | 35.0% | |
| TATAGTTGCACTTCCAAATG+TGG | - | chr8.3:20080531-20080550 | MS.gene72632:CDS | 35.0% | |
| TATTAAACTACAGATGGGGA+TGG | - | chr8.3:20080108-20080127 | MS.gene72632:CDS | 35.0% | |
| TCCAGTGATGATAGTATAGA+GGG | + | chr8.3:20081219-20081238 | None:intergenic | 35.0% | |
| TTACTGGACTGATAGTTTAG+TGG | - | chr8.3:20079994-20080013 | MS.gene72632:CDS | 35.0% | |
| TTGCATGGATTTAAAGGAGT+TGG | - | chr8.3:20080421-20080440 | MS.gene72632:CDS | 35.0% | |
| TTGTGATGCAACTACTCATT+GGG | - | chr8.3:20080333-20080352 | MS.gene72632:CDS | 35.0% | |
| TTGTTTCGATTTACCCTATG+CGG | - | chr8.3:20080155-20080174 | MS.gene72632:CDS | 35.0% | |
| ! | ACATCTGAAATTGTTTGGCA+TGG | - | chr8.3:20080664-20080683 | MS.gene72632:CDS | 35.0% |
| ! | ACCAAACACTTTTCCACATT+TGG | + | chr8.3:20080547-20080566 | None:intergenic | 35.0% |
| ! | ATGCTTGCTAGTGTAACAAT+AGG | + | chr8.3:20080511-20080530 | None:intergenic | 35.0% |
| ! | GAATAGTGCTATTGAAGAGA+GGG | - | chr8.3:20081041-20081060 | MS.gene72632:CDS | 35.0% |
| ! | GATGCAGAATAAACCGTTTT+AGG | + | chr8.3:20080270-20080289 | None:intergenic | 35.0% |
| ! | TGAATAGTGCTATTGAAGAG+AGG | - | chr8.3:20081040-20081059 | MS.gene72632:CDS | 35.0% |
| !! | GGTTTGCTGCTGTTAAATAT+AGG | - | chr8.3:20079921-20079940 | MS.gene72632:CDS | 35.0% |
| !! | TCCAAATGTGGAAAAGTGTT+TGG | - | chr8.3:20080543-20080562 | MS.gene72632:CDS | 35.0% |
| !!! | CATGTTGAATGTTTTGGCTA+TGG | - | chr8.3:20079382-20079401 | MS.gene72632:CDS | 35.0% |
| !!! | TATGAGTTTTGGATCGAACA+TGG | - | chr8.3:20079464-20079483 | MS.gene72632:CDS | 35.0% |
| !!! | TTAGTTTTCGGATTGGTAAC+CGG | - | chr8.3:20080035-20080054 | MS.gene72632:CDS | 35.0% |
| !!! | TTTGGGAGTCTTGTTTTGAA+GGG | + | chr8.3:20080737-20080756 | None:intergenic | 35.0% |
| AAAGAGAGCCTTTCCTAAAG+TGG | - | chr8.3:20081128-20081147 | MS.gene72632:CDS | 40.0% | |
| AAGACCATAATACTCGTGAG+AGG | - | chr8.3:20080932-20080951 | MS.gene72632:CDS | 40.0% | |
| ACTTTAATAGGCCATGCTGA+AGG | + | chr8.3:20080847-20080866 | None:intergenic | 40.0% | |
| AGAGAAGCAGTTTATGTGCT+TGG | - | chr8.3:20081075-20081094 | MS.gene72632:CDS | 40.0% | |
| AGGCAAATGTCCCTCAATTT+AGG | + | chr8.3:20081267-20081286 | None:intergenic | 40.0% | |
| ATGTCTGCAGATCTCATCAA+AGG | - | chr8.3:20079143-20079162 | MS.gene72632:CDS | 40.0% | |
| ATTTCAGCAAACCAATGCCA+TGG | - | chr8.3:20079075-20079094 | MS.gene72632:CDS | 40.0% | |
| CAAATGTCCCTCAATTTAGG+AGG | + | chr8.3:20081264-20081283 | None:intergenic | 40.0% | |
| CACCATGCAAAGGAAGAATT+CGG | + | chr8.3:20080462-20080481 | None:intergenic | 40.0% | |
| CCACACGCTATATCTGTTAA+AGG | - | chr8.3:20081015-20081034 | MS.gene72632:CDS | 40.0% | |
| CCTTTAACAGATATAGCGTG+TGG | + | chr8.3:20081018-20081037 | None:intergenic | 40.0% | |
| CTCCAGTGATGATAGTATAG+AGG | + | chr8.3:20081220-20081239 | None:intergenic | 40.0% | |
| CTCTATACTATCATCACTGG+AGG | - | chr8.3:20081218-20081237 | MS.gene72632:CDS | 40.0% | |
| GACCTTCCAAGTAGAAATTG+AGG | + | chr8.3:20079704-20079723 | None:intergenic | 40.0% | |
| GAGATCAACAGAGAGTTTGA+CGG | + | chr8.3:20079246-20079265 | None:intergenic | 40.0% | |
| GCTATGTAGATTCCTATCCA+TGG | + | chr8.3:20079095-20079114 | None:intergenic | 40.0% | |
| GTCCTCAATTTCTACTTGGA+AGG | - | chr8.3:20079699-20079718 | MS.gene72632:CDS | 40.0% | |
| GTGTAGAACCTCCATATAGT+TGG | - | chr8.3:20080479-20080498 | MS.gene72632:CDS | 40.0% | |
| TAGATTCCTATCCATGGCAT+TGG | + | chr8.3:20079089-20079108 | None:intergenic | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | - | chr8.3:20079722-20079741 | MS.gene72632:CDS | 40.0% | |
| TCCCTCTATACTATCATCAC+TGG | - | chr8.3:20081215-20081234 | MS.gene72632:CDS | 40.0% | |
| TTAAGGTAAGTCCTTCAGCA+TGG | - | chr8.3:20080833-20080852 | MS.gene72632:CDS | 40.0% | |
| TTTGACGGAAACAGCGATAA+TGG | + | chr8.3:20079231-20079250 | None:intergenic | 40.0% | |
| ! | AATGGTACAGATTCGGGTTT+AGG | - | chr8.3:20080226-20080245 | MS.gene72632:CDS | 40.0% |
| ! | CTACTCCTTTTCCTCACATT+TGG | + | chr8.3:20079950-20079969 | None:intergenic | 40.0% |
| ! | GCAACAATCCACTTTAGGAA+AGG | + | chr8.3:20081139-20081158 | None:intergenic | 40.0% |
| ! | GGAAACAGCGATAATGGTTA+AGG | + | chr8.3:20079225-20079244 | None:intergenic | 40.0% |
| ! | TGGTCGGTTAAATTTTGTGC+TGG | - | chr8.3:20079809-20079828 | MS.gene72632:CDS | 40.0% |
| !! | ACTACTCATTGGGTTGAACA+AGG | - | chr8.3:20080343-20080362 | MS.gene72632:CDS | 40.0% |
| !! | ATAGTTCAAGTTGCTGCTGT+TGG | - | chr8.3:20079869-20079888 | MS.gene72632:CDS | 40.0% |
| !! | GTACTATTGCTCCTGCTTTT+AGG | - | chr8.3:20079897-20079916 | MS.gene72632:CDS | 40.0% |
| !!! | AGTCCGATTAGTTTTCGGAT+TGG | - | chr8.3:20080028-20080047 | MS.gene72632:CDS | 40.0% |
| !!! | CTTTGGGAGTCTTGTTTTGA+AGG | + | chr8.3:20080738-20080757 | None:intergenic | 40.0% |
| !!! | GAGAGAGTCCGATTAGTTTT+CGG | - | chr8.3:20080023-20080042 | MS.gene72632:CDS | 40.0% |
| AATCTTCGATGTTAGTCCCG+CGG | + | chr8.3:20081161-20081180 | None:intergenic | 45.0% | |
| ACAGCCTCTCACGAGTATTA+TGG | + | chr8.3:20080939-20080958 | None:intergenic | 45.0% | |
| AGCAAACCAATGCCATGGAT+AGG | - | chr8.3:20079080-20079099 | MS.gene72632:CDS | 45.0% | |
| AGCGGTCCTCAATTTCTACT+TGG | - | chr8.3:20079695-20079714 | MS.gene72632:CDS | 45.0% | |
| CATGGCTCCTCCTAAATTGA+GGG | - | chr8.3:20081254-20081273 | MS.gene72632:CDS | 45.0% | |
| CGGTTTATTCTGCATCTCGA+AGG | - | chr8.3:20080274-20080293 | MS.gene72632:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | - | chr8.3:20080457-20080476 | MS.gene72632:CDS | 45.0% | |
| GAGCTGATCTCTATGGAAAG+TGG | - | chr8.3:20080686-20080705 | MS.gene72632:CDS | 45.0% | |
| GCATCAGAACTCGCAAACTA+TGG | - | chr8.3:20079165-20079184 | MS.gene72632:CDS | 45.0% | |
| GCTAATTCCATGCCTTCTCT+TGG | - | chr8.3:20079338-20079357 | MS.gene72632:CDS | 45.0% | |
| GCTTTGCTAGCTGATCATGA+CGG | + | chr8.3:20079286-20079305 | None:intergenic | 45.0% | |
| GGAAGTGACCAACTATATGG+AGG | + | chr8.3:20080490-20080509 | None:intergenic | 45.0% | |
| GGAGGAGAATGACATTTGCA+TGG | - | chr8.3:20081236-20081255 | MS.gene72632:CDS | 45.0% | |
| GGTGTCCAAATGTGAGGAAA+AGG | - | chr8.3:20079942-20079961 | MS.gene72632:CDS | 45.0% | |
| GTGAGGAAAAGGAGTAGCAA+GGG | - | chr8.3:20079953-20079972 | MS.gene72632:CDS | 45.0% | |
| TAACCGGTGGTTTAGGAAGT+TGG | - | chr8.3:20080051-20080070 | MS.gene72632:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGTG+AGG | - | chr8.3:20080279-20080298 | MS.gene72632:CDS | 45.0% | |
| TGTGAGGAAAAGGAGTAGCA+AGG | - | chr8.3:20079952-20079971 | MS.gene72632:CDS | 45.0% | |
| TTCTGTGTGACACCAAGAGA+AGG | + | chr8.3:20079353-20079372 | None:intergenic | 45.0% | |
| TTTCGATTTACCCTATGCGG+TGG | - | chr8.3:20080158-20080177 | MS.gene72632:CDS | 45.0% | |
| ! | ACAGATTCGGGTTTAGGAAC+AGG | - | chr8.3:20080232-20080251 | MS.gene72632:CDS | 45.0% |
| ! | TAGTGCTATTGAAGAGAGGG+AGG | - | chr8.3:20081044-20081063 | MS.gene72632:CDS | 45.0% |
| ! | TGGATGATGGCTCATACTAG+CGG | - | chr8.3:20079677-20079696 | MS.gene72632:CDS | 45.0% |
| !! | CTATTGCTCCTGCTTTTAGG+TGG | - | chr8.3:20079900-20079919 | MS.gene72632:CDS | 45.0% |
| AATCCCAAGATCCACCGCAT+AGG | + | chr8.3:20080172-20080191 | None:intergenic | 50.0% | |
| ATCCCAAGATCCACCGCATA+GGG | + | chr8.3:20080171-20080190 | None:intergenic | 50.0% | |
| GAGCCAACTTCCTAAACCAC+CGG | + | chr8.3:20080057-20080076 | None:intergenic | 50.0% | |
| GCAGAAGGCAGGACCTAAAA+CGG | - | chr8.3:20080254-20080273 | MS.gene72632:CDS | 50.0% | |
| GCAGCAAACCACCTAAAAGC+AGG | + | chr8.3:20079911-20079930 | None:intergenic | 50.0% | |
| GCATGGCTCCTCCTAAATTG+AGG | - | chr8.3:20081253-20081272 | MS.gene72632:CDS | 50.0% | |
| GCGGGACTAACATCGAAGAT+TGG | - | chr8.3:20081160-20081179 | MS.gene72632:CDS | 50.0% | |
| GGAGGTTCTACACCATGCAA+AGG | + | chr8.3:20080472-20080491 | None:intergenic | 50.0% | |
| TACCCTATGCGGTGGATCTT+GGG | - | chr8.3:20080166-20080185 | MS.gene72632:CDS | 50.0% | |
| TCTCGAAGGTGAGGAAGAGT+TGG | - | chr8.3:20080288-20080307 | MS.gene72632:CDS | 50.0% | |
| TGATCATGACGGTGAGGCAT+AGG | + | chr8.3:20079275-20079294 | None:intergenic | 50.0% | |
| TGGCATGGAGCTGATCTCTA+TGG | - | chr8.3:20080679-20080698 | MS.gene72632:CDS | 50.0% | |
| TGTGACACCAAGAGAAGGCA+TGG | + | chr8.3:20079348-20079367 | None:intergenic | 50.0% | |
| TTACCCTATGCGGTGGATCT+TGG | - | chr8.3:20080165-20080184 | MS.gene72632:CDS | 50.0% | |
| TTTAGGAACAGGCAGAAGGC+AGG | - | chr8.3:20080243-20080262 | MS.gene72632:CDS | 50.0% | |
| ! | AGGTGAGGAAGAGTTGGTTG+AGG | - | chr8.3:20080294-20080313 | MS.gene72632:CDS | 50.0% |
| ! | GGATTGGTAACCGGTGGTTT+AGG | - | chr8.3:20080044-20080063 | MS.gene72632:CDS | 50.0% |
| !! | CCTAAAGTGGATTGTTGCCG+CGG | - | chr8.3:20081141-20081160 | MS.gene72632:CDS | 50.0% |
| !! | CTAAAGTGGATTGTTGCCGC+GGG | - | chr8.3:20081142-20081161 | MS.gene72632:CDS | 50.0% |
| !!! | GTTTTCGGATTGGTAACCGG+TGG | - | chr8.3:20080038-20080057 | MS.gene72632:CDS | 50.0% |
| CAAGTTGCTGCTGTTGGCGT+TGG | - | chr8.3:20079875-20079894 | MS.gene72632:CDS | 55.0% | |
| CCGCGGCAACAATCCACTTT+AGG | + | chr8.3:20081144-20081163 | None:intergenic | 55.0% | |
| CGGGTTTAGGAACAGGCAGA+AGG | - | chr8.3:20080239-20080258 | MS.gene72632:CDS | 55.0% | |
| GCTAGCTGATCATGACGGTG+AGG | + | chr8.3:20079281-20079300 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 20079023 | 20081299 | 20079023 | ID=MS.gene72632 |
| chr8.3 | mRNA | 20079023 | 20081299 | 20079023 | ID=MS.gene72632.t1;Parent=MS.gene72632 |
| chr8.3 | exon | 20079023 | 20081299 | 20079023 | ID=MS.gene72632.t1.exon1;Parent=MS.gene72632.t1 |
| chr8.3 | CDS | 20079023 | 20081299 | 20079023 | ID=cds.MS.gene72632.t1;Parent=MS.gene72632.t1 |
| Gene Sequence |
| Protein sequence |
