AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73111

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73111.t1 MTR_3g053980 93.047 489 31 1 1 489 1 486 0.0 848
MS.gene73111.t1 MTR_3g053710 70.791 493 110 6 5 489 1 467 0.0 636
MS.gene73111.t1 MTR_2g028190 40.920 413 218 10 88 489 55 452 3.32e-93 290
MS.gene73111.t1 MTR_4g007740 36.145 498 287 12 1 488 1 477 4.71e-90 283
MS.gene73111.t1 MTR_7g117430 38.369 417 231 11 85 489 83 485 2.88e-75 245
MS.gene73111.t1 MTR_1g115210 40.833 360 194 8 137 488 138 486 4.14e-74 242
MS.gene73111.t1 MTR_1g039270 40.833 360 195 9 137 488 120 469 8.41e-71 233
MS.gene73111.t1 MTR_1g111350 36.118 407 220 10 89 488 94 467 1.80e-66 221
MS.gene73111.t1 MTR_6g085010 35.802 405 238 8 89 488 104 491 3.50e-60 205
MS.gene73111.t1 MTR_3g097150 39.344 366 185 14 142 488 99 446 1.19e-59 203
MS.gene73111.t1 MTR_3g046300 33.781 447 251 12 82 489 19 459 5.20e-59 201
MS.gene73111.t1 MTR_5g091130 32.379 454 258 13 78 488 106 553 1.33e-53 189
MS.gene73111.t1 MTR_8g103880 30.919 359 216 9 132 476 103 443 5.29e-45 164
MS.gene73111.t1 MTR_1g037630 31.066 441 251 18 60 488 29 428 2.60e-43 159
MS.gene73111.t1 MTR_0036s0110 29.148 446 262 15 61 488 31 440 6.32e-43 158
MS.gene73111.t1 MTR_8g039540 30.700 443 251 18 60 488 33 433 1.68e-41 154
MS.gene73111.t1 MTR_3g014290 31.738 397 233 16 104 488 46 416 3.96e-41 152
MS.gene73111.t1 MTR_5g044770 32.796 372 220 14 131 488 73 428 1.22e-40 151
MS.gene73111.t1 MTR_5g080890 33.149 362 210 12 144 488 85 431 2.09e-40 150
MS.gene73111.t1 MTR_0036s0070 30.340 412 258 13 87 488 32 424 3.02e-40 150
MS.gene73111.t1 MTR_5g080960 32.873 362 211 12 144 488 85 431 2.63e-39 148
MS.gene73111.t1 MTR_0036s0050 30.310 419 258 13 87 488 32 433 7.74e-39 146
MS.gene73111.t1 MTR_2g067830 33.242 364 209 15 144 488 56 404 2.06e-38 145
MS.gene73111.t1 MTR_8g096990 31.148 366 226 12 136 488 77 429 3.83e-37 142
MS.gene73111.t1 MTR_2g059460 30.163 368 209 15 146 488 60 404 4.57e-37 141
MS.gene73111.t1 MTR_2g059490 29.798 396 229 17 119 488 36 408 6.90e-37 141
MS.gene73111.t1 MTR_8g038280 31.565 377 223 13 131 488 73 433 2.19e-36 140
MS.gene73111.t1 MTR_4g056420 29.676 401 245 14 116 488 45 436 7.09e-36 139
MS.gene73111.t1 MTR_2g063110 28.054 442 255 14 107 489 72 509 7.88e-36 139
MS.gene73111.t1 MTR_2g105300 32.011 378 219 17 126 483 18 377 1.90e-35 136
MS.gene73111.t1 MTR_6g090290 31.956 363 216 10 144 488 85 434 3.62e-34 134
MS.gene73111.t1 MTR_3g028120 28.700 446 263 14 61 488 28 436 1.24e-33 132
MS.gene73111.t1 MTR_5g008110 29.700 367 217 16 144 488 66 413 2.66e-33 130
MS.gene73111.t1 MTR_5g008150 30.163 368 215 15 144 488 62 410 6.55e-33 129
MS.gene73111.t1 MTR_5g038360 29.917 361 231 13 140 488 84 434 5.92e-32 127
MS.gene73111.t1 MTR_1g078240 29.255 376 223 13 143 488 67 429 6.45e-32 128
MS.gene73111.t1 MTR_1g078240 29.551 379 219 15 143 488 67 430 3.13e-31 126
MS.gene73111.t1 MTR_8g038310 30.769 364 195 14 144 488 86 411 7.77e-31 124
MS.gene73111.t1 MTR_5g008070 29.945 364 219 13 143 488 79 424 1.00e-30 124
MS.gene73111.t1 MTR_3g100500 28.571 441 267 19 70 489 25 438 8.93e-30 121
MS.gene73111.t1 MTR_6g088760 30.330 333 202 11 143 456 86 407 1.04e-29 122
MS.gene73111.t1 MTR_4g095270 26.196 397 246 16 116 488 50 423 1.87e-29 122
MS.gene73111.t1 MTR_4g095270 26.196 397 246 16 116 488 50 423 2.72e-29 122
MS.gene73111.t1 MTR_8g038250 30.328 366 197 14 144 488 85 413 5.08e-29 119
MS.gene73111.t1 MTR_0024s0040 27.803 446 265 15 62 488 1 408 5.13e-29 119
MS.gene73111.t1 MTR_4g045857 32.056 287 160 11 108 377 25 293 5.19e-29 116
MS.gene73111.t1 MTR_5g044570 26.457 446 266 11 51 488 18 409 6.95e-29 118
MS.gene73111.t1 MTR_1g060750 29.863 365 212 12 136 488 42 374 1.02e-28 117
MS.gene73111.t1 MTR_4g109760 31.316 380 224 14 126 488 37 396 1.74e-28 117
MS.gene73111.t1 MTR_1g078240 34.340 265 140 10 143 383 67 321 2.20e-28 116
MS.gene73111.t1 MTR_5g016260 27.717 368 228 14 140 488 83 431 6.89e-28 117
MS.gene73111.t1 MTR_2g084550 29.032 372 227 11 144 488 76 437 1.10e-27 116
MS.gene73111.t1 MTR_5g016260 27.717 368 228 14 140 488 83 431 1.48e-27 116
MS.gene73111.t1 MTR_2g055840 29.167 360 214 15 146 476 14 361 4.57e-27 112
MS.gene73111.t1 MTR_7g102750 27.297 370 235 12 144 488 80 440 1.55e-26 112
MS.gene73111.t1 MTR_1g061940 26.842 380 236 12 139 488 77 444 1.14e-25 110
MS.gene73111.t1 MTR_7g105850 27.119 413 246 17 119 489 67 466 1.90e-25 109
MS.gene73111.t1 MTR_7g021510 27.249 378 227 15 144 488 71 433 2.74e-25 108
MS.gene73111.t1 MTR_2g070430 28.647 377 220 13 143 483 85 448 3.28e-24 105
MS.gene73111.t1 MTR_7g102750 28.479 309 192 10 144 430 80 381 4.97e-24 104
MS.gene73111.t1 MTR_3g068000 26.601 406 233 17 130 489 56 442 7.23e-24 104
MS.gene73111.t1 MTR_7g062360 27.704 379 223 16 148 489 62 426 9.15e-24 103
MS.gene73111.t1 MTR_5g077850 26.542 373 223 12 148 488 84 437 1.09e-22 100
MS.gene73111.t1 MTR_3g065160 27.913 369 211 15 152 488 81 426 1.69e-22 100
MS.gene73111.t1 MTR_4g100990 26.619 417 232 17 133 488 67 470 2.26e-22 100
MS.gene73111.t1 MTR_8g075090 27.049 366 227 15 146 489 113 460 2.73e-22 99.8
MS.gene73111.t1 MTR_6g084710 26.263 396 254 14 120 488 166 550 2.78e-22 100
MS.gene73111.t1 MTR_7g080230 27.056 377 229 15 143 488 69 430 8.48e-22 98.6
MS.gene73111.t1 MTR_8g075090 27.123 365 226 16 146 488 113 459 9.28e-22 98.6
MS.gene73111.t1 MTR_5g022880 26.862 376 215 14 146 488 113 461 1.23e-21 98.2
MS.gene73111.t1 MTR_6g084710 28.114 281 182 8 120 389 166 437 2.91e-20 94.0
MS.gene73111.t1 MTR_8g075010 26.630 368 226 14 146 488 101 449 6.44e-20 93.2
MS.gene73111.t1 MTR_8g075090 28.846 312 183 14 146 435 113 407 6.50e-20 92.8
MS.gene73111.t1 MTR_8g094590 25.464 377 239 15 138 489 66 425 1.43e-19 91.3
MS.gene73111.t1 MTR_3g096930 24.468 376 241 15 138 488 77 434 5.13e-17 83.6
MS.gene73111.t1 MTR_8g094590 26.190 336 208 14 138 450 66 384 5.57e-17 83.2
MS.gene73111.t1 MTR_4g023650 25.062 403 243 20 124 489 40 420 6.93e-17 83.2
MS.gene73111.t1 MTR_5g012490 24.582 419 241 16 131 488 65 469 1.06e-16 82.8
MS.gene73111.t1 MTR_2g022320 26.234 385 224 16 146 485 37 406 1.92e-16 81.6
MS.gene73111.t1 MTR_2g022380 25.393 382 213 14 155 485 50 410 5.78e-16 80.5
MS.gene73111.t1 MTR_4g023630 24.876 402 245 20 124 489 40 420 1.76e-15 79.0
MS.gene73111.t1 MTR_1g029810 26.190 378 236 15 138 489 50 410 3.40e-15 77.8
MS.gene73111.t1 MTR_1g029810 26.190 378 236 15 138 489 50 410 4.17e-15 77.8
MS.gene73111.t1 MTR_3g087780 23.319 476 294 18 47 489 14 451 4.29e-15 78.2
MS.gene73111.t1 MTR_3g089400 77.083 48 8 1 54 98 286 333 6.45e-15 77.4
MS.gene73111.t1 MTR_2g022480 24.507 355 213 13 146 460 50 389 7.37e-15 77.0
MS.gene73111.t1 MTR_2g022370 25.397 378 214 14 155 485 50 406 1.41e-14 76.3
MS.gene73111.t1 MTR_5g077920 26.301 365 236 13 148 488 71 426 1.50e-14 75.9
MS.gene73111.t1 MTR_8g094590 27.237 257 159 10 138 383 66 305 1.96e-14 74.3
MS.gene73111.t1 MTR_2g022490 24.507 355 213 14 146 460 44 383 6.42e-13 70.9
MS.gene73111.t1 MTR_1g072450 23.445 418 255 17 115 485 17 416 5.16e-12 68.2
MS.gene73111.t1 MTR_5g008090 25.079 315 198 13 202 488 8 312 7.25e-12 66.6
MS.gene73111.t1 MTR_4g117090 24.390 410 220 17 146 485 50 439 2.79e-11 65.9
MS.gene73111.t1 MTR_2g022450 21.684 392 243 15 142 485 37 412 6.67e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73111.t1 AT5G10770 58.945 436 162 4 54 488 54 473 0.0 522
MS.gene73111.t1 AT5G10760 47.368 437 199 8 54 488 57 464 3.44e-124 370
MS.gene73111.t1 AT1G79720 40.602 399 211 11 108 489 94 483 1.14e-78 254
MS.gene73111.t1 AT1G01300 38.278 418 231 11 89 488 76 484 4.56e-75 244
MS.gene73111.t1 AT3G61820 42.192 365 191 8 137 488 126 483 1.42e-73 240
MS.gene73111.t1 AT1G25510 37.530 413 223 11 89 488 93 483 5.18e-68 226
MS.gene73111.t1 AT3G18490 35.941 409 239 10 89 488 106 500 5.01e-66 221
MS.gene73111.t1 AT3G20015 34.848 462 262 15 38 488 37 470 2.44e-65 218
MS.gene73111.t1 AT2G03200 35.829 374 195 13 142 488 103 458 1.43e-55 192
MS.gene73111.t1 AT3G59080 33.025 433 249 13 91 488 106 532 4.71e-52 184
MS.gene73111.t1 AT2G42980 32.594 451 240 16 84 488 92 524 5.26e-52 184
MS.gene73111.t1 AT3G54400 31.207 439 245 19 62 488 31 424 1.53e-48 172
MS.gene73111.t1 AT1G09750 30.667 375 234 13 129 489 87 449 3.37e-44 161
MS.gene73111.t1 AT1G64830 30.660 424 248 14 87 488 29 428 1.28e-43 159
MS.gene73111.t1 AT3G25700 30.390 385 231 13 134 488 72 449 2.58e-42 156
MS.gene73111.t1 AT5G33340 33.425 362 213 12 142 488 86 434 8.81e-42 155
MS.gene73111.t1 AT3G12700 28.438 429 282 11 81 488 36 460 8.22e-41 152
MS.gene73111.t1 AT5G07030 31.169 462 241 23 53 488 44 454 3.23e-40 150
MS.gene73111.t1 AT3G59080 30.023 433 226 13 91 488 106 496 4.43e-39 148
MS.gene73111.t1 AT2G35615 28.638 426 266 14 89 488 30 443 2.01e-38 145
MS.gene73111.t1 AT1G31450 27.862 463 270 16 50 488 19 441 1.37e-36 140
MS.gene73111.t1 AT1G65240 28.109 402 251 14 111 488 39 426 6.36e-34 134
MS.gene73111.t1 AT2G28040 30.056 356 208 13 145 488 55 381 1.35e-33 131
MS.gene73111.t1 AT2G28010 27.202 386 241 12 115 488 34 391 1.65e-33 131
MS.gene73111.t1 AT2G28040 30.056 356 208 13 145 488 64 390 2.25e-33 130
MS.gene73111.t1 AT4G30040 30.110 362 210 11 146 483 85 427 2.79e-33 131
MS.gene73111.t1 AT3G02740 27.807 374 224 15 144 488 83 439 2.46e-32 129
MS.gene73111.t1 AT3G02740 27.688 372 223 15 146 488 10 364 3.93e-32 127
MS.gene73111.t1 AT4G30030 31.507 365 207 16 146 489 78 420 1.14e-31 126
MS.gene73111.t1 AT5G22850 28.108 370 233 11 144 488 79 440 7.71e-31 125
MS.gene73111.t1 AT5G43100 27.957 372 221 15 140 488 70 417 3.97e-30 123
MS.gene73111.t1 AT5G43100 27.957 372 221 15 140 488 70 417 4.37e-30 124
MS.gene73111.t1 AT2G28030 28.451 355 214 12 146 488 61 387 5.48e-30 121
MS.gene73111.t1 AT2G23945 26.269 453 279 16 59 488 28 448 3.60e-29 120
MS.gene73111.t1 AT2G28225 28.809 361 209 14 146 488 67 397 3.82e-29 119
MS.gene73111.t1 AT1G08210 27.642 369 233 12 144 488 130 488 1.25e-28 119
MS.gene73111.t1 AT1G08210 27.642 369 233 12 144 488 82 440 1.49e-28 118
MS.gene73111.t1 AT1G08210 27.642 369 233 12 144 488 116 474 1.56e-28 119
MS.gene73111.t1 AT3G50050 28.109 402 239 17 117 488 55 436 3.45e-27 115
MS.gene73111.t1 AT2G28220 28.532 361 210 14 146 488 67 397 4.18e-27 113
MS.gene73111.t1 AT2G36670 26.613 372 234 12 144 488 98 457 1.39e-25 110
MS.gene73111.t1 AT2G36670 26.216 370 234 12 146 488 34 391 2.06e-25 108
MS.gene73111.t1 AT2G36670 26.216 370 234 12 146 488 34 391 2.06e-25 108
MS.gene73111.t1 AT3G42550 25.799 407 236 18 102 488 29 389 2.13e-25 108
MS.gene73111.t1 AT2G36670 26.486 370 233 12 146 488 105 462 3.16e-25 108
MS.gene73111.t1 AT5G36260 24.661 442 256 17 77 488 39 433 6.00e-25 107
MS.gene73111.t1 AT1G08210 27.812 320 201 10 144 442 82 392 1.81e-24 107
MS.gene73111.t1 AT1G05840 27.321 377 226 15 144 488 78 438 2.32e-24 106
MS.gene73111.t1 AT5G02190 28.342 374 217 16 155 489 82 443 6.96e-24 104
MS.gene73111.t1 AT1G66180 27.200 375 217 14 148 488 74 426 8.97e-24 103
MS.gene73111.t1 AT5G45120 26.667 405 226 20 146 488 83 478 9.12e-24 104
MS.gene73111.t1 AT5G37540 25.120 418 259 13 109 489 39 439 1.58e-23 103
MS.gene73111.t1 AT3G52500 27.949 390 226 17 144 488 88 467 6.98e-23 101
MS.gene73111.t1 AT2G39710 26.064 376 227 17 148 486 67 428 3.06e-22 99.4
MS.gene73111.t1 AT3G51350 27.937 315 184 14 146 435 102 398 1.22e-20 95.5
MS.gene73111.t1 AT1G49050 23.235 439 288 18 85 488 144 568 5.69e-20 93.6
MS.gene73111.t1 AT4G35880 27.066 351 216 15 146 475 107 438 1.18e-19 92.4
MS.gene73111.t1 AT1G49050 25.478 314 209 12 85 383 144 447 2.79e-19 90.9
MS.gene73111.t1 AT4G35880 27.476 313 191 13 146 438 107 403 4.23e-19 90.1
MS.gene73111.t1 AT2G17760 27.371 369 219 17 146 488 104 449 5.48e-19 90.1
MS.gene73111.t1 AT1G49050 23.262 374 248 15 146 488 30 395 3.40e-18 87.0
MS.gene73111.t1 AT3G51340 27.063 303 181 13 146 426 103 387 8.36e-18 85.9
MS.gene73111.t1 AT1G77480 25.666 413 246 20 113 489 33 420 1.02e-17 85.9
MS.gene73111.t1 AT1G77480 25.485 412 248 20 113 489 33 420 1.03e-17 85.9
MS.gene73111.t1 AT3G51340 27.063 303 181 13 146 426 103 387 1.15e-17 86.3
MS.gene73111.t1 AT4G12920 22.973 370 254 11 129 489 41 388 3.53e-17 84.0
MS.gene73111.t1 AT3G51340 26.573 286 172 12 146 409 103 372 2.32e-16 82.0
MS.gene73111.t1 AT3G51340 26.573 286 172 12 146 409 103 372 2.86e-16 80.9
MS.gene73111.t1 AT4G33490 25.984 381 233 20 138 489 52 412 2.90e-16 81.3
MS.gene73111.t1 AT1G44130 27.000 400 230 20 125 489 28 400 3.54e-16 80.9
MS.gene73111.t1 AT3G51360 26.722 363 230 14 146 488 89 435 7.61e-16 80.5
MS.gene73111.t1 AT3G51360 26.446 363 231 14 146 488 99 445 7.64e-16 80.5
MS.gene73111.t1 AT3G51360 26.446 363 231 13 146 488 5 351 1.17e-15 79.3
MS.gene73111.t1 AT3G51330 24.054 370 238 14 146 489 102 454 3.05e-15 78.2
MS.gene73111.t1 AT3G51330 24.119 369 237 14 146 488 102 453 3.80e-15 78.2
MS.gene73111.t1 AT4G33490 28.727 275 165 14 138 399 49 305 5.08e-15 77.4
MS.gene73111.t1 AT3G25700 32.847 137 85 3 134 264 72 207 1.57e-14 75.5
MS.gene73111.t1 AT3G51330 24.841 314 196 12 146 435 102 399 1.62e-14 76.3

Find 123 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAATTTGGAGGGATTTA+TGG 0.093359 3.4:+50685465 MS.gene73111:CDS
GCCAAATCTGGTAGCCTTAT+TGG 0.187292 3.4:+50685541 MS.gene73111:CDS
ATCTAAGAATAATATTAATT+TGG 0.227900 3.4:+50685453 MS.gene73111:CDS
ATTCTTAGATGATAATAATT+TGG 0.231434 3.4:-50685440 None:intergenic
GATAGTGATATTACTATCTT+TGG 0.232623 3.4:+50686831 MS.gene73111:CDS
TCCAATAAGGCTACCAGATT+TGG 0.281006 3.4:-50685542 None:intergenic
CTAGGAAGAAATGAGAAATT+TGG 0.285058 3.4:-50681642 None:intergenic
AGGGCTTGGTACTCCTAAAA+AGG 0.303517 3.4:+50685588 MS.gene73111:CDS
CAAGACAACGAAGGTCTATT+TGG 0.320960 3.4:+50686258 MS.gene73111:CDS
GTATCAAATGCATGTGTATA+TGG 0.322687 3.4:+50686132 MS.gene73111:CDS
CCATGTTCCCAACTGAATAA+TGG 0.341614 3.4:+50685346 MS.gene73111:CDS
ATTGAAACCGCTGGAGCAAC+TGG 0.345160 3.4:-50686648 None:intergenic
GGCGGCTCAGCCGGCCTATT+AGG 0.354696 3.4:+50686279 MS.gene73111:CDS
GGTTCCACCAACGCTGATTC+CGG 0.355405 3.4:-50686493 None:intergenic
CTTCGTCATGCCTTTCTTGA+AGG 0.357836 3.4:-50686622 None:intergenic
GATGACGACCAAGGCCTAAT+AGG 0.364966 3.4:-50686293 None:intergenic
GGCGTTGGCCACCTTACATT+TGG 0.366609 3.4:+50686390 MS.gene73111:CDS
AATAGTTCCCTGATCCAATA+AGG 0.375683 3.4:-50685555 None:intergenic
TAATAAGAAGTAGACTTTGA+TGG 0.377497 3.4:-50685709 None:intergenic
GAGTTTGAAGCAAGCTTGTT+TGG 0.377510 3.4:+50686788 MS.gene73111:CDS
GATGTTGGTGCTGGTAAGAT+TGG 0.381169 3.4:+50686888 MS.gene73111:CDS
AGAAGGATTGGTCACCATAT+TGG 0.385640 3.4:-50686158 None:intergenic
TCCCTCCAATGTTCTTTCAA+TGG 0.391849 3.4:-50681710 None:intergenic
CAAATAGACCTTCGTTGTCT+TGG 0.393808 3.4:-50686257 None:intergenic
GGTGCTGGTAAGATTGGGTT+TGG 0.396080 3.4:+50686894 MS.gene73111:CDS
GGCAATGTCAAGGCCGTAGA+AGG 0.407381 3.4:-50686472 None:intergenic
GCTAACCTACCAGCCAAATC+TGG 0.414039 3.4:+50685529 MS.gene73111:CDS
TTCTACGGCCTTGACATTGC+CGG 0.414283 3.4:+50686474 MS.gene73111:CDS
TCTGGTAGCCTTATTGGATC+AGG 0.419706 3.4:+50685547 MS.gene73111:CDS
GAGAAAATAGAGGATGAGAT+TGG 0.420183 3.4:-50686522 None:intergenic
GTTTGTTGGACGAATGAGAT+TGG 0.425702 3.4:-50686315 None:intergenic
GGTCTATTTGGCGGCTCAGC+CGG 0.434342 3.4:+50686270 MS.gene73111:CDS
TCCCCGGGAGACCGTGGAAA+AGG 0.440785 3.4:-50686445 None:intergenic
CCATTATTCAGTTGGGAACA+TGG 0.444472 3.4:-50685346 None:intergenic
AGAGGATGAGATTGGAAGCT+TGG 0.445753 3.4:-50686514 None:intergenic
TCAGCCGGCCTATTAGGCCT+TGG 0.449257 3.4:+50686285 MS.gene73111:CDS
ATAGTGATATTACTATCTTT+GGG 0.452276 3.4:+50686832 MS.gene73111:CDS
AACGGTACCAGAGTCAATAA+TGG 0.452998 3.4:-50686556 None:intergenic
TATTGGAGGCGCCAAATGTA+AGG 0.464102 3.4:-50686401 None:intergenic
ATGTTGGTGCTGGTAAGATT+GGG 0.467919 3.4:+50686889 MS.gene73111:CDS
CCTTCCACATCTAGCGGCGT+TGG 0.468987 3.4:+50686375 MS.gene73111:CDS
TTCTTGATCATGACAAAGAA+AGG 0.474931 3.4:+50685401 MS.gene73111:CDS
AAGAATAATATTAATTTGGA+GGG 0.476847 3.4:+50685457 MS.gene73111:CDS
AAGATTGGGTTTGGATCAAA+TGG 0.477835 3.4:+50686903 MS.gene73111:CDS
GTGCCAACGGATGCCATTGA+TGG 0.480188 3.4:+50686216 MS.gene73111:CDS
ATATCACTATCATCTCCATT+TGG 0.480356 3.4:-50686819 None:intergenic
AAAAGAGAGCAAGAGAAACT+AGG 0.481899 3.4:-50681660 None:intergenic
ATTTGATACCTTAGCACAGC+GGG 0.482200 3.4:-50686118 None:intergenic
CTAGAGGTTGTTTATGATGT+TGG 0.484309 3.4:+50686873 MS.gene73111:CDS
TGCCTTTCTTGAAGGAATCT+CGG 0.485188 3.4:-50686614 None:intergenic
TAAGAATAATATTAATTTGG+AGG 0.487415 3.4:+50685456 MS.gene73111:CDS
ACGGTGGAAATAGCCGCGCC+AGG 0.495356 3.4:+50686750 MS.gene73111:CDS
CTTTGCCATTGAAAGAACAT+TGG 0.498496 3.4:+50681705 MS.gene73111:CDS
TGGCAAAGCTCTTCTCCAAA+AGG 0.498928 3.4:-50681690 None:intergenic
TGTGTATATGGCATCCAATA+TGG 0.499340 3.4:+50686144 MS.gene73111:CDS
TTTCCTCGGTGGTGGTGTCA+CGG 0.509350 3.4:+50686731 MS.gene73111:CDS
CTCCGAGATTCCTTCAAGAA+AGG 0.510214 3.4:+50686612 MS.gene73111:CDS
CCCCGGGAGACCGTGGAAAA+GGG 0.511612 3.4:-50686444 None:intergenic
GCACTACAGTTAGCCGTTCG+CGG 0.512484 3.4:-50686197 None:intergenic
TGCCATTGAAAGAACATTGG+AGG 0.514882 3.4:+50681708 MS.gene73111:CDS
CGCTGATTCCGGCAATGTCA+AGG 0.518348 3.4:-50686482 None:intergenic
GTTGTTTATGATGTTGGTGC+TGG 0.527246 3.4:+50686879 MS.gene73111:CDS
GGCCGTAGAAGGAATTTCCC+CGG 0.531353 3.4:-50686461 None:intergenic
GTGTCTAAAATTGAAACCGC+TGG 0.532288 3.4:-50686657 None:intergenic
CTCGCCACGTAAAGTATCCC+TGG 0.532549 3.4:-50686768 None:intergenic
GACATTGCCGGAATCAGCGT+TGG 0.538029 3.4:+50686486 MS.gene73111:CDS
ATTGCCGGAATCAGCGTTGG+TGG 0.539994 3.4:+50686489 MS.gene73111:CDS
CGGAGGCAGCCGTGTAATAA+CGG 0.541209 3.4:-50686574 None:intergenic
GAGAGCTGATTTGAACAAGA+TGG 0.544703 3.4:-50681738 None:intergenic
ACTCAGCTCTCATCAGCTAC+AGG 0.547822 3.4:+50685760 MS.gene73111:CDS
AGTATCCGACTGAGAAGGAT+TGG 0.551232 3.4:-50686170 None:intergenic
TCCCGGGGAAATTCCTTCTA+CGG 0.553908 3.4:+50686459 MS.gene73111:CDS
ACACATGCTATGATCTTAGC+GGG 0.560360 3.4:+50686676 MS.gene73111:CDS
GAAGAGCTGCAAGAAGATGA+TGG 0.561352 3.4:-50681766 None:intergenic
TCTTGATCATGACAAAGAAA+GGG 0.562809 3.4:+50685402 MS.gene73111:CDS
GACAACGAAGGTCTATTTGG+CGG 0.563856 3.4:+50686261 MS.gene73111:CDS
GCCATTGAAAGAACATTGGA+GGG 0.564276 3.4:+50681709 MS.gene73111:CDS
GGTGGTGCCATTATTGACTC+TGG 0.564716 3.4:+50686549 MS.gene73111:CDS
ACGACCAAGGCCTAATAGGC+CGG 0.565407 3.4:-50686289 None:intergenic
GTGGCCAACGCCGCTAGATG+TGG 0.569024 3.4:-50686379 None:intergenic
CGGTGGAAATAGCCGCGCCA+GGG 0.571257 3.4:+50686751 MS.gene73111:CDS
CTGGTAGCCTTATTGGATCA+GGG 0.571400 3.4:+50685548 MS.gene73111:CDS
GGAATTTCCCCGGGAGACCG+TGG 0.575875 3.4:-50686451 None:intergenic
TCTTGCAGCTCTTCTACCAA+AGG 0.581181 3.4:+50681775 MS.gene73111:CDS
GTCAATAATGGCACCACCGG+AGG 0.582980 3.4:-50686544 None:intergenic
GAAGTATCCAGTTGCTCCAG+CGG 0.586502 3.4:+50686641 MS.gene73111:CDS
ACTCAATGTCAACCTTGTGT+TGG 0.586542 3.4:+50685652 MS.gene73111:CDS
GACACATGCTATGATCTTAG+CGG 0.587792 3.4:+50686675 MS.gene73111:CDS
ACACTGGTAGTGATCTCACT+TGG 0.590545 3.4:+50685629 MS.gene73111:CDS
ACCACCGGAGGAGAAAATAG+AGG 0.591518 3.4:-50686532 None:intergenic
ATCTCGGAGGCTAGCATAGG+CGG 0.591836 3.4:-50686598 None:intergenic
TCGGATACTTCAGCCGCGAA+CGG 0.596592 3.4:+50686184 MS.gene73111:CDS
AGAGTCAATAATGGCACCAC+CGG 0.600672 3.4:-50686547 None:intergenic
GCCGTAGAAGGAATTTCCCC+GGG 0.603129 3.4:-50686460 None:intergenic
GGAATCTCGGAGGCTAGCAT+AGG 0.604176 3.4:-50686601 None:intergenic
AAACCATCAATGGCATCCGT+TGG 0.607287 3.4:-50686219 None:intergenic
TGTCTTCCTTCCACATCTAG+CGG 0.608794 3.4:+50686369 MS.gene73111:CDS
ATAAGGCTACCAGATTTGGC+TGG 0.613804 3.4:-50685538 None:intergenic
GGTGACCAATCCTTCTCAGT+CGG 0.613891 3.4:+50686165 MS.gene73111:CDS
AGCTGCAAGAAGATGATGGT+AGG 0.614693 3.4:-50681762 None:intergenic
GCTGAAGTATCCGACTGAGA+AGG 0.619789 3.4:-50686175 None:intergenic
TCAAGAATATCACTGTGTGT+TGG 0.629293 3.4:-50685385 None:intergenic
TTAGATGTGTTACACAAACA+TGG 0.632092 3.4:+50685322 MS.gene73111:CDS
GGCTACCAGATTTGGCTGGT+AGG 0.632445 3.4:-50685534 None:intergenic
CGCGCCAGGGATACTTTACG+TGG 0.637038 3.4:+50686764 MS.gene73111:CDS
AGGCTAGCATAGGCGGTCGG+AGG 0.645358 3.4:-50686591 None:intergenic
ACGGCTAACTGTAGTGCCAA+CGG 0.648046 3.4:+50686203 MS.gene73111:CDS
CACGTAAAGTATCCCTGGCG+CGG 0.653433 3.4:-50686763 None:intergenic
TTGATACCTTAGCACAGCGG+GGG 0.655284 3.4:-50686116 None:intergenic
TAGATGTGTTACACAAACAT+GGG 0.656261 3.4:+50685323 MS.gene73111:CDS
CCAACGCCGCTAGATGTGGA+AGG 0.656708 3.4:-50686375 None:intergenic
CGGAGGCTAGCATAGGCGGT+CGG 0.657114 3.4:-50686594 None:intergenic
ACTCTGGTACCGTTATTACA+CGG 0.660158 3.4:+50686565 MS.gene73111:CDS
ATGAGATTGGATGACGACCA+AGG 0.662262 3.4:-50686302 None:intergenic
TGGAGGCGCCAAATGTAAGG+TGG 0.666720 3.4:-50686398 None:intergenic
CCTCGGTGGTGGTGTCACGG+TGG 0.687294 3.4:+50686734 MS.gene73111:CDS
GGTTGCGGCCAAGACAACGA+AGG 0.687986 3.4:+50686249 MS.gene73111:CDS
TGTGCAACAAAGAACACTAG+AGG 0.689240 3.4:+50686857 MS.gene73111:CDS
TTTGATACCTTAGCACAGCG+GGG 0.693161 3.4:-50686117 None:intergenic
TTGTAGCAAGAACCAACACA+AGG 0.700320 3.4:-50685664 None:intergenic
CTTTCTTGAAGGAATCTCGG+AGG 0.711283 3.4:-50686611 None:intergenic
CATTTGATACCTTAGCACAG+CGG 0.713175 3.4:-50686119 None:intergenic
CCACCGTGACACCACCACCG+AGG 0.762194 3.4:-50686734 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG - chr3.4:50682635-50682654 None:intergenic 10.0%
!! AATAAAATAAATGAATTGAT+CGG - chr3.4:50683125-50683144 None:intergenic 10.0%
!! ATCTAAGAATAATATTAATT+TGG + chr3.4:50685453-50685472 MS.gene73111:CDS 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr3.4:50682636-50682655 None:intergenic 10.0%
!! TAATAATAGAAAACAATTAT+TGG + chr3.4:50684738-50684757 MS.gene73111:intron 10.0%
!!! AATTAAAATTATGGATTAAT+CGG - chr3.4:50684249-50684268 None:intergenic 10.0%
!!! CTATATTAAATTTTATTATG+TGG + chr3.4:50684693-50684712 MS.gene73111:intron 10.0%
!!! CTTTTATAAGTAATTTTATA+AGG - chr3.4:50683923-50683942 None:intergenic 10.0%
!!! GAGATTTTTTTTTTTTTTTA+TGG - chr3.4:50684912-50684931 None:intergenic 10.0%
!!! GTTACATTATTATTTTTATA+GGG + chr3.4:50686048-50686067 MS.gene73111:intron 10.0%
!!! TGTAATAATAATGATTTTTT+GGG - chr3.4:50686088-50686107 None:intergenic 10.0%
!!! TGTTACATTATTATTTTTAT+AGG + chr3.4:50686047-50686066 MS.gene73111:intron 10.0%
!! AAAAGAAACTAAAATATTTG+TGG + chr3.4:50683781-50683800 MS.gene73111:intron 15.0%
!! AAAATAAATAATAGCTAGTT+GGG - chr3.4:50683646-50683665 None:intergenic 15.0%
!! AAATGATAAGTTTATAATCA+CGG + chr3.4:50683323-50683342 MS.gene73111:intron 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr3.4:50682634-50682653 None:intergenic 15.0%
!! ATTCTTAGATGATAATAATT+TGG - chr3.4:50685443-50685462 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr3.4:50682570-50682589 None:intergenic 15.0%
!! ATTTGTTTATTAACTTTAGT+GGG - chr3.4:50683578-50683597 None:intergenic 15.0%
!! CAAAAAATCATTATTATTAC+AGG + chr3.4:50686087-50686106 MS.gene73111:intron 15.0%
!! CAATTATTTGTAATTAATGT+CGG + chr3.4:50681953-50681972 MS.gene73111:intron 15.0%
!! TAAAATAAATAATAGCTAGT+TGG - chr3.4:50683647-50683666 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr3.4:50682571-50682590 None:intergenic 15.0%
!! TATTTGTTTATTAACTTTAG+TGG - chr3.4:50683579-50683598 None:intergenic 15.0%
!! TCATTGGAAAAATTATAAAA+TGG + chr3.4:50682197-50682216 MS.gene73111:intron 15.0%
!!! AACTAGCTATTATTTATTTT+AGG + chr3.4:50683646-50683665 MS.gene73111:intron 15.0%
!!! AAGAATAATATTAATTTGGA+GGG + chr3.4:50685457-50685476 MS.gene73111:CDS 15.0%
!!! ATTGTATTTTGTTGATTTAT+AGG + chr3.4:50683497-50683516 MS.gene73111:intron 15.0%
!!! ATTGTTTTCTATTATTAGTT+AGG - chr3.4:50684735-50684754 None:intergenic 15.0%
!!! CTGTAATAATAATGATTTTT+TGG - chr3.4:50686089-50686108 None:intergenic 15.0%
!!! TAAGAATAATATTAATTTGG+AGG + chr3.4:50685456-50685475 MS.gene73111:CDS 15.0%
!!! TATAGCATTGTATATTTTTT+TGG + chr3.4:50683458-50683477 MS.gene73111:intron 15.0%
!!! TTATAATTTTTCCAATGAAT+TGG - chr3.4:50682195-50682214 None:intergenic 15.0%
!!! TTATTTCTAATAATGTTGTA+TGG + chr3.4:50685030-50685049 MS.gene73111:intron 15.0%
!! AAAGTGGAATATATTGTATT+GGG - chr3.4:50682611-50682630 None:intergenic 20.0%
!! AAATATATCAATTGAGAAAC+GGG - chr3.4:50682894-50682913 None:intergenic 20.0%
!! AATAGAAAACAATTATTGGT+GGG + chr3.4:50684742-50684761 MS.gene73111:intron 20.0%
!! AATGATAAGTTTATAATCAC+GGG + chr3.4:50683324-50683343 MS.gene73111:intron 20.0%
!! AATTTCAATATCAACTTGTA+AGG + chr3.4:50684431-50684450 MS.gene73111:intron 20.0%
!! ATAGTGATATTACTATCTTT+GGG + chr3.4:50686832-50686851 MS.gene73111:CDS 20.0%
!! ATATTAAACAACCAATTCAT+TGG + chr3.4:50682181-50682200 MS.gene73111:intron 20.0%
!! ATGAAGATATTGACAAAATT+TGG + chr3.4:50683684-50683703 MS.gene73111:intron 20.0%
!! CAAATATATCAATTGAGAAA+CGG - chr3.4:50682895-50682914 None:intergenic 20.0%
!! CGACATTAATTACAAATAAT+TGG - chr3.4:50681955-50681974 None:intergenic 20.0%
!! CTACTAGATACAAAAATTTA+AGG - chr3.4:50683900-50683919 None:intergenic 20.0%
!! GTTAATAAACAAATAACAAG+TGG + chr3.4:50683584-50683603 MS.gene73111:intron 20.0%
!! TAATAGAAAACAATTATTGG+TGG + chr3.4:50684741-50684760 MS.gene73111:intron 20.0%
!! TGATTAAATATATTGACCTT+TGG - chr3.4:50681794-50681813 None:intergenic 20.0%
!! TTGGAAAAATTATAAAATGG+AGG + chr3.4:50682200-50682219 MS.gene73111:intron 20.0%
!!! AACTTTATATATTTTCCATG+TGG + chr3.4:50683974-50683993 MS.gene73111:intron 20.0%
!!! ACTTGAGTTTTTTTTTTAAG+TGG + chr3.4:50684190-50684209 MS.gene73111:intron 20.0%
!!! ATATTATTATCTTTGAAGCA+CGG + chr3.4:50685786-50685805 MS.gene73111:intron 20.0%
!!! CAATAAATGCATTATTTTTG+TGG - chr3.4:50683267-50683286 None:intergenic 20.0%
!!! CATTTTCTCTTTCTTTTTTA+TGG - chr3.4:50682295-50682314 None:intergenic 20.0%
!!! CTTGAGTTTTTTTTTTAAGT+GGG + chr3.4:50684191-50684210 MS.gene73111:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr3.4:50682501-50682520 None:intergenic 20.0%
!!! GTATTTTACGTACTTATTAT+TGG - chr3.4:50686421-50686440 None:intergenic 20.0%
!!! TATGAGTTACCTTTTTTTTA+GGG + chr3.4:50684974-50684993 MS.gene73111:intron 20.0%
!!! TGAGAATACTTGATAATATA+TGG - chr3.4:50684883-50684902 None:intergenic 20.0%
!!! TTATGAGTTACCTTTTTTTT+AGG + chr3.4:50684973-50684992 MS.gene73111:intron 20.0%
! AAACAATATTCATTCACGTT+TGG + chr3.4:50683546-50683565 MS.gene73111:intron 25.0%
! ACATATATCATATTCGATTG+TGG + chr3.4:50684117-50684136 MS.gene73111:intron 25.0%
! ACCAAATAAAAAACCATCAA+TGG - chr3.4:50686232-50686251 None:intergenic 25.0%
! AGTCAATGATTTAACTAGAT+GGG + chr3.4:50683809-50683828 MS.gene73111:intron 25.0%
! ATACTTATATCACAAGTGAA+AGG - chr3.4:50684778-50684797 None:intergenic 25.0%
! ATGTTTCATTGTTCAAATTC+AGG + chr3.4:50685280-50685299 MS.gene73111:intron 25.0%
! ATTCTGTAGCTCAATTTATT+TGG - chr3.4:50681862-50681881 None:intergenic 25.0%
! CACTAATTAATGTGTAAGTT+TGG + chr3.4:50682133-50682152 MS.gene73111:intron 25.0%
! CATATATCATATTCGATTGT+GGG + chr3.4:50684118-50684137 MS.gene73111:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr3.4:50682612-50682631 None:intergenic 25.0%
! GAGTATTAAAGATAGGAAAA+AGG + chr3.4:50682701-50682720 MS.gene73111:intron 25.0%
! GATAGTGATATTACTATCTT+TGG + chr3.4:50686831-50686850 MS.gene73111:CDS 25.0%
! TAATAAGAAGTAGACTTTGA+TGG - chr3.4:50685712-50685731 None:intergenic 25.0%
! TAATACAAGTCTATTCATCA+AGG - chr3.4:50685212-50685231 None:intergenic 25.0%
! TACATTATTTCATGCATGTA+TGG - chr3.4:50684574-50684593 None:intergenic 25.0%
! TACTTATATCACAAGTGAAA+GGG - chr3.4:50684777-50684796 None:intergenic 25.0%
! TAGTCAATGATTTAACTAGA+TGG + chr3.4:50683808-50683827 MS.gene73111:intron 25.0%
! TGTGAATGAATATAAGTGAT+GGG + chr3.4:50684077-50684096 MS.gene73111:intron 25.0%
! TTCTTTACGACAATGTAAAT+TGG - chr3.4:50683759-50683778 None:intergenic 25.0%
! TTGTGAATGAATATAAGTGA+TGG + chr3.4:50684076-50684095 MS.gene73111:intron 25.0%
! TTTCAAATTATTAGCTGTGT+CGG - chr3.4:50685840-50685859 None:intergenic 25.0%
!! AATAGATACATAATTTGCAG+TGG + chr3.4:50681890-50681909 MS.gene73111:intron 25.0%
!! ATAAGTGACAAATCCTTTTT+AGG - chr3.4:50685604-50685623 None:intergenic 25.0%
!! ATTAGAACGTTGATTAATAG+AGG + chr3.4:50684500-50684519 MS.gene73111:intron 25.0%
!! TATTAATTTGGAGGGATTTA+TGG + chr3.4:50685465-50685484 MS.gene73111:CDS 25.0%
!! TTATAATTTGTGGCTAAACT+CGG + chr3.4:50683423-50683442 MS.gene73111:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - chr3.4:50682524-50682543 None:intergenic 25.0%
!! TTTTACGTACTTATTATTGG+AGG - chr3.4:50686418-50686437 None:intergenic 25.0%
!!! AGCATTGTATATTTTTTTGG+AGG + chr3.4:50683461-50683480 MS.gene73111:intron 25.0%
!!! ATCTAATGATGCTTTTGTTT+TGG - chr3.4:50685308-50685327 None:intergenic 25.0%
!!! GCATTGTATATTTTTTTGGA+GGG + chr3.4:50683462-50683481 MS.gene73111:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr3.4:50682502-50682521 None:intergenic 25.0%
!!! TAAATGAATTGATCGGTTTT+TGG - chr3.4:50683118-50683137 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr3.4:50682523-50682542 None:intergenic 25.0%
AATTCTGCCAATTTCTTTCA+TGG + chr3.4:50682318-50682337 MS.gene73111:intron 30.0%
AGTCTCACATCGAAATATAT+AGG - chr3.4:50684173-50684192 None:intergenic 30.0%
ATAATCAGTGTCATGTTTGA+AGG + chr3.4:50682035-50682054 MS.gene73111:intron 30.0%
ATATCACTATCATCTCCATT+TGG - chr3.4:50686822-50686841 None:intergenic 30.0%
ATGCATCTGATACAGTATAT+AGG + chr3.4:50685148-50685167 MS.gene73111:intron 30.0%
ATTCTGCCAATTTCTTTCAT+GGG + chr3.4:50682319-50682338 MS.gene73111:intron 30.0%
CAATACTTGACAATACTAGA+TGG + chr3.4:50684385-50684404 MS.gene73111:intron 30.0%
CATACTAGTATAAACTATGG+AGG - chr3.4:50683299-50683318 None:intergenic 30.0%
CATCTAGTATTGTCAAGTAT+TGG - chr3.4:50684387-50684406 None:intergenic 30.0%
CTAGGAAGAAATGAGAAATT+TGG - chr3.4:50681645-50681664 None:intergenic 30.0%
CTATGAAAGAATCTCATTCA+CGG + chr3.4:50683386-50683405 MS.gene73111:intron 30.0%
CTCCATAGTTTATACTAGTA+TGG + chr3.4:50683297-50683316 MS.gene73111:intron 30.0%
GAAAAAACTAATCTTCGGAA+TGG - chr3.4:50686715-50686734 None:intergenic 30.0%
GAACAATGAAACATGTTTAG+TGG - chr3.4:50685274-50685293 None:intergenic 30.0%
GACAAAATCTTATCTTGAGT+TGG - chr3.4:50684803-50684822 None:intergenic 30.0%
GTATCAAATGCATGTGTATA+TGG + chr3.4:50686132-50686151 MS.gene73111:CDS 30.0%
GTCAATGATTTAACTAGATG+GGG + chr3.4:50683810-50683829 MS.gene73111:intron 30.0%
GTCCATACTAGTATAAACTA+TGG - chr3.4:50683302-50683321 None:intergenic 30.0%
GTGATCACGATTATAATTTG+TGG + chr3.4:50683413-50683432 MS.gene73111:intron 30.0%
GTGTTCCTAATTGTAATTGA+AGG - chr3.4:50684546-50684565 None:intergenic 30.0%
TAATGTCGGTATATAGCATA+TGG + chr3.4:50681967-50681986 MS.gene73111:intron 30.0%
TAGAAGTTGCCCTAAAAAAA+AGG - chr3.4:50684986-50685005 None:intergenic 30.0%
TAGATGTGTTACACAAACAT+GGG + chr3.4:50685323-50685342 MS.gene73111:CDS 30.0%
TATGAAAGAATCTCATTCAC+GGG + chr3.4:50683387-50683406 MS.gene73111:intron 30.0%
TATTGGAAACATATCTCTCA+AGG - chr3.4:50684833-50684852 None:intergenic 30.0%
TCAAACAAGAAATGTATGAG+TGG - chr3.4:50682742-50682761 None:intergenic 30.0%
TCTTGATCATGACAAAGAAA+GGG + chr3.4:50685402-50685421 MS.gene73111:CDS 30.0%
TGCATCTGATACAGTATATA+GGG + chr3.4:50685149-50685168 MS.gene73111:intron 30.0%
TGCTTTCTCAACCAATAAAA+TGG + chr3.4:50682397-50682416 MS.gene73111:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr3.4:50682627-50682646 None:intergenic 30.0%
TTAGATGTGTTACACAAACA+TGG + chr3.4:50685322-50685341 MS.gene73111:CDS 30.0%
TTCTTGATCATGACAAAGAA+AGG + chr3.4:50685401-50685420 MS.gene73111:CDS 30.0%
! ACCATTTTCTTGAAAATGGT+AGG + chr3.4:50683174-50683193 MS.gene73111:intron 30.0%
! CCATTTTCTTGAAAATGGTA+GGG + chr3.4:50683175-50683194 MS.gene73111:intron 30.0%
! GAGAAAATACATTTTCCACA+TGG - chr3.4:50683992-50684011 None:intergenic 30.0%
! GTTTATTAACTTTAGTGGGT+TGG - chr3.4:50683574-50683593 None:intergenic 30.0%
! TAGGACCATTTTCTTGAAAA+TGG + chr3.4:50683170-50683189 MS.gene73111:intron 30.0%
! TCTCTTTTTCTTTTGCCTTT+TGG + chr3.4:50681675-50681694 MS.gene73111:CDS 30.0%
! TGCTTTTCCATTATTCAGTT+GGG - chr3.4:50685356-50685375 None:intergenic 30.0%
!! AAAGATGGGTTCCATTTTAT+TGG - chr3.4:50682411-50682430 None:intergenic 30.0%
!! TTGCTTTTCCATTATTCAGT+TGG - chr3.4:50685357-50685376 None:intergenic 30.0%
!!! GACAATACGAGAAAGTTTTT+TGG - chr3.4:50686353-50686372 None:intergenic 30.0%
!!! GATGGTTTTTTATTTGGTTG+CGG + chr3.4:50686234-50686253 MS.gene73111:CDS 30.0%
!!! GCCATTGATGGTTTTTTATT+TGG + chr3.4:50686228-50686247 MS.gene73111:CDS 30.0%
!!! GGAACTATTTTGTTGTTGTA+GGG + chr3.4:50685569-50685588 MS.gene73111:CDS 30.0%
!!! GGTATTTTTGAGATGTTTGT+TGG - chr3.4:50686332-50686351 None:intergenic 30.0%
!!! TTGTCACTTATTTTTGACAC+TGG + chr3.4:50685613-50685632 MS.gene73111:CDS 30.0%
AAAACCAATAGTGACAAGTG+TGG - chr3.4:50684058-50684077 None:intergenic 35.0%
AAAAGAGAGCAAGAGAAACT+AGG - chr3.4:50681663-50681682 None:intergenic 35.0%
AAGATTGGGTTTGGATCAAA+TGG + chr3.4:50686903-50686922 MS.gene73111:CDS 35.0%
AATAGTTCCCTGATCCAATA+AGG - chr3.4:50685558-50685577 None:intergenic 35.0%
ACAAGAAAGAAAAACGTCAG+TGG + chr3.4:50684619-50684638 MS.gene73111:intron 35.0%
AGAGGTCAAATAAATTGGGA+CGG + chr3.4:50682675-50682694 MS.gene73111:intron 35.0%
AGCCAAGAGGTCAAATAAAT+TGG + chr3.4:50682670-50682689 MS.gene73111:intron 35.0%
ATACAACCAATTGACACTTG+AGG + chr3.4:50684013-50684032 MS.gene73111:intron 35.0%
ATATGGATGAGACTATACCA+AGG - chr3.4:50684866-50684885 None:intergenic 35.0%
CCATGCCTTCAATTACAATT+AGG + chr3.4:50684538-50684557 MS.gene73111:intron 35.0%
CCGAGGAAAAAACTAATCTT+CGG - chr3.4:50686720-50686739 None:intergenic 35.0%
CCTAATTGTAATTGAAGGCA+TGG - chr3.4:50684541-50684560 None:intergenic 35.0%
CTAGAGGTTGTTTATGATGT+TGG + chr3.4:50686873-50686892 MS.gene73111:CDS 35.0%
CTTTGCCATTGAAAGAACAT+TGG + chr3.4:50681705-50681724 MS.gene73111:CDS 35.0%
GAAAAACCTCAAGTGTCAAT+TGG - chr3.4:50684022-50684041 None:intergenic 35.0%
GAGAAAATAGAGGATGAGAT+TGG - chr3.4:50686525-50686544 None:intergenic 35.0%
GCCAAGAGGTCAAATAAATT+GGG + chr3.4:50682671-50682690 MS.gene73111:intron 35.0%
TATAACCCTCAAAACAAGAC+CGG - chr3.4:50682007-50682026 None:intergenic 35.0%
TATGGTACACATAAACTCTC+CGG + chr3.4:50681985-50682004 MS.gene73111:intron 35.0%
TCAAGAATATCACTGTGTGT+TGG - chr3.4:50685388-50685407 None:intergenic 35.0%
TCAATACAAGCACAATCACA+AGG + chr3.4:50684318-50684337 MS.gene73111:intron 35.0%
TCCCAATTTATTTGACCTCT+TGG - chr3.4:50682675-50682694 None:intergenic 35.0%
TGTGTATATGGCATCCAATA+TGG + chr3.4:50686144-50686163 MS.gene73111:CDS 35.0%
! AAAATACACTCCCTTTTCCA+CGG + chr3.4:50686434-50686453 MS.gene73111:CDS 35.0%
! CTAGTAGTCTGAAATTCGAT+CGG - chr3.4:50683153-50683172 None:intergenic 35.0%
! CTGACGTTTTTCTTTCTTGT+TGG - chr3.4:50684619-50684638 None:intergenic 35.0%
! CTTTCCATCTCAAGATCTTT+TGG - chr3.4:50683710-50683729 None:intergenic 35.0%
! GAATGAATATAAGTGATGGG+TGG + chr3.4:50684080-50684099 MS.gene73111:intron 35.0%
!! CCCTACCATTTTCAAGAAAA+TGG - chr3.4:50683178-50683197 None:intergenic 35.0%
!! TTATCTTTGAAGCACGGATA+TGG + chr3.4:50685792-50685811 MS.gene73111:intron 35.0%
!! TTATTGGTTGAGAAAGCACT+AGG - chr3.4:50682395-50682414 None:intergenic 35.0%
!!! AAGATTAGTTTTTTCCTCGG+TGG + chr3.4:50686720-50686739 MS.gene73111:CDS 35.0%
!!! CCGAAGATTAGTTTTTTCCT+CGG + chr3.4:50686717-50686736 MS.gene73111:CDS 35.0%
!!! GGGAACTATTTTGTTGTTGT+AGG + chr3.4:50685568-50685587 MS.gene73111:CDS 35.0%
!!! TATTTTGTTGTTGTAGGGCT+TGG + chr3.4:50685574-50685593 MS.gene73111:CDS 35.0%
!!! TTCATTTTAGCTACACGTCA+CGG + chr3.4:50683613-50683632 MS.gene73111:intron 35.0%
AACGGTACCAGAGTCAATAA+TGG - chr3.4:50686559-50686578 None:intergenic 40.0%
AATTAGTGCGTACAAGATGC+AGG - chr3.4:50682121-50682140 None:intergenic 40.0%
ACACATGCTATGATCTTAGC+GGG + chr3.4:50686676-50686695 MS.gene73111:CDS 40.0%
ACTCAATGTCAACCTTGTGT+TGG + chr3.4:50685652-50685671 MS.gene73111:CDS 40.0%
ACTCTGGTACCGTTATTACA+CGG + chr3.4:50686565-50686584 MS.gene73111:CDS 40.0%
ATTAGTGCGTACAAGATGCA+GGG - chr3.4:50682120-50682139 None:intergenic 40.0%
ATTTGATACCTTAGCACAGC+GGG - chr3.4:50686121-50686140 None:intergenic 40.0%
CAAATAGACCTTCGTTGTCT+TGG - chr3.4:50686260-50686279 None:intergenic 40.0%
CAAGACAACGAAGGTCTATT+TGG + chr3.4:50686258-50686277 MS.gene73111:CDS 40.0%
CATTTGATACCTTAGCACAG+CGG - chr3.4:50686122-50686141 None:intergenic 40.0%
CCATGTTCCCAACTGAATAA+TGG + chr3.4:50685346-50685365 MS.gene73111:CDS 40.0%
CCATTATTCAGTTGGGAACA+TGG - chr3.4:50685349-50685368 None:intergenic 40.0%
CGATCGAATTTCAGACTACT+AGG + chr3.4:50683151-50683170 MS.gene73111:intron 40.0%
GAAAATGGGTCAGTTATTCC+AGG - chr3.4:50682487-50682506 None:intergenic 40.0%
GACACATGCTATGATCTTAG+CGG + chr3.4:50686675-50686694 MS.gene73111:CDS 40.0%
GACTATACCAAGGAATCTAG+AGG - chr3.4:50684856-50684875 None:intergenic 40.0%
GATGCATCAAGTCTCAATGT+TGG - chr3.4:50685135-50685154 None:intergenic 40.0%
GCCATTGAAAGAACATTGGA+GGG + chr3.4:50681709-50681728 MS.gene73111:CDS 40.0%
GTCAAATAAATTGGGACGGA+GGG + chr3.4:50682679-50682698 MS.gene73111:intron 40.0%
GTGATTACAAGTGTCAGTGT+CGG + chr3.4:50685879-50685898 MS.gene73111:intron 40.0%
GTTGTTTATGATGTTGGTGC+TGG + chr3.4:50686879-50686898 MS.gene73111:CDS 40.0%
TCCAATAAGGCTACCAGATT+TGG - chr3.4:50685545-50685564 None:intergenic 40.0%
TCCAATACCTCTAGATTCCT+TGG + chr3.4:50684846-50684865 MS.gene73111:intron 40.0%
TCCCTCCAATGTTCTTTCAA+TGG - chr3.4:50681713-50681732 None:intergenic 40.0%
TGCCAATTTCTTTCATGGGT+GGG + chr3.4:50682323-50682342 MS.gene73111:intron 40.0%
TGCCATTGAAAGAACATTGG+AGG + chr3.4:50681708-50681727 MS.gene73111:CDS 40.0%
TGCCTTTCTTGAAGGAATCT+CGG - chr3.4:50686617-50686636 None:intergenic 40.0%
TGTCACGGAGAATATTCACA+TGG + chr3.4:50682353-50682372 MS.gene73111:intron 40.0%
TGTGCAACAAAGAACACTAG+AGG + chr3.4:50686857-50686876 MS.gene73111:CDS 40.0%
TTGGCCAAAAGATCTTGAGA+TGG + chr3.4:50683703-50683722 MS.gene73111:intron 40.0%
TTGTAGCAAGAACCAACACA+AGG - chr3.4:50685667-50685686 None:intergenic 40.0%
! ACCAAGGAATCTAGAGGTAT+TGG - chr3.4:50684850-50684869 None:intergenic 40.0%
! GAGTTTGAAGCAAGCTTGTT+TGG + chr3.4:50686788-50686807 MS.gene73111:CDS 40.0%
! GTGTCTAAAATTGAAACCGC+TGG - chr3.4:50686660-50686679 None:intergenic 40.0%
! GTTTGTTGGACGAATGAGAT+TGG - chr3.4:50686318-50686337 None:intergenic 40.0%
! TCATCCTCTATTTTCTCCTC+CGG + chr3.4:50686528-50686547 MS.gene73111:CDS 40.0%
!! ACGGAGGGAGTATTAAAGAT+AGG + chr3.4:50682694-50682713 MS.gene73111:intron 40.0%
!! AGAAGGATTGGTCACCATAT+TGG - chr3.4:50686161-50686180 None:intergenic 40.0%
!! ATGTTGGTGCTGGTAAGATT+GGG + chr3.4:50686889-50686908 MS.gene73111:CDS 40.0%
!! GAGAGCTGATTTGAACAAGA+TGG - chr3.4:50681741-50681760 None:intergenic 40.0%
!!! ATTAGTTTTTTCCTCGGTGG+TGG + chr3.4:50686723-50686742 MS.gene73111:CDS 40.0%
AAAAACGTCAGTGGTCGACA+TGG + chr3.4:50684628-50684647 MS.gene73111:intron 45.0%
AAAACGTCAGTGGTCGACAT+GGG + chr3.4:50684629-50684648 MS.gene73111:intron 45.0%
AAACCATCAATGGCATCCGT+TGG - chr3.4:50686222-50686241 None:intergenic 45.0%
ACCAATAGTGACAAGTGTGG+TGG - chr3.4:50684055-50684074 None:intergenic 45.0%
AGAAATGTATGAGTGGCAGC+TGG - chr3.4:50682735-50682754 None:intergenic 45.0%
AGAGGATGAGATTGGAAGCT+TGG - chr3.4:50686517-50686536 None:intergenic 45.0%
AGAGTCAATAATGGCACCAC+CGG - chr3.4:50686550-50686569 None:intergenic 45.0%
AGTATCCGACTGAGAAGGAT+TGG - chr3.4:50686173-50686192 None:intergenic 45.0%
ATAAGGCTACCAGATTTGGC+TGG - chr3.4:50685541-50685560 None:intergenic 45.0%
ATGAGATTGGATGACGACCA+AGG - chr3.4:50686305-50686324 None:intergenic 45.0%
ATGGGTCAGTTATTCCAGGA+CGG - chr3.4:50682483-50682502 None:intergenic 45.0%
CTCCGAGATTCCTTCAAGAA+AGG + chr3.4:50686612-50686631 MS.gene73111:CDS 45.0%
CTGCCAATTTCTTTCATGGG+TGG + chr3.4:50682322-50682341 MS.gene73111:intron 45.0%
CTTCGTCATGCCTTTCTTGA+AGG - chr3.4:50686625-50686644 None:intergenic 45.0%
CTTTCTTGAAGGAATCTCGG+AGG - chr3.4:50686614-50686633 None:intergenic 45.0%
GAAGAGCTGCAAGAAGATGA+TGG - chr3.4:50681769-50681788 None:intergenic 45.0%
GACAACGAAGGTCTATTTGG+CGG + chr3.4:50686261-50686280 MS.gene73111:CDS 45.0%
GGTCAAATAAATTGGGACGG+AGG + chr3.4:50682678-50682697 MS.gene73111:intron 45.0%
TCCACCACACTTGTCACTAT+TGG + chr3.4:50684051-50684070 MS.gene73111:intron 45.0%
TCTGTGTGAAATGAGCCAAG+AGG + chr3.4:50682657-50682676 MS.gene73111:intron 45.0%
TCTTGCAGCTCTTCTACCAA+AGG + chr3.4:50681775-50681794 MS.gene73111:CDS 45.0%
TGCCCACCCATGAAAGAAAT+TGG - chr3.4:50682328-50682347 None:intergenic 45.0%
TGGCAAAGCTCTTCTCCAAA+AGG - chr3.4:50681693-50681712 None:intergenic 45.0%
TGTCTTCCTTCCACATCTAG+CGG + chr3.4:50686369-50686388 MS.gene73111:CDS 45.0%
TTTGATACCTTAGCACAGCG+GGG - chr3.4:50686120-50686139 None:intergenic 45.0%
! ACACTGGTAGTGATCTCACT+TGG + chr3.4:50685629-50685648 MS.gene73111:CDS 45.0%
! AGCTGCAAGAAGATGATGGT+AGG - chr3.4:50681765-50681784 None:intergenic 45.0%
! AGGGCTTGGTACTCCTAAAA+AGG + chr3.4:50685588-50685607 MS.gene73111:CDS 45.0%
! GTAGTCTGAAATTCGATCGG+AGG - chr3.4:50683150-50683169 None:intergenic 45.0%
! TGGGTGGGCATAATTTGTCA+CGG + chr3.4:50682338-50682357 MS.gene73111:intron 45.0%
! TGTTTGGCGTTTTCGCCAAA+TGG + chr3.4:50686804-50686823 MS.gene73111:CDS 45.0%
!! AGAAAGCACTAGGCACAAGA+TGG - chr3.4:50682385-50682404 None:intergenic 45.0%
!! CTGGTAGCCTTATTGGATCA+GGG + chr3.4:50685548-50685567 MS.gene73111:CDS 45.0%
!! GATGTTGGTGCTGGTAAGAT+TGG + chr3.4:50686888-50686907 MS.gene73111:CDS 45.0%
!! GCCAAATCTGGTAGCCTTAT+TGG + chr3.4:50685541-50685560 MS.gene73111:CDS 45.0%
!! TATTGGAGGCGCCAAATGTA+AGG - chr3.4:50686404-50686423 None:intergenic 45.0%
!! TCTGGTAGCCTTATTGGATC+AGG + chr3.4:50685547-50685566 MS.gene73111:CDS 45.0%
!!! AACTCTCCGGTCTTGTTTTG+AGG + chr3.4:50681998-50682017 MS.gene73111:intron 45.0%
!!! ACTCTCCGGTCTTGTTTTGA+GGG + chr3.4:50681999-50682018 MS.gene73111:intron 45.0%
!! ATATAATTCAATTAAAATTA+TGG - chr3.4:50684258-50684277 None:intergenic 5.0%
!!! TTTTTTATTTATTTAAAGAT+GGG - chr3.4:50682425-50682444 None:intergenic 5.0%
!!! TTTTTTTATTTATTTAAAGA+TGG - chr3.4:50682426-50682445 None:intergenic 5.0%
AAACGTCAGTGGTCGACATG+GGG + chr3.4:50684630-50684649 MS.gene73111:intron 50.0%
AAGCACTAGGCACAAGATGG+TGG - chr3.4:50682382-50682401 None:intergenic 50.0%
ACCACCGGAGGAGAAAATAG+AGG - chr3.4:50686535-50686554 None:intergenic 50.0%
ACGGCTAACTGTAGTGCCAA+CGG + chr3.4:50686203-50686222 MS.gene73111:CDS 50.0%
ACTCAGCTCTCATCAGCTAC+AGG + chr3.4:50685760-50685779 MS.gene73111:CDS 50.0%
AGCACTAGGCACAAGATGGT+GGG - chr3.4:50682381-50682400 None:intergenic 50.0%
ATTGAAACCGCTGGAGCAAC+TGG - chr3.4:50686651-50686670 None:intergenic 50.0%
GATGACGACCAAGGCCTAAT+AGG - chr3.4:50686296-50686315 None:intergenic 50.0%
GCACGGATATGGACACGATA+CGG + chr3.4:50685803-50685822 MS.gene73111:intron 50.0%
GCTAACCTACCAGCCAAATC+TGG + chr3.4:50685529-50685548 MS.gene73111:CDS 50.0%
GGTGACCAATCCTTCTCAGT+CGG + chr3.4:50686165-50686184 MS.gene73111:CDS 50.0%
GTCAGTTATTCCAGGACGGA+GGG - chr3.4:50682479-50682498 None:intergenic 50.0%
TCCCGGGGAAATTCCTTCTA+CGG + chr3.4:50686459-50686478 MS.gene73111:CDS 50.0%
TTCTACGGCCTTGACATTGC+CGG + chr3.4:50686474-50686493 MS.gene73111:CDS 50.0%
TTGATACCTTAGCACAGCGG+GGG - chr3.4:50686119-50686138 None:intergenic 50.0%
! AGGGAGTATGTGATGGTTGG+TGG - chr3.4:50682460-50682479 None:intergenic 50.0%
! GAAGTATCCAGTTGCTCCAG+CGG + chr3.4:50686641-50686660 MS.gene73111:CDS 50.0%
! GCTGAAGTATCCGACTGAGA+AGG - chr3.4:50686178-50686197 None:intergenic 50.0%
! GGGAGTATGTGATGGTTGGT+GGG - chr3.4:50682459-50682478 None:intergenic 50.0%
! TCCTCTATTTTCTCCTCCGG+TGG + chr3.4:50686531-50686550 MS.gene73111:CDS 50.0%
!! GGTGCTGGTAAGATTGGGTT+TGG + chr3.4:50686894-50686913 MS.gene73111:CDS 50.0%
!! GGTGGTGCCATTATTGACTC+TGG + chr3.4:50686549-50686568 MS.gene73111:CDS 50.0%
ACGACCAAGGCCTAATAGGC+CGG - chr3.4:50686292-50686311 None:intergenic 55.0%
ATCACATACTCCCTCCGTCC+TGG + chr3.4:50682466-50682485 MS.gene73111:intron 55.0%
ATCTCGGAGGCTAGCATAGG+CGG - chr3.4:50686601-50686620 None:intergenic 55.0%
CGGAGGCAGCCGTGTAATAA+CGG - chr3.4:50686577-50686596 None:intergenic 55.0%
GACATTGCCGGAATCAGCGT+TGG + chr3.4:50686486-50686505 MS.gene73111:CDS 55.0%
GCACTACAGTTAGCCGTTCG+CGG - chr3.4:50686200-50686219 None:intergenic 55.0%
GCCGTAGAAGGAATTTCCCC+GGG - chr3.4:50686463-50686482 None:intergenic 55.0%
GGAATCTCGGAGGCTAGCAT+AGG - chr3.4:50686604-50686623 None:intergenic 55.0%
GGCAATGTCAAGGCCGTAGA+AGG - chr3.4:50686475-50686494 None:intergenic 55.0%
GGCCGTAGAAGGAATTTCCC+CGG - chr3.4:50686464-50686483 None:intergenic 55.0%
GGCTACCAGATTTGGCTGGT+AGG - chr3.4:50685537-50685556 None:intergenic 55.0%
GGTCAGTTATTCCAGGACGG+AGG - chr3.4:50682480-50682499 None:intergenic 55.0%
GTCAATAATGGCACCACCGG+AGG - chr3.4:50686547-50686566 None:intergenic 55.0%
GTGCCAACGGATGCCATTGA+TGG + chr3.4:50686216-50686235 MS.gene73111:CDS 55.0%
TCGGATACTTCAGCCGCGAA+CGG + chr3.4:50686184-50686203 MS.gene73111:CDS 55.0%
! AGGACGGAGGGAGTATGTGA+TGG - chr3.4:50682467-50682486 None:intergenic 55.0%
! ATTGCCGGAATCAGCGTTGG+TGG + chr3.4:50686489-50686508 MS.gene73111:CDS 55.0%
! CACGTAAAGTATCCCTGGCG+CGG - chr3.4:50686766-50686785 None:intergenic 55.0%
! CGGAGGGAGTATGTGATGGT+TGG - chr3.4:50682463-50682482 None:intergenic 55.0%
! CTCGCCACGTAAAGTATCCC+TGG - chr3.4:50686771-50686790 None:intergenic 55.0%
! TTTCCTCGGTGGTGGTGTCA+CGG + chr3.4:50686731-50686750 MS.gene73111:CDS 55.0%
!! CGCTGATTCCGGCAATGTCA+AGG - chr3.4:50686485-50686504 None:intergenic 55.0%
!! GGCGTTGGCCACCTTACATT+TGG + chr3.4:50686390-50686409 MS.gene73111:CDS 55.0%
!! GGTTCCACCAACGCTGATTC+CGG - chr3.4:50686496-50686515 None:intergenic 55.0%
!! TAAGTGATGGGTGGCGCAGA+CGG + chr3.4:50684089-50684108 MS.gene73111:intron 55.0%
!! TGGAGGCGCCAAATGTAAGG+TGG - chr3.4:50686401-50686420 None:intergenic 55.0%
AAGTGACCCCCGCTGTGCTA+AGG + chr3.4:50686110-50686129 MS.gene73111:CDS 60.0%
CCAACGCCGCTAGATGTGGA+AGG - chr3.4:50686378-50686397 None:intergenic 60.0%
CCTTCCACATCTAGCGGCGT+TGG + chr3.4:50686375-50686394 MS.gene73111:CDS 60.0%
CGCGCCAGGGATACTTTACG+TGG + chr3.4:50686764-50686783 MS.gene73111:CDS 60.0%
GGTCTATTTGGCGGCTCAGC+CGG + chr3.4:50686270-50686289 MS.gene73111:CDS 60.0%
GGTTGCGGCCAAGACAACGA+AGG + chr3.4:50686249-50686268 MS.gene73111:CDS 60.0%
TCAGCCGGCCTATTAGGCCT+TGG + chr3.4:50686285-50686304 MS.gene73111:CDS 60.0%
! CTCCCTTTTCCACGGTCTCC+CGG + chr3.4:50686442-50686461 MS.gene73111:CDS 60.0%
! TCCCTTTTCCACGGTCTCCC+GGG + chr3.4:50686443-50686462 MS.gene73111:CDS 60.0%
ACGGTGGAAATAGCCGCGCC+AGG + chr3.4:50686750-50686769 MS.gene73111:CDS 65.0%
AGGCTAGCATAGGCGGTCGG+AGG - chr3.4:50686594-50686613 None:intergenic 65.0%
CCCCGGGAGACCGTGGAAAA+GGG - chr3.4:50686447-50686466 None:intergenic 65.0%
CGGAGGCTAGCATAGGCGGT+CGG - chr3.4:50686597-50686616 None:intergenic 65.0%
CGGTGGAAATAGCCGCGCCA+GGG + chr3.4:50686751-50686770 MS.gene73111:CDS 65.0%
GGAATTTCCCCGGGAGACCG+TGG - chr3.4:50686454-50686473 None:intergenic 65.0%
GTGGCCAACGCCGCTAGATG+TGG - chr3.4:50686382-50686401 None:intergenic 65.0%
TCCCCGGGAGACCGTGGAAA+AGG - chr3.4:50686448-50686467 None:intergenic 65.0%
! CCCTTTTCCACGGTCTCCCG+GGG + chr3.4:50686444-50686463 MS.gene73111:CDS 65.0%
CCACCGTGACACCACCACCG+AGG - chr3.4:50686737-50686756 None:intergenic 70.0%
GGCGGCTCAGCCGGCCTATT+AGG + chr3.4:50686279-50686298 MS.gene73111:CDS 70.0%
!! CCTCGGTGGTGGTGTCACGG+TGG + chr3.4:50686734-50686753 MS.gene73111:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 50681634 50686935 50681634 ID=MS.gene73111
chr3.4 mRNA 50681634 50686935 50681634 ID=MS.gene73111.t1;Parent=MS.gene73111
chr3.4 exon 50681634 50681796 50681634 ID=MS.gene73111.t1.exon1;Parent=MS.gene73111.t1
chr3.4 CDS 50681634 50681796 50681634 ID=cds.MS.gene73111.t1;Parent=MS.gene73111.t1
chr3.4 exon 50685302 50685781 50685302 ID=MS.gene73111.t1.exon2;Parent=MS.gene73111.t1
chr3.4 CDS 50685302 50685781 50685302 ID=cds.MS.gene73111.t1;Parent=MS.gene73111.t1
chr3.4 exon 50686109 50686935 50686109 ID=MS.gene73111.t1.exon3;Parent=MS.gene73111.t1
chr3.4 CDS 50686109 50686935 50686109 ID=cds.MS.gene73111.t1;Parent=MS.gene73111.t1
Gene Sequence

>MS.gene73111

ATGGCTTTCCAAATTTCTCATTTCTTCCTAGTTTCTCTTGCTCTCTTTTTCTTTTGCCTTTTGGAGAAGAGCTTTGCCATTGAAAGAACATTGGAGGGAAGACACCATCTTGTTCAAATCAGCTCTCTCCTACCATCATCTTCTTGCAGCTCTTCTACCAAAGGTCAATATATTTAATCATACATGCATTGCTAGCAAATTTTATTGATTTATTGTTAATTTCTACCAAATAAATTGAGCTACAGAATAGCTATAAAATAGATACATAATTTGCAGTGGCATAAATTAAATGACAACTTAATTAGATTAATATTGTTTCCAATTATTTGTAATTAATGTCGGTATATAGCATATGGTACACATAAACTCTCCGGTCTTGTTTTGAGGGTTATAGTAACTAAATAATCAGTGTCATGTTTGAAGGTCATAGTAACTAAATAATTAGTGTGAGTAAGAAACACTTGATATGTTAAGCATGCAATACCCTGCATCTTGTACGCACTAATTAATGTGTAAGTTTGGCTTGTCACACTCTTTGACAAAAAAAATATTAAACAACCAATTCATTGGAAAAATTATAAAATGGAGGAAATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAATTATTTGTTTGATATACCATAAAAAAGAAAGAGAAAATGAGCAATTCTGCCAATTTCTTTCATGGGTGGGCATAATTTGTCACGGAGAATATTCACATGGAACCCACCATCTTGTGCCTAGTGCTTTCTCAACCAATAAAATGGAACCCATCTTTAAATAAATAAAAAAAAAAAAAAAAACCCACCAACCATCACATACTCCCTCCGTCCTGGAATAACTGACCCATTTTCTAAAAAAAAGTGTCCCAAAATAACTGACTCATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACACTAAATAATACTACTTTTATCATTCCCAATACAATATATTCCACTTTCCCCTTTATTTATACATTTTTCTTAATCTGTGTGAAATGAGCCAAGAGGTCAAATAAATTGGGACGGAGGGAGTATTAAAGATAGGAAAAAGGAACAAAAGCCAGCTGCCACTCATACATTTCTTGTTTGATTAATCGTTTTTATTCATATTAGAAAGTAATATTAAATTTTTTACTTTATTAAGAATATGTGTGTGTATACACACACACAAACAAATGTAGACAACACTTGAGTTATTTACATACGAAAATTAAAAATGCCCGTTTCTCAATTGATATATTTGAATAGAATGCTATAATAAACTTATTAGAAAGTAATATTAAATTTTTTACTTTATTAAGAATATGTGTGTGTATACACACACACAAACAAATGTAGACAACACTTGAGTTATTTACATACGAAAATTAAAAATGCCCGTTTCTCAATTGATATATTTGAATAGAATGCTATAATAAACTTATTAACATGAAAAATTTAACACCAAAAACCGATCAATTCATTTATTTTATTTACCTCCGATCGAATTTCAGACTACTAGGACCATTTTCTTGAAAATGGTAGGGTTAAGAAAAAAAAAATTGTGCAAGTTTTTTTTTTTTTTTGACAAAAAATTGTAAAAGTTGTTATCACCACAAAAATAATGCATTTATTGTTTTTTTCTCCTCCATAGTTTATACTAGTATGGACAAAATGATAAGTTTATAATCACGGGTCTTCATGAACAACATTAATACATAGACACAAATATTGACTATGAAAGAATCTCATTCACGGGTCAGTGATCACGATTATAATTTGTGGCTAAACTCGGTGATTGATCAATTATAGCATTGTATATTTTTTTGGAGGGATATAGTATAGCATTGTATTTTGTTGATTTATAGGTACAAACTTAGTATTTCAACAGAAAAAAACAATATTCATTCACGTTTGGTACCAACCCACTAAAGTTAATAAACAAATAACAAGTGGCTAGTTTTCATTTTAGCTACACGTCACGGTTTTCTACCCAACTAGCTATTATTTATTTTAGGCAAACTTTATATTAGATGAAGATATTGACAAAATTTGGCCAAAAGATCTTGAGATGGAAAGATGTGTAAAATCTTGACGTGTATTTTCCAATTTACATTGTCGTAAAGAAATAAAAGAAACTAAAATATTTGTGGACTTTAGTCAATGATTTAACTAGATGGGGATACAATTAATTGTATCATAGTGTATAAGAGAATTAATCTATTGCTTCTTGTAATTACTTGTCACCTTAAATTTTTGTATCTAGTAGCCTTATAAAATTACTTATAAAAGAAAAGTGACTCTTTTTGTAAACTCTTATAAAAACTTTATATATTTTCCATGTGGAAAATGTATTTTCTCAATACAACCAATTGACACTTGAGGTTTTTCGAATACACATCCACCACACTTGTCACTATTGGTTTTGTGAATGAATATAAGTGATGGGTGGCGCAGACGGATAGAACATATATCATATTCGATTGTGGGTTGAGTTTAATTCAACTTTAGAAAATCAACCTATATATTTCGATGTGAGACTTGAGTTTTTTTTTTAAGTGGGATATGAATTTTTTAAAAAACATCAAGAGCACTCCGATTAATCCATAATTTTAATTGAATTATATCTTTTTTTTTGTTTAAACAGAAAACTAATTTTATTAATGATCAATACAAGCACAATCACAAGGTGTGCAAGTAAAGACACAAAAGTACAAATGAAAACAACAAGCACCAATACTTGACAATACTAGATGGCACTTCACACTTTGCATTTATTCAATTTCAATATCAACTTGTAAGGTTCTTATTCGAATCAGATACAAATCAGCACATTAATATTTTACTGAATTAGAACGTTGATTAATAGAGGTGTAGAAATTGATGACCATGCCTTCAATTACAATTAGGAACACTACTACCATACATGCATGAAATAATGTATTTGAGTAGTACTCAATCTCATCCAACAAGAAAGAAAAACGTCAGTGGTCGACATGGGGAAGCTAGAAGTTAGAAAAAAGATAATTTTTTAATGCAAAACTATATTAAATTTTATTATGTGGTATTTAGTTATATGTACCTAACTAATAATAGAAAACAATTATTGGTGGGTATAAATAACCCTTTCACTTGTGATATAAGTATAACCAACTCAAGATAAGATTTTGTCTTTGAGTCCTTGAGAGATATGTTTCCAATACCTCTAGATTCCTTGGTATAGTCTCATCCATATATTATCAAGTATTCTCATATATTCCATAAAAAAAAAAAAAAATCTCATATATAAACGTATATTTTTAATTTAACAGAAGAATCGAATTTATGAGTTACCTTTTTTTTAGGGCAACTTCTAGAATTATATATTTTTAATTCGACTTTATTTCTAATAATGTTGTATGGATGTCATTATTCAATATAAGAAACGTTTTTAGACAATGATATCATTTTTTTAATTGACTTTTTCTCTTCTAGAATCTAGCCAACATTGAGACTTGATGCATCTGATACAGTATATAGGGTGTTTGATATTTGTGTATTATGCAATATATGACATTACCTTGATGAATAGACTTGTATTATTGATTTTAACGTAGTAGTTAAGCAACAATAATTTGACACCACTAAACATGTTTCATTGTTCAAATTCAGGTTCCAAAACAAAAGCATCATTAGATGTGTTACACAAACATGGGCCATGTTCCCAACTGAATAATGGAAAAGCAAAAATTCTTCCAACACACAGTGATATTCTTGATCATGACAAAGAAAGGGTGAATTATATTCACTCCAAATTATTATCATCTAAGAATAATATTAATTTGGAGGGATTTATGGATTCTAAATCTAAATCTAAATCAATTAAATCACGTAAATCAGCTAACCTACCAGCCAAATCTGGTAGCCTTATTGGATCAGGGAACTATTTTGTTGTTGTAGGGCTTGGTACTCCTAAAAAGGATTTGTCACTTATTTTTGACACTGGTAGTGATCTCACTTGGACTCAATGTCAACCTTGTGTTGGTTCTTGCTACAAGCAACAAGATGAAATTTTTGATCCATCAAAGTCTACTTCTTATTACAATATCACTTGCACTTCTTCAGATTGCACTCAGCTCTCATCAGCTACAGGTATATATTATTATCTTTGAAGCACGGATATGGACACGATACGGACACTGACACACCGACACAGCTAATAATTTGAAAAAATCACATATAATTCAGTGTGATTACAAGTGTCAGTGTCGGACATGTACGCTTAATCGAAGAATTGTCCGTGCTTCATAGATTATTATATTATAATTATACTATAACGATTAAAGAATCTGTTATATTATAATGATTAAATTTTTTTTTTTTGAAGAAATGATTAAAAAAAATTATTTACTTGTTTTGTTACATTATTATTTTTATAGGGAAATTAATTTCATTCCCAAAAAATCATTATTATTACAGGAAGTGACCCCCGCTGTGCTAAGGTATCAAATGCATGTGTATATGGCATCCAATATGGTGACCAATCCTTCTCAGTCGGATACTTCAGCCGCGAACGGCTAACTGTAGTGCCAACGGATGCCATTGATGGTTTTTTATTTGGTTGCGGCCAAGACAACGAAGGTCTATTTGGCGGCTCAGCCGGCCTATTAGGCCTTGGTCGTCATCCAATCTCATTCGTCCAACAAACATCTCAAAAATACCAAAAAACTTTCTCGTATTGTCTTCCTTCCACATCTAGCGGCGTTGGCCACCTTACATTTGGCGCCTCCAATAATAAGTACGTAAAATACACTCCCTTTTCCACGGTCTCCCGGGGAAATTCCTTCTACGGCCTTGACATTGCCGGAATCAGCGTTGGTGGAACCAAGCTTCCAATCTCATCCTCTATTTTCTCCTCCGGTGGTGCCATTATTGACTCTGGTACCGTTATTACACGGCTGCCTCCGACCGCCTATGCTAGCCTCCGAGATTCCTTCAAGAAAGGCATGACGAAGTATCCAGTTGCTCCAGCGGTTTCAATTTTAGACACATGCTATGATCTTAGCGGGTACAAGATTGTTTCCATTCCGAAGATTAGTTTTTTCCTCGGTGGTGGTGTCACGGTGGAAATAGCCGCGCCAGGGATACTTTACGTGGCGAGTTTGAAGCAAGCTTGTTTGGCGTTTTCGCCAAATGGAGATGATAGTGATATTACTATCTTTGGGAATGTGCAACAAAGAACACTAGAGGTTGTTTATGATGTTGGTGCTGGTAAGATTGGGTTTGGATCAAATGGTTGCGAGTGA
Protein sequence

>MS.gene73111.t1

MAFQISHFFLVSLALFFFCLLEKSFAIERTLEGRHHLVQISSLLPSSSCSSSTKGSKTKASLDVLHKHGPCSQLNNGKAKILPTHSDILDHDKERVNYIHSKLLSSKNNINLEGFMDSKSKSKSIKSRKSANLPAKSGSLIGSGNYFVVVGLGTPKKDLSLIFDTGSDLTWTQCQPCVGSCYKQQDEIFDPSKSTSYYNITCTSSDCTQLSSATGSDPRCAKVSNACVYGIQYGDQSFSVGYFSRERLTVVPTDAIDGFLFGCGQDNEGLFGGSAGLLGLGRHPISFVQQTSQKYQKTFSYCLPSTSSGVGHLTFGASNNKYVKYTPFSTVSRGNSFYGLDIAGISVGGTKLPISSSIFSSGGAIIDSGTVITRLPPTAYASLRDSFKKGMTKYPVAPAVSILDTCYDLSGYKIVSIPKISFFLGGGVTVEIAAPGILYVASLKQACLAFSPNGDDSDITIFGNVQQRTLEVVYDVGAGKIGFGSNGCE