Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73308.t1 | XP_013454883.1 | 99.6 | 487 | 2 | 0 | 1 | 487 | 1 | 487 | 1.60E-281 | 978 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73308.t1 | Q9M6N7 | 73.3 | 483 | 117 | 2 | 6 | 487 | 4 | 475 | 9.0e-209 | 727.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73308.t1 | A0A072UHP1 | 99.6 | 487 | 2 | 0 | 1 | 487 | 1 | 487 | 1.1e-281 | 978.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061188 | MS.gene73308 | 0.806104 | 9.67E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73308.t1 | MTR_4g017820 | 99.589 | 487 | 2 | 0 | 1 | 487 | 1 | 487 | 0.0 | 982 |
| MS.gene73308.t1 | MTR_7g069640 | 84.631 | 488 | 73 | 2 | 1 | 487 | 1 | 487 | 0.0 | 810 |
| MS.gene73308.t1 | MTR_8g095040 | 71.186 | 472 | 130 | 2 | 2 | 467 | 8 | 479 | 0.0 | 649 |
| MS.gene73308.t1 | MTR_1g036410 | 61.728 | 486 | 157 | 6 | 12 | 487 | 14 | 480 | 0.0 | 568 |
| MS.gene73308.t1 | MTR_8g074750 | 58.248 | 491 | 166 | 9 | 5 | 481 | 6 | 471 | 0.0 | 536 |
| MS.gene73308.t1 | MTR_7g115050 | 54.082 | 490 | 189 | 8 | 1 | 475 | 1 | 469 | 1.34e-180 | 514 |
| MS.gene73308.t1 | MTR_1g045550 | 27.386 | 482 | 279 | 17 | 22 | 466 | 48 | 495 | 5.76e-23 | 102 |
| MS.gene73308.t1 | MTR_1g079760 | 27.044 | 477 | 279 | 17 | 22 | 463 | 47 | 489 | 6.84e-21 | 95.9 |
| MS.gene73308.t1 | MTR_7g098930 | 24.948 | 477 | 287 | 15 | 22 | 463 | 47 | 487 | 1.18e-15 | 79.7 |
| MS.gene73308.t1 | MTR_3g463730 | 23.374 | 492 | 285 | 14 | 23 | 470 | 14 | 457 | 7.28e-15 | 77.0 |
| MS.gene73308.t1 | MTR_7g113340 | 25.417 | 480 | 277 | 18 | 22 | 461 | 47 | 485 | 1.13e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73308.t1 | AT2G38290 | 73.292 | 483 | 117 | 2 | 6 | 487 | 4 | 475 | 0.0 | 712 |
| MS.gene73308.t1 | AT2G38290 | 76.045 | 359 | 85 | 1 | 130 | 487 | 1 | 359 | 0.0 | 542 |
| MS.gene73308.t1 | AT1G64780 | 25.546 | 458 | 282 | 12 | 22 | 449 | 52 | 480 | 2.79e-22 | 100 |
| MS.gene73308.t1 | AT4G13510 | 26.216 | 473 | 282 | 14 | 22 | 461 | 42 | 480 | 3.67e-22 | 99.8 |
| MS.gene73308.t1 | AT3G24300 | 26.240 | 484 | 274 | 17 | 22 | 464 | 46 | 487 | 2.77e-21 | 97.1 |
| MS.gene73308.t1 | AT3G24290 | 26.030 | 461 | 271 | 12 | 22 | 448 | 46 | 470 | 1.73e-19 | 91.7 |
| MS.gene73308.t1 | AT4G28700 | 26.464 | 461 | 272 | 14 | 22 | 448 | 51 | 478 | 8.59e-19 | 89.4 |
Find 130 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCTGACTCATAAATTTA+TGG | 0.137091 | 4.1:-79801035 | None:intergenic |
| GTGGATTCACTGCAGCTTAT+TGG | 0.194340 | 4.1:+79797707 | MS.gene73308:CDS |
| TTAAAGAAGTGAGTGCTTTC+AGG | 0.207177 | 4.1:-79797409 | None:intergenic |
| TATGTTATTCATCTTTCTTC+TGG | 0.220707 | 4.1:+79797679 | MS.gene73308:CDS |
| TTCAGTGATTGGAGCTGTTC+AGG | 0.233610 | 4.1:+79798376 | MS.gene73308:CDS |
| TTCTTGGAAGAATGAATATT+AGG | 0.252042 | 4.1:+79797542 | MS.gene73308:CDS |
| ACTTTGGATGTTGCTTTCTT+TGG | 0.270509 | 4.1:+79798347 | MS.gene73308:CDS |
| AATTCAAGGGGAGCCTTCTA+TGG | 0.272145 | 4.1:+79800731 | MS.gene73308:CDS |
| ATTCATCTTTCTTCTGGAAT+TGG | 0.280645 | 4.1:+79797685 | MS.gene73308:CDS |
| CGAGGAAGCTTATGCACTTT+GGG | 0.285767 | 4.1:+79800916 | MS.gene73308:CDS |
| TTGTTATGGATGGGTTGGTC+AGG | 0.299723 | 4.1:+79798227 | MS.gene73308:CDS |
| TGGATTCACTGCAGCTTATT+GGG | 0.318741 | 4.1:+79797708 | MS.gene73308:CDS |
| TTATGTTACCGTATGGCCTT+TGG | 0.319892 | 4.1:+79797310 | MS.gene73308:CDS |
| GGCTATGAATTCAGCTTTCA+TGG | 0.322861 | 4.1:+79797246 | MS.gene73308:CDS |
| GAAGTATCACCCTATGTTAC+TGG | 0.331682 | 4.1:+79800998 | MS.gene73308:CDS |
| CTGTGAGGAGGCCTCCTAAA+AGG | 0.337602 | 4.1:-79800661 | None:intergenic |
| TTTGGTAAGCCTTCAGTGAT+TGG | 0.339494 | 4.1:+79798365 | MS.gene73308:CDS |
| AGCATAAGCAATACATTGTT+TGG | 0.347245 | 4.1:-79798191 | None:intergenic |
| TATGTTACCGTATGGCCTTT+GGG | 0.358629 | 4.1:+79797311 | MS.gene73308:CDS |
| TTGTTAGCTGGATCTGTTCT+TGG | 0.363722 | 4.1:+79797526 | MS.gene73308:CDS |
| GGTGCACCTTTACCCCAAAA+TGG | 0.365974 | 4.1:-79797346 | None:intergenic |
| TCTTGGAAGAATGAATATTA+GGG | 0.369907 | 4.1:+79797543 | MS.gene73308:CDS |
| ATAGTGATGGGAATACTATC+TGG | 0.375245 | 4.1:+79799513 | MS.gene73308:CDS |
| TGCATCAGTATTAATATGTT+GGG | 0.379301 | 4.1:+79797282 | MS.gene73308:CDS |
| GCCGCCGCCATGCCCATAGA+AGG | 0.393092 | 4.1:-79800744 | None:intergenic |
| TGGGGTGTCATTGATTTCTC+TGG | 0.400224 | 4.1:+79797652 | MS.gene73308:CDS |
| CATCTTTCTTCTGGAATTGG+TGG | 0.415049 | 4.1:+79797688 | MS.gene73308:CDS |
| ATGCATCAGTATTAATATGT+TGG | 0.417731 | 4.1:+79797281 | MS.gene73308:CDS |
| ATAGAAGGCTCCCCTTGAAT+TGG | 0.424952 | 4.1:-79800729 | None:intergenic |
| GCCTTCTATGGGCATGGCGG+CGG | 0.425599 | 4.1:+79800743 | MS.gene73308:CDS |
| GCTTATGCACTTTGGGGTGA+TGG | 0.431224 | 4.1:+79800923 | MS.gene73308:CDS |
| GAAGAATGAATATTAGGGCT+TGG | 0.432764 | 4.1:+79797548 | MS.gene73308:CDS |
| GGTAAAGGTGCACCATCATT+AGG | 0.433108 | 4.1:+79797355 | MS.gene73308:CDS |
| GTTTGCATCACTCCTGGAGC+AGG | 0.433827 | 4.1:+79798416 | MS.gene73308:CDS |
| TCAGTGATTGGAGCTGTTCA+GGG | 0.436259 | 4.1:+79798377 | MS.gene73308:CDS |
| GCGAGGAAGCTTATGCACTT+TGG | 0.438004 | 4.1:+79800915 | MS.gene73308:CDS |
| GATGAGGATCCATGCTTAGT+TGG | 0.439794 | 4.1:-79800959 | None:intergenic |
| ATGAGGATCCATGCTTAGTT+GGG | 0.442073 | 4.1:-79800958 | None:intergenic |
| TCAGTTCTTGAAGCAATTAG+TGG | 0.444371 | 4.1:+79800769 | MS.gene73308:CDS |
| GGCCAAGGTTGAAGAGTGAT+AGG | 0.447646 | 4.1:+79798156 | MS.gene73308:CDS |
| TGGCAGGGCTTGTGCAGTCA+TGG | 0.448163 | 4.1:+79799484 | MS.gene73308:intron |
| TCTTTGCAGACTCATATTGC+CGG | 0.453439 | 4.1:+79800703 | MS.gene73308:CDS |
| TGTTATGGATGGGTTGGTCA+GGG | 0.456410 | 4.1:+79798228 | MS.gene73308:CDS |
| TCCCTATCACTCTTCAACCT+TGG | 0.457019 | 4.1:-79798158 | None:intergenic |
| AGCACTCACTTCTTTAAGAA+TGG | 0.457127 | 4.1:+79797415 | MS.gene73308:CDS |
| GGACTTGTTTGCATCACTCC+TGG | 0.458843 | 4.1:+79798410 | MS.gene73308:CDS |
| GAAGTCAACTCTTCTACAAA+AGG | 0.471992 | 4.1:+79799572 | MS.gene73308:CDS |
| TCGAACGACCAGCTCGAGAC+TGG | 0.475810 | 4.1:+79800875 | MS.gene73308:CDS |
| CAGGATTGTTATGGATGGGT+TGG | 0.479032 | 4.1:+79798222 | MS.gene73308:CDS |
| AATGAATATTAGGGCTTGGA+TGG | 0.483014 | 4.1:+79797552 | MS.gene73308:CDS |
| TTGCTTATGCTAGCAGGTGC+AGG | 0.486246 | 4.1:+79798203 | MS.gene73308:CDS |
| GAGTCAATGTTTGCTGCATA+TGG | 0.486969 | 4.1:-79798266 | None:intergenic |
| GCATGCTTTGTAGACCAACT+AGG | 0.489380 | 4.1:-79797180 | None:intergenic |
| TCTCCTAGTGTGGACCACTT+TGG | 0.497317 | 4.1:+79798331 | MS.gene73308:CDS |
| AATGTATTGCTTATGCTAGC+AGG | 0.508189 | 4.1:+79798197 | MS.gene73308:CDS |
| GTAGAAGAGTTGACTTCTTG+TGG | 0.508479 | 4.1:-79799566 | None:intergenic |
| ATGGGTTGGTCAGGGTTCAA+TGG | 0.509849 | 4.1:+79798236 | MS.gene73308:CDS |
| GTTGGTCTACAAAGCATGCC+AGG | 0.511038 | 4.1:+79797184 | MS.gene73308:CDS |
| TATTGCCGGTGACCAATTCA+AGG | 0.517642 | 4.1:+79800717 | MS.gene73308:CDS |
| GGCAGGGCTTGTGCAGTCAT+GGG | 0.521391 | 4.1:+79799485 | MS.gene73308:intron |
| AATATGAGTCTGCAAAGATC+TGG | 0.521520 | 4.1:-79800698 | None:intergenic |
| TAGCAGGTGCAGGATTGTTA+TGG | 0.525281 | 4.1:+79798213 | MS.gene73308:CDS |
| TTTATAGACAAACCTGCTCC+AGG | 0.525389 | 4.1:-79798428 | None:intergenic |
| ACCTCTTGCCCCAGTAACAT+AGG | 0.525904 | 4.1:-79801008 | None:intergenic |
| GGTTGGTCAGGGTTCAATGG+TGG | 0.529011 | 4.1:+79798239 | MS.gene73308:CDS |
| AGGTGCAGGATTGTTATGGA+TGG | 0.529331 | 4.1:+79798217 | MS.gene73308:CDS |
| TCTCCTTTGTTTAGCCATTG+TGG | 0.531344 | 4.1:-79797130 | None:intergenic |
| CCCTATGTTACTGGGGCAAG+AGG | 0.535754 | 4.1:+79801007 | MS.gene73308:CDS |
| ATGACAGCATCAACCCTAGT+TGG | 0.538896 | 4.1:+79797166 | MS.gene73308:CDS |
| AAGTATCACCCTATGTTACT+GGG | 0.541502 | 4.1:+79800999 | MS.gene73308:CDS |
| TTTAGCCATTGTGGTGATGA+AGG | 0.544202 | 4.1:-79797121 | None:intergenic |
| CATCCAAAGTGGTCCACACT+AGG | 0.544890 | 4.1:-79798334 | None:intergenic |
| TATTCCATGGTGGACTATGA+TGG | 0.546570 | 4.1:+79799539 | MS.gene73308:CDS |
| CATGCTTTGTAGACCAACTA+GGG | 0.550313 | 4.1:-79797179 | None:intergenic |
| TAAGAGAAAATGAGCCAAAG+AGG | 0.550720 | 4.1:-79797583 | None:intergenic |
| TAAGCAATACATTGTTTGGT+GGG | 0.551524 | 4.1:-79798187 | None:intergenic |
| TTTCACACACATGCTGTGGC+CGG | 0.552024 | 4.1:+79800638 | MS.gene73308:CDS |
| GGTGTCATTGATTTCTCTGG+TGG | 0.552125 | 4.1:+79797655 | MS.gene73308:CDS |
| TAGTGATGGGAATACTATCT+GGG | 0.552494 | 4.1:+79799514 | MS.gene73308:CDS |
| AAGTATGACCCAACTAAGCA+TGG | 0.559295 | 4.1:+79800950 | MS.gene73308:CDS |
| GCTCTTGGTATGCTGTTGGA+AGG | 0.561258 | 4.1:-79797093 | None:intergenic |
| ATGTTACCGTATGGCCTTTG+GGG | 0.561815 | 4.1:+79797312 | MS.gene73308:CDS |
| GCTGTTCAGGGTATGATGAC+AGG | 0.562744 | 4.1:+79798389 | MS.gene73308:CDS |
| GTGATGAAGGAAGGTGCTCT+TGG | 0.563434 | 4.1:-79797108 | None:intergenic |
| TACTATCTGGGAGTATTCCA+TGG | 0.563931 | 4.1:+79799526 | MS.gene73308:CDS |
| ATTCAAGGGGAGCCTTCTAT+GGG | 0.564319 | 4.1:+79800732 | MS.gene73308:CDS |
| ATAAGCAATACATTGTTTGG+TGG | 0.568631 | 4.1:-79798188 | None:intergenic |
| GAAGAGAAGAATTAGTGTGG+TGG | 0.570040 | 4.1:-79800825 | None:intergenic |
| CTCTTGGTATGCTGTTGGAA+GGG | 0.571295 | 4.1:-79797092 | None:intergenic |
| CTGGTCGTTCGACATCCTCA+AGG | 0.571654 | 4.1:-79800864 | None:intergenic |
| AGGTGCTCTTGGTATGCTGT+TGG | 0.575427 | 4.1:-79797097 | None:intergenic |
| GTTCATCCCCAAAGGCCATA+CGG | 0.580875 | 4.1:-79797318 | None:intergenic |
| CATCATCGCCAGTCTCGAGC+TGG | 0.582123 | 4.1:-79800883 | None:intergenic |
| TCATGGGCAGCTATAGTGAT+GGG | 0.585092 | 4.1:+79799501 | MS.gene73308:CDS |
| AGGGGAGCCTTCTATGGGCA+TGG | 0.589588 | 4.1:+79800737 | MS.gene73308:CDS |
| CTGCAACTAGTCTCCTAGTG+TGG | 0.595858 | 4.1:+79798321 | MS.gene73308:CDS |
| GTCATGGGCAGCTATAGTGA+TGG | 0.598047 | 4.1:+79799500 | MS.gene73308:CDS |
| GCTCCCCTTGAATTGGTCAC+CGG | 0.599961 | 4.1:-79800722 | None:intergenic |
| ACACAGGTAGATGACACCCT+TGG | 0.601482 | 4.1:+79800611 | MS.gene73308:intron |
| GAGGAGGCCTCCTAAAAGGC+CGG | 0.601994 | 4.1:-79800657 | None:intergenic |
| CCTCTTGCCCCAGTAACATA+GGG | 0.604247 | 4.1:-79801007 | None:intergenic |
| GAGGAAGCTTATGCACTTTG+GGG | 0.606601 | 4.1:+79800917 | MS.gene73308:CDS |
| GGAGCCTTCTATGGGCATGG+CGG | 0.613135 | 4.1:+79800740 | MS.gene73308:CDS |
| AAATAAACAAGTGAAGCCAT+AGG | 0.617576 | 4.1:-79797472 | None:intergenic |
| GCCATTGTGGTGATGAAGGA+AGG | 0.619330 | 4.1:-79797117 | None:intergenic |
| ATTGCCGGTGACCAATTCAA+GGG | 0.630938 | 4.1:+79800718 | MS.gene73308:CDS |
| GCCAAGGTTGAAGAGTGATA+GGG | 0.631315 | 4.1:+79798157 | MS.gene73308:CDS |
| AAAGAAAGCAACATCCAAAG+TGG | 0.635054 | 4.1:-79798345 | None:intergenic |
| TGTAATCCTCTATGCAAGCA+TGG | 0.635068 | 4.1:+79797210 | MS.gene73308:CDS |
| TAAACAAAGGAGACAACTCA+TGG | 0.635470 | 4.1:+79797140 | MS.gene73308:CDS |
| TATGAAGAGAAGAATTAGTG+TGG | 0.639971 | 4.1:-79800828 | None:intergenic |
| GCATAGAGGATTACAAGACC+TGG | 0.642693 | 4.1:-79797202 | None:intergenic |
| TACAACTGTTCATACCCTTG+AGG | 0.646650 | 4.1:+79800849 | MS.gene73308:CDS |
| TGGTCGTTCGACATCCTCAA+GGG | 0.648802 | 4.1:-79800863 | None:intergenic |
| TGAACAGCTCCAATCACTGA+AGG | 0.650438 | 4.1:-79798374 | None:intergenic |
| CTGCTAAGAGACCTGTGAGG+AGG | 0.651843 | 4.1:-79800673 | None:intergenic |
| GGTGCAGGATTGTTATGGAT+GGG | 0.652332 | 4.1:+79798218 | MS.gene73308:CDS |
| TCACCACAATGGCTAAACAA+AGG | 0.669086 | 4.1:+79797127 | MS.gene73308:CDS |
| ACTGGCGATGATGCTGTACA+CGG | 0.672487 | 4.1:+79800893 | MS.gene73308:CDS |
| CGATGATGCTGTACACGGCG+AGG | 0.679210 | 4.1:+79800898 | MS.gene73308:CDS |
| ACCTTCCTTCATCACCACAA+TGG | 0.681471 | 4.1:+79797116 | MS.gene73308:CDS |
| AGTGTTTCACACACATGCTG+TGG | 0.682031 | 4.1:+79800634 | MS.gene73308:CDS |
| GAAGAGTTGACTTCTTGTGG+AGG | 0.685329 | 4.1:-79799563 | None:intergenic |
| TTGCCGGTGACCAATTCAAG+GGG | 0.686365 | 4.1:+79800719 | MS.gene73308:CDS |
| ATGTGTGTGAAACACTCCAA+GGG | 0.695193 | 4.1:-79800627 | None:intergenic |
| AGGACCATCATAGTCCACCA+TGG | 0.707593 | 4.1:-79799543 | None:intergenic |
| AGTATCACCCTATGTTACTG+GGG | 0.715721 | 4.1:+79801000 | MS.gene73308:CDS |
| CATGTGTGTGAAACACTCCA+AGG | 0.722123 | 4.1:-79800628 | None:intergenic |
| TATCTGGGAGTATTCCATGG+TGG | 0.732232 | 4.1:+79799529 | MS.gene73308:CDS |
| GTTCTGCTAAGAGACCTGTG+AGG | 0.819277 | 4.1:-79800676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGATTAAATAATTACAAA+AGG | + | chr4.1:79800307-79800326 | MS.gene73308:intron | 10.0% |
| !! | TATATAGTTAATTCATATAA+TGG | - | chr4.1:79800586-79800605 | None:intergenic | 10.0% |
| !!! | ACAATAATATTACTATTTTA+GGG | - | chr4.1:79799025-79799044 | None:intergenic | 10.0% |
| !!! | GTATTATATATTTTAGAATT+TGG | + | chr4.1:79800102-79800121 | MS.gene73308:intron | 10.0% |
| !!! | GTATTTTATATTTTAGAATT+TGG | + | chr4.1:79799895-79799914 | MS.gene73308:intron | 10.0% |
| !!! | TTGTTTTTCATTTTATTTTT+TGG | - | chr4.1:79800061-79800080 | None:intergenic | 10.0% |
| !! | AAATTATTAAGGAAAAAAAG+TGG | - | chr4.1:79800193-79800212 | None:intergenic | 15.0% |
| !! | ACAAAAGGATATTATTTATT+GGG | + | chr4.1:79800322-79800341 | MS.gene73308:intron | 15.0% |
| !! | AGAATCAAATTATCTAATTA+AGG | - | chr4.1:79799657-79799676 | None:intergenic | 15.0% |
| !! | ATTCTTAAAATAAAGAAAAG+AGG | - | chr4.1:79799631-79799650 | None:intergenic | 15.0% |
| !! | GCTCAAAAATAAAATTATTA+AGG | - | chr4.1:79800204-79800223 | None:intergenic | 15.0% |
| !! | TACAAAAGGATATTATTTAT+TGG | + | chr4.1:79800321-79800340 | MS.gene73308:intron | 15.0% |
| !! | TATAATCAATAATTGATCAT+AGG | - | chr4.1:79798476-79798495 | None:intergenic | 15.0% |
| !! | TATAATTCAATTGATAGATA+CGG | + | chr4.1:79799964-79799983 | MS.gene73308:intron | 15.0% |
| !! | TGTCAAAAAAAAAAATTACA+AGG | - | chr4.1:79800257-79800276 | None:intergenic | 15.0% |
| !! | TGTTATAGTATAGTATATAT+TGG | + | chr4.1:79799431-79799450 | MS.gene73308:intron | 15.0% |
| !!! | AACTTCAAACATAATTTTTA+AGG | - | chr4.1:79799228-79799247 | None:intergenic | 15.0% |
| !!! | AATATTATCAACCAATATTT+TGG | - | chr4.1:79799766-79799785 | None:intergenic | 15.0% |
| !!! | AATTTTGTTTGTTTTTTTCT+AGG | + | chr4.1:79798130-79798149 | MS.gene73308:intron | 15.0% |
| !!! | ACATTAATGTTACTATTTTA+GGG | - | chr4.1:79799069-79799088 | None:intergenic | 15.0% |
| !!! | ACTTCAAACATAATTTTTAA+GGG | - | chr4.1:79799227-79799246 | None:intergenic | 15.0% |
| !!! | AGTAATATCATTTAAACTTT+TGG | + | chr4.1:79799176-79799195 | MS.gene73308:intron | 15.0% |
| !!! | CACAATAATATTACTATTTT+AGG | - | chr4.1:79799026-79799045 | None:intergenic | 15.0% |
| !!! | TATCTTTTTTATAAATGAAG+AGG | - | chr4.1:79800355-79800374 | None:intergenic | 15.0% |
| !! | AAAAACAAACAAAATTGACT+AGG | - | chr4.1:79798126-79798145 | None:intergenic | 20.0% |
| !! | ATCAAATTATCTAATTAAGG+TGG | - | chr4.1:79799654-79799673 | None:intergenic | 20.0% |
| !! | CATCATTGTGTATTTAAATT+TGG | + | chr4.1:79798586-79798605 | MS.gene73308:intron | 20.0% |
| !! | GAATCAGATGTATATTTATT+AGG | - | chr4.1:79798997-79799016 | None:intergenic | 20.0% |
| !! | GTAAGATTTGATATTTGATA+TGG | - | chr4.1:79800161-79800180 | None:intergenic | 20.0% |
| !! | TAGATAATTTGATTCTTTAG+TGG | + | chr4.1:79799661-79799680 | MS.gene73308:intron | 20.0% |
| !! | TAGTTAATTCATATAATGGT+AGG | - | chr4.1:79800582-79800601 | None:intergenic | 20.0% |
| !! | TATTATTGTTGGTATTATGT+TGG | + | chr4.1:79798935-79798954 | MS.gene73308:intron | 20.0% |
| !! | TTAACTATATACAATAACAC+AGG | + | chr4.1:79800595-79800614 | MS.gene73308:intron | 20.0% |
| !! | TTATTAGGTGAAATAATAAG+AGG | - | chr4.1:79798982-79799001 | None:intergenic | 20.0% |
| !!! | AGTGAATATATCATAGTTTT+TGG | + | chr4.1:79797753-79797772 | MS.gene73308:intron | 20.0% |
| !!! | ATTAAGTTGTTTATCAAAAC+CGG | + | chr4.1:79798076-79798095 | MS.gene73308:intron | 20.0% |
| !!! | ATTAATGTTACTATTTTAGG+GGG | - | chr4.1:79799067-79799086 | None:intergenic | 20.0% |
| !!! | CACATTAATGTTACTATTTT+AGG | - | chr4.1:79799070-79799089 | None:intergenic | 20.0% |
| !!! | CATTAATGTTACTATTTTAG+GGG | - | chr4.1:79799068-79799087 | None:intergenic | 20.0% |
| !!! | TAATTCTAGTTGAAGATTTT+CGG | - | chr4.1:79798103-79798122 | None:intergenic | 20.0% |
| !!! | TATTTTTTGGACAAATAGTT+TGG | - | chr4.1:79800048-79800067 | None:intergenic | 20.0% |
| !!! | TTGTGATATTTTGTTATTCT+TGG | + | chr4.1:79799804-79799823 | MS.gene73308:intron | 20.0% |
| ! | AGAAGTAGTTTACATACATA+AGG | + | chr4.1:79798020-79798039 | MS.gene73308:intron | 25.0% |
| ! | ATATATTGGCATTTACTAAG+AGG | + | chr4.1:79799445-79799464 | MS.gene73308:intron | 25.0% |
| ! | ATGCATCAGTATTAATATGT+TGG | + | chr4.1:79797281-79797300 | MS.gene73308:CDS | 25.0% |
| ! | ATTAGATTAGATGTACCAAA+TGG | + | chr4.1:79799325-79799344 | MS.gene73308:intron | 25.0% |
| ! | ATTCCTATAAACAAATTGCA+TGG | - | chr4.1:79800528-79800547 | None:intergenic | 25.0% |
| ! | ATTGTACGCTTATAACATAA+CGG | - | chr4.1:79798058-79798077 | None:intergenic | 25.0% |
| ! | GATAATGATGTTGAAAATGA+AGG | + | chr4.1:79799401-79799420 | MS.gene73308:intron | 25.0% |
| ! | GTAATGAAGAGTTGTTATAT+TGG | + | chr4.1:79799290-79799309 | MS.gene73308:intron | 25.0% |
| ! | TATGTTATTCATCTTTCTTC+TGG | + | chr4.1:79797679-79797698 | MS.gene73308:CDS | 25.0% |
| ! | TCATTACAATCAACATTACA+AGG | - | chr4.1:79800292-79800311 | None:intergenic | 25.0% |
| ! | TCTTGGAAGAATGAATATTA+GGG | + | chr4.1:79797543-79797562 | MS.gene73308:CDS | 25.0% |
| ! | TGATATTACTCACATGTAAT+TGG | - | chr4.1:79799166-79799185 | None:intergenic | 25.0% |
| ! | TGCATCAGTATTAATATGTT+GGG | + | chr4.1:79797282-79797301 | MS.gene73308:CDS | 25.0% |
| ! | TTCTTGGAAGAATGAATATT+AGG | + | chr4.1:79797542-79797561 | MS.gene73308:CDS | 25.0% |
| !! | AGAAATTTTTGACCTAATGA+TGG | - | chr4.1:79797370-79797389 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCAAAACC+GGG | + | chr4.1:79798077-79798096 | MS.gene73308:intron | 25.0% |
| !!! | ATTACTGTTATTTTGTTAGC+TGG | + | chr4.1:79797514-79797533 | MS.gene73308:CDS | 25.0% |
| !!! | GGTTGATAATATTTAGTTGA+TGG | + | chr4.1:79799773-79799792 | MS.gene73308:intron | 25.0% |
| !!! | TGGCTAAATTTCACTTTTAA+GGG | - | chr4.1:79800025-79800044 | None:intergenic | 25.0% |
| !!! | TGTTTGTTTTTTTCTAGGTT+GGG | + | chr4.1:79798135-79798154 | MS.gene73308:intron | 25.0% |
| !!! | TTGTTTGTTTTTTTCTAGGT+TGG | + | chr4.1:79798134-79798153 | MS.gene73308:intron | 25.0% |
| !!! | TTGTTTTTATCTCTCTCAAA+CGG | + | chr4.1:79800442-79800461 | MS.gene73308:intron | 25.0% |
| AAATAAACAAGTGAAGCCAT+AGG | - | chr4.1:79797475-79797494 | None:intergenic | 30.0% | |
| AAGATTTCGACCTTAGTTTA+AGG | + | chr4.1:79797865-79797884 | MS.gene73308:intron | 30.0% | |
| AAGCATGGTCAAAAAGAAAT+GGG | + | chr4.1:79797225-79797244 | MS.gene73308:CDS | 30.0% | |
| ACATACATAAGGACTTGATA+AGG | + | chr4.1:79798031-79798050 | MS.gene73308:intron | 30.0% | |
| ACCTAAAGTTACTTAAGTAG+AGG | - | chr4.1:79799359-79799378 | None:intergenic | 30.0% | |
| AGATTTCGACCTTAGTTTAA+GGG | + | chr4.1:79797866-79797885 | MS.gene73308:intron | 30.0% | |
| AGCATAAGCAATACATTGTT+TGG | - | chr4.1:79798194-79798213 | None:intergenic | 30.0% | |
| ATAAGCAATACATTGTTTGG+TGG | - | chr4.1:79798191-79798210 | None:intergenic | 30.0% | |
| CGATAAAGATTGAATCTCAA+TGG | + | chr4.1:79798533-79798552 | MS.gene73308:intron | 30.0% | |
| GGATCTATAGAATATTCCAA+CGG | + | chr4.1:79799682-79799701 | MS.gene73308:intron | 30.0% | |
| TAAGCAATACATTGTTTGGT+GGG | - | chr4.1:79798190-79798209 | None:intergenic | 30.0% | |
| TATGAAGAGAAGAATTAGTG+TGG | - | chr4.1:79800831-79800850 | None:intergenic | 30.0% | |
| TATTGTTGGTATTATGTTGG+AGG | + | chr4.1:79798938-79798957 | MS.gene73308:intron | 30.0% | |
| TCCTCTACTTAAGTAACTTT+AGG | + | chr4.1:79799355-79799374 | MS.gene73308:intron | 30.0% | |
| ! | AATATGCAAGTTTTTCTGTC+AGG | - | chr4.1:79797923-79797942 | None:intergenic | 30.0% |
| ! | TAGAATATTCCAACGGTTTT+TGG | + | chr4.1:79799689-79799708 | MS.gene73308:intron | 30.0% |
| ! | TGTCCATGCAATTTGTTTAT+AGG | + | chr4.1:79800522-79800541 | MS.gene73308:intron | 30.0% |
| ! | TTTTTGGACAAATAGTTTGG+TGG | - | chr4.1:79800045-79800064 | None:intergenic | 30.0% |
| !! | AATTTCATCTGCTTTTGATG+AGG | - | chr4.1:79800978-79800997 | None:intergenic | 30.0% |
| !! | ACTAAAGTTTTGACATGAAG+TGG | + | chr4.1:79799090-79799109 | MS.gene73308:intron | 30.0% |
| !! | ATGGGAAGTGTTATTATTGT+TGG | + | chr4.1:79798924-79798943 | MS.gene73308:intron | 30.0% |
| !! | ATTCATCTTTCTTCTGGAAT+TGG | + | chr4.1:79797685-79797704 | MS.gene73308:CDS | 30.0% |
| !! | GATGAACTTTTTCCATTTTG+GGG | + | chr4.1:79797334-79797353 | MS.gene73308:CDS | 30.0% |
| !! | GGATGAACTTTTTCCATTTT+GGG | + | chr4.1:79797333-79797352 | MS.gene73308:CDS | 30.0% |
| !! | GGCTAAATTTCACTTTTAAG+GGG | - | chr4.1:79800024-79800043 | None:intergenic | 30.0% |
| !! | GTGGCTAAATTTCACTTTTA+AGG | - | chr4.1:79800026-79800045 | None:intergenic | 30.0% |
| !!! | TGGTGGATTTTTGTATCATT+GGG | + | chr4.1:79797633-79797652 | MS.gene73308:CDS | 30.0% |
| AAACAAATTGCATGGACAAG+AGG | - | chr4.1:79800520-79800539 | None:intergenic | 35.0% | |
| AAAGAAAGCAACATCCAAAG+TGG | - | chr4.1:79798348-79798367 | None:intergenic | 35.0% | |
| AAGTATCACCCTATGTTACT+GGG | + | chr4.1:79800999-79801018 | MS.gene73308:CDS | 35.0% | |
| AATATGAGTCTGCAAAGATC+TGG | - | chr4.1:79800701-79800720 | None:intergenic | 35.0% | |
| AATGAATATTAGGGCTTGGA+TGG | + | chr4.1:79797552-79797571 | MS.gene73308:CDS | 35.0% | |
| AATGGTAGGAAAACATGCAT+AGG | - | chr4.1:79800568-79800587 | None:intergenic | 35.0% | |
| AATGTATTGCTTATGCTAGC+AGG | + | chr4.1:79798197-79798216 | MS.gene73308:CDS | 35.0% | |
| ACACAATGATGTATCGTAAG+TGG | - | chr4.1:79798577-79798596 | None:intergenic | 35.0% | |
| ATGGACAAGAGGTAACAAAT+AGG | - | chr4.1:79800509-79800528 | None:intergenic | 35.0% | |
| ATTGGCATTTACTAAGAGGT+GGG | + | chr4.1:79799449-79799468 | MS.gene73308:intron | 35.0% | |
| ATTGTGACTAAAGTCTTGAC+AGG | + | chr4.1:79799040-79799059 | MS.gene73308:intron | 35.0% | |
| CAAGCATGGTCAAAAAGAAA+TGG | + | chr4.1:79797224-79797243 | MS.gene73308:CDS | 35.0% | |
| GAAGAATGAATATTAGGGCT+TGG | + | chr4.1:79797548-79797567 | MS.gene73308:CDS | 35.0% | |
| GAAGTCAACTCTTCTACAAA+AGG | + | chr4.1:79799572-79799591 | MS.gene73308:CDS | 35.0% | |
| TAAACAAAGGAGACAACTCA+TGG | + | chr4.1:79797140-79797159 | MS.gene73308:CDS | 35.0% | |
| TAAGAGAAAATGAGCCAAAG+AGG | - | chr4.1:79797586-79797605 | None:intergenic | 35.0% | |
| TATTGGCATTTACTAAGAGG+TGG | + | chr4.1:79799448-79799467 | MS.gene73308:intron | 35.0% | |
| TCAGTTCTTGAAGCAATTAG+TGG | + | chr4.1:79800769-79800788 | MS.gene73308:CDS | 35.0% | |
| TGTTGAGATACGAGAACTTA+TGG | + | chr4.1:79797943-79797962 | MS.gene73308:intron | 35.0% | |
| TGTTGTTGCAAGAACAATCA+TGG | + | chr4.1:79797810-79797829 | MS.gene73308:intron | 35.0% | |
| TTAAAGAAGTGAGTGCTTTC+AGG | - | chr4.1:79797412-79797431 | None:intergenic | 35.0% | |
| TTAGATGTACCAAATGGACA+AGG | + | chr4.1:79799331-79799350 | MS.gene73308:intron | 35.0% | |
| TTCAAAGAACCAAAAACCGT+TGG | - | chr4.1:79799701-79799720 | None:intergenic | 35.0% | |
| TTGTGACTAAAGTCTTGACA+GGG | + | chr4.1:79799041-79799060 | MS.gene73308:intron | 35.0% | |
| ! | AGCACTCACTTCTTTAAGAA+TGG | + | chr4.1:79797415-79797434 | MS.gene73308:CDS | 35.0% |
| ! | ATAGTGATGGGAATACTATC+TGG | + | chr4.1:79799513-79799532 | MS.gene73308:CDS | 35.0% |
| ! | CTCATTTTCTCTTACACTGT+TGG | + | chr4.1:79797592-79797611 | MS.gene73308:CDS | 35.0% |
| ! | GATATGGCTCTGTTATTACT+TGG | - | chr4.1:79800145-79800164 | None:intergenic | 35.0% |
| ! | GGTTCTTTTATGTTACCGTA+TGG | + | chr4.1:79797303-79797322 | MS.gene73308:CDS | 35.0% |
| ! | TAGTGATGGGAATACTATCT+GGG | + | chr4.1:79799514-79799533 | MS.gene73308:CDS | 35.0% |
| !! | ACTTTGGATGTTGCTTTCTT+TGG | + | chr4.1:79798347-79798366 | MS.gene73308:CDS | 35.0% |
| !! | GGGATGAACTTTTTCCATTT+TGG | + | chr4.1:79797332-79797351 | MS.gene73308:CDS | 35.0% |
| !! | GGTGGATTTTTGTATCATTG+GGG | + | chr4.1:79797634-79797653 | MS.gene73308:CDS | 35.0% |
| !! | TGTTGGTGCTTTTAGCATAT+GGG | + | chr4.1:79797609-79797628 | MS.gene73308:CDS | 35.0% |
| !!! | AACACAACCACTTTTTCCTA+TGG | + | chr4.1:79797456-79797475 | MS.gene73308:CDS | 35.0% |
| !!! | CTTTTTCCATTTTGGGGTAA+AGG | + | chr4.1:79797340-79797359 | MS.gene73308:CDS | 35.0% |
| !!! | GTGGTGGATTTTTGTATCAT+TGG | + | chr4.1:79797632-79797651 | MS.gene73308:CDS | 35.0% |
| AAGTATGACCCAACTAAGCA+TGG | + | chr4.1:79800950-79800969 | MS.gene73308:CDS | 40.0% | |
| AGTATCACCCTATGTTACTG+GGG | + | chr4.1:79801000-79801019 | MS.gene73308:CDS | 40.0% | |
| AGTGAAGCCATAGGAAAAAG+TGG | - | chr4.1:79797466-79797485 | None:intergenic | 40.0% | |
| ATGAGGATCCATGCTTAGTT+GGG | - | chr4.1:79800961-79800980 | None:intergenic | 40.0% | |
| ATGTGTGTGAAACACTCCAA+GGG | - | chr4.1:79800630-79800649 | None:intergenic | 40.0% | |
| CATGCTTTGTAGACCAACTA+GGG | - | chr4.1:79797182-79797201 | None:intergenic | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | chr4.1:79798710-79798729 | None:intergenic | 40.0% | |
| GAAGAGAAGAATTAGTGTGG+TGG | - | chr4.1:79800828-79800847 | None:intergenic | 40.0% | |
| GACAAGAGGTAACAAATAGG+AGG | - | chr4.1:79800506-79800525 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr4.1:79798713-79798732 | None:intergenic | 40.0% | |
| GCAGTCTCTCTCCAAAATAT+TGG | + | chr4.1:79799752-79799771 | MS.gene73308:intron | 40.0% | |
| GGAAAACATGCATAGGATCA+AGG | - | chr4.1:79800561-79800580 | None:intergenic | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | + | chr4.1:79798721-79798740 | MS.gene73308:intron | 40.0% | |
| GGCTATGAATTCAGCTTTCA+TGG | + | chr4.1:79797246-79797265 | MS.gene73308:CDS | 40.0% | |
| TACAACTGTTCATACCCTTG+AGG | + | chr4.1:79800849-79800868 | MS.gene73308:CDS | 40.0% | |
| TATGTTACCGTATGGCCTTT+GGG | + | chr4.1:79797311-79797330 | MS.gene73308:CDS | 40.0% | |
| TCACCACAATGGCTAAACAA+AGG | + | chr4.1:79797127-79797146 | MS.gene73308:CDS | 40.0% | |
| TCTTTGCAGACTCATATTGC+CGG | + | chr4.1:79800703-79800722 | MS.gene73308:CDS | 40.0% | |
| TGGAAAAAGTTCATCCCCAA+AGG | - | chr4.1:79797329-79797348 | None:intergenic | 40.0% | |
| TGGATTCACTGCAGCTTATT+GGG | + | chr4.1:79797708-79797727 | MS.gene73308:CDS | 40.0% | |
| TGTAATCCTCTATGCAAGCA+TGG | + | chr4.1:79797210-79797229 | MS.gene73308:CDS | 40.0% | |
| TGTTGGTATTATGTTGGAGG+TGG | + | chr4.1:79798941-79798960 | MS.gene73308:intron | 40.0% | |
| TTATGTTACCGTATGGCCTT+TGG | + | chr4.1:79797310-79797329 | MS.gene73308:CDS | 40.0% | |
| TTGGCATTTACTAAGAGGTG+GGG | + | chr4.1:79799450-79799469 | MS.gene73308:intron | 40.0% | |
| TTGTTAGCTGGATCTGTTCT+TGG | + | chr4.1:79797526-79797545 | MS.gene73308:CDS | 40.0% | |
| TTTATAGACAAACCTGCTCC+AGG | - | chr4.1:79798431-79798450 | None:intergenic | 40.0% | |
| TTTGGTAAGCCTTCAGTGAT+TGG | + | chr4.1:79798365-79798384 | MS.gene73308:CDS | 40.0% | |
| ! | GAAGTATCACCCTATGTTAC+TGG | + | chr4.1:79800998-79801017 | MS.gene73308:CDS | 40.0% |
| ! | GAGTCAATGTTTGCTGCATA+TGG | - | chr4.1:79798269-79798288 | None:intergenic | 40.0% |
| ! | GTAGAAGAGTTGACTTCTTG+TGG | - | chr4.1:79799569-79799588 | None:intergenic | 40.0% |
| ! | TCTCCTTTGTTTAGCCATTG+TGG | - | chr4.1:79797133-79797152 | None:intergenic | 40.0% |
| ! | TTTAGCCATTGTGGTGATGA+AGG | - | chr4.1:79797124-79797143 | None:intergenic | 40.0% |
| ! | TTTTGACCATGCTTGCATAG+AGG | - | chr4.1:79797219-79797238 | None:intergenic | 40.0% |
| !! | CATCTTTCTTCTGGAATTGG+TGG | + | chr4.1:79797688-79797707 | MS.gene73308:CDS | 40.0% |
| !! | CTGTTGGTGCTTTTAGCATA+TGG | + | chr4.1:79797608-79797627 | MS.gene73308:CDS | 40.0% |
| !! | GTTGGTGCTTTTAGCATATG+GGG | + | chr4.1:79797610-79797629 | MS.gene73308:CDS | 40.0% |
| !! | TACTATCTGGGAGTATTCCA+TGG | + | chr4.1:79799526-79799545 | MS.gene73308:CDS | 40.0% |
| !! | TATTCCATGGTGGACTATGA+TGG | + | chr4.1:79799539-79799558 | MS.gene73308:CDS | 40.0% |
| !!! | TTTTTTTCTAGGTTGGGCCA+AGG | + | chr4.1:79798141-79798160 | MS.gene73308:intron | 40.0% |
| AATTCAAGGGGAGCCTTCTA+TGG | + | chr4.1:79800731-79800750 | MS.gene73308:CDS | 45.0% | |
| ACCTTCCTTCATCACCACAA+TGG | + | chr4.1:79797116-79797135 | MS.gene73308:CDS | 45.0% | |
| AGGTGCAGGATTGTTATGGA+TGG | + | chr4.1:79798217-79798236 | MS.gene73308:CDS | 45.0% | |
| AGTGTTTCACACACATGCTG+TGG | + | chr4.1:79800634-79800653 | MS.gene73308:CDS | 45.0% | |
| ATAGAAGGCTCCCCTTGAAT+TGG | - | chr4.1:79800732-79800751 | None:intergenic | 45.0% | |
| ATCTCTCTCAAACGGTGACA+CGG | + | chr4.1:79800450-79800469 | MS.gene73308:intron | 45.0% | |
| ATGACAGCATCAACCCTAGT+TGG | + | chr4.1:79797166-79797185 | MS.gene73308:CDS | 45.0% | |
| ATGTTACCGTATGGCCTTTG+GGG | + | chr4.1:79797312-79797331 | MS.gene73308:CDS | 45.0% | |
| ATTCAAGGGGAGCCTTCTAT+GGG | + | chr4.1:79800732-79800751 | MS.gene73308:CDS | 45.0% | |
| ATTGCCGGTGACCAATTCAA+GGG | + | chr4.1:79800718-79800737 | MS.gene73308:CDS | 45.0% | |
| CAGGATTGTTATGGATGGGT+TGG | + | chr4.1:79798222-79798241 | MS.gene73308:CDS | 45.0% | |
| CATGTGTGTGAAACACTCCA+AGG | - | chr4.1:79800631-79800650 | None:intergenic | 45.0% | |
| CATTTACTAAGAGGTGGGGT+TGG | + | chr4.1:79799454-79799473 | MS.gene73308:intron | 45.0% | |
| CCAGACAGACCCTTAAACTA+AGG | - | chr4.1:79797878-79797897 | None:intergenic | 45.0% | |
| CCTTAGTTTAAGGGTCTGTC+TGG | + | chr4.1:79797875-79797894 | MS.gene73308:intron | 45.0% | |
| CGAGGAAGCTTATGCACTTT+GGG | + | chr4.1:79800916-79800935 | MS.gene73308:CDS | 45.0% | |
| CTCTTGGTATGCTGTTGGAA+GGG | - | chr4.1:79797095-79797114 | None:intergenic | 45.0% | |
| GAGGAAGCTTATGCACTTTG+GGG | + | chr4.1:79800917-79800936 | MS.gene73308:CDS | 45.0% | |
| GATGAGGATCCATGCTTAGT+TGG | - | chr4.1:79800962-79800981 | None:intergenic | 45.0% | |
| GCATAGAGGATTACAAGACC+TGG | - | chr4.1:79797205-79797224 | None:intergenic | 45.0% | |
| GCATGCTTTGTAGACCAACT+AGG | - | chr4.1:79797183-79797202 | None:intergenic | 45.0% | |
| GCCAAGGTTGAAGAGTGATA+GGG | + | chr4.1:79798157-79798176 | MS.gene73308:CDS | 45.0% | |
| GGTGCAGGATTGTTATGGAT+GGG | + | chr4.1:79798218-79798237 | MS.gene73308:CDS | 45.0% | |
| GTAGAGGATCCTTGTCCATT+TGG | - | chr4.1:79799343-79799362 | None:intergenic | 45.0% | |
| GTGGATTCACTGCAGCTTAT+TGG | + | chr4.1:79797707-79797726 | MS.gene73308:CDS | 45.0% | |
| TAGCAGGTGCAGGATTGTTA+TGG | + | chr4.1:79798213-79798232 | MS.gene73308:CDS | 45.0% | |
| TATTGCCGGTGACCAATTCA+AGG | + | chr4.1:79800717-79800736 | MS.gene73308:CDS | 45.0% | |
| TCAGTGATTGGAGCTGTTCA+GGG | + | chr4.1:79798377-79798396 | MS.gene73308:CDS | 45.0% | |
| TCATGGGCAGCTATAGTGAT+GGG | + | chr4.1:79799501-79799520 | MS.gene73308:CDS | 45.0% | |
| TCCCTATCACTCTTCAACCT+TGG | - | chr4.1:79798161-79798180 | None:intergenic | 45.0% | |
| TGAACAGCTCCAATCACTGA+AGG | - | chr4.1:79798377-79798396 | None:intergenic | 45.0% | |
| TTCAGTGATTGGAGCTGTTC+AGG | + | chr4.1:79798376-79798395 | MS.gene73308:CDS | 45.0% | |
| TTTGGAGAGAGACTGCAACT+AGG | - | chr4.1:79799748-79799767 | None:intergenic | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr4.1:79798693-79798712 | None:intergenic | 45.0% |
| ! | CTAGTTGAAGATTTTCGGCC+CGG | - | chr4.1:79798098-79798117 | None:intergenic | 45.0% |
| ! | CTTGCTGTGTTGTGTGACTT+GGG | - | chr4.1:79799858-79799877 | None:intergenic | 45.0% |
| ! | GAAGAGTTGACTTCTTGTGG+AGG | - | chr4.1:79799566-79799585 | None:intergenic | 45.0% |
| ! | GGATGGCTTTTGTACCTCTT+TGG | + | chr4.1:79797569-79797588 | MS.gene73308:CDS | 45.0% |
| ! | GGTAAAGGTGCACCATCATT+AGG | + | chr4.1:79797355-79797374 | MS.gene73308:CDS | 45.0% |
| ! | TGGCAGCACTTTTCATCACT+GGG | + | chr4.1:79800789-79800808 | MS.gene73308:CDS | 45.0% |
| !! | ACTTGCTGTGTTGTGTGACT+TGG | - | chr4.1:79799859-79799878 | None:intergenic | 45.0% |
| !! | GGTGTCATTGATTTCTCTGG+TGG | + | chr4.1:79797655-79797674 | MS.gene73308:CDS | 45.0% |
| !! | TATCTGGGAGTATTCCATGG+TGG | + | chr4.1:79799529-79799548 | MS.gene73308:CDS | 45.0% |
| !! | TGGGGTGTCATTGATTTCTC+TGG | + | chr4.1:79797652-79797671 | MS.gene73308:CDS | 45.0% |
| !! | TGTTATGGATGGGTTGGTCA+GGG | + | chr4.1:79798228-79798247 | MS.gene73308:CDS | 45.0% |
| !! | TTGTTATGGATGGGTTGGTC+AGG | + | chr4.1:79798227-79798246 | MS.gene73308:CDS | 45.0% |
| !!! | TATTGATTATAATAAATAAA+TGG | + | chr4.1:79798485-79798504 | MS.gene73308:intron | 5.0% |
| !!! | TATTTATTTTTTTTCAAAAT+GGG | + | chr4.1:79798906-79798925 | MS.gene73308:intron | 5.0% |
| !!! | TTATTTATTTTTTTTCAAAA+TGG | + | chr4.1:79798905-79798924 | MS.gene73308:intron | 5.0% |
| ACACAGGTAGATGACACCCT+TGG | + | chr4.1:79800611-79800630 | MS.gene73308:intron | 50.0% | |
| ACCTCTTGCCCCAGTAACAT+AGG | - | chr4.1:79801011-79801030 | None:intergenic | 50.0% | |
| ACTGGCGATGATGCTGTACA+CGG | + | chr4.1:79800893-79800912 | MS.gene73308:CDS | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | chr4.1:79798700-79798719 | MS.gene73308:intron | 50.0% | |
| AGGACCATCATAGTCCACCA+TGG | - | chr4.1:79799546-79799565 | None:intergenic | 50.0% | |
| AGGTGCTCTTGGTATGCTGT+TGG | - | chr4.1:79797100-79797119 | None:intergenic | 50.0% | |
| CATCCAAAGTGGTCCACACT+AGG | - | chr4.1:79798337-79798356 | None:intergenic | 50.0% | |
| CCTCTTGCCCCAGTAACATA+GGG | - | chr4.1:79801010-79801029 | None:intergenic | 50.0% | |
| GCGAGGAAGCTTATGCACTT+TGG | + | chr4.1:79800915-79800934 | MS.gene73308:CDS | 50.0% | |
| GCTCTTGGTATGCTGTTGGA+AGG | - | chr4.1:79797096-79797115 | None:intergenic | 50.0% | |
| GCTGTTCAGGGTATGATGAC+AGG | + | chr4.1:79798389-79798408 | MS.gene73308:CDS | 50.0% | |
| GGCCAAGGTTGAAGAGTGAT+AGG | + | chr4.1:79798156-79798175 | MS.gene73308:CDS | 50.0% | |
| GGTGCACCTTTACCCCAAAA+TGG | - | chr4.1:79797349-79797368 | None:intergenic | 50.0% | |
| GTCATGGGCAGCTATAGTGA+TGG | + | chr4.1:79799500-79799519 | MS.gene73308:CDS | 50.0% | |
| GTTCATCCCCAAAGGCCATA+CGG | - | chr4.1:79797321-79797340 | None:intergenic | 50.0% | |
| GTTCTGCTAAGAGACCTGTG+AGG | - | chr4.1:79800679-79800698 | None:intergenic | 50.0% | |
| TCTCCTAGTGTGGACCACTT+TGG | + | chr4.1:79798331-79798350 | MS.gene73308:CDS | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr4.1:79798705-79798724 | None:intergenic | 50.0% | |
| TGGTCGTTCGACATCCTCAA+GGG | - | chr4.1:79800866-79800885 | None:intergenic | 50.0% | |
| TTGCCGGTGACCAATTCAAG+GGG | + | chr4.1:79800719-79800738 | MS.gene73308:CDS | 50.0% | |
| TTGCTTATGCTAGCAGGTGC+AGG | + | chr4.1:79798203-79798222 | MS.gene73308:CDS | 50.0% | |
| TTTCACACACATGCTGTGGC+CGG | + | chr4.1:79800638-79800657 | MS.gene73308:CDS | 50.0% | |
| ! | CAGCACTTTTCATCACTGGG+TGG | + | chr4.1:79800792-79800811 | MS.gene73308:CDS | 50.0% |
| ! | CTGCAACTAGTCTCCTAGTG+TGG | + | chr4.1:79798321-79798340 | MS.gene73308:CDS | 50.0% |
| ! | GCCATTGTGGTGATGAAGGA+AGG | - | chr4.1:79797120-79797139 | None:intergenic | 50.0% |
| ! | GCTTTTAGCATATGGGGTGG+TGG | + | chr4.1:79797616-79797635 | MS.gene73308:CDS | 50.0% |
| ! | GGACTTGTTTGCATCACTCC+TGG | + | chr4.1:79798410-79798429 | MS.gene73308:CDS | 50.0% |
| ! | GGTGCTTTTAGCATATGGGG+TGG | + | chr4.1:79797613-79797632 | MS.gene73308:CDS | 50.0% |
| ! | GTGGCAGCACTTTTCATCAC+TGG | + | chr4.1:79800788-79800807 | MS.gene73308:CDS | 50.0% |
| ! | GTTGGTCTACAAAGCATGCC+AGG | + | chr4.1:79797184-79797203 | MS.gene73308:CDS | 50.0% |
| !! | ATGGGTTGGTCAGGGTTCAA+TGG | + | chr4.1:79798236-79798255 | MS.gene73308:CDS | 50.0% |
| !! | GCTTATGCACTTTGGGGTGA+TGG | + | chr4.1:79800923-79800942 | MS.gene73308:CDS | 50.0% |
| !! | GTGATGAAGGAAGGTGCTCT+TGG | - | chr4.1:79797111-79797130 | None:intergenic | 50.0% |
| CCCTATGTTACTGGGGCAAG+AGG | + | chr4.1:79801007-79801026 | MS.gene73308:CDS | 55.0% | |
| CTGCTAAGAGACCTGTGAGG+AGG | - | chr4.1:79800676-79800695 | None:intergenic | 55.0% | |
| CTGGTCGTTCGACATCCTCA+AGG | - | chr4.1:79800867-79800886 | None:intergenic | 55.0% | |
| CTGTGAGGAGGCCTCCTAAA+AGG | - | chr4.1:79800664-79800683 | None:intergenic | 55.0% | |
| GCTCCCCTTGAATTGGTCAC+CGG | - | chr4.1:79800725-79800744 | None:intergenic | 55.0% | |
| GTTTGCATCACTCCTGGAGC+AGG | + | chr4.1:79798416-79798435 | MS.gene73308:CDS | 55.0% | |
| ! | GGTTGGTCAGGGTTCAATGG+TGG | + | chr4.1:79798239-79798258 | MS.gene73308:CDS | 55.0% |
| !! | CTTTTAGGAGGCCTCCTCAC+AGG | + | chr4.1:79800662-79800681 | MS.gene73308:CDS | 55.0% |
| AGGGGAGCCTTCTATGGGCA+TGG | + | chr4.1:79800737-79800756 | MS.gene73308:CDS | 60.0% | |
| CATCATCGCCAGTCTCGAGC+TGG | - | chr4.1:79800886-79800905 | None:intergenic | 60.0% | |
| CGATGATGCTGTACACGGCG+AGG | + | chr4.1:79800898-79800917 | MS.gene73308:CDS | 60.0% | |
| GAGGAGGCCTCCTAAAAGGC+CGG | - | chr4.1:79800660-79800679 | None:intergenic | 60.0% | |
| GGAGCCTTCTATGGGCATGG+CGG | + | chr4.1:79800740-79800759 | MS.gene73308:CDS | 60.0% | |
| GGCAGGGCTTGTGCAGTCAT+GGG | + | chr4.1:79799485-79799504 | MS.gene73308:intron | 60.0% | |
| TCGAACGACCAGCTCGAGAC+TGG | + | chr4.1:79800875-79800894 | MS.gene73308:CDS | 60.0% | |
| TGGCAGGGCTTGTGCAGTCA+TGG | + | chr4.1:79799484-79799503 | MS.gene73308:intron | 60.0% | |
| ! | CATGCTGTGGCCGGCCTTTT+AGG | + | chr4.1:79800647-79800666 | MS.gene73308:CDS | 60.0% |
| !! | GAGGTGGGGTTGGTTGCAAC+TGG | + | chr4.1:79799464-79799483 | MS.gene73308:intron | 60.0% |
| !! | GGGGTTGGTTGCAACTGGCA+GGG | + | chr4.1:79799469-79799488 | MS.gene73308:intron | 60.0% |
| !! | TGGGGTTGGTTGCAACTGGC+AGG | + | chr4.1:79799468-79799487 | MS.gene73308:intron | 60.0% |
| GCCTTCTATGGGCATGGCGG+CGG | + | chr4.1:79800743-79800762 | MS.gene73308:CDS | 65.0% | |
| ! | GCTGTGGCCGGCCTTTTAGG+AGG | + | chr4.1:79800650-79800669 | MS.gene73308:CDS | 65.0% |
| GCCGCCGCCATGCCCATAGA+AGG | - | chr4.1:79800747-79800766 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 79797088 | 79801048 | 79797088 | ID=MS.gene73308 |
| chr4.1 | mRNA | 79797088 | 79801048 | 79797088 | ID=MS.gene73308.t1;Parent=MS.gene73308 |
| chr4.1 | exon | 79797088 | 79797729 | 79797088 | ID=MS.gene73308.t1.exon1;Parent=MS.gene73308.t1 |
| chr4.1 | CDS | 79797088 | 79797729 | 79797088 | ID=cds.MS.gene73308.t1;Parent=MS.gene73308.t1 |
| chr4.1 | exon | 79798152 | 79798437 | 79798152 | ID=MS.gene73308.t1.exon2;Parent=MS.gene73308.t1 |
| chr4.1 | CDS | 79798152 | 79798437 | 79798152 | ID=cds.MS.gene73308.t1;Parent=MS.gene73308.t1 |
| chr4.1 | exon | 79799490 | 79799593 | 79799490 | ID=MS.gene73308.t1.exon3;Parent=MS.gene73308.t1 |
| chr4.1 | CDS | 79799490 | 79799593 | 79799490 | ID=cds.MS.gene73308.t1;Parent=MS.gene73308.t1 |
| chr4.1 | exon | 79800617 | 79801048 | 79800617 | ID=MS.gene73308.t1.exon4;Parent=MS.gene73308.t1 |
| chr4.1 | CDS | 79800617 | 79801048 | 79800617 | ID=cds.MS.gene73308.t1;Parent=MS.gene73308.t1 |
| Gene Sequence |
| Protein sequence |
