AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72935

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72935.t1 MTR_4g098850 95.808 501 20 1 1 500 281 781 0.0 994
MS.gene72935.t1 MTR_4g098850 89.189 148 16 0 353 500 2 149 3.30e-88 288
MS.gene72935.t1 MTR_5g014090 61.319 561 148 10 2 500 5 558 0.0 632
MS.gene72935.t1 MTR_5g014090 59.961 512 136 10 2 451 5 509 0.0 556
MS.gene72935.t1 MTR_1g097690 39.421 553 254 11 4 500 12 539 9.48e-126 380
MS.gene72935.t1 MTR_1g097690 37.352 506 239 9 3 452 11 494 1.11e-105 324
MS.gene72935.t1 MTR_1g103330 36.981 530 274 11 4 500 7 509 1.65e-103 322
MS.gene72935.t1 MTR_1g071680 37.403 516 264 9 4 500 7 482 2.61e-102 318
MS.gene72935.t1 MTR_7g095260 37.911 517 259 11 4 500 8 482 2.51e-100 312
MS.gene72935.t1 MTR_7g095260 40.089 449 224 9 56 500 23 430 6.14e-95 297
MS.gene72935.t1 MTR_6g042240 56.098 205 87 2 296 500 316 517 1.01e-74 246
MS.gene72935.t1 MTR_6g042240 56.098 205 87 2 296 500 356 557 2.32e-74 246
MS.gene72935.t1 MTR_6g042240 56.098 205 87 2 296 500 369 570 4.47e-74 246
MS.gene72935.t1 MTR_5g006820 51.415 212 97 2 292 500 340 548 1.44e-66 226
MS.gene72935.t1 MTR_5g006820 36.145 166 86 3 14 161 17 180 1.07e-23 105
MS.gene72935.t1 MTR_8g043480 46.414 237 109 4 271 500 15 240 1.05e-63 209
MS.gene72935.t1 MTR_8g043480 46.414 237 109 4 271 500 145 370 5.11e-62 209
MS.gene72935.t1 MTR_8g043480 45.833 72 39 0 75 146 12 83 2.07e-14 75.5
MS.gene72935.t1 MTR_8g043480 46.414 237 109 4 271 500 210 435 1.79e-61 209
MS.gene72935.t1 MTR_8g043480 45.833 72 39 0 75 146 77 148 1.72e-14 76.3
MS.gene72935.t1 MTR_7g100070 50.259 193 90 1 308 500 171 357 7.64e-60 204
MS.gene72935.t1 MTR_7g100070 37.107 159 84 2 10 152 11 169 5.56e-24 105
MS.gene72935.t1 MTR_7g100070 50.259 193 90 1 308 500 170 356 7.95e-60 204
MS.gene72935.t1 MTR_7g100070 37.342 158 84 2 10 152 11 168 3.84e-24 105
MS.gene72935.t1 MTR_7g100070 50.259 193 90 1 308 500 211 397 3.33e-59 203
MS.gene72935.t1 MTR_7g100070 37.107 159 84 2 10 152 51 209 4.89e-24 105
MS.gene72935.t1 MTR_8g091360 44.348 230 119 2 280 500 280 509 6.54e-59 204
MS.gene72935.t1 MTR_8g091360 53.623 69 32 0 74 142 142 210 1.57e-17 85.9
MS.gene72935.t1 MTR_6g072010 46.316 190 101 1 312 500 155 344 4.46e-57 194
MS.gene72935.t1 MTR_6g072010 45.122 82 42 2 62 142 37 116 3.20e-15 77.8
MS.gene72935.t1 MTR_6g072010 46.316 190 101 1 312 500 166 355 7.78e-57 194
MS.gene72935.t1 MTR_6g072010 45.122 82 42 2 62 142 48 127 4.14e-15 77.4
MS.gene72935.t1 MTR_6g009260 40.977 266 129 7 263 500 96 361 1.81e-54 189
MS.gene72935.t1 MTR_6g009260 44.156 77 41 1 68 142 51 127 4.62e-15 77.8
MS.gene72935.t1 MTR_1g038810 47.525 202 102 2 303 500 170 371 3.94e-54 189
MS.gene72935.t1 MTR_1g038810 37.333 150 76 4 1 145 1 137 6.32e-17 83.6
MS.gene72935.t1 MTR_1g038810 47.525 202 102 2 303 500 166 367 4.00e-54 188
MS.gene72935.t1 MTR_1g038810 36.735 147 77 3 1 145 1 133 6.94e-15 77.0
MS.gene72935.t1 MTR_8g091360 42.308 182 96 2 280 452 280 461 5.20e-43 159
MS.gene72935.t1 MTR_8g091360 53.623 69 32 0 74 142 142 210 1.30e-17 85.9
MS.gene72935.t1 MTR_6g092670 33.032 221 113 6 309 500 643 857 1.56e-27 117
MS.gene72935.t1 MTR_1g078100 33.178 214 117 5 309 500 328 537 1.37e-25 111
MS.gene72935.t1 MTR_1g078100 33.178 214 117 5 309 500 608 817 1.44e-25 111
MS.gene72935.t1 MTR_1g078100 33.178 214 117 5 309 500 339 548 1.57e-25 111
MS.gene72935.t1 MTR_1g021730 33.088 136 82 6 345 478 124 252 2.74e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72935.t1 AT4G18010 51.384 578 200 11 2 500 5 580 0.0 522
MS.gene72935.t1 AT4G18010 51.211 578 201 10 2 500 5 580 1.61e-180 521
MS.gene72935.t1 AT1G34120 38.552 511 282 6 7 498 27 524 3.86e-115 352
MS.gene72935.t1 AT1G34120 38.447 515 281 6 7 498 27 528 1.28e-114 350
MS.gene72935.t1 AT1G34120 38.447 515 280 7 7 498 27 527 1.00e-112 345
MS.gene72935.t1 AT1G71710 36.395 588 277 17 4 500 16 597 2.58e-108 337
MS.gene72935.t1 AT1G71710 36.395 588 277 17 4 500 7 588 3.13e-108 336
MS.gene72935.t1 AT2G32010 36.590 522 278 11 14 500 17 520 3.88e-101 316
MS.gene72935.t1 AT2G32010 36.590 522 278 11 14 500 17 520 3.88e-101 316
MS.gene72935.t1 AT2G32010 36.590 522 278 11 14 500 17 520 3.88e-101 316
MS.gene72935.t1 AT2G32010 36.590 522 278 11 14 500 17 520 3.88e-101 316
MS.gene72935.t1 AT1G34120 37.500 456 253 6 7 443 27 469 4.26e-92 289
MS.gene72935.t1 AT1G34120 36.883 385 219 5 125 498 2 373 1.31e-74 242
MS.gene72935.t1 AT3G63240 48.106 264 108 4 266 500 209 472 1.50e-68 229
MS.gene72935.t1 AT3G63240 41.176 170 86 3 4 161 7 174 8.79e-30 123
MS.gene72935.t1 AT3G63240 48.106 264 108 4 266 500 209 472 1.50e-68 229
MS.gene72935.t1 AT3G63240 41.176 170 86 3 4 161 7 174 8.79e-30 123
MS.gene72935.t1 AT1G05470 52.551 196 90 1 308 500 348 543 2.09e-66 225
MS.gene72935.t1 AT1G05470 36.364 176 94 3 2 161 5 178 7.15e-29 120
MS.gene72935.t1 AT1G05470 52.551 196 90 1 308 500 348 543 2.09e-66 225
MS.gene72935.t1 AT1G05470 36.364 176 94 3 2 161 5 178 7.15e-29 120
MS.gene72935.t1 AT2G37440 44.664 253 120 4 263 500 56 303 3.28e-61 206
MS.gene72935.t1 AT2G37440 42.045 88 32 1 77 145 3 90 6.16e-15 77.0
MS.gene72935.t1 AT5G04980 48.223 197 98 2 308 500 156 352 2.79e-60 203
MS.gene72935.t1 AT5G65090 45.933 209 110 1 295 500 185 393 1.12e-59 204
MS.gene72935.t1 AT5G65090 50.602 83 36 1 71 153 8 85 5.63e-19 90.1
MS.gene72935.t1 AT5G04980 48.223 197 98 2 308 500 191 387 1.21e-59 203
MS.gene72935.t1 AT5G04980 46.269 67 36 0 71 137 7 73 2.83e-13 72.0
MS.gene72935.t1 AT5G04980 48.223 197 98 2 308 500 191 387 1.21e-59 203
MS.gene72935.t1 AT5G04980 46.269 67 36 0 71 137 7 73 2.83e-13 72.0
MS.gene72935.t1 AT5G04980 48.223 197 98 2 308 500 220 416 1.27e-59 204
MS.gene72935.t1 AT5G04980 46.269 67 36 0 71 137 36 102 2.24e-13 72.8
MS.gene72935.t1 AT5G65090 45.933 209 110 1 295 500 248 456 4.74e-59 204
MS.gene72935.t1 AT5G65090 50.602 83 36 1 71 153 71 148 6.73e-19 90.1
MS.gene72935.t1 AT5G65090 45.933 209 110 1 295 500 248 456 4.74e-59 204
MS.gene72935.t1 AT5G65090 50.602 83 36 1 71 153 71 148 6.73e-19 90.1
MS.gene72935.t1 AT2G01900 41.852 270 147 4 241 500 75 344 1.16e-58 200
MS.gene72935.t1 AT2G01900 34.783 138 78 3 11 147 7 133 1.65e-14 75.9
MS.gene72935.t1 AT2G01900 41.852 270 147 4 241 500 83 352 1.33e-58 200
MS.gene72935.t1 AT2G01900 34.868 152 83 4 1 147 1 141 6.34e-16 80.5
MS.gene72935.t1 AT2G37440 48.148 216 105 3 287 500 174 384 1.90e-58 201
MS.gene72935.t1 AT2G37440 34.395 157 88 2 5 149 6 159 1.57e-23 103
MS.gene72935.t1 AT2G37440 48.148 216 105 3 287 500 174 384 1.90e-58 201
MS.gene72935.t1 AT2G37440 34.395 157 88 2 5 149 6 159 1.57e-23 103
MS.gene72935.t1 AT2G01900 40.741 270 141 5 241 500 75 335 4.00e-54 187
MS.gene72935.t1 AT2G01900 34.783 138 78 3 11 147 7 133 1.76e-14 75.9
MS.gene72935.t1 AT2G31830 34.247 219 113 5 309 500 661 875 6.61e-29 121
MS.gene72935.t1 AT2G31830 34.247 219 113 5 309 500 661 875 6.96e-29 121
MS.gene72935.t1 AT2G31830 34.247 219 113 5 309 500 661 875 9.90e-29 121
MS.gene72935.t1 AT1G05630 33.790 219 114 5 309 500 652 866 3.50e-28 119
MS.gene72935.t1 AT1G05630 33.790 219 114 5 309 500 652 866 3.54e-28 119
MS.gene72935.t1 AT2G43900 32.877 219 116 4 309 500 658 872 3.77e-28 119
MS.gene72935.t1 AT2G43900 32.877 219 116 4 309 500 658 872 4.05e-28 119
MS.gene72935.t1 AT1G65580 30.000 230 128 6 300 500 342 567 7.18e-26 112
MS.gene72935.t1 AT1G65580 30.000 230 128 6 300 500 608 833 8.09e-26 112
MS.gene72935.t1 AT1G47510 26.887 212 136 7 292 500 30 225 1.79e-14 74.3
MS.gene72935.t1 AT1G47510 26.887 212 136 7 292 500 92 287 2.93e-14 74.3
MS.gene72935.t1 AT1G05630 26.978 278 155 13 242 500 652 900 2.89e-12 70.1

Find 92 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAAGAGTTTCTTCTAAT+TGG 0.147774 8.2:-23398454 None:intergenic
TCAAGTTGGTGTTGGTCTTA+TGG 0.149567 8.2:+23398996 MS.gene72935:CDS
CTAATGATTGCATCCCATTT+TGG 0.152402 8.2:-23398367 None:intergenic
CCATCAGATATTTACATTAT+TGG 0.166162 8.2:+23397978 MS.gene72935:CDS
CAAGTTGGTGTTGGTCTTAT+GGG 0.196587 8.2:+23398997 MS.gene72935:CDS
CATCAGATATTTACATTATT+GGG 0.224092 8.2:+23397979 MS.gene72935:CDS
GTTTGTTCCCATCTGGCTTC+AGG 0.254452 8.2:+23399652 MS.gene72935:CDS
TTTCATTAATGCAGGTGTTT+TGG 0.294116 8.2:+23395970 MS.gene72935:intron
CTGGAAATTTGAGTTTGTTA+TGG 0.317825 8.2:+23398728 MS.gene72935:CDS
AAAAGTTTACACCAAAGTTC+TGG 0.327115 8.2:+23398709 MS.gene72935:CDS
TCAGATACTGCTTCCTTGTA+TGG 0.343673 8.2:+23398676 MS.gene72935:CDS
ATAGTAAACCAATCCCAAAA+TGG 0.344571 8.2:+23398353 MS.gene72935:CDS
GTGCTTTGTTTGTTCCCATC+TGG 0.345696 8.2:+23399645 MS.gene72935:CDS
ATCTTCAAACTATACTTGAT+TGG 0.364386 8.2:+23398584 MS.gene72935:CDS
AACTCAAATTTCCAGAACTT+TGG 0.382670 8.2:-23398720 None:intergenic
TTGAATGCTGGAAATGTGTT+TGG 0.405802 8.2:+23398322 MS.gene72935:CDS
TAGGAATATATGTGTCTGTT+TGG 0.412001 8.2:+23398929 MS.gene72935:CDS
TGTTGGTCTTATGGGCTACA+TGG 0.414936 8.2:+23399005 MS.gene72935:CDS
AACACATTTCCAGCATTCAA+TGG 0.416180 8.2:-23398319 None:intergenic
ATGTAATGATCTTGAAATTG+AGG 0.426971 8.2:+23397935 MS.gene72935:CDS
GCTAAGCAATGAATTATGTA+AGG 0.434358 8.2:+23400356 MS.gene72935:intron
ATTGGTACATGGAATGTTGC+TGG 0.445478 8.2:+23397903 MS.gene72935:CDS
GTTAAATTCATACTTGTATG+TGG 0.447949 8.2:-23400424 None:intergenic
CTAACAATCCGAACATACTT+AGG 0.448912 8.2:-23398895 None:intergenic
CATTTGAAAGTTTCTCAAGT+TGG 0.449419 8.2:+23398982 MS.gene72935:CDS
GTTATGGAGCGAAAAGCAAC+AGG 0.451653 8.2:+23398744 MS.gene72935:CDS
ATTGGATCTAACCGAAGTTC+AGG 0.453469 8.2:-23398607 None:intergenic
TAGTAAACCAATCCCAAAAT+GGG 0.467774 8.2:+23398354 MS.gene72935:CDS
AAAGTTTCTCAAGTTGGTGT+TGG 0.469427 8.2:+23398988 MS.gene72935:CDS
ATGGTTGAATATAAAGCAAA+AGG 0.473863 8.2:+23396013 MS.gene72935:CDS
CATGTCAGATACATCAAGAA+TGG 0.475267 8.2:-23398791 None:intergenic
AGCATCATACCTCACTTCCT+TGG 0.478675 8.2:-23397790 None:intergenic
AGGAATATATGTGTCTGTTT+GGG 0.487542 8.2:+23398930 MS.gene72935:CDS
GTATTTGAGGGATGGAAAGA+GGG 0.487961 8.2:+23400384 MS.gene72935:CDS
TGTAAGGGACATGTATTTGA+GGG 0.489849 8.2:+23400372 MS.gene72935:CDS
AATGAATCAACATGATGGAT+TGG 0.491515 8.2:-23398625 None:intergenic
TCGGATTGTTAGCAAGCAAA+TGG 0.495576 8.2:+23398906 MS.gene72935:CDS
AAGAACTCTAAACAAATCTT+CGG 0.498609 8.2:+23398390 MS.gene72935:CDS
CATCCACAGTGATGAAGAAA+TGG 0.502176 8.2:+23395994 MS.gene72935:CDS
GAATTATCGTATCAATATGT+CGG 0.502246 8.2:+23400085 MS.gene72935:CDS
AATCACATCCTAAGTATGTT+CGG 0.504427 8.2:+23398887 MS.gene72935:CDS
TACTTGATTGGCCTGAACTT+CGG 0.507822 8.2:+23398596 MS.gene72935:CDS
TCGGAAATGAATCAACATGA+TGG 0.509500 8.2:-23398630 None:intergenic
CATGCTTGCACTTACCATGC+TGG 0.509684 8.2:-23400498 None:intergenic
CTTTCTGACCTGAAGCCAGA+TGG 0.516560 8.2:-23399660 None:intergenic
CGAGCTCATGAAATTCGATC+AGG 0.518732 8.2:+23400148 MS.gene72935:CDS
ATGTAAGGGACATGTATTTG+AGG 0.519189 8.2:+23400371 MS.gene72935:CDS
GAGTTTCTTCTAATTGGAGA+AGG 0.522093 8.2:-23398448 None:intergenic
GAGGTTGTTCCATTGAATGC+TGG 0.522786 8.2:+23398310 MS.gene72935:CDS
GGGTACAAAGAAAGCTAAGA+AGG 0.523270 8.2:+23398950 MS.gene72935:CDS
TTTCATTTCAAAACCATACA+AGG 0.524618 8.2:-23398689 None:intergenic
CTGGCTTCAGGTCAGAAAGA+TGG 0.528110 8.2:+23399664 MS.gene72935:CDS
AATTCATACTTGTATGTGGG+TGG 0.528358 8.2:-23400420 None:intergenic
TGTATTTGAGGGATGGAAAG+AGG 0.530931 8.2:+23400383 MS.gene72935:CDS
TTTCTTCTAATTGGAGAAGG+AGG 0.531842 8.2:-23398445 None:intergenic
AGCTAGTAGATCTAAAGAAG+TGG 0.534737 8.2:+23400123 MS.gene72935:CDS
TGATAGTGCTTTAGACAAGA+AGG 0.536398 8.2:+23398498 MS.gene72935:CDS
AGGGACATGTATTTGAGGGA+TGG 0.537693 8.2:+23400376 MS.gene72935:CDS
TCAGGGTAACAATTGGTACA+TGG 0.538825 8.2:+23397892 MS.gene72935:intron
CTAAACAAATCTTCGGAACC+CGG 0.539596 8.2:+23398397 MS.gene72935:CDS
TTCTTCTAATTGGAGAAGGA+GGG 0.548470 8.2:-23398444 None:intergenic
TTTCTGACCTGAAGCCAGAT+GGG 0.550168 8.2:-23399659 None:intergenic
TGTAATGATCTTGAAATTGA+GGG 0.550263 8.2:+23397936 MS.gene72935:CDS
GCGAATAATGAAGATGCTGA+TGG 0.554348 8.2:+23398850 MS.gene72935:CDS
TCTTCTAATTGGAGAAGGAG+GGG 0.556756 8.2:-23398443 None:intergenic
CCAATAATGTAAATATCTGA+TGG 0.559707 8.2:-23397978 None:intergenic
AACTCTGATAAACATGTGGG+TGG 0.566295 8.2:+23400444 MS.gene72935:CDS
CAGCTGGCTTACTCATGTGA+TGG 0.566924 8.2:-23399778 None:intergenic
ATTCATACTTGTATGTGGGT+GGG 0.567042 8.2:-23400419 None:intergenic
TTAAATTCATACTTGTATGT+GGG 0.576883 8.2:-23400423 None:intergenic
TCAATTTCAAGATCATTACA+TGG 0.587609 8.2:-23397933 None:intergenic
GTTGGTCTTATGGGCTACAT+GGG 0.592920 8.2:+23399006 MS.gene72935:CDS
TATTTGAGGGATGGAAAGAG+GGG 0.593853 8.2:+23400385 MS.gene72935:CDS
ATGATCTTGAAATTGAGGGT+TGG 0.596603 8.2:+23397940 MS.gene72935:CDS
ATTGTTAGCAAGCAAATGGT+AGG 0.604748 8.2:+23398910 MS.gene72935:CDS
TATGGGCTACATGGGAAACA+AGG 0.609052 8.2:+23399014 MS.gene72935:CDS
TATCGTATCAATATGTCGGA+TGG 0.612550 8.2:+23400089 MS.gene72935:CDS
CTAAGCAATGAATTATGTAA+GGG 0.616973 8.2:+23400357 MS.gene72935:CDS
AGAATGGAATCAAATACTTG+AGG 0.627969 8.2:-23398775 None:intergenic
TGGAAATGTGTTTGGAGCTG+AGG 0.630627 8.2:+23398330 MS.gene72935:CDS
ACATAAATACCAAGGAAGTG+AGG 0.640425 8.2:+23397781 MS.gene72935:CDS
ACTCTGATAAACATGTGGGT+GGG 0.641286 8.2:+23400445 MS.gene72935:CDS
GAAGATGCTGATGGAATGAT+CGG 0.643450 8.2:+23398859 MS.gene72935:CDS
ACTGATGAGAGTGAAGATGA+TGG 0.645910 8.2:+23396071 MS.gene72935:CDS
ATTTAACTCTGATAAACATG+TGG 0.652790 8.2:+23400440 MS.gene72935:CDS
AGCACAATGAAAACAATGAG+GGG 0.654951 8.2:+23395854 None:intergenic
ATACAAGGAAGCAGTATCTG+AGG 0.660386 8.2:-23398674 None:intergenic
TGCTCAATACATAAATACCA+AGG 0.661086 8.2:+23397773 MS.gene72935:CDS
GTGGGTGGGAATACACAAGA+AGG 0.673551 8.2:+23400459 MS.gene72935:CDS
CAACCATTTCTTCATCACTG+TGG 0.674705 8.2:-23395997 None:intergenic
TTTAACTCTGATAAACATGT+GGG 0.674897 8.2:+23400441 MS.gene72935:CDS
AATGAGGGGAAAACGCTCAG+AGG 0.681871 8.2:+23395868 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAGATATATCATATT+TGG - chr8.2:23400198-23400217 None:intergenic 10.0%
!! TGTTAAATTCAATATAAAAA+AGG - chr8.2:23399050-23399069 None:intergenic 10.0%
!! TTAATGAAATTAATTGTAAT+TGG + chr8.2:23397862-23397881 MS.gene72935:intron 10.0%
!!! TTTTATATAGAACAAAATTA+AGG + chr8.2:23399175-23399194 MS.gene72935:intron 10.0%
!! AAATTATATGAACAACTAAA+AGG - chr8.2:23396136-23396155 None:intergenic 15.0%
!! AAATTGTTAGTATTATATTG+AGG + chr8.2:23396308-23396327 MS.gene72935:intron 15.0%
!! AATTGTTAGTATTATATTGA+GGG + chr8.2:23396309-23396328 MS.gene72935:intron 15.0%
!! ATTAATGAAACCAAATTATA+AGG - chr8.2:23395960-23395979 None:intergenic 15.0%
!! ATTAATTTCATATACTTTCT+CGG - chr8.2:23397602-23397621 None:intergenic 15.0%
!! CATTAATATCTTTATAGTTA+AGG - chr8.2:23397848-23397867 None:intergenic 15.0%
!! CTTATTTATTCATCTTAAAA+AGG + chr8.2:23396634-23396653 MS.gene72935:intron 15.0%
!!! CTTTTTAAGATGAATAAATA+AGG - chr8.2:23396636-23396655 None:intergenic 15.0%
!!! TATTTTGGATGTTTTTTAAT+TGG + chr8.2:23397047-23397066 MS.gene72935:intron 15.0%
!! AAAAATTGAACTTGAAATGT+AGG - chr8.2:23398242-23398261 None:intergenic 20.0%
!! AAAATTGAACTTGAAATGTA+GGG - chr8.2:23398241-23398260 None:intergenic 20.0%
!! AATTTCTATTCTATTCTATG+AGG + chr8.2:23395912-23395931 MS.gene72935:intron 20.0%
!! ATTACATAAATATGTGTATG+CGG - chr8.2:23396905-23396924 None:intergenic 20.0%
!! CATCAGATATTTACATTATT+GGG + chr8.2:23397979-23397998 MS.gene72935:CDS 20.0%
!! TACAGATGATAAGTAATTAA+AGG + chr8.2:23399876-23399895 MS.gene72935:intron 20.0%
!! TCAAATTATCCTTATTAGAA+TGG + chr8.2:23397414-23397433 MS.gene72935:intron 20.0%
!! TTAAATTCATACTTGTATGT+GGG - chr8.2:23400426-23400445 None:intergenic 20.0%
!! TTAACATTTGAATCTAAGTT+TGG - chr8.2:23400276-23400295 None:intergenic 20.0%
!! TTTGTTGAAACCTTATAATT+TGG + chr8.2:23395947-23395966 MS.gene72935:intron 20.0%
!!! ATTAAGCAGTTTTTAGATTT+AGG - chr8.2:23396989-23397008 None:intergenic 20.0%
!!! ATTGTAATTGGATAATTTTC+AGG + chr8.2:23397874-23397893 MS.gene72935:intron 20.0%
!!! GGGTATTTTTTTATAAACAT+GGG + chr8.2:23397238-23397257 MS.gene72935:intron 20.0%
!!! TATTTTGTTCAATTCTCTTT+CGG - chr8.2:23399229-23399248 None:intergenic 20.0%
!!! TCTTTTCATAGTTAAAATGT+GGG + chr8.2:23397159-23397178 MS.gene72935:intron 20.0%
!!! TGGGTATTTTTTTATAAACA+TGG + chr8.2:23397237-23397256 MS.gene72935:intron 20.0%
!!! TTGTAATTGGATAATTTTCA+GGG + chr8.2:23397875-23397894 MS.gene72935:intron 20.0%
!!! TTTTTTATAAACATGGGTAT+GGG + chr8.2:23397244-23397263 MS.gene72935:intron 20.0%
!!! TTTTTTTATAAACATGGGTA+TGG + chr8.2:23397243-23397262 MS.gene72935:intron 20.0%
! AAAGAAGAGTTTCTTCTAAT+TGG - chr8.2:23398457-23398476 None:intergenic 25.0%
! AACAAAATATTACTGATGCA+GGG + chr8.2:23399583-23399602 MS.gene72935:intron 25.0%
! AAGAACTCTAAACAAATCTT+CGG + chr8.2:23398390-23398409 MS.gene72935:CDS 25.0%
! AATTACCCACAAATTTAAGT+GGG + chr8.2:23396837-23396856 MS.gene72935:intron 25.0%
! AATTATCCTTATTAGAATGG+TGG + chr8.2:23397417-23397436 MS.gene72935:intron 25.0%
! ATAGTTAAAATGTGGGTAAT+GGG + chr8.2:23397166-23397185 MS.gene72935:intron 25.0%
! ATATGAACAACTAAAAGGAA+AGG - chr8.2:23396131-23396150 None:intergenic 25.0%
! ATCTTATAGATGATAGATCT+CGG + chr8.2:23399355-23399374 MS.gene72935:intron 25.0%
! ATCTTCAAACTATACTTGAT+TGG + chr8.2:23398584-23398603 MS.gene72935:CDS 25.0%
! ATGATCAAATAGACATTCTA+AGG - chr8.2:23397313-23397332 None:intergenic 25.0%
! ATGGTTGAATATAAAGCAAA+AGG + chr8.2:23396013-23396032 MS.gene72935:CDS 25.0%
! ATGTAATGATCTTGAAATTG+AGG + chr8.2:23397935-23397954 MS.gene72935:CDS 25.0%
! ATTGATGAGATATGAATAGA+AGG + chr8.2:23396187-23396206 MS.gene72935:intron 25.0%
! ATTTAACTCTGATAAACATG+TGG + chr8.2:23400440-23400459 MS.gene72935:CDS 25.0%
! CCAATAATGTAAATATCTGA+TGG - chr8.2:23397981-23398000 None:intergenic 25.0%
! CCATCAGATATTTACATTAT+TGG + chr8.2:23397978-23397997 MS.gene72935:CDS 25.0%
! CTAAGCAATGAATTATGTAA+GGG + chr8.2:23400357-23400376 MS.gene72935:CDS 25.0%
! GAAAGAGAATTGAACAAAAT+AGG + chr8.2:23399228-23399247 MS.gene72935:intron 25.0%
! GAATTATCGTATCAATATGT+CGG + chr8.2:23400085-23400104 MS.gene72935:CDS 25.0%
! GAGATTGAATTCATTCATTA+TGG - chr8.2:23399932-23399951 None:intergenic 25.0%
! GTGTATATTTAATGTCTTCA+AGG + chr8.2:23399088-23399107 MS.gene72935:intron 25.0%
! GTTAAATTCATACTTGTATG+TGG - chr8.2:23400427-23400446 None:intergenic 25.0%
! TAACAAAATATTACTGATGC+AGG + chr8.2:23399582-23399601 MS.gene72935:intron 25.0%
! TAATGTCTTCAAGGATATTA+AGG + chr8.2:23399097-23399116 MS.gene72935:intron 25.0%
! TAATTACCCACAAATTTAAG+TGG + chr8.2:23396836-23396855 MS.gene72935:intron 25.0%
! TCAATTTCAAGATCATTACA+TGG - chr8.2:23397936-23397955 None:intergenic 25.0%
! TCATAAAATAGTAAGAATCG+TGG - chr8.2:23397080-23397099 None:intergenic 25.0%
! TGTAATGATCTTGAAATTGA+GGG + chr8.2:23397936-23397955 MS.gene72935:CDS 25.0%
! TTACATAAATATGTGTATGC+GGG - chr8.2:23396904-23396923 None:intergenic 25.0%
! TTTAACTCTGATAAACATGT+GGG + chr8.2:23400441-23400460 MS.gene72935:CDS 25.0%
! TTTCATTTCAAAACCATACA+AGG - chr8.2:23398692-23398711 None:intergenic 25.0%
!! AAGGTACCATAAAATGTTTA+GGG + chr8.2:23399301-23399320 MS.gene72935:intron 25.0%
!! ATCATTGTGAATGAAGATTT+TGG + chr8.2:23400008-23400027 MS.gene72935:intron 25.0%
!! GATATATCTAATTTTCATCG+AGG + chr8.2:23400203-23400222 MS.gene72935:intron 25.0%
!! GTCTTTTCATAGTTAAAATG+TGG + chr8.2:23397158-23397177 MS.gene72935:intron 25.0%
!! TAATTTGGTTTCATTAATGC+AGG + chr8.2:23395962-23395981 MS.gene72935:intron 25.0%
!! TTCAATATAAAAAAGGTGCA+AGG - chr8.2:23399043-23399062 None:intergenic 25.0%
!! TTTTGTTACCACATATATGA+AGG - chr8.2:23399570-23399589 None:intergenic 25.0%
!!! AAAGGTACCATAAAATGTTT+AGG + chr8.2:23399300-23399319 MS.gene72935:intron 25.0%
!!! ACAGTTTTTTAGGGATATTT+TGG + chr8.2:23397032-23397051 MS.gene72935:intron 25.0%
!!! ATAAGTTTTAACAAACCTTG+AGG + chr8.2:23399131-23399150 MS.gene72935:intron 25.0%
!!! ATAATTTTCAGGGTAACAAT+TGG + chr8.2:23397885-23397904 MS.gene72935:intron 25.0%
!!! ATTGAAAGTGACTTGTTTTT+TGG - chr8.2:23396689-23396708 None:intergenic 25.0%
!!! CATTTTAACCTTCATATATG+TGG + chr8.2:23399559-23399578 MS.gene72935:intron 25.0%
AAAAAATATCCTCATTGGGT+AGG + chr8.2:23396786-23396805 MS.gene72935:intron 30.0%
AAAAAGCCACCATTCTAATA+AGG - chr8.2:23397426-23397445 None:intergenic 30.0%
AAAAATATCCTCATTGGGTA+GGG + chr8.2:23396787-23396806 MS.gene72935:intron 30.0%
AAAAGTTTACACCAAAGTTC+TGG + chr8.2:23398709-23398728 MS.gene72935:CDS 30.0%
AACTCAAATTTCCAGAACTT+TGG - chr8.2:23398723-23398742 None:intergenic 30.0%
AATCACATCCTAAGTATGTT+CGG + chr8.2:23398887-23398906 MS.gene72935:CDS 30.0%
ACAAAATATTACTGATGCAG+GGG + chr8.2:23399584-23399603 MS.gene72935:intron 30.0%
AGAATGGAATCAAATACTTG+AGG - chr8.2:23398778-23398797 None:intergenic 30.0%
AGACAATGCATAATATATGC+GGG + chr8.2:23396586-23396605 MS.gene72935:intron 30.0%
AGATGAATAAATAAGGTGTG+TGG - chr8.2:23396629-23396648 None:intergenic 30.0%
AGATTGATATACACTATCGA+TGG - chr8.2:23399471-23399490 None:intergenic 30.0%
AGGAATATATGTGTCTGTTT+GGG + chr8.2:23398930-23398949 MS.gene72935:CDS 30.0%
ATACACAAGAAGGTGAAAAA+AGG + chr8.2:23400469-23400488 MS.gene72935:CDS 30.0%
ATAGTAAACCAATCCCAAAA+TGG + chr8.2:23398353-23398372 MS.gene72935:CDS 30.0%
ATATGAATAGAAGGAAAGAG+AGG + chr8.2:23396196-23396215 MS.gene72935:intron 30.0%
ATGAATAAATAAGGTGTGTG+GGG - chr8.2:23396627-23396646 None:intergenic 30.0%
ATTATCCTTGACAATCATCT+TGG + chr8.2:23399819-23399838 MS.gene72935:intron 30.0%
CATAGTTAAAATGTGGGTAA+TGG + chr8.2:23397165-23397184 MS.gene72935:intron 30.0%
CATGACATGAAAGCTTATAA+AGG - chr8.2:23396394-23396413 None:intergenic 30.0%
CATTTGAAAGTTTCTCAAGT+TGG + chr8.2:23398982-23399001 MS.gene72935:CDS 30.0%
CCGTAAAAAATATCCTCATT+GGG + chr8.2:23396782-23396801 MS.gene72935:intron 30.0%
GAGACAATGCATAATATATG+CGG + chr8.2:23396585-23396604 MS.gene72935:intron 30.0%
GATGAATAAATAAGGTGTGT+GGG - chr8.2:23396628-23396647 None:intergenic 30.0%
GCTAAGCAATGAATTATGTA+AGG + chr8.2:23400356-23400375 MS.gene72935:intron 30.0%
TAAATTTGTGGGTAATTACC+CGG - chr8.2:23396834-23396853 None:intergenic 30.0%
TAGGAATATATGTGTCTGTT+TGG + chr8.2:23398929-23398948 MS.gene72935:CDS 30.0%
TAGTAAACCAATCCCAAAAT+GGG + chr8.2:23398354-23398373 MS.gene72935:CDS 30.0%
TAGTCTTCCAAAATTGACAT+GGG + chr8.2:23397517-23397536 MS.gene72935:intron 30.0%
TGCTCAATACATAAATACCA+AGG + chr8.2:23397773-23397792 MS.gene72935:CDS 30.0%
TTCACATCAAATGGTAACAA+AGG + chr8.2:23399282-23399301 MS.gene72935:intron 30.0%
! AACATCTCATTTCTTTTCCA+AGG - chr8.2:23397466-23397485 None:intergenic 30.0%
! AAGAGGGAGTATAAAATAGT+TGG - chr8.2:23396500-23396519 None:intergenic 30.0%
! AGAGGGAGTATAAAATAGTT+GGG - chr8.2:23396499-23396518 None:intergenic 30.0%
! CAAGTACCCTAAACATTTTA+TGG - chr8.2:23399310-23399329 None:intergenic 30.0%
! GCACTATAGCTTTTCTTTTT+AGG - chr8.2:23398424-23398443 None:intergenic 30.0%
! TAATGATTGCATCCCATTTT+GGG - chr8.2:23398369-23398388 None:intergenic 30.0%
! TCAAATAGACATTCTAAGGA+TGG - chr8.2:23397309-23397328 None:intergenic 30.0%
! TTAGTCTTCCAAAATTGACA+TGG + chr8.2:23397516-23397535 MS.gene72935:intron 30.0%
! TTGCTAACAGTCAAATTTTC+TGG + chr8.2:23400051-23400070 MS.gene72935:intron 30.0%
! TTTCATTAATGCAGGTGTTT+TGG + chr8.2:23395970-23395989 MS.gene72935:intron 30.0%
! TTTCGGTTTCATCCATTTTA+TGG - chr8.2:23399212-23399231 None:intergenic 30.0%
!! AATGAATCAACATGATGGAT+TGG - chr8.2:23398628-23398647 None:intergenic 30.0%
!! CTGGAAATTTGAGTTTGTTA+TGG + chr8.2:23398728-23398747 MS.gene72935:CDS 30.0%
!! GTCATGTTGATTCCATAAAA+TGG + chr8.2:23399197-23399216 MS.gene72935:intron 30.0%
!!! AACAGTCAAATTTTCTGGTT+CGG + chr8.2:23400056-23400075 MS.gene72935:intron 30.0%
!!! ACAATTGCTTTTTTCTGTTC+TGG - chr8.2:23396269-23396288 None:intergenic 30.0%
!!! ATAGCTTTTCTTTTTAGGTC+CGG - chr8.2:23398419-23398438 None:intergenic 30.0%
!!! CCAATGAGGATATTTTTTAC+GGG - chr8.2:23396784-23396803 None:intergenic 30.0%
!!! CCCAATGAGGATATTTTTTA+CGG - chr8.2:23396785-23396804 None:intergenic 30.0%
AAAACATAGCACAATCCTCA+AGG - chr8.2:23399149-23399168 None:intergenic 35.0%
AACACATTTCCAGCATTCAA+TGG - chr8.2:23398322-23398341 None:intergenic 35.0%
AATTCATACTTGTATGTGGG+TGG - chr8.2:23400423-23400442 None:intergenic 35.0%
AATTTACAAGTGTGACGAAG+AGG - chr8.2:23396517-23396536 None:intergenic 35.0%
ACAACCTCTTGAAAACTGAT+AGG - chr8.2:23398298-23398317 None:intergenic 35.0%
ACAACTAGAGAGCAATATGA+TGG - chr8.2:23396160-23396179 None:intergenic 35.0%
ACATAAATACCAAGGAAGTG+AGG + chr8.2:23397781-23397800 MS.gene72935:CDS 35.0%
AGCTAGTAGATCTAAAGAAG+TGG + chr8.2:23400123-23400142 MS.gene72935:CDS 35.0%
ATCCCTAAAAAACTGTACAC+AGG - chr8.2:23397028-23397047 None:intergenic 35.0%
ATGAAGCTGAAATTGTTCCT+TGG + chr8.2:23397446-23397465 MS.gene72935:intron 35.0%
ATGATCTTGAAATTGAGGGT+TGG + chr8.2:23397940-23397959 MS.gene72935:CDS 35.0%
ATGTAAGGGACATGTATTTG+AGG + chr8.2:23400371-23400390 MS.gene72935:CDS 35.0%
ATTCATACTTGTATGTGGGT+GGG - chr8.2:23400422-23400441 None:intergenic 35.0%
ATTGTTAGCAAGCAAATGGT+AGG + chr8.2:23398910-23398929 MS.gene72935:CDS 35.0%
ATTTACAAGTGTGACGAAGA+GGG - chr8.2:23396516-23396535 None:intergenic 35.0%
CAGGTGAGAAATATGAAACT+TGG + chr8.2:23400167-23400186 MS.gene72935:intron 35.0%
CATGTCAGATACATCAAGAA+TGG - chr8.2:23398794-23398813 None:intergenic 35.0%
CCATACCCACTTAAATTTGT+GGG - chr8.2:23396845-23396864 None:intergenic 35.0%
CCATTTGATGTGAAACTCAT+AGG - chr8.2:23399276-23399295 None:intergenic 35.0%
CCCGTAAAAAATATCCTCAT+TGG + chr8.2:23396781-23396800 MS.gene72935:intron 35.0%
CCTATGAGTTTCACATCAAA+TGG + chr8.2:23399273-23399292 MS.gene72935:intron 35.0%
CTAAAAAACTGTACACAGGA+GGG - chr8.2:23397024-23397043 None:intergenic 35.0%
CTAACAATCCGAACATACTT+AGG - chr8.2:23398898-23398917 None:intergenic 35.0%
GAAGCAATTAGAAATTCTCG+AGG - chr8.2:23400324-23400343 None:intergenic 35.0%
GACAATGCATAATATATGCG+GGG + chr8.2:23396587-23396606 MS.gene72935:intron 35.0%
GAGTATGACACTAAAGTTGT+TGG + chr8.2:23397192-23397211 MS.gene72935:intron 35.0%
GAGTTTCTTCTAATTGGAGA+AGG - chr8.2:23398451-23398470 None:intergenic 35.0%
GATTAACTGTTATCGTGATG+AGG + chr8.2:23397645-23397664 MS.gene72935:intron 35.0%
GTAAAGTAAACCAAAACAGC+TGG - chr8.2:23399797-23399816 None:intergenic 35.0%
GTTTATGATATCAGCGATGT+GGG - chr8.2:23398019-23398038 None:intergenic 35.0%
TATAAAATAGTTGGGAGGAG+TGG - chr8.2:23396491-23396510 None:intergenic 35.0%
TATCGTATCAATATGTCGGA+TGG + chr8.2:23400089-23400108 MS.gene72935:CDS 35.0%
TCAAGGATATTAAGGTAGCT+TGG + chr8.2:23399105-23399124 MS.gene72935:intron 35.0%
TCATATTGCTCTCTAGTTGT+TGG + chr8.2:23396160-23396179 MS.gene72935:intron 35.0%
TCCATACCCACTTAAATTTG+TGG - chr8.2:23396846-23396865 None:intergenic 35.0%
TCGGAAATGAATCAACATGA+TGG - chr8.2:23398633-23398652 None:intergenic 35.0%
TGTAAGGGACATGTATTTGA+GGG + chr8.2:23400372-23400391 MS.gene72935:CDS 35.0%
TGTTTATGATATCAGCGATG+TGG - chr8.2:23398020-23398039 None:intergenic 35.0%
TTAGAAATTCTCGAGGATCA+TGG - chr8.2:23400317-23400336 None:intergenic 35.0%
TTATAAACATGGGTATGGGA+AGG + chr8.2:23397248-23397267 MS.gene72935:intron 35.0%
TTCTTCTAATTGGAGAAGGA+GGG - chr8.2:23398447-23398466 None:intergenic 35.0%
TTGAATGCTGGAAATGTGTT+TGG + chr8.2:23398322-23398341 MS.gene72935:CDS 35.0%
TTTCTTCTAATTGGAGAAGG+AGG - chr8.2:23398448-23398467 None:intergenic 35.0%
! ACTTTGGAAACTCTAGACTT+AGG - chr8.2:23400229-23400248 None:intergenic 35.0%
! CTAATGATTGCATCCCATTT+TGG - chr8.2:23398370-23398389 None:intergenic 35.0%
! CTTAAAACGAGTGTCGTATA+GGG + chr8.2:23396729-23396748 MS.gene72935:intron 35.0%
! TAAGTCTAGAGTTTCCAAAG+TGG + chr8.2:23400228-23400247 MS.gene72935:intron 35.0%
! TCTTAAAACGAGTGTCGTAT+AGG + chr8.2:23396728-23396747 MS.gene72935:intron 35.0%
! TGATAGTGCTTTAGACAAGA+AGG + chr8.2:23398498-23398517 MS.gene72935:CDS 35.0%
! TTTGGAGTCTAGTAAACTAG+TGG - chr8.2:23396671-23396690 None:intergenic 35.0%
!! AAAGTTTCTCAAGTTGGTGT+TGG + chr8.2:23398988-23399007 MS.gene72935:CDS 35.0%
!! TCATGTGATGGAATTTTCTG+TGG - chr8.2:23399769-23399788 None:intergenic 35.0%
!! TGTTCCTATCAGTTTTCAAG+AGG + chr8.2:23398291-23398310 MS.gene72935:intron 35.0%
!! TTCAAAGCATTGACATAGTC+TGG - chr8.2:23396460-23396479 None:intergenic 35.0%
!!! ACAGTCAAATTTTCTGGTTC+GGG + chr8.2:23400057-23400076 MS.gene72935:intron 35.0%
!!! ATACGACACTCGTTTTAAGA+CGG - chr8.2:23396728-23396747 None:intergenic 35.0%
!!! CTCCTGTGTACAGTTTTTTA+GGG + chr8.2:23397023-23397042 MS.gene72935:intron 35.0%
!!! TAGCTTTTCTTTTTAGGTCC+GGG - chr8.2:23398418-23398437 None:intergenic 35.0%
!!! TATTTTTTACGGGTGTCCAT+CGG - chr8.2:23396774-23396793 None:intergenic 35.0%
AACTCTGATAAACATGTGGG+TGG + chr8.2:23400444-23400463 MS.gene72935:CDS 40.0%
AAGCTCCAAGATGATTGTCA+AGG - chr8.2:23399827-23399846 None:intergenic 40.0%
ACTCTGATAAACATGTGGGT+GGG + chr8.2:23400445-23400464 MS.gene72935:CDS 40.0%
ACTGATGAGAGTGAAGATGA+TGG + chr8.2:23396071-23396090 MS.gene72935:CDS 40.0%
ATAATATATGCGGGGAGTCA+GGG + chr8.2:23396595-23396614 MS.gene72935:intron 40.0%
ATACAAGGAAGCAGTATCTG+AGG - chr8.2:23398677-23398696 None:intergenic 40.0%
ATTGGATCTAACCGAAGTTC+AGG - chr8.2:23398610-23398629 None:intergenic 40.0%
ATTGGTACATGGAATGTTGC+TGG + chr8.2:23397903-23397922 MS.gene72935:CDS 40.0%
CAACCATTTCTTCATCACTG+TGG - chr8.2:23396000-23396019 None:intergenic 40.0%
CACTATAGTACCTTACCGAT+AGG + chr8.2:23397273-23397292 MS.gene72935:intron 40.0%
CATCCACAGTGATGAAGAAA+TGG + chr8.2:23395994-23396013 MS.gene72935:CDS 40.0%
CCCACAAATTTAAGTGGGTA+TGG + chr8.2:23396842-23396861 MS.gene72935:intron 40.0%
CCTAAAAAACTGTACACAGG+AGG - chr8.2:23397025-23397044 None:intergenic 40.0%
CCTTCTCTGTAAACTAAACC+AGG - chr8.2:23396348-23396367 None:intergenic 40.0%
CTAAACAAATCTTCGGAACC+CGG + chr8.2:23398397-23398416 MS.gene72935:CDS 40.0%
GAAGATGCTGATGGAATGAT+CGG + chr8.2:23398859-23398878 MS.gene72935:CDS 40.0%
GATGATAGATCTCGGTCATT+AGG + chr8.2:23399363-23399382 MS.gene72935:intron 40.0%
GCGAATAATGAAGATGCTGA+TGG + chr8.2:23398850-23398869 MS.gene72935:CDS 40.0%
GGGTACAAAGAAAGCTAAGA+AGG + chr8.2:23398950-23398969 MS.gene72935:CDS 40.0%
GTATTTGAGGGATGGAAAGA+GGG + chr8.2:23400384-23400403 MS.gene72935:CDS 40.0%
GTCGTATAGGGATGGTAATT+GGG + chr8.2:23396741-23396760 MS.gene72935:intron 40.0%
TATTTGAGGGATGGAAAGAG+GGG + chr8.2:23400385-23400404 MS.gene72935:CDS 40.0%
TCAGATACTGCTTCCTTGTA+TGG + chr8.2:23398676-23398695 MS.gene72935:CDS 40.0%
TCAGGGTAACAATTGGTACA+TGG + chr8.2:23397892-23397911 MS.gene72935:intron 40.0%
TCGGATTGTTAGCAAGCAAA+TGG + chr8.2:23398906-23398925 MS.gene72935:CDS 40.0%
TCTTCTAATTGGAGAAGGAG+GGG - chr8.2:23398446-23398465 None:intergenic 40.0%
TGTATTTGAGGGATGGAAAG+AGG + chr8.2:23400383-23400402 MS.gene72935:CDS 40.0%
TGTCGTATAGGGATGGTAAT+TGG + chr8.2:23396740-23396759 MS.gene72935:intron 40.0%
! AAATATGTGTATGCGGGTTG+CGG - chr8.2:23396898-23396917 None:intergenic 40.0%
! AGACATTCTAAGGATGGCAA+TGG - chr8.2:23397303-23397322 None:intergenic 40.0%
! CCTGGTTTAGTTTACAGAGA+AGG + chr8.2:23396345-23396364 MS.gene72935:intron 40.0%
! CGTTTCACCCATGTCAATTT+TGG - chr8.2:23397527-23397546 None:intergenic 40.0%
! CTTTGTACTCTGCGCATTTT+CGG - chr8.2:23398652-23398671 None:intergenic 40.0%
! GACATTCTAAGGATGGCAAT+GGG - chr8.2:23397302-23397321 None:intergenic 40.0%
! GGGAGTATAAAATAGTTGGG+AGG - chr8.2:23396496-23396515 None:intergenic 40.0%
!! AATAGAAGCATCTTTGCGCT+TGG + chr8.2:23398080-23398099 MS.gene72935:intron 40.0%
!! ATAGAAGCATCTTTGCGCTT+GGG + chr8.2:23398081-23398100 MS.gene72935:intron 40.0%
!! CAAGTTGGTGTTGGTCTTAT+GGG + chr8.2:23398997-23399016 MS.gene72935:CDS 40.0%
!! TACTTGATTGGCCTGAACTT+CGG + chr8.2:23398596-23398615 MS.gene72935:CDS 40.0%
!! TCAAGTTGGTGTTGGTCTTA+TGG + chr8.2:23398996-23399015 MS.gene72935:CDS 40.0%
!! TGGTTTGGTGGTGTTAGTTT+AGG - chr8.2:23397566-23397585 None:intergenic 40.0%
!!! ATTGCATCCCATTTTGGGAT+TGG - chr8.2:23398364-23398383 None:intergenic 40.0%
!!! CAGTCAAATTTTCTGGTTCG+GGG + chr8.2:23400058-23400077 MS.gene72935:intron 40.0%
!!! CCTCCTGTGTACAGTTTTTT+AGG + chr8.2:23397022-23397041 MS.gene72935:intron 40.0%
AAACCCTGCTTTCATGGATC+CGG + chr8.2:23396812-23396831 MS.gene72935:intron 45.0%
AAACTGTACACAGGAGGGAA+CGG - chr8.2:23397019-23397038 None:intergenic 45.0%
AATGTAGGGCTTTACCCCAA+AGG - chr8.2:23398227-23398246 None:intergenic 45.0%
AGCATCATACCTCACTTCCT+TGG - chr8.2:23397793-23397812 None:intergenic 45.0%
AGGATAAACCAAGGCCTAAG+AGG - chr8.2:23398176-23398195 None:intergenic 45.0%
AGGGACATGTATTTGAGGGA+TGG + chr8.2:23400376-23400395 MS.gene72935:CDS 45.0%
AGGGTAAAACCCTGCTTTCA+TGG + chr8.2:23396806-23396825 MS.gene72935:intron 45.0%
ATAAACCAAGGCCTAAGAGG+GGG - chr8.2:23398173-23398192 None:intergenic 45.0%
CAATGGGTATCCTATCGGTA+AGG - chr8.2:23397286-23397305 None:intergenic 45.0%
CATAATATATGCGGGGAGTC+AGG + chr8.2:23396594-23396613 MS.gene72935:intron 45.0%
CGAGCTCATGAAATTCGATC+AGG + chr8.2:23400148-23400167 MS.gene72935:CDS 45.0%
CTATTTCCAAACCCCCTCTT+AGG + chr8.2:23398159-23398178 MS.gene72935:intron 45.0%
CTTAGGCCTTGGTTTATCCT+TGG + chr8.2:23398176-23398195 MS.gene72935:intron 45.0%
CTTGCAAGTTGCAACCACTT+TGG - chr8.2:23400245-23400264 None:intergenic 45.0%
GAGGGTGATTCTAATTGTCC+TGG + chr8.2:23396327-23396346 MS.gene72935:intron 45.0%
GAGGTTGTTCCATTGAATGC+TGG + chr8.2:23398310-23398329 MS.gene72935:CDS 45.0%
GATAAACCAAGGCCTAAGAG+GGG - chr8.2:23398174-23398193 None:intergenic 45.0%
GATGGCAATGGGTATCCTAT+CGG - chr8.2:23397291-23397310 None:intergenic 45.0%
GGATAAACCAAGGCCTAAGA+GGG - chr8.2:23398175-23398194 None:intergenic 45.0%
GTTATGGAGCGAAAAGCAAC+AGG + chr8.2:23398744-23398763 MS.gene72935:CDS 45.0%
TTTCTGACCTGAAGCCAGAT+GGG - chr8.2:23399662-23399681 None:intergenic 45.0%
! AAACGAGTGTCGTATAGGGA+TGG + chr8.2:23396733-23396752 MS.gene72935:intron 45.0%
! AGCTAATGAGGTTCTAACCG+AGG + chr8.2:23398114-23398133 MS.gene72935:intron 45.0%
! ATTTCTGGAAGGGCTTCCTT+TGG + chr8.2:23398208-23398227 MS.gene72935:intron 45.0%
! CATGAGTAAGCCAGCTGTTT+TGG + chr8.2:23399784-23399803 MS.gene72935:intron 45.0%
! GCCTTCGAGAATTTCTGGAA+GGG + chr8.2:23398198-23398217 MS.gene72935:intron 45.0%
! TATGGGCTACATGGGAAACA+AGG + chr8.2:23399014-23399033 MS.gene72935:CDS 45.0%
! TGGAAATGTGTTTGGAGCTG+AGG + chr8.2:23398330-23398349 MS.gene72935:CDS 45.0%
! TTTCTGGAAGGGCTTCCTTT+GGG + chr8.2:23398209-23398228 MS.gene72935:intron 45.0%
!! GTGCTTTGTTTGTTCCCATC+TGG + chr8.2:23399645-23399664 MS.gene72935:CDS 45.0%
!! GTTGGTCTTATGGGCTACAT+GGG + chr8.2:23399006-23399025 MS.gene72935:CDS 45.0%
!! TAGAAGCATCTTTGCGCTTG+GGG + chr8.2:23398082-23398101 MS.gene72935:intron 45.0%
!! TGTTGGTCTTATGGGCTACA+TGG + chr8.2:23399005-23399024 MS.gene72935:CDS 45.0%
AACCCTGCTTTCATGGATCC+GGG + chr8.2:23396813-23396832 MS.gene72935:intron 50.0%
CACTAAAGTTGTTGGCCACG+AGG + chr8.2:23397200-23397219 MS.gene72935:intron 50.0%
CCAGAAATTCTCGAAGGCCA+AGG - chr8.2:23398196-23398215 None:intergenic 50.0%
CGAAGGCCAAGGATAAACCA+AGG - chr8.2:23398185-23398204 None:intergenic 50.0%
CTGGCTTCAGGTCAGAAAGA+TGG + chr8.2:23399664-23399683 MS.gene72935:CDS 50.0%
CTTTCTGACCTGAAGCCAGA+TGG - chr8.2:23399663-23399682 None:intergenic 50.0%
GCCCTTCCAGAAATTCTCGA+AGG - chr8.2:23398202-23398221 None:intergenic 50.0%
GTGAAACGAAACACGCTGCA+AGG + chr8.2:23397539-23397558 MS.gene72935:intron 50.0%
GTGGGTGGGAATACACAAGA+AGG + chr8.2:23400459-23400478 MS.gene72935:CDS 50.0%
TACCCGGATCCATGAAAGCA+GGG - chr8.2:23396818-23396837 None:intergenic 50.0%
TTACCCGGATCCATGAAAGC+AGG - chr8.2:23396819-23396838 None:intergenic 50.0%
! CAGCTGGCTTACTCATGTGA+TGG - chr8.2:23399781-23399800 None:intergenic 50.0%
! CCTTGGCCTTCGAGAATTTC+TGG + chr8.2:23398193-23398212 MS.gene72935:intron 50.0%
! GGCCTTCGAGAATTTCTGGA+AGG + chr8.2:23398197-23398216 MS.gene72935:intron 50.0%
! GGGTTTTACCCTACCCAATG+AGG - chr8.2:23396798-23396817 None:intergenic 50.0%
! GGTTAGTCGCACGTTTGGTT+TGG - chr8.2:23397581-23397600 None:intergenic 50.0%
! GTTTGTTCCCATCTGGCTTC+AGG + chr8.2:23399652-23399671 MS.gene72935:CDS 50.0%
! TTCTCGGTTAGTCGCACGTT+TGG - chr8.2:23397586-23397605 None:intergenic 50.0%
! TTCTGGAAGGGCTTCCTTTG+GGG + chr8.2:23398210-23398229 MS.gene72935:intron 50.0%
!! TAGTCGCACGTTTGGTTTGG+TGG - chr8.2:23397578-23397597 None:intergenic 50.0%
!!! CGACACTCGTTTTAAGACGG+AGG - chr8.2:23396725-23396744 None:intergenic 50.0%
AACCAGCAATAGACGCGCCT+CGG - chr8.2:23398134-23398153 None:intergenic 55.0%
ACGAGGATACGCGTTGGGTA+TGG + chr8.2:23397217-23397236 MS.gene72935:intron 55.0%
AGTGGGTATGGACGCGAGTA+AGG + chr8.2:23396854-23396873 MS.gene72935:intron 55.0%
ATACCCAACGCGTATCCTCG+TGG - chr8.2:23397218-23397237 None:intergenic 55.0%
CGAGGATACGCGTTGGGTAT+GGG + chr8.2:23397218-23397237 MS.gene72935:intron 55.0%
GGGCAATGACGCAGCTAATG+AGG + chr8.2:23398102-23398121 MS.gene72935:intron 55.0%
GTAATTGGGCCCAAGTCCGA+TGG + chr8.2:23396755-23396774 MS.gene72935:intron 55.0%
GTGGGTATGGACGCGAGTAA+GGG + chr8.2:23396855-23396874 MS.gene72935:intron 55.0%
TACGGGTGTCCATCGGACTT+GGG - chr8.2:23396767-23396786 None:intergenic 55.0%
TTACGGGTGTCCATCGGACT+TGG - chr8.2:23396768-23396787 None:intergenic 55.0%
AACCGAGGCGCGTCTATTGC+TGG + chr8.2:23398129-23398148 MS.gene72935:intron 60.0%
CCAAACCCCCTCTTAGGCCT+TGG + chr8.2:23398165-23398184 MS.gene72935:intron 60.0%
CCAAGGCCTAAGAGGGGGTT+TGG - chr8.2:23398168-23398187 None:intergenic 60.0%
TGGCCACGAGGATACGCGTT+GGG + chr8.2:23397212-23397231 MS.gene72935:intron 60.0%
TTGGCCACGAGGATACGCGT+TGG + chr8.2:23397211-23397230 MS.gene72935:intron 60.0%
! TGTATGCGGGTTGCGGAGCT+GGG - chr8.2:23396891-23396910 None:intergenic 60.0%
! GTGTATGCGGGTTGCGGAGC+TGG - chr8.2:23396892-23396911 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 23395869 23400505 23395869 ID=MS.gene72935
chr8.2 mRNA 23395869 23400505 23395869 ID=MS.gene72935.t1;Parent=MS.gene72935
chr8.2 exon 23395869 23395889 23395869 ID=MS.gene72935.t1.exon1;Parent=MS.gene72935.t1
chr8.2 CDS 23395869 23395889 23395869 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
chr8.2 exon 23395984 23396092 23395984 ID=MS.gene72935.t1.exon2;Parent=MS.gene72935.t1
chr8.2 CDS 23395984 23396092 23395984 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
chr8.2 exon 23397712 23397802 23397712 ID=MS.gene72935.t1.exon3;Parent=MS.gene72935.t1
chr8.2 CDS 23397712 23397802 23397712 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
chr8.2 exon 23397896 23398000 23397896 ID=MS.gene72935.t1.exon4;Parent=MS.gene72935.t1
chr8.2 CDS 23397896 23398000 23397896 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
chr8.2 exon 23398303 23399035 23398303 ID=MS.gene72935.t1.exon5;Parent=MS.gene72935.t1
chr8.2 CDS 23398303 23399035 23398303 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
chr8.2 exon 23399604 23399788 23399604 ID=MS.gene72935.t1.exon6;Parent=MS.gene72935.t1
chr8.2 CDS 23399604 23399788 23399604 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
chr8.2 exon 23400061 23400169 23400061 ID=MS.gene72935.t1.exon7;Parent=MS.gene72935.t1
chr8.2 CDS 23400061 23400169 23400061 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
chr8.2 exon 23400357 23400505 23400357 ID=MS.gene72935.t1.exon8;Parent=MS.gene72935.t1
chr8.2 CDS 23400357 23400505 23400357 ID=cds.MS.gene72935.t1;Parent=MS.gene72935.t1
Gene Sequence

>MS.gene72935

ATGAGGGGAAAACGCTCAGAGGTAAGCTTTAACATGCTTTGTAAATTTCTATTCTATTCTATGAGGATACATATATAATTTGTTGAAACCTTATAATTTGGTTTCATTAATGCAGGTGTTTTGGTCATCCACAGTGATGAAGAAATGGTTGAATATAAAGCAAAAGGTGTATGATTTTAGTGAAGATGAAGCTAACACTGAAACTGATGAGAGTGAAGATGATGGTGTGTGCTTCATTATGCACTATATATTCTTTTTTCCTTTCCTTTTAGTTGTTCATATAATTTGCCATCATATTGCTCTCTAGTTGTTGGTTTAATTGATGAGATATGAATAGAAGGAAAGAGAGGATATAGATATTTTAATTAAATATTCTCTTTTGATTAATATGAGTGAACCAGAACAGAAAAAAGCAATTGTTTACTAGTCTATTTTCTTTAAATTGTTAGTATTATATTGAGGGTGATTCTAATTGTCCTGGTTTAGTTTACAGAGAAGGATTTTCTAAATTAACTTTTTATACCTTTATAAGCTTTCATGTCATGCATTATGAGTATAGATTCATAAATTTGTTTGCTATATTGTGTTCCAGACTATGTCAATGCTTTGAATTAGTTTTCCACTCCTCCCAACTATTTTATACTCCCTCTTCGTCACACTTGTAAATTAAATATTTCTAAAAATAAACGTCACTTTGTACATTTGAGTTTAAGACAGAGACAATGCATAATATATGCGGGGAGTCAGGGTTTGAACCCCACACACCTTATTTATTCATCTTAAAAAGGTGAATTTCTAGCCACTAGTTTACTAGACTCCAAAAAACAAGTCACTTTCAATTTTCAATGAAATTCCTCCGTCTTAAAACGAGTGTCGTATAGGGATGGTAATTGGGCCCAAGTCCGATGGACACCCGTAAAAAATATCCTCATTGGGTAGGGTAAAACCCTGCTTTCATGGATCCGGGTAATTACCCACAAATTTAAGTGGGTATGGACGCGAGTAAGGGAATTATAATGCCCAGCTCCGCAACCCGCATACACATATTTATGTAATATGATAAATACTTTATTTATTTTTTGTGAACAATTAATTAATTTAGCTATTTAAACATAAACCTAAATCTAAAAACTGCTTAATACAGTAACCGTTCCCTCCTGTGTACAGTTTTTTAGGGATATTTTGGATGTTTTTTAATTGGTTGAATACCACGATTCTTACTATTTTATGAGTTGATTTAAAAAAAAAAATAAGATCATAGTTTTATTTCAATTGTGATGTTTTTTATTGTCTTTTCATAGTTAAAATGTGGGTAATGGGTGCGAGTATGACACTAAAGTTGTTGGCCACGAGGATACGCGTTGGGTATGGGTATTTTTTTATAAACATGGGTATGGGAAGGTGCACTATAGTACCTTACCGATAGGATACCCATTGCCATCCTTAGAATGTCTATTTGATCATTTCACACTTATTATTTTTTTTTTTTAACAATCATTTCATACGTATTATGAAAAGATGTTAAATGAGAGAGATAAGACTTTATCAAATTATCCTTATTAGAATGGTGGCTTTTTATGAAGCTGAAATTGTTCCTTGGAAAAGAAATGAGATGTTTTGAAGTTATGTTTTTTTTAATTAGTTAAATTAGTCTTCCAAAATTGACATGGGTGAAACGAAACACGCTGCAAGGTCCTAAACTAACACCACCAAACCAAACGTGCGACTAACCGAGAAAGTATATGAAATTAATATAACTGTTCTGTAAAATTAAATGATTAACTGTTATCGTGATGAGGTCATAGTTAAAATCGTTATATGTGTTTCAATATTTGTAATTCAGATACATCTTGTAAAGACTACGAGATGAAACAACACAGAAGAAGAAAATCAGAAACTTTGCGTGCTCAATACATAAATACCAAGGAAGTGAGGTATGATGCTAATATTATTGTTATTATTATCATGTGACATGTCCTTAACTATAAAGATATTAATGAAATTAATTGTAATTGGATAATTTTCAGGGTAACAATTGGTACATGGAATGTTGCTGGAAAACATCCATGTAATGATCTTGAAATTGAGGGTTGGCTTTGTACTGAAGAACCATCAGATATTTACATTATTGGGTTAGTATGTGATGTCCCACATCGCTGATATCATAAACAACATATGTTTCAAACTATTATAAAAAGCTGAGTTTGATACAATAGAAGCATCTTTGCGCTTGGGGCAATGACGCAGCTAATGAGGTTCTAACCGAGGCGCGTCTATTGCTGGTTGAAAACTATTTCCAAACCCCCTCTTAGGCCTTGGTTTATCCTTGGCCTTCGAGAATTTCTGGAAGGGCTTCCTTTGGGGTAAAGCCCTACATTTCAAGTTCAATTTTTTAAATTTGTTTTAATTCATTCTTATGTGTTGTTCCTATCAGTTTTCAAGAGGTTGTTCCATTGAATGCTGGAAATGTGTTTGGAGCTGAGGATAGTAAACCAATCCCAAAATGGGATGCAATCATTAGAAGAACTCTAAACAAATCTTCGGAACCCGGACCTAAAAAGAAAAGCTATAGTGCCCCTCCTTCTCCAATTAGAAGAAACTCTTCTTTTAATACACAAATTAATCTACTTGATAGTGCTTTAGACAAGAAGGAAGAAATAAAAAGCATAATTTCTATAGAAAAGAATCTTCAATTGAGTAAAATATATGACATTGATCTTCAAACTATACTTGATTGGCCTGAACTTCGGTTAGATCCAATCCATCATGTTGATTCATTTCCGAAAATGCGCAGAGTACAAAGCACCTCAGATACTGCTTCCTTGTATGGTTTTGAAATGAAAAGTTTACACCAAAGTTCTGGAAATTTGAGTTTGTTATGGAGCGAAAAGCAACAGGAAATAGTGCCTCAAGTATTTGATTCCATTCTTGATGTATCTGACATGTTAACTGATGAAGAAAATGATACTTTCTCTGAATTAGCGAATAATGAAGATGCTGATGGAATGATCGGTGTGAAATCACATCCTAAGTATGTTCGGATTGTTAGCAAGCAAATGGTAGGAATATATGTGTCTGTTTGGGTACAAAGAAAGCTAAGAAGGCATGTTCATCATTTGAAAGTTTCTCAAGTTGGTGTTGGTCTTATGGGCTACATGGGAAACAAGGTAACCTTGCACCTTTTTTATATTGAATTTAACATTATTTATCATAGTATACGTGTATATTTAATGTCTTCAAGGATATTAAGGTAGCTTGGTACATAAGTTTTAACAAACCTTGAGGATTGTGCTATGTTTTGTGCATTTTTATATAGAACAAAATTAAGGTCATGTTGATTCCATAAAATGGATGAAACCGAAAGAGAATTGAACAAAATAGGTTTGTTCATGTGTTATGTGCTACCTATGAGTTTCACATCAAATGGTAACAAAGGTACCATAAAATGTTTAGGGTACTTGTTCACAAATTGCATCTGATCAAAATATCTTATAGATGATAGATCTCGGTCATTAGGTTAAGATTGTATATCTCATATTTGATTCACTAAATAAGATTTTCAAATACAAATCATTTGATCTTGATTCAAAGACTAAAATCCATCGATAGTGTATATCAATCTGCAATTTTATATGTTGATCATAAGAAGACTCGTTATATGTGTGCATTTATTTATAGTATTAACATGCTCATTTTAACCTTCATATATGTGGTAACAAAATATTACTGATGCAGGGGTCTGTTTCAGTTAGCATGTCTGTTTTTCAGTCACGTATGTGCTTTGTTTGTTCCCATCTGGCTTCAGGTCAGAAAGATGGAGCTGAACAAAGACGAAACTCAGATGTTCATGAAATTCTACAACGCACTCGTTTCTCATCAGTCTTTGATACAGATCAACCACAGAAAATTCCATCACATGAGTAAGCCAGCTGTTTTGGTTTACTTTACAAATTATCCTTGACAATCATCTTGGAGCTTAACAAAAGCAAATAACTTTTAGAAAAATGTACAGATGATAAGTAATTAAAGGATTGTGATTTTCAAACATTTTGATAAACAACCATAATGAATGAATTCAATCTCGATCGCAAGTTGCATGTTCACTTAATTTTATCTTTTTTATTAAGATATATTTGCTTATCATTGTGAATGAAGATTTTGGATTCATTTATGACTTGCTTTTTGCTAACAGTCAAATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTCGGATGGTGAGATTCGAAAGCTAGTAGATCTAAAGAAGTGGAACGAGCTCATGAAATTCGATCAGGTGAGAAATATGAAACTTGGAGTCTCCAAATATGATATATCTAATTTTCATCGAGGCCTAAGTCTAGAGTTTCCAAAGTGGTTGCAACTTGCAAGTGTTAATACCAAACTTAGATTCAAATGTTAATCTACATATAATTGTTTTCCATGATCCTCGAGAATTTCTAATTGCTTCACTTAATTTGCAGCTAAGCAATGAATTATGTAAGGGACATGTATTTGAGGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACATACAAGTATGAATTTAACTCTGATAAACATGTGGGTGGGAATACACAAGAAGGTGAAAAAAGGAGAGCTCCAGCATG
Protein sequence

>MS.gene72935.t1

MRGKRSEVFWSSTVMKKWLNIKQKVYDFSEDEANTETDESEDDDTSCKDYEMKQHRRRKSETLRAQYINTKEVRVTIGTWNVAGKHPCNDLEIEGWLCTEEPSDIYIIGFQEVVPLNAGNVFGAEDSKPIPKWDAIIRRTLNKSSEPGPKKKSYSAPPSPIRRNSSFNTQINLLDSALDKKEEIKSIISIEKNLQLSKIYDIDLQTILDWPELRLDPIHHVDSFPKMRRVQSTSDTASLYGFEMKSLHQSSGNLSLLWSEKQQEIVPQVFDSILDVSDMLTDEENDTFSELANNEDADGMIGVKSHPKYVRIVSKQMVGIYVSVWVQRKLRRHVHHLKVSQVGVGLMGYMGNKGSVSVSMSVFQSRMCFVCSHLASGQKDGAEQRRNSDVHEILQRTRFSSVFDTDQPQKIPSHDQIFWFGDLNYRINMSDGEIRKLVDLKKWNELMKFDQLSNELCKGHVFEGWKEGLINFPPTYKYEFNSDKHVGGNTQEGEKRRAPA