Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73502.t1 | XP_003617622.1 | 97.4 | 311 | 7 | 1 | 1 | 310 | 1 | 311 | 2.60E-150 | 541.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73502.t1 | Q9FFK1 | 64.9 | 316 | 102 | 4 | 1 | 310 | 1 | 313 | 1.7e-97 | 357.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73502.t1 | G7K8M8 | 97.4 | 311 | 7 | 1 | 1 | 310 | 1 | 311 | 1.9e-150 | 541.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072972 | MS.gene73502 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73502.t1 | MTR_5g093600 | 95.666 | 323 | 9 | 2 | 1 | 322 | 1 | 319 | 0.0 | 631 |
| MS.gene73502.t1 | MTR_5g093600 | 95.219 | 251 | 8 | 1 | 72 | 322 | 7 | 253 | 7.76e-178 | 493 |
| MS.gene73502.t1 | MTR_3g108160 | 50.000 | 320 | 134 | 4 | 3 | 310 | 8 | 313 | 5.25e-80 | 247 |
| MS.gene73502.t1 | MTR_3g108160 | 47.945 | 292 | 126 | 4 | 3 | 282 | 8 | 285 | 1.02e-63 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73502.t1 | AT5G05760 | 59.412 | 340 | 107 | 6 | 1 | 325 | 1 | 324 | 5.37e-128 | 370 |
| MS.gene73502.t1 | AT3G24350 | 44.348 | 345 | 147 | 8 | 3 | 322 | 8 | 332 | 4.28e-78 | 243 |
| MS.gene73502.t1 | AT3G24350 | 43.516 | 347 | 141 | 8 | 3 | 310 | 8 | 338 | 8.17e-74 | 232 |
Find 79 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTTCTTCGCGACTTATT+TGG | 0.166961 | 5.2:-78697569 | MS.gene73502:CDS |
| GACCTTGAATTCGGCTGTTT+TGG | 0.235052 | 5.2:-78702697 | MS.gene73502:CDS |
| GCCTCTTCACTTAGTTGCTT+TGG | 0.264019 | 5.2:+78697513 | None:intergenic |
| AGCTCTTGAATTTCCATTAT+CGG | 0.283903 | 5.2:+78702747 | None:intergenic |
| GCCACCTATTTGATGATATT+CGG | 0.303455 | 5.2:+78697673 | None:intergenic |
| CTGATGCTGTAAAGGGTTCT+TGG | 0.317200 | 5.2:+78701155 | None:intergenic |
| TCAACCGAATATCATCAAAT+AGG | 0.355079 | 5.2:-78697677 | MS.gene73502:intron |
| AAATATTCAGAAGATTGATT+TGG | 0.359781 | 5.2:-78702667 | MS.gene73502:CDS |
| GAGGTAGACGGTTGTTGATT+CGG | 0.366301 | 5.2:+78703072 | None:intergenic |
| GTTGAATTCGGATCTTGAAT+AGG | 0.382249 | 5.2:+78703041 | None:intergenic |
| CCAGAGACATCTCCATTTGC+TGG | 0.382646 | 5.2:+78698448 | None:intergenic |
| CCAGCTGGGATTCCATTTGA+TGG | 0.389350 | 5.2:+78700161 | None:intergenic |
| TTGCTTACACTTTGCGAGCC+TGG | 0.393574 | 5.2:+78702966 | None:intergenic |
| ACCTTAGCTGATTGCCAGCT+GGG | 0.396395 | 5.2:+78700147 | None:intergenic |
| TAGTGGAATCTTCACACATT+TGG | 0.400662 | 5.2:-78698340 | MS.gene73502:CDS |
| AAAGCATCACAAATCGGATT+AGG | 0.401879 | 5.2:-78703015 | MS.gene73502:CDS |
| TGATAGCTAGCTCTCCTTGA+TGG | 0.405749 | 5.2:+78698304 | None:intergenic |
| ATCAAGGAGAGCTAGCTATC+AGG | 0.408272 | 5.2:-78698302 | MS.gene73502:intron |
| GCTTTGGCTGATGCTGTAAA+GGG | 0.413358 | 5.2:+78701148 | None:intergenic |
| GGCTTTGGCTGATGCTGTAA+AGG | 0.414806 | 5.2:+78701147 | None:intergenic |
| ATCCAAAACAGCCGAATTCA+AGG | 0.417994 | 5.2:+78702695 | None:intergenic |
| TGATATAACGACCTTGAATT+CGG | 0.419068 | 5.2:-78702706 | MS.gene73502:CDS |
| AAGAAAATCGGCGGCGGAGG+CGG | 0.420834 | 5.2:-78703108 | MS.gene73502:CDS |
| ACATCAAGGCTCACGAGAAT+AGG | 0.424620 | 5.2:-78701191 | MS.gene73502:CDS |
| AACATCTTGAAGATGCTTTG+TGG | 0.426481 | 5.2:+78702566 | None:intergenic |
| CACGGTGGTGGTTCAGTAGT+TGG | 0.434345 | 5.2:+78701126 | None:intergenic |
| GAGAGTTTGCAACAAACATC+AGG | 0.446094 | 5.2:-78701075 | MS.gene73502:CDS |
| CTCAAGAAAATCGGCGGCGG+AGG | 0.446694 | 5.2:-78703111 | MS.gene73502:CDS |
| GACATCTCCATTTGCTGGGA+TGG | 0.447518 | 5.2:+78698453 | None:intergenic |
| GATGTTTAATGATCCGATAA+TGG | 0.449546 | 5.2:-78702760 | MS.gene73502:CDS |
| GGTGGTTCAGTAGTTGGCTT+TGG | 0.458863 | 5.2:+78701132 | None:intergenic |
| AACCTTAGCTGATTGCCAGC+TGG | 0.459493 | 5.2:+78700146 | None:intergenic |
| AAACACTCCATCCCAGCAAA+TGG | 0.466839 | 5.2:-78698460 | MS.gene73502:CDS |
| TTTGTGATGACTTGAAGAAC+AGG | 0.477282 | 5.2:-78702599 | MS.gene73502:CDS |
| TGTGAAGATTCCACTAAGTT+CGG | 0.478325 | 5.2:+78698347 | None:intergenic |
| AACCGAAAAGCATCACAAAT+CGG | 0.480320 | 5.2:-78703021 | MS.gene73502:CDS |
| ACGGAGACTCTCAAGAAAAT+CGG | 0.486910 | 5.2:-78703120 | MS.gene73502:CDS |
| CTTCACACATTTGGCTACAA+TGG | 0.501946 | 5.2:-78698331 | MS.gene73502:CDS |
| TCTACTATTACCGAACTTAG+TGG | 0.515127 | 5.2:-78698357 | MS.gene73502:CDS |
| GGAGATGTCTCTGGTACAGC+AGG | 0.516436 | 5.2:-78698439 | MS.gene73502:CDS |
| GATAGCTAGCTCTCCTTGAT+GGG | 0.518110 | 5.2:+78698305 | None:intergenic |
| CCAGCAAATGGAGATGTCTC+TGG | 0.519496 | 5.2:-78698448 | MS.gene73502:CDS |
| GACTTGAAGAACAGGCTCAT+GGG | 0.525233 | 5.2:-78702591 | MS.gene73502:CDS |
| GAGTCATTGGCAAATGTTGA+AGG | 0.525836 | 5.2:-78697726 | MS.gene73502:CDS |
| TGACAACATGGATGAGTCAT+TGG | 0.527110 | 5.2:-78697739 | MS.gene73502:CDS |
| GATTCGTCTTTATCCTGCTG+TGG | 0.532895 | 5.2:-78697547 | MS.gene73502:CDS |
| GCTACAATGGTTGCCCATCA+AGG | 0.533000 | 5.2:-78698318 | MS.gene73502:CDS |
| GAGCTCACAGTTCTTTATTG+AGG | 0.540197 | 5.2:-78697704 | MS.gene73502:CDS |
| CAAGTCATCACAAACAGCAT+TGG | 0.543561 | 5.2:+78702608 | None:intergenic |
| AAACCTCTCAGAAAATCGCC+AGG | 0.543641 | 5.2:-78702984 | MS.gene73502:CDS |
| TCCCAGCTGGCAATCAGCTA+AGG | 0.546014 | 5.2:-78700148 | MS.gene73502:intron |
| TGACTTGAAGAACAGGCTCA+TGG | 0.554997 | 5.2:-78702592 | MS.gene73502:CDS |
| CCATCAAATGGAATCCCAGC+TGG | 0.557677 | 5.2:-78700161 | MS.gene73502:CDS |
| CGAAGACTATGCTCAAAGTC+GGG | 0.559268 | 5.2:-78698403 | MS.gene73502:CDS |
| TGAGAGTCTCCGTCAGTGAT+CGG | 0.564444 | 5.2:+78703130 | None:intergenic |
| TTGTTGATTCGGCGGTGCAG+TGG | 0.565773 | 5.2:+78703083 | None:intergenic |
| GCCAAAGCAACTAAGTGAAG+AGG | 0.569615 | 5.2:-78697514 | MS.gene73502:CDS |
| GTTGAATTAGACCACGGTGG+TGG | 0.572623 | 5.2:+78701114 | None:intergenic |
| CAGAGACATCTCCATTTGCT+GGG | 0.576744 | 5.2:+78698449 | None:intergenic |
| TGAGCATAGTCTTCGTGTCG+AGG | 0.583773 | 5.2:+78698411 | None:intergenic |
| ACGAAGACTATGCTCAAAGT+CGG | 0.589584 | 5.2:-78698404 | MS.gene73502:CDS |
| TTTGGCTGATGAGAATTACT+CGG | 0.602135 | 5.2:-78702649 | MS.gene73502:CDS |
| TAGGAACTTTGAGAGGTAGA+CGG | 0.622767 | 5.2:+78703060 | None:intergenic |
| GGAACTCCGACGTGCGATCG+CGG | 0.623758 | 5.2:+78703151 | None:intergenic |
| TCATGTACCCTAGAACATCA+AGG | 0.624353 | 5.2:-78701205 | MS.gene73502:intron |
| TCTTGAATAGGAACTTTGAG+AGG | 0.637072 | 5.2:+78703053 | None:intergenic |
| ATACAGACGGAGATTAGCTG+TGG | 0.639074 | 5.2:-78698484 | MS.gene73502:intron |
| ACTCTCAAGAAAATCGGCGG+CGG | 0.646295 | 5.2:-78703114 | MS.gene73502:CDS |
| GGCAAGTGCTCTGCACAATG+TGG | 0.647784 | 5.2:-78698382 | MS.gene73502:CDS |
| AACTTACCGCGATCGCACGT+CGG | 0.649088 | 5.2:-78703157 | MS.gene73502:CDS |
| GCATTTGTTGAATTAGACCA+CGG | 0.655529 | 5.2:+78701108 | None:intergenic |
| GTCGGAGTTCCGATCACTGA+CGG | 0.667298 | 5.2:-78703139 | MS.gene73502:CDS |
| GTAGACGGTTGTTGATTCGG+CGG | 0.669491 | 5.2:+78703075 | None:intergenic |
| AGAGTTTGCAACAAACATCA+GGG | 0.673228 | 5.2:-78701074 | MS.gene73502:intron |
| GGCTGATGAGAATTACTCGG+AGG | 0.694225 | 5.2:-78702646 | MS.gene73502:CDS |
| GAGACTCTCAAGAAAATCGG+CGG | 0.704359 | 5.2:-78703117 | MS.gene73502:CDS |
| GGGCAGGATTGATGACAACA+TGG | 0.717600 | 5.2:-78697751 | MS.gene73502:intron |
| CAACTACTGAACCACCACCG+TGG | 0.785732 | 5.2:-78701125 | MS.gene73502:CDS |
| TTTGTTGAATTAGACCACGG+TGG | 0.786289 | 5.2:+78701111 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTAATATCATGTTAA+AGG | - | chr5.2:78699621-78699640 | MS.gene73502:intron | 10.0% |
| !! | ACAAAAAACAATAATCTTTA+AGG | + | chr5.2:78700481-78700500 | None:intergenic | 15.0% |
| !! | ATAGATTTAATTCATATACA+CGG | + | chr5.2:78699008-78699027 | None:intergenic | 15.0% |
| !! | TATGTAAATATAAAAACAAG+TGG | - | chr5.2:78700657-78700676 | MS.gene73502:intron | 15.0% |
| !! | TCTTATAAAAGTTTATCATT+AGG | - | chr5.2:78702038-78702057 | MS.gene73502:intron | 15.0% |
| !! | TTTATTAGCAAAGTAAATTT+AGG | - | chr5.2:78701702-78701721 | MS.gene73502:intron | 15.0% |
| !!! | AAATAAAGTATTTTTCTTTC+TGG | + | chr5.2:78699963-78699982 | None:intergenic | 15.0% |
| !!! | AAATCATTTTTGTATAACAT+TGG | - | chr5.2:78701126-78701145 | MS.gene73502:CDS | 15.0% |
| !!! | TAAATTTTTTACTTATGCTT+AGG | - | chr5.2:78702097-78702116 | MS.gene73502:intron | 15.0% |
| !!! | TTAATTTGTTGAAAAATGAT+GGG | + | chr5.2:78701852-78701871 | None:intergenic | 15.0% |
| !!! | TTTTTCACTTTTTTCTTATT+TGG | - | chr5.2:78702389-78702408 | MS.gene73502:intron | 15.0% |
| !! | AAAACATTGTTAAAATCTCT+TGG | - | chr5.2:78700336-78700355 | MS.gene73502:intron | 20.0% |
| !! | AAAGTAAATTTAGGTCTATA+AGG | - | chr5.2:78701711-78701730 | MS.gene73502:intron | 20.0% |
| !! | AAATATTCAGAAGATTGATT+TGG | - | chr5.2:78698001-78698020 | MS.gene73502:intron | 20.0% |
| !! | AATCATTGACATAAATACAT+TGG | + | chr5.2:78699080-78699099 | None:intergenic | 20.0% |
| !! | AATGAATTATATATCATGTC+AGG | + | chr5.2:78699860-78699879 | None:intergenic | 20.0% |
| !! | ACGTTATATGAAAATGTAAA+GGG | + | chr5.2:78700587-78700606 | None:intergenic | 20.0% |
| !! | ATCATTGACATAAATACATT+GGG | + | chr5.2:78699079-78699098 | None:intergenic | 20.0% |
| !! | ATGAATTATATATCATGTCA+GGG | + | chr5.2:78699859-78699878 | None:intergenic | 20.0% |
| !! | ATTAAAGATTCATATTGTTG+TGG | - | chr5.2:78702414-78702433 | MS.gene73502:intron | 20.0% |
| !! | CATCAGAAAAAATATCAAAA+TGG | + | chr5.2:78703039-78703058 | None:intergenic | 20.0% |
| !! | CATTCACAATATAAATTACA+TGG | + | chr5.2:78699439-78699458 | None:intergenic | 20.0% |
| !! | CGATTAAAAAATATTTACAC+TGG | - | chr5.2:78698982-78699001 | MS.gene73502:intron | 20.0% |
| !! | GTTTAAATAATTTAGTTGCA+TGG | + | chr5.2:78700202-78700221 | None:intergenic | 20.0% |
| !!! | AGATATTTTATACATAGTGT+AGG | + | chr5.2:78700151-78700170 | None:intergenic | 20.0% |
| !!! | ATATATATCCTATGTTACTT+TGG | + | chr5.2:78698287-78698306 | None:intergenic | 20.0% |
| !!! | ATTTTATATAACATACTCCA+AGG | + | chr5.2:78702470-78702489 | None:intergenic | 20.0% |
| !!! | CGAAGTATTATTAATTGAAA+TGG | - | chr5.2:78698580-78698599 | MS.gene73502:intron | 20.0% |
| !!! | CTTAATTTGTTGAAAAATGA+TGG | + | chr5.2:78701853-78701872 | None:intergenic | 20.0% |
| !!! | TGTATATTTTCTAACTTAAC+CGG | - | chr5.2:78702123-78702142 | MS.gene73502:intron | 20.0% |
| !!! | TGTCTCTTATATTTTTGTTT+TGG | - | chr5.2:78701751-78701770 | MS.gene73502:intron | 20.0% |
| !!! | TTTGTTATTGTTTATTGTAG+TGG | - | chr5.2:78697872-78697891 | MS.gene73502:intron | 20.0% |
| ! | AAAGAGTTCAAAAATACTGA+AGG | + | chr5.2:78701521-78701540 | None:intergenic | 25.0% |
| ! | AAGAAGTAAATATCTGAAAG+GGG | + | chr5.2:78700281-78700300 | None:intergenic | 25.0% |
| ! | AAGAGTTCAAAAATACTGAA+GGG | + | chr5.2:78701520-78701539 | None:intergenic | 25.0% |
| ! | AATTAAACAAGTAATAGTCG+TGG | - | chr5.2:78700003-78700022 | MS.gene73502:intron | 25.0% |
| ! | ACAAGAAGTAAATATCTGAA+AGG | + | chr5.2:78700283-78700302 | None:intergenic | 25.0% |
| ! | ATAGATTTAATTCACACACA+CGG | + | chr5.2:78699352-78699371 | None:intergenic | 25.0% |
| ! | ATATAGTGACCTTATAACAT+AGG | - | chr5.2:78698440-78698459 | MS.gene73502:CDS | 25.0% |
| ! | ATTATTTGCGTTAATTGAGT+GGG | - | chr5.2:78701910-78701929 | MS.gene73502:intron | 25.0% |
| ! | CAAACAATATTGTGAAATAG+TGG | - | chr5.2:78698417-78698436 | MS.gene73502:CDS | 25.0% |
| ! | CAAGAAGTAAATATCTGAAA+GGG | + | chr5.2:78700282-78700301 | None:intergenic | 25.0% |
| ! | CAATACTCTTATCATATCAT+GGG | - | chr5.2:78699744-78699763 | MS.gene73502:intron | 25.0% |
| ! | CACGTTATATGAAAATGTAA+AGG | + | chr5.2:78700588-78700607 | None:intergenic | 25.0% |
| ! | CATTGGAATATTCTCTTTAT+GGG | - | chr5.2:78698846-78698865 | MS.gene73502:intron | 25.0% |
| ! | CCAACATAGATAACAATAAT+CGG | + | chr5.2:78700432-78700451 | None:intergenic | 25.0% |
| ! | CGTTATATGAAAATGTAAAG+GGG | + | chr5.2:78700586-78700605 | None:intergenic | 25.0% |
| ! | CTAACATAATGAAAAAACAG+AGG | - | chr5.2:78700849-78700868 | MS.gene73502:intron | 25.0% |
| ! | CTTGATAAGAGTTTATATAG+AGG | + | chr5.2:78702797-78702816 | None:intergenic | 25.0% |
| ! | CTTGTCATATCTCAATTATT+TGG | - | chr5.2:78701988-78702007 | MS.gene73502:intron | 25.0% |
| ! | GTATACCATGTTGAAATTTA+GGG | - | chr5.2:78702726-78702745 | MS.gene73502:CDS | 25.0% |
| ! | TAACAAATATCTGACATTGT+TGG | - | chr5.2:78700403-78700422 | MS.gene73502:intron | 25.0% |
| ! | TACTACATAATTAACATGAC+TGG | + | chr5.2:78701812-78701831 | None:intergenic | 25.0% |
| ! | TATAGTGACCTTATAACATA+GGG | - | chr5.2:78698441-78698460 | MS.gene73502:CDS | 25.0% |
| ! | TATGTAAATACCAAGATGTA+CGG | + | chr5.2:78701878-78701897 | None:intergenic | 25.0% |
| ! | TATTATTTGCGTTAATTGAG+TGG | - | chr5.2:78701909-78701928 | MS.gene73502:intron | 25.0% |
| ! | TCAATACTCTTATCATATCA+TGG | - | chr5.2:78699743-78699762 | MS.gene73502:intron | 25.0% |
| ! | TGAAACAATAAAGTTTAGCT+AGG | + | chr5.2:78699830-78699849 | None:intergenic | 25.0% |
| ! | TGAATTATATATCATGTCAG+GGG | + | chr5.2:78699858-78699877 | None:intergenic | 25.0% |
| ! | TTGATGAGACTTTATAAAGT+GGG | + | chr5.2:78702593-78702612 | None:intergenic | 25.0% |
| ! | TTTCTTTACTCTCTTAATTC+AGG | + | chr5.2:78698553-78698572 | None:intergenic | 25.0% |
| !! | ACGTAACTTGTAATTTACTT+GGG | - | chr5.2:78702897-78702916 | MS.gene73502:intron | 25.0% |
| !! | ATTTCTCTTTTTCTTAGAAC+AGG | + | chr5.2:78700739-78700758 | None:intergenic | 25.0% |
| !! | GCTAGCTTAAAAGTAAAATT+TGG | + | chr5.2:78700633-78700652 | None:intergenic | 25.0% |
| !! | TGATATCTAAAATCAGAAAC+TGG | + | chr5.2:78701084-78701103 | None:intergenic | 25.0% |
| !! | TGTGTGATCAATTCTTTTAT+AGG | + | chr5.2:78698750-78698769 | None:intergenic | 25.0% |
| !! | TTTTGTAGATTACCATCAAA+TGG | - | chr5.2:78700495-78700514 | MS.gene73502:intron | 25.0% |
| !!! | AGTTTACAGTTCTAAAGTTT+GGG | + | chr5.2:78700224-78700243 | None:intergenic | 25.0% |
| !!! | ATGTTTACTCTTCTGAAATT+TGG | - | chr5.2:78700171-78700190 | MS.gene73502:intron | 25.0% |
| AAAAACAAGTGGCTTTCATT+TGG | - | chr5.2:78700668-78700687 | MS.gene73502:intron | 30.0% | |
| AACGCACAATCATATACATA+TGG | + | chr5.2:78699791-78699810 | None:intergenic | 30.0% | |
| AAGAGACAGTCCTAATATTT+AGG | + | chr5.2:78701739-78701758 | None:intergenic | 30.0% | |
| AAGTTTACAATGAAGCCAAA+AGG | - | chr5.2:78701404-78701423 | MS.gene73502:intron | 30.0% | |
| AATTGTTCAGTTAGAACCTT+AGG | + | chr5.2:78698685-78698704 | None:intergenic | 30.0% | |
| ACACCTTCTATCAGAAATAT+CGG | + | chr5.2:78698176-78698195 | None:intergenic | 30.0% | |
| AGAACTGTAAACTGTTTGAA+GGG | - | chr5.2:78700231-78700250 | MS.gene73502:intron | 30.0% | |
| AGCTCTTGAATTTCCATTAT+CGG | + | chr5.2:78697924-78697943 | None:intergenic | 30.0% | |
| AGGTTTCAACATATTAGAGT+TGG | + | chr5.2:78701448-78701467 | None:intergenic | 30.0% | |
| ATAGTGACCTTATAACATAG+GGG | - | chr5.2:78698442-78698461 | MS.gene73502:CDS | 30.0% | |
| ATATGTATATGATTGTGCGT+TGG | - | chr5.2:78699790-78699809 | MS.gene73502:intron | 30.0% | |
| ATGTGAACAGATATAGCTAT+TGG | + | chr5.2:78702855-78702874 | None:intergenic | 30.0% | |
| ATTGGCTAACTTTATAGACT+TGG | - | chr5.2:78701144-78701163 | MS.gene73502:CDS | 30.0% | |
| ATTGTTCAGTTAGAACCTTA+GGG | + | chr5.2:78698684-78698703 | None:intergenic | 30.0% | |
| CACAATATAAATTACATGGC+CGG | + | chr5.2:78699435-78699454 | None:intergenic | 30.0% | |
| CATTGATAAGATGATCCAAA+GGG | + | chr5.2:78701668-78701687 | None:intergenic | 30.0% | |
| CCATAAAGAGAATATTCCAA+TGG | + | chr5.2:78698848-78698867 | None:intergenic | 30.0% | |
| CCATTGGAATATTCTCTTTA+TGG | - | chr5.2:78698845-78698864 | MS.gene73502:intron | 30.0% | |
| CCGATTATTGTTATCTATGT+TGG | - | chr5.2:78700429-78700448 | MS.gene73502:intron | 30.0% | |
| CTTGATGAGACTTTATAAAG+TGG | + | chr5.2:78702594-78702613 | None:intergenic | 30.0% | |
| GATAAGAGTTTATATAGAGG+AGG | + | chr5.2:78702794-78702813 | None:intergenic | 30.0% | |
| GATGATCTTCATATTCTTTG+TGG | - | chr5.2:78703055-78703074 | MS.gene73502:CDS | 30.0% | |
| GATGTTTAATGATCCGATAA+TGG | - | chr5.2:78697908-78697927 | MS.gene73502:intron | 30.0% | |
| GGTATACCATGTTGAAATTT+AGG | - | chr5.2:78702725-78702744 | MS.gene73502:CDS | 30.0% | |
| GGTTTCAACATATTAGAGTT+GGG | + | chr5.2:78701447-78701466 | None:intergenic | 30.0% | |
| GTGAAGCTATTGTTGAAATT+GGG | - | chr5.2:78702522-78702541 | MS.gene73502:intron | 30.0% | |
| TAATCACACCAAAGTAACAT+AGG | - | chr5.2:78698276-78698295 | MS.gene73502:intron | 30.0% | |
| TAGAACTGTAAACTGTTTGA+AGG | - | chr5.2:78700230-78700249 | MS.gene73502:intron | 30.0% | |
| TCAACCGAATATCATCAAAT+AGG | - | chr5.2:78702991-78703010 | MS.gene73502:CDS | 30.0% | |
| TCATTGATAAGATGATCCAA+AGG | + | chr5.2:78701669-78701688 | None:intergenic | 30.0% | |
| TGAAGCTATTGTTGAAATTG+GGG | - | chr5.2:78702523-78702542 | MS.gene73502:intron | 30.0% | |
| TGATATAACGACCTTGAATT+CGG | - | chr5.2:78697962-78697981 | MS.gene73502:intron | 30.0% | |
| TGATGAGACTTTATAAAGTG+GGG | + | chr5.2:78702592-78702611 | None:intergenic | 30.0% | |
| TGTGAACAGATATAGCTATT+GGG | + | chr5.2:78702854-78702873 | None:intergenic | 30.0% | |
| TGTGAAGCTATTGTTGAAAT+TGG | - | chr5.2:78702521-78702540 | MS.gene73502:intron | 30.0% | |
| TTGGCTAACTTTATAGACTT+GGG | - | chr5.2:78701145-78701164 | MS.gene73502:CDS | 30.0% | |
| TTGTCAAATAGCAGATATAG+TGG | - | chr5.2:78699119-78699138 | MS.gene73502:intron | 30.0% | |
| TTGTTAAGTAGTGGTTATAG+CGG | - | chr5.2:78699208-78699227 | MS.gene73502:intron | 30.0% | |
| TTTAAGGAATTAGACTTCAG+AGG | + | chr5.2:78700465-78700484 | None:intergenic | 30.0% | |
| ! | AATGAATATGATCTCTGAAG+AGG | + | chr5.2:78697816-78697835 | None:intergenic | 30.0% |
| ! | CAATGTCAGATATTTGTTAG+CGG | + | chr5.2:78700402-78700421 | None:intergenic | 30.0% |
| ! | CACGTAACTTGTAATTTACT+TGG | - | chr5.2:78702896-78702915 | MS.gene73502:intron | 30.0% |
| ! | CATACATATTCTGTGTTGAT+AGG | - | chr5.2:78700051-78700070 | MS.gene73502:intron | 30.0% |
| ! | TAATTCATTTTCTGAGTCTC+AGG | - | chr5.2:78699871-78699890 | MS.gene73502:intron | 30.0% |
| ! | TTCTTTTATAGGACCATAAG+AGG | + | chr5.2:78698739-78698758 | None:intergenic | 30.0% |
| !! | CAGTTTACAGTTCTAAAGTT+TGG | + | chr5.2:78700225-78700244 | None:intergenic | 30.0% |
| !! | GTTTATTCATGTTTTCGAGA+GGG | + | chr5.2:78701374-78701393 | None:intergenic | 30.0% |
| !! | TACAAAGTGTTGTCAAATAG+TGG | - | chr5.2:78698506-78698525 | MS.gene73502:intron | 30.0% |
| !! | TACAAAGTGTTGTTAAGTAG+TGG | - | chr5.2:78699199-78699218 | MS.gene73502:intron | 30.0% |
| !! | TGTTTATTCATGTTTTCGAG+AGG | + | chr5.2:78701375-78701394 | None:intergenic | 30.0% |
| !! | TTCAATGCGGTTTTTCAATT+TGG | - | chr5.2:78701963-78701982 | MS.gene73502:intron | 30.0% |
| !!! | CGTTCATCTTTTTTGCATAT+GGG | + | chr5.2:78701303-78701322 | None:intergenic | 30.0% |
| !!! | TCGTTCATCTTTTTTGCATA+TGG | + | chr5.2:78701304-78701323 | None:intergenic | 30.0% |
| !!! | TTCAAGATGTTTTGACTACT+AGG | - | chr5.2:78698114-78698133 | MS.gene73502:intron | 30.0% |
| AAATTAAGCTCCGTACATCT+TGG | - | chr5.2:78701865-78701884 | MS.gene73502:intron | 35.0% | |
| AACATCTTGAAGATGCTTTG+TGG | + | chr5.2:78698105-78698124 | None:intergenic | 35.0% | |
| AACTTGTAATTTACTTGGGC+AGG | - | chr5.2:78702901-78702920 | MS.gene73502:intron | 35.0% | |
| AATGACTCCCAAATAATGCA+AGG | - | chr5.2:78700120-78700139 | MS.gene73502:intron | 35.0% | |
| ACAGCAAATTTACCACATGT+GGG | + | chr5.2:78702156-78702175 | None:intergenic | 35.0% | |
| ACCGAATATCATCAAATAGG+TGG | - | chr5.2:78702994-78703013 | MS.gene73502:CDS | 35.0% | |
| ACTCCAAGGTCTTAATTAAG+AGG | + | chr5.2:78702456-78702475 | None:intergenic | 35.0% | |
| AGAAAATCCTCTACCCTAAT+CGG | - | chr5.2:78700908-78700927 | MS.gene73502:intron | 35.0% | |
| AGAGTCTCATTTATTCGATG+TGG | - | chr5.2:78702612-78702631 | MS.gene73502:CDS | 35.0% | |
| AGAGTTTGCAACAAACATCA+GGG | - | chr5.2:78699594-78699613 | MS.gene73502:intron | 35.0% | |
| ATAGTGCTATAGAGCTTGAT+AGG | + | chr5.2:78698880-78698899 | None:intergenic | 35.0% | |
| ATATTCCAATGGATAGTGAG+AGG | + | chr5.2:78698837-78698856 | None:intergenic | 35.0% | |
| ATATTCTCTTTATGGGTCCT+AGG | - | chr5.2:78698853-78698872 | MS.gene73502:intron | 35.0% | |
| ATCTATCTGATGTGAGACTT+GGG | - | chr5.2:78702823-78702842 | MS.gene73502:intron | 35.0% | |
| ATTGAGTAGGATTCTGAACT+AGG | + | chr5.2:78701468-78701487 | None:intergenic | 35.0% | |
| CAAAACCATACCATTACTGA+TGG | + | chr5.2:78701559-78701578 | None:intergenic | 35.0% | |
| CACAAGATAGTTGTTCAATG+CGG | - | chr5.2:78701950-78701969 | MS.gene73502:intron | 35.0% | |
| CATTCACACAAAGTAACATC+TGG | - | chr5.2:78700985-78701004 | MS.gene73502:intron | 35.0% | |
| CATTTATTCGATGTGGGATT+GGG | - | chr5.2:78702619-78702638 | MS.gene73502:CDS | 35.0% | |
| CCAAATGTTTGTGTTTGTGT+CGG | - | chr5.2:78698225-78698244 | MS.gene73502:intron | 35.0% | |
| CCTTTGCAAACATTTGAAAG+CGG | - | chr5.2:78699660-78699679 | MS.gene73502:intron | 35.0% | |
| CTAACTCAACATCACAAAAC+TGG | - | chr5.2:78702547-78702566 | MS.gene73502:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr5.2:78702750-78702769 | MS.gene73502:CDS | 35.0% | |
| GAAATTTCTGAATGGAACAG+AGG | - | chr5.2:78700766-78700785 | MS.gene73502:intron | 35.0% | |
| GAGATCCATATAGTCAATCA+AGG | + | chr5.2:78699287-78699306 | None:intergenic | 35.0% | |
| GAGTCTCATTTATTCGATGT+GGG | - | chr5.2:78702613-78702632 | MS.gene73502:CDS | 35.0% | |
| GATGAGACTTTATAAAGTGG+GGG | + | chr5.2:78702591-78702610 | None:intergenic | 35.0% | |
| GCAATCCTTGATTGACTATA+TGG | - | chr5.2:78699279-78699298 | MS.gene73502:intron | 35.0% | |
| GCTTCCATGATTGGTATATT+AGG | + | chr5.2:78703081-78703100 | None:intergenic | 35.0% | |
| GTCAATTTGTCCATCAGTAA+TGG | - | chr5.2:78701546-78701565 | MS.gene73502:intron | 35.0% | |
| GTTGAATTCGGATCTTGAAT+AGG | + | chr5.2:78697630-78697649 | None:intergenic | 35.0% | |
| TAAAACCCCCCTATGTTATA+AGG | + | chr5.2:78698452-78698471 | None:intergenic | 35.0% | |
| TAGTGACCTTATAACATAGG+GGG | - | chr5.2:78698443-78698462 | MS.gene73502:CDS | 35.0% | |
| TAGTGGAATCTTCACACATT+TGG | - | chr5.2:78702328-78702347 | MS.gene73502:intron | 35.0% | |
| TATCTATCTGATGTGAGACT+TGG | - | chr5.2:78702822-78702841 | MS.gene73502:intron | 35.0% | |
| TCAGAATCCTACTCAATTGA+GGG | - | chr5.2:78701471-78701490 | MS.gene73502:intron | 35.0% | |
| TCATATCATGGGATAGTCAA+TGG | - | chr5.2:78699755-78699774 | MS.gene73502:intron | 35.0% | |
| TCATTTATTCGATGTGGGAT+TGG | - | chr5.2:78702618-78702637 | MS.gene73502:CDS | 35.0% | |
| TCTACTATTACCGAACTTAG+TGG | - | chr5.2:78702311-78702330 | MS.gene73502:intron | 35.0% | |
| TCTCCTCTTAATTAAGACCT+TGG | - | chr5.2:78702450-78702469 | MS.gene73502:intron | 35.0% | |
| TCTTGAATAGGAACTTTGAG+AGG | + | chr5.2:78697618-78697637 | None:intergenic | 35.0% | |
| TGTGAAGATTCCACTAAGTT+CGG | + | chr5.2:78702324-78702343 | None:intergenic | 35.0% | |
| TTAGAGACCTATTCACAAGA+TGG | - | chr5.2:78700818-78700837 | MS.gene73502:intron | 35.0% | |
| TTAGCGGTAGAAAAGAAATG+AGG | + | chr5.2:78700386-78700405 | None:intergenic | 35.0% | |
| TTAGGCCCTAAATTTCAACA+TGG | + | chr5.2:78702734-78702753 | None:intergenic | 35.0% | |
| TTATAGACTTGGGAGTTTGA+TGG | - | chr5.2:78701155-78701174 | MS.gene73502:CDS | 35.0% | |
| TTCAGAATCCTACTCAATTG+AGG | - | chr5.2:78701470-78701489 | MS.gene73502:intron | 35.0% | |
| TTGGACGAGTGTAGAATAAA+TGG | - | chr5.2:78701181-78701200 | MS.gene73502:CDS | 35.0% | |
| TTTGACTCCACAAATTGCTT+TGG | - | chr5.2:78701263-78701282 | MS.gene73502:intron | 35.0% | |
| TTTGGCTGATGAGAATTACT+CGG | - | chr5.2:78698019-78698038 | MS.gene73502:intron | 35.0% | |
| TTTGTCCATCAGTAATGGTA+TGG | - | chr5.2:78701551-78701570 | MS.gene73502:intron | 35.0% | |
| TTTGTGATGACTTGAAGAAC+AGG | - | chr5.2:78698069-78698088 | MS.gene73502:intron | 35.0% | |
| ! | AAAGCATCACAAATCGGATT+AGG | - | chr5.2:78697653-78697672 | MS.gene73502:intron | 35.0% |
| ! | CATGTCACACAATTTTTCTC+CGG | - | chr5.2:78699413-78699432 | MS.gene73502:intron | 35.0% |
| ! | CTATAAGGCGCCTAAATATT+AGG | - | chr5.2:78701726-78701745 | MS.gene73502:intron | 35.0% |
| ! | GAGCATTTGTAAGCTTGTTT+AGG | + | chr5.2:78702020-78702039 | None:intergenic | 35.0% |
| ! | GCATTTGTTGAATTAGACCA+CGG | + | chr5.2:78699563-78699582 | None:intergenic | 35.0% |
| ! | GCCACCTATTTGATGATATT+CGG | + | chr5.2:78702998-78703017 | None:intergenic | 35.0% |
| ! | TCAGCACTGAAATTTCTGAA+TGG | - | chr5.2:78700758-78700777 | MS.gene73502:intron | 35.0% |
| ! | TGATGCTTTTCGGTTGAATT+CGG | + | chr5.2:78697642-78697661 | None:intergenic | 35.0% |
| !! | AACCGAAAAGCATCACAAAT+CGG | - | chr5.2:78697647-78697666 | MS.gene73502:intron | 35.0% |
| !! | ATCCGATTTGTGATGCTTTT+CGG | + | chr5.2:78697652-78697671 | None:intergenic | 35.0% |
| !! | CAGTTTTGTGATGTTGAGTT+AGG | + | chr5.2:78702549-78702568 | None:intergenic | 35.0% |
| !! | GATGTTACTTTGTGTGAATG+AGG | + | chr5.2:78700985-78701004 | None:intergenic | 35.0% |
| !! | TGTCACTTTCTAGTTCTACT+TGG | - | chr5.2:78699684-78699703 | MS.gene73502:intron | 35.0% |
| !! | TTGAAAAATGATGGGCGTTA+TGG | + | chr5.2:78701844-78701863 | None:intergenic | 35.0% |
| !!! | AGTAATGGTATGGTTTTGTC+TGG | - | chr5.2:78701561-78701580 | MS.gene73502:intron | 35.0% |
| !!! | ATTTTTGGCATGACCGATTA+GGG | + | chr5.2:78700924-78700943 | None:intergenic | 35.0% |
| AACCTCTGCTACTATGTCAT+CGG | + | chr5.2:78699929-78699948 | None:intergenic | 40.0% | |
| ACGAAGACTATGCTCAAAGT+CGG | - | chr5.2:78702264-78702283 | MS.gene73502:intron | 40.0% | |
| ACGGAGACTCTCAAGAAAAT+CGG | - | chr5.2:78697548-78697567 | MS.gene73502:CDS | 40.0% | |
| ACTCACAACAAGTTTAGCCT+TGG | - | chr5.2:78701229-78701248 | MS.gene73502:intron | 40.0% | |
| ACTCGAAAGTTTGACGAACA+TGG | + | chr5.2:78701047-78701066 | None:intergenic | 40.0% | |
| AGACCTATTCACAAGATGGT+AGG | - | chr5.2:78700822-78700841 | MS.gene73502:intron | 40.0% | |
| AGGGGATTCAAACGATAACA+AGG | + | chr5.2:78700263-78700282 | None:intergenic | 40.0% | |
| AGTGACCTTATAACATAGGG+GGG | - | chr5.2:78698444-78698463 | MS.gene73502:CDS | 40.0% | |
| ATATAGTGGCGCTATAGCAT+AGG | - | chr5.2:78699133-78699152 | MS.gene73502:intron | 40.0% | |
| ATCCAAAACAGCCGAATTCA+AGG | + | chr5.2:78697976-78697995 | None:intergenic | 40.0% | |
| ATTTGCGTTAATTGAGTGGG+CGG | - | chr5.2:78701913-78701932 | MS.gene73502:intron | 40.0% | |
| CAAGTCATCACAAACAGCAT+TGG | + | chr5.2:78698063-78698082 | None:intergenic | 40.0% | |
| CAGAATCCTACTCAATTGAG+GGG | - | chr5.2:78701472-78701491 | MS.gene73502:intron | 40.0% | |
| CAGGATACCAAAGCAATTTG+TGG | + | chr5.2:78701273-78701292 | None:intergenic | 40.0% | |
| CAGTTAGAACCTTAGGGTAT+GGG | + | chr5.2:78698678-78698697 | None:intergenic | 40.0% | |
| CCGACACAAACACAAACATT+TGG | + | chr5.2:78698228-78698247 | None:intergenic | 40.0% | |
| CCGCTTTCAAATGTTTGCAA+AGG | + | chr5.2:78699663-78699682 | None:intergenic | 40.0% | |
| CGAAGAAATGCTTCCATGAT+TGG | + | chr5.2:78703090-78703109 | None:intergenic | 40.0% | |
| CTCGAAAGTTTGACGAACAT+GGG | + | chr5.2:78701046-78701065 | None:intergenic | 40.0% | |
| CTTCACACATTTGGCTACAA+TGG | - | chr5.2:78702337-78702356 | MS.gene73502:intron | 40.0% | |
| CTTTGTGTGAATGAGGTTAG+TGG | + | chr5.2:78700978-78700997 | None:intergenic | 40.0% | |
| GACAGCAAATTTACCACATG+TGG | + | chr5.2:78702157-78702176 | None:intergenic | 40.0% | |
| GACATCAGTATAGTCAACCT+AGG | + | chr5.2:78698942-78698961 | None:intergenic | 40.0% | |
| GACCTATTCACAAGATGGTA+GGG | - | chr5.2:78700823-78700842 | MS.gene73502:intron | 40.0% | |
| GAGAGTTTGCAACAAACATC+AGG | - | chr5.2:78699593-78699612 | MS.gene73502:intron | 40.0% | |
| GAGCTCACAGTTCTTTATTG+AGG | - | chr5.2:78702964-78702983 | MS.gene73502:intron | 40.0% | |
| GAGTCATTGGCAAATGTTGA+AGG | - | chr5.2:78702942-78702961 | MS.gene73502:intron | 40.0% | |
| GATTCAAATGAGGGAAAGAG+GGG | + | chr5.2:78700951-78700970 | None:intergenic | 40.0% | |
| GCATTTCTTCGCGACTTATT+TGG | - | chr5.2:78703099-78703118 | MS.gene73502:CDS | 40.0% | |
| GGAAAAAGAGAAAACACGCA+TGG | + | chr5.2:78698792-78698811 | None:intergenic | 40.0% | |
| GGATTCAAATGAGGGAAAGA+GGG | + | chr5.2:78700952-78700971 | None:intergenic | 40.0% | |
| GGGGATTCAAACGATAACAA+GGG | + | chr5.2:78700262-78700281 | None:intergenic | 40.0% | |
| GGTATACCTGTCGAATTCAA+GGG | + | chr5.2:78702713-78702732 | None:intergenic | 40.0% | |
| GTGGCCTAATATACCAATCA+TGG | - | chr5.2:78703074-78703093 | MS.gene73502:CDS | 40.0% | |
| TACATTCCCCTCAATTGAGT+AGG | + | chr5.2:78701481-78701500 | None:intergenic | 40.0% | |
| TATAGAGCTTGATAGGACCT+AGG | + | chr5.2:78698873-78698892 | None:intergenic | 40.0% | |
| TATAGTGGCGCTATAGCATA+GGG | - | chr5.2:78699134-78699153 | MS.gene73502:intron | 40.0% | |
| TCAGTTAGAACCTTAGGGTA+TGG | + | chr5.2:78698679-78698698 | None:intergenic | 40.0% | |
| TCATGTACCCTAGAACATCA+AGG | - | chr5.2:78699463-78699482 | MS.gene73502:intron | 40.0% | |
| TCATTTGTGCTCAGAGCTAT+GGG | + | chr5.2:78701346-78701365 | None:intergenic | 40.0% | |
| TCGAAAGTTTGACGAACATG+GGG | + | chr5.2:78701045-78701064 | None:intergenic | 40.0% | |
| TGACAACATGGATGAGTCAT+TGG | - | chr5.2:78702929-78702948 | MS.gene73502:intron | 40.0% | |
| TGGTATACCTGTCGAATTCA+AGG | + | chr5.2:78702714-78702733 | None:intergenic | 40.0% | |
| TTACTGTCTCATGAACCCTT+TGG | - | chr5.2:78701650-78701669 | MS.gene73502:intron | 40.0% | |
| TTCATTTGTGCTCAGAGCTA+TGG | + | chr5.2:78701347-78701366 | None:intergenic | 40.0% | |
| TTTGCATATGGGTTTGTGTC+AGG | + | chr5.2:78701292-78701311 | None:intergenic | 40.0% | |
| TTTGTTGAATTAGACCACGG+TGG | + | chr5.2:78699560-78699579 | None:intergenic | 40.0% | |
| ! | GCACCGATATTTCTGATAGA+AGG | - | chr5.2:78698170-78698189 | MS.gene73502:intron | 40.0% |
| ! | GTCAAAGTGCTATAACTCCA+AGG | + | chr5.2:78701249-78701268 | None:intergenic | 40.0% |
| ! | TAGGAACTTTGAGAGGTAGA+CGG | + | chr5.2:78697611-78697630 | None:intergenic | 40.0% |
| !! | CGATTTTCTGAGAGGTTTCA+TGG | + | chr5.2:78697682-78697701 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr5.2:78702752-78702771 | None:intergenic | 40.0% |
| !! | TCGCTATTTTCTACGATCCT+AGG | - | chr5.2:78698922-78698941 | MS.gene73502:intron | 40.0% |
| !! | TGGCTTTCATTTGGTTCTCA+TGG | - | chr5.2:78700677-78700696 | MS.gene73502:intron | 40.0% |
| !!! | CATTTTTGGCATGACCGATT+AGG | + | chr5.2:78700925-78700944 | None:intergenic | 40.0% |
| !!! | TGTTTTGACTACTAGGACAG+AGG | - | chr5.2:78698121-78698140 | MS.gene73502:intron | 40.0% |
| AAACACTCCATCCCAGCAAA+TGG | - | chr5.2:78702208-78702227 | MS.gene73502:intron | 45.0% | |
| AAACCTCTCAGAAAATCGCC+AGG | - | chr5.2:78697684-78697703 | MS.gene73502:CDS | 45.0% | |
| AAAGTTTGACGAACATGGGG+AGG | + | chr5.2:78701042-78701061 | None:intergenic | 45.0% | |
| ACATCAAGGCTCACGAGAAT+AGG | - | chr5.2:78699477-78699496 | MS.gene73502:intron | 45.0% | |
| ACCTCTGCTACTATGTCATC+GGG | + | chr5.2:78699928-78699947 | None:intergenic | 45.0% | |
| ACTCACCTCTCACTATCCAT+TGG | - | chr5.2:78698829-78698848 | MS.gene73502:intron | 45.0% | |
| AGGACCATAAGAGGATGTGA+AGG | + | chr5.2:78698730-78698749 | None:intergenic | 45.0% | |
| AGGATGTGAAGGCAGATAGA+GGG | + | chr5.2:78698719-78698738 | None:intergenic | 45.0% | |
| ATAGTGGCGCTATAGCATAG+GGG | - | chr5.2:78699135-78699154 | MS.gene73502:intron | 45.0% | |
| ATCAAGGAGAGCTAGCTATC+AGG | - | chr5.2:78702366-78702385 | MS.gene73502:intron | 45.0% | |
| ATGGATAGTGAGAGGTGAGT+AGG | + | chr5.2:78698829-78698848 | None:intergenic | 45.0% | |
| CAGAGACATCTCCATTTGCT+GGG | + | chr5.2:78702222-78702241 | None:intergenic | 45.0% | |
| CATTTGTGCTCAGAGCTATG+GGG | + | chr5.2:78701345-78701364 | None:intergenic | 45.0% | |
| CGAAGACTATGCTCAAAGTC+GGG | - | chr5.2:78702265-78702284 | MS.gene73502:intron | 45.0% | |
| CTCCCAAATAATGCAAGGCT+AGG | - | chr5.2:78700125-78700144 | MS.gene73502:intron | 45.0% | |
| CTGATGCTGTAAAGGGTTCT+TGG | + | chr5.2:78699516-78699535 | None:intergenic | 45.0% | |
| GACACGACAAACACATGTGT+CGG | + | chr5.2:78698206-78698225 | None:intergenic | 45.0% | |
| GACTTGAAGAACAGGCTCAT+GGG | - | chr5.2:78698077-78698096 | MS.gene73502:intron | 45.0% | |
| GAGACTCTCAAGAAAATCGG+CGG | - | chr5.2:78697551-78697570 | MS.gene73502:CDS | 45.0% | |
| GATTCGTCTTTATCCTGCTG+TGG | - | chr5.2:78703121-78703140 | MS.gene73502:CDS | 45.0% | |
| GCCAAAGCAACTAAGTGAAG+AGG | - | chr5.2:78703154-78703173 | MS.gene73502:CDS | 45.0% | |
| GCCTCTTCACTTAGTTGCTT+TGG | + | chr5.2:78703158-78703177 | None:intergenic | 45.0% | |
| GCTGTCATTGCTGATACAGA+CGG | - | chr5.2:78702171-78702190 | MS.gene73502:intron | 45.0% | |
| GCTTTGGCTGATGCTGTAAA+GGG | + | chr5.2:78699523-78699542 | None:intergenic | 45.0% | |
| GGGATTCAAATGAGGGAAAG+AGG | + | chr5.2:78700953-78700972 | None:intergenic | 45.0% | |
| GTGTGAATGAGGTTAGTGGT+GGG | + | chr5.2:78700974-78700993 | None:intergenic | 45.0% | |
| TATGTCATCGGGTGAGTGTT+AGG | + | chr5.2:78699917-78699936 | None:intergenic | 45.0% | |
| TCGTGAGCCTTGATGTTCTA+GGG | + | chr5.2:78699473-78699492 | None:intergenic | 45.0% | |
| TCTGCCTTCACATCCTCTTA+TGG | - | chr5.2:78698723-78698742 | MS.gene73502:intron | 45.0% | |
| TGACTTGAAGAACAGGCTCA+TGG | - | chr5.2:78698076-78698095 | MS.gene73502:intron | 45.0% | |
| TGCCCTACCATCTTGTGAAT+AGG | + | chr5.2:78700828-78700847 | None:intergenic | 45.0% | |
| TGTGAATGAGGTTAGTGGTG+GGG | + | chr5.2:78700973-78700992 | None:intergenic | 45.0% | |
| TGTGTGAATGAGGTTAGTGG+TGG | + | chr5.2:78700975-78700994 | None:intergenic | 45.0% | |
| TTGGTTGTGCGTGAATAGGT+AGG | - | chr5.2:78702684-78702703 | MS.gene73502:CDS | 45.0% | |
| ! | AGTGGTGGGGATTCAAATGA+GGG | + | chr5.2:78700960-78700979 | None:intergenic | 45.0% |
| ! | ATACAGACGGAGATTAGCTG+TGG | - | chr5.2:78702184-78702203 | MS.gene73502:intron | 45.0% |
| ! | CTTGGGAGTTTGATGGCAAT+TGG | - | chr5.2:78701162-78701181 | MS.gene73502:CDS | 45.0% |
| ! | GACCTTGAATTCGGCTGTTT+TGG | - | chr5.2:78697971-78697990 | MS.gene73502:intron | 45.0% |
| ! | GAGGTAGACGGTTGTTGATT+CGG | + | chr5.2:78697599-78697618 | None:intergenic | 45.0% |
| ! | GATAGCTAGCTCTCCTTGAT+GGG | + | chr5.2:78702366-78702385 | None:intergenic | 45.0% |
| ! | TAGTGGTGGGGATTCAAATG+AGG | + | chr5.2:78700961-78700980 | None:intergenic | 45.0% |
| ! | TGATAGCTAGCTCTCCTTGA+TGG | + | chr5.2:78702367-78702386 | None:intergenic | 45.0% |
| !! | AAATGATGGGCGTTATGGCA+AGG | + | chr5.2:78701839-78701858 | None:intergenic | 45.0% |
| !! | AGGCCTAGCCTTGCATTATT+TGG | + | chr5.2:78700131-78700150 | None:intergenic | 45.0% |
| !! | CAAAACTGGCTTGTGAAGTG+AGG | - | chr5.2:78702561-78702580 | MS.gene73502:CDS | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr5.2:78702759-78702778 | MS.gene73502:CDS | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr5.2:78702762-78702781 | None:intergenic | 45.0% |
| !! | GAGTAGGCAAGTTGGTTAGA+GGG | + | chr5.2:78698813-78698832 | None:intergenic | 45.0% |
| !! | GGCAATTTTGTTTCCACAGC+AGG | + | chr5.2:78703137-78703156 | None:intergenic | 45.0% |
| !! | GGCCTAGCCTTGCATTATTT+GGG | + | chr5.2:78700130-78700149 | None:intergenic | 45.0% |
| !! | TGAGTAGGCAAGTTGGTTAG+AGG | + | chr5.2:78698814-78698833 | None:intergenic | 45.0% |
| !!! | TATTAATTGATTTTTATTTT+TGG | - | chr5.2:78697845-78697864 | MS.gene73502:intron | 5.0% |
| AACACGCATGGCAAAGAGTG+AGG | + | chr5.2:78698780-78698799 | None:intergenic | 50.0% | |
| AACCAAGCCCAATGAGTGCT+GGG | + | chr5.2:78702670-78702689 | None:intergenic | 50.0% | |
| AACCTTAGCTGATTGCCAGC+TGG | + | chr5.2:78700525-78700544 | None:intergenic | 50.0% | |
| ACACGCATGGCAAAGAGTGA+GGG | + | chr5.2:78698779-78698798 | None:intergenic | 50.0% | |
| ACCACATGTGGGCATATAGC+CGG | + | chr5.2:78702145-78702164 | None:intergenic | 50.0% | |
| ACCCGATGACATAGTAGCAG+AGG | - | chr5.2:78699924-78699943 | MS.gene73502:intron | 50.0% | |
| ACCTTAGCTGATTGCCAGCT+GGG | + | chr5.2:78700524-78700543 | None:intergenic | 50.0% | |
| ACTCTCAAGAAAATCGGCGG+CGG | - | chr5.2:78697554-78697573 | MS.gene73502:CDS | 50.0% | |
| AGAGTTGGGTTCATTCGCCA+TGG | + | chr5.2:78701433-78701452 | None:intergenic | 50.0% | |
| ATGAAGCCAAAAGGCCACCA+TGG | - | chr5.2:78701413-78701432 | MS.gene73502:intron | 50.0% | |
| CCAGAGACATCTCCATTTGC+TGG | + | chr5.2:78702223-78702242 | None:intergenic | 50.0% | |
| CCAGCAAATGGAGATGTCTC+TGG | - | chr5.2:78702220-78702239 | MS.gene73502:intron | 50.0% | |
| CCAGCTGGGATTCCATTTGA+TGG | + | chr5.2:78700510-78700529 | None:intergenic | 50.0% | |
| CCATCAAATGGAATCCCAGC+TGG | - | chr5.2:78700507-78700526 | MS.gene73502:intron | 50.0% | |
| CTCGTGAGCCTTGATGTTCT+AGG | + | chr5.2:78699474-78699493 | None:intergenic | 50.0% | |
| CTTTCTCTGCCCATACCCTA+AGG | - | chr5.2:78698666-78698685 | MS.gene73502:intron | 50.0% | |
| GAGCTTGTCAGTGTCGTGTT+CGG | + | chr5.2:78697751-78697770 | None:intergenic | 50.0% | |
| GAGGATGTGAAGGCAGATAG+AGG | + | chr5.2:78698720-78698739 | None:intergenic | 50.0% | |
| GATTAACCCCTGCAATCCCA+GGG | - | chr5.2:78698617-78698636 | MS.gene73502:intron | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | + | chr5.2:78702772-78702791 | None:intergenic | 50.0% | |
| GCTACAATGGTTGCCCATCA+AGG | - | chr5.2:78702350-78702369 | MS.gene73502:intron | 50.0% | |
| GGCTGATGAGAATTACTCGG+AGG | - | chr5.2:78698022-78698041 | MS.gene73502:intron | 50.0% | |
| GGCTTGGCTGGATCATCATT+CGG | + | chr5.2:78701013-78701032 | None:intergenic | 50.0% | |
| GTGGCTATATCAGCGCTCAT+AGG | - | chr5.2:78698525-78698544 | MS.gene73502:intron | 50.0% | |
| GTTGAATTAGACCACGGTGG+TGG | + | chr5.2:78699557-78699576 | None:intergenic | 50.0% | |
| GTTGTGCGTGAATAGGTAGG+TGG | - | chr5.2:78702687-78702706 | MS.gene73502:CDS | 50.0% | |
| TCAAATGAGGGAAAGAGGGG+AGG | + | chr5.2:78700948-78700967 | None:intergenic | 50.0% | |
| TGAGAGGTGAGTAGGCAAGT+TGG | + | chr5.2:78698821-78698840 | None:intergenic | 50.0% | |
| TGAGAGTCTCCGTCAGTGAT+CGG | + | chr5.2:78697541-78697560 | None:intergenic | 50.0% | |
| TGAGCATAGTCTTCGTGTCG+AGG | + | chr5.2:78702260-78702279 | None:intergenic | 50.0% | |
| TGATTAACCCCTGCAATCCC+AGG | - | chr5.2:78698616-78698635 | MS.gene73502:intron | 50.0% | |
| TTGCTTACACTTTGCGAGCC+TGG | + | chr5.2:78697705-78697724 | None:intergenic | 50.0% | |
| TTTGACGAACATGGGGAGGA+GGG | + | chr5.2:78701038-78701057 | None:intergenic | 50.0% | |
| ! | GACATCTCCATTTGCTGGGA+TGG | + | chr5.2:78702218-78702237 | None:intergenic | 50.0% |
| ! | GGCTTTGGCTGATGCTGTAA+AGG | + | chr5.2:78699524-78699543 | None:intergenic | 50.0% |
| ! | GGGCAGGATTGATGACAACA+TGG | - | chr5.2:78702917-78702936 | MS.gene73502:intron | 50.0% |
| ! | GGTGGTTCAGTAGTTGGCTT+TGG | + | chr5.2:78699539-78699558 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr5.2:78702764-78702783 | MS.gene73502:CDS | 50.0% |
| !! | GTAGACGGTTGTTGATTCGG+CGG | + | chr5.2:78697596-78697615 | None:intergenic | 50.0% |
| !!! | GGAAAGAGGGGAGGCATTTT+TGG | + | chr5.2:78700939-78700958 | None:intergenic | 50.0% |
| AACTTACCGCGATCGCACGT+CGG | - | chr5.2:78697511-78697530 | MS.gene73502:CDS | 55.0% | |
| ACCGGCTATATGCCCACATG+TGG | - | chr5.2:78702141-78702160 | MS.gene73502:intron | 55.0% | |
| ACTGAAGGGCAGACGACAGT+GGG | + | chr5.2:78701506-78701525 | None:intergenic | 55.0% | |
| AGCTTTGCCCTGGGATTGCA+GGG | + | chr5.2:78698627-78698646 | None:intergenic | 55.0% | |
| AGGTGGCCCTTGAATTCGAC+AGG | - | chr5.2:78702704-78702723 | MS.gene73502:CDS | 55.0% | |
| ATGGCAAAGAGTGAGGGGTG+AGG | + | chr5.2:78698773-78698792 | None:intergenic | 55.0% | |
| CAACCAAGCCCAATGAGTGC+TGG | + | chr5.2:78702671-78702690 | None:intergenic | 55.0% | |
| CAACTACTGAACCACCACCG+TGG | - | chr5.2:78699543-78699562 | MS.gene73502:intron | 55.0% | |
| CACGCATGGCAAAGAGTGAG+GGG | + | chr5.2:78698778-78698797 | None:intergenic | 55.0% | |
| GGAGATGTCTCTGGTACAGC+AGG | - | chr5.2:78702229-78702248 | MS.gene73502:intron | 55.0% | |
| GGCAAGTGCTCTGCACAATG+TGG | - | chr5.2:78702286-78702305 | MS.gene73502:intron | 55.0% | |
| GGCATGACCGATTAGGGTAG+AGG | + | chr5.2:78700918-78700937 | None:intergenic | 55.0% | |
| GTCGGAGTTCCGATCACTGA+CGG | - | chr5.2:78697529-78697548 | MS.gene73502:CDS | 55.0% | |
| GTTGGGTTCATTCGCCATGG+TGG | + | chr5.2:78701430-78701449 | None:intergenic | 55.0% | |
| GTTTGACGAACATGGGGAGG+AGG | + | chr5.2:78701039-78701058 | None:intergenic | 55.0% | |
| TACTGAAGGGCAGACGACAG+TGG | + | chr5.2:78701507-78701526 | None:intergenic | 55.0% | |
| TCCCAGCTGGCAATCAGCTA+AGG | - | chr5.2:78700520-78700539 | MS.gene73502:intron | 55.0% | |
| TCTCTGCAGAGCTTTGCCCT+GGG | + | chr5.2:78698636-78698655 | None:intergenic | 55.0% | |
| TTCTCTGCAGAGCTTTGCCC+TGG | + | chr5.2:78698637-78698656 | None:intergenic | 55.0% | |
| ! | CACGGTGGTGGTTCAGTAGT+TGG | + | chr5.2:78699545-78699564 | None:intergenic | 55.0% |
| ! | CATTCGCCATGGTGGCCTTT+TGG | + | chr5.2:78701422-78701441 | None:intergenic | 55.0% |
| ! | GAGCCTGGCGATTTTCTGAG+AGG | + | chr5.2:78697690-78697709 | None:intergenic | 55.0% |
| ! | GGGCTTGGTTGTGCGTGAAT+AGG | - | chr5.2:78702680-78702699 | MS.gene73502:CDS | 55.0% |
| !! | TTGTTGATTCGGCGGTGCAG+TGG | + | chr5.2:78697588-78697607 | None:intergenic | 55.0% |
| AAGAAAATCGGCGGCGGAGG+CGG | - | chr5.2:78697560-78697579 | MS.gene73502:CDS | 60.0% | |
| ACGAACATGGGGAGGAGGGT+TGG | + | chr5.2:78701034-78701053 | None:intergenic | 60.0% | |
| CCTCACGCCCAGCACTCATT+GGG | - | chr5.2:78702660-78702679 | MS.gene73502:CDS | 60.0% | |
| CTCAAGAAAATCGGCGGCGG+AGG | - | chr5.2:78697557-78697576 | MS.gene73502:CDS | 60.0% | |
| GAGCTTTGCCCTGGGATTGC+AGG | + | chr5.2:78698628-78698647 | None:intergenic | 60.0% | |
| GCTTTGCCCTGGGATTGCAG+GGG | + | chr5.2:78698626-78698645 | None:intergenic | 60.0% | |
| !! | AATGAGTGCTGGGCGTGAGG+GGG | + | chr5.2:78702660-78702679 | None:intergenic | 60.0% |
| !! | CAATGAGTGCTGGGCGTGAG+GGG | + | chr5.2:78702661-78702680 | None:intergenic | 60.0% |
| !! | CCAATGAGTGCTGGGCGTGA+GGG | + | chr5.2:78702662-78702681 | None:intergenic | 60.0% |
| CCCTCACGCCCAGCACTCAT+TGG | - | chr5.2:78702659-78702678 | MS.gene73502:CDS | 65.0% | |
| CGCCCAGCACTCATTGGGCT+TGG | - | chr5.2:78702665-78702684 | MS.gene73502:CDS | 65.0% | |
| GGAACTCCGACGTGCGATCG+CGG | + | chr5.2:78697520-78697539 | None:intergenic | 65.0% | |
| ! | GGGCGTGAGGGGGGTGTATT+GGG | + | chr5.2:78702650-78702669 | None:intergenic | 65.0% |
| ! | TGGGCGTGAGGGGGGTGTAT+TGG | + | chr5.2:78702651-78702670 | None:intergenic | 65.0% |
| !! | ATGAGTGCTGGGCGTGAGGG+GGG | + | chr5.2:78702659-78702678 | None:intergenic | 65.0% |
| !! | CATGGGGAGGAGGGTTGGCT+TGG | + | chr5.2:78701029-78701048 | None:intergenic | 65.0% |
| !! | CCCAATGAGTGCTGGGCGTG+AGG | + | chr5.2:78702663-78702682 | None:intergenic | 65.0% |
| !! | GGGAGGAGGGTTGGCTTGGC+TGG | + | chr5.2:78701025-78701044 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 78697503 | 78703187 | 78697503 | ID=MS.gene73502 |
| chr5.2 | mRNA | 78697503 | 78703187 | 78697503 | ID=MS.gene73502.t1;Parent=MS.gene73502 |
| chr5.2 | exon | 78702974 | 78703187 | 78702974 | ID=MS.gene73502.t1.exon1;Parent=MS.gene73502.t1 |
| chr5.2 | CDS | 78702974 | 78703187 | 78702974 | ID=cds.MS.gene73502.t1;Parent=MS.gene73502.t1 |
| chr5.2 | exon | 78702548 | 78702798 | 78702548 | ID=MS.gene73502.t1.exon2;Parent=MS.gene73502.t1 |
| chr5.2 | CDS | 78702548 | 78702798 | 78702548 | ID=cds.MS.gene73502.t1;Parent=MS.gene73502.t1 |
| chr5.2 | exon | 78701075 | 78701214 | 78701075 | ID=MS.gene73502.t1.exon3;Parent=MS.gene73502.t1 |
| chr5.2 | CDS | 78701075 | 78701214 | 78701075 | ID=cds.MS.gene73502.t1;Parent=MS.gene73502.t1 |
| chr5.2 | exon | 78700149 | 78700187 | 78700149 | ID=MS.gene73502.t1.exon4;Parent=MS.gene73502.t1 |
| chr5.2 | CDS | 78700149 | 78700187 | 78700149 | ID=cds.MS.gene73502.t1;Parent=MS.gene73502.t1 |
| chr5.2 | exon | 78698303 | 78698500 | 78698303 | ID=MS.gene73502.t1.exon5;Parent=MS.gene73502.t1 |
| chr5.2 | CDS | 78698303 | 78698500 | 78698303 | ID=cds.MS.gene73502.t1;Parent=MS.gene73502.t1 |
| chr5.2 | exon | 78697678 | 78697767 | 78697678 | ID=MS.gene73502.t1.exon6;Parent=MS.gene73502.t1 |
| chr5.2 | CDS | 78697678 | 78697767 | 78697678 | ID=cds.MS.gene73502.t1;Parent=MS.gene73502.t1 |
| chr5.2 | exon | 78697503 | 78697590 | 78697503 | ID=MS.gene73502.t1.exon7;Parent=MS.gene73502.t1 |
| chr5.2 | CDS | 78697503 | 78697590 | 78697503 | ID=cds.MS.gene73502.t1;Parent=MS.gene73502.t1 |
| Gene Sequence |
| Protein sequence |
