Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73533.t1 | XP_024631145.1 | 81.9 | 421 | 41 | 1 | 1 | 386 | 1 | 421 | 1.00E-190 | 676 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73533.t1 | Q9FZ70 | 36.1 | 418 | 214 | 12 | 15 | 385 | 3 | 414 | 3.6e-51 | 203.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73533.t1 | G7I5B2 | 81.9 | 420 | 41 | 1 | 2 | 386 | 12 | 431 | 2.8e-190 | 674.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052982 | MS.gene73533 | 0.800874 | 1.17E-48 | -1.69E-46 |
| MS.gene056346 | MS.gene73533 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene059517 | MS.gene73533 | 0.804475 | 2.12E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene73533 | 0.801373 | 9.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73533.t1 | MTR_1g021820 | 81.905 | 420 | 41 | 1 | 2 | 386 | 12 | 431 | 0.0 | 671 |
| MS.gene73533.t1 | MTR_1g021825 | 71.897 | 427 | 75 | 5 | 3 | 386 | 2 | 426 | 0.0 | 590 |
| MS.gene73533.t1 | MTR_1g021825 | 71.562 | 429 | 77 | 5 | 1 | 386 | 71 | 497 | 0.0 | 589 |
| MS.gene73533.t1 | MTR_1g013580 | 52.546 | 432 | 150 | 12 | 4 | 384 | 3 | 430 | 2.74e-138 | 401 |
| MS.gene73533.t1 | MTR_2g047872 | 50.688 | 436 | 161 | 8 | 2 | 386 | 5 | 437 | 1.83e-133 | 390 |
| MS.gene73533.t1 | MTR_1g013560 | 49.541 | 436 | 166 | 7 | 2 | 385 | 3 | 436 | 1.14e-132 | 387 |
| MS.gene73533.t1 | MTR_2g047848 | 50.118 | 425 | 158 | 8 | 12 | 384 | 1 | 423 | 7.05e-130 | 380 |
| MS.gene73533.t1 | MTR_4g057725 | 50.913 | 438 | 159 | 9 | 1 | 384 | 3 | 438 | 1.14e-129 | 380 |
| MS.gene73533.t1 | MTR_5g040850 | 50.718 | 418 | 159 | 7 | 12 | 384 | 1 | 416 | 3.12e-127 | 373 |
| MS.gene73533.t1 | MTR_1g011400 | 51.773 | 423 | 151 | 8 | 14 | 385 | 3 | 423 | 8.50e-127 | 372 |
| MS.gene73533.t1 | MTR_2g047858 | 50.708 | 424 | 156 | 8 | 14 | 386 | 111 | 532 | 7.20e-126 | 373 |
| MS.gene73533.t1 | MTR_1g014450 | 47.917 | 432 | 171 | 9 | 7 | 387 | 3 | 431 | 5.71e-124 | 365 |
| MS.gene73533.t1 | MTR_2g091145 | 46.882 | 433 | 179 | 8 | 2 | 384 | 5 | 436 | 4.41e-121 | 358 |
| MS.gene73533.t1 | MTR_1g016340 | 47.523 | 444 | 169 | 12 | 1 | 386 | 5 | 442 | 1.01e-120 | 357 |
| MS.gene73533.t1 | MTR_1g016340 | 48.260 | 431 | 161 | 11 | 14 | 386 | 11 | 437 | 4.52e-120 | 355 |
| MS.gene73533.t1 | MTR_1g011430 | 50.864 | 405 | 125 | 7 | 12 | 386 | 1 | 361 | 5.49e-119 | 350 |
| MS.gene73533.t1 | MTR_1g013840 | 50.597 | 419 | 156 | 9 | 16 | 384 | 54 | 471 | 2.25e-117 | 350 |
| MS.gene73533.t1 | MTR_1g013560 | 47.536 | 345 | 135 | 4 | 2 | 302 | 3 | 345 | 5.05e-102 | 306 |
| MS.gene73533.t1 | MTR_1g011410 | 51.032 | 339 | 124 | 4 | 7 | 305 | 302 | 638 | 4.54e-99 | 308 |
| MS.gene73533.t1 | MTR_1g011410 | 49.051 | 316 | 110 | 3 | 14 | 300 | 3 | 296 | 6.82e-84 | 268 |
| MS.gene73533.t1 | MTR_1g016310 | 46.407 | 334 | 135 | 5 | 1 | 291 | 3 | 335 | 1.15e-97 | 294 |
| MS.gene73533.t1 | MTR_1g016310 | 45.322 | 342 | 143 | 5 | 1 | 299 | 3 | 343 | 6.16e-96 | 293 |
| MS.gene73533.t1 | MTR_1g013280 | 43.750 | 368 | 134 | 7 | 65 | 387 | 5 | 344 | 4.13e-85 | 263 |
| MS.gene73533.t1 | MTR_1g013610 | 46.687 | 332 | 118 | 5 | 12 | 302 | 1 | 314 | 2.14e-84 | 262 |
| MS.gene73533.t1 | MTR_0049s0110 | 36.538 | 416 | 213 | 11 | 17 | 385 | 7 | 418 | 1.06e-70 | 228 |
| MS.gene73533.t1 | MTR_1g028860 | 48.800 | 250 | 114 | 5 | 30 | 270 | 2 | 246 | 9.30e-70 | 221 |
| MS.gene73533.t1 | MTR_2g047852 | 49.339 | 227 | 83 | 3 | 16 | 238 | 7 | 205 | 1.22e-63 | 202 |
| MS.gene73533.t1 | MTR_1g013630 | 56.931 | 202 | 77 | 3 | 14 | 207 | 35 | 234 | 1.79e-63 | 208 |
| MS.gene73533.t1 | MTR_0049s0110 | 37.500 | 320 | 162 | 8 | 17 | 302 | 7 | 322 | 2.39e-55 | 186 |
| MS.gene73533.t1 | MTR_0049s0110 | 37.500 | 320 | 162 | 8 | 17 | 302 | 7 | 322 | 2.62e-55 | 185 |
| MS.gene73533.t1 | MTR_0049s0110 | 38.889 | 270 | 148 | 6 | 17 | 273 | 7 | 272 | 7.38e-53 | 177 |
| MS.gene73533.t1 | MTR_1g013620 | 49.275 | 207 | 92 | 4 | 190 | 383 | 1 | 207 | 2.05e-49 | 166 |
| MS.gene73533.t1 | MTR_5g038430 | 28.780 | 410 | 246 | 10 | 18 | 388 | 96 | 498 | 2.06e-33 | 130 |
| MS.gene73533.t1 | MTR_7g090750 | 29.245 | 424 | 246 | 14 | 12 | 385 | 3 | 422 | 1.33e-29 | 119 |
| MS.gene73533.t1 | MTR_0227s0010 | 33.740 | 246 | 130 | 6 | 18 | 256 | 15 | 234 | 8.87e-26 | 106 |
| MS.gene73533.t1 | MTR_8g095590 | 26.761 | 355 | 193 | 12 | 18 | 336 | 15 | 338 | 5.42e-22 | 97.8 |
| MS.gene73533.t1 | MTR_1g010190 | 60.000 | 65 | 26 | 0 | 252 | 316 | 16 | 80 | 2.49e-20 | 85.5 |
| MS.gene73533.t1 | MTR_3g036250 | 26.486 | 370 | 213 | 11 | 15 | 358 | 2 | 338 | 6.83e-18 | 84.7 |
| MS.gene73533.t1 | MTR_6g013240 | 29.075 | 227 | 132 | 6 | 21 | 223 | 75 | 296 | 2.98e-17 | 84.0 |
| MS.gene73533.t1 | MTR_6g013380 | 29.075 | 227 | 132 | 6 | 21 | 223 | 70 | 291 | 3.52e-17 | 83.6 |
| MS.gene73533.t1 | MTR_2g100590 | 25.397 | 378 | 237 | 14 | 15 | 364 | 39 | 399 | 1.10e-16 | 81.6 |
| MS.gene73533.t1 | MTR_2g100590 | 25.397 | 378 | 237 | 14 | 15 | 364 | 39 | 399 | 1.13e-16 | 81.6 |
| MS.gene73533.t1 | MTR_2g100590 | 25.397 | 378 | 237 | 14 | 15 | 364 | 39 | 399 | 2.23e-16 | 81.3 |
| MS.gene73533.t1 | MTR_1g115245 | 31.739 | 230 | 132 | 9 | 2 | 224 | 16 | 227 | 2.62e-16 | 79.3 |
| MS.gene73533.t1 | MTR_7g056433 | 25.971 | 412 | 249 | 15 | 7 | 386 | 2 | 389 | 1.13e-15 | 78.2 |
| MS.gene73533.t1 | MTR_8g015830 | 31.797 | 217 | 114 | 7 | 14 | 202 | 4 | 214 | 1.23e-15 | 78.6 |
| MS.gene73533.t1 | MTR_7g056447 | 36.410 | 195 | 114 | 6 | 13 | 204 | 4 | 191 | 1.24e-15 | 77.0 |
| MS.gene73533.t1 | MTR_8g015830 | 31.797 | 217 | 114 | 7 | 14 | 202 | 4 | 214 | 1.29e-15 | 79.0 |
| MS.gene73533.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 3.00e-15 | 77.4 |
| MS.gene73533.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 21 | 241 | 3.11e-15 | 77.4 |
| MS.gene73533.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 3.25e-15 | 77.4 |
| MS.gene73533.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 5.23e-15 | 77.0 |
| MS.gene73533.t1 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 21 | 241 | 6.05e-15 | 76.6 |
| MS.gene73533.t1 | MTR_1g115250 | 38.514 | 148 | 79 | 6 | 13 | 155 | 27 | 167 | 1.20e-14 | 75.5 |
| MS.gene73533.t1 | MTR_7g105510 | 29.204 | 226 | 135 | 6 | 21 | 223 | 35 | 258 | 2.22e-14 | 73.9 |
| MS.gene73533.t1 | MTR_8g014160 | 23.797 | 374 | 242 | 11 | 12 | 357 | 35 | 393 | 3.33e-14 | 73.9 |
| MS.gene73533.t1 | MTR_7g115270 | 25.806 | 403 | 237 | 16 | 18 | 378 | 12 | 394 | 4.72e-14 | 73.6 |
| MS.gene73533.t1 | MTR_2g082850 | 31.492 | 181 | 113 | 4 | 12 | 185 | 16 | 192 | 5.70e-14 | 73.2 |
| MS.gene73533.t1 | MTR_7g098510 | 24.552 | 391 | 256 | 12 | 18 | 386 | 18 | 391 | 7.95e-14 | 72.8 |
| MS.gene73533.t1 | MTR_7g032380 | 24.297 | 391 | 229 | 15 | 18 | 386 | 11 | 356 | 9.48e-14 | 72.4 |
| MS.gene73533.t1 | MTR_8g015680 | 30.233 | 215 | 117 | 6 | 12 | 202 | 1 | 206 | 1.23e-13 | 72.8 |
| MS.gene73533.t1 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 1.41e-13 | 72.4 |
| MS.gene73533.t1 | MTR_8g017280 | 29.143 | 175 | 117 | 3 | 11 | 182 | 29 | 199 | 1.49e-13 | 71.2 |
| MS.gene73533.t1 | MTR_8g017280 | 29.143 | 175 | 117 | 3 | 11 | 182 | 29 | 199 | 1.97e-13 | 71.6 |
| MS.gene73533.t1 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 3.29e-13 | 71.2 |
| MS.gene73533.t1 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 3.63e-13 | 71.2 |
| MS.gene73533.t1 | MTR_8g467800 | 24.176 | 455 | 254 | 16 | 2 | 378 | 4 | 445 | 1.49e-12 | 69.3 |
| MS.gene73533.t1 | MTR_7g025080 | 46.053 | 76 | 40 | 1 | 14 | 88 | 2 | 77 | 4.38e-12 | 67.0 |
| MS.gene73533.t1 | MTR_8g014260 | 29.225 | 284 | 143 | 13 | 15 | 249 | 13 | 287 | 6.14e-12 | 67.4 |
| MS.gene73533.t1 | MTR_2g082800 | 32.948 | 173 | 107 | 7 | 13 | 183 | 22 | 187 | 8.66e-12 | 66.6 |
| MS.gene73533.t1 | MTR_8g015770 | 28.070 | 228 | 119 | 8 | 14 | 202 | 2 | 223 | 1.20e-11 | 66.6 |
| MS.gene73533.t1 | MTR_3g082890 | 27.110 | 391 | 229 | 14 | 4 | 357 | 83 | 454 | 1.24e-11 | 66.2 |
| MS.gene73533.t1 | MTR_7g034115 | 23.929 | 397 | 236 | 14 | 18 | 379 | 11 | 376 | 1.52e-11 | 65.9 |
| MS.gene73533.t1 | MTR_8g467800 | 39.604 | 101 | 55 | 3 | 2 | 101 | 4 | 99 | 1.70e-11 | 65.5 |
| MS.gene73533.t1 | MTR_4g056030 | 27.251 | 422 | 216 | 19 | 13 | 357 | 4 | 411 | 1.93e-11 | 65.9 |
| MS.gene73533.t1 | MTR_1g013600 | 50.847 | 59 | 28 | 1 | 322 | 380 | 3 | 60 | 1.97e-11 | 59.3 |
| MS.gene73533.t1 | MTR_5g087940 | 35.461 | 141 | 80 | 3 | 15 | 155 | 23 | 152 | 2.05e-11 | 65.5 |
| MS.gene73533.t1 | MTR_5g021550 | 32.192 | 146 | 89 | 4 | 14 | 150 | 15 | 159 | 2.26e-11 | 62.4 |
| MS.gene73533.t1 | MTR_7g088260 | 25.971 | 412 | 243 | 19 | 6 | 384 | 79 | 461 | 2.45e-11 | 65.5 |
| MS.gene73533.t1 | MTR_7g095560 | 28.194 | 227 | 133 | 7 | 23 | 223 | 16 | 238 | 3.07e-11 | 65.5 |
| MS.gene73533.t1 | MTR_5g039950 | 28.216 | 241 | 148 | 6 | 18 | 255 | 23 | 241 | 7.48e-11 | 63.9 |
| MS.gene73533.t1 | MTR_7g087040 | 29.911 | 224 | 132 | 6 | 23 | 223 | 11 | 232 | 9.99e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73533.t1 | AT1G13570 | 39.474 | 418 | 200 | 12 | 15 | 385 | 3 | 414 | 4.52e-77 | 244 |
| MS.gene73533.t1 | AT1G13570 | 39.474 | 418 | 200 | 12 | 15 | 385 | 3 | 414 | 4.52e-77 | 244 |
| MS.gene73533.t1 | AT1G13570 | 46.552 | 232 | 118 | 4 | 15 | 245 | 3 | 229 | 4.46e-60 | 196 |
| MS.gene73533.t1 | AT5G56440 | 29.787 | 282 | 171 | 11 | 18 | 286 | 2 | 269 | 4.93e-19 | 88.6 |
| MS.gene73533.t1 | AT1G66310 | 28.348 | 448 | 227 | 22 | 13 | 385 | 14 | 442 | 9.12e-19 | 87.8 |
| MS.gene73533.t1 | AT1G66300 | 26.407 | 462 | 246 | 17 | 3 | 385 | 10 | 456 | 3.16e-17 | 83.6 |
| MS.gene73533.t1 | AT1G32375 | 23.419 | 427 | 260 | 14 | 18 | 384 | 2 | 421 | 4.48e-17 | 82.8 |
| MS.gene73533.t1 | AT1G32375 | 23.419 | 427 | 260 | 14 | 18 | 384 | 2 | 421 | 4.48e-17 | 82.8 |
| MS.gene73533.t1 | AT5G22720 | 29.057 | 265 | 167 | 9 | 1 | 252 | 6 | 262 | 1.33e-16 | 81.6 |
| MS.gene73533.t1 | AT3G52680 | 30.986 | 213 | 133 | 5 | 18 | 223 | 21 | 226 | 2.03e-16 | 80.9 |
| MS.gene73533.t1 | AT3G52680 | 30.986 | 213 | 133 | 5 | 18 | 223 | 21 | 226 | 2.15e-16 | 80.5 |
| MS.gene73533.t1 | AT3G58860 | 29.658 | 263 | 149 | 9 | 15 | 245 | 4 | 262 | 2.39e-16 | 80.9 |
| MS.gene73533.t1 | AT3G59200 | 34.928 | 209 | 107 | 10 | 18 | 210 | 7 | 202 | 6.05e-16 | 79.0 |
| MS.gene73533.t1 | AT3G59200 | 34.928 | 209 | 107 | 10 | 18 | 210 | 7 | 202 | 1.02e-15 | 79.0 |
| MS.gene73533.t1 | AT3G58960 | 30.000 | 230 | 137 | 7 | 18 | 235 | 2 | 219 | 1.21e-15 | 78.6 |
| MS.gene73533.t1 | AT4G00160 | 31.414 | 191 | 120 | 5 | 18 | 203 | 16 | 200 | 1.25e-15 | 78.6 |
| MS.gene73533.t1 | AT4G10400 | 31.132 | 212 | 134 | 5 | 18 | 223 | 2 | 207 | 1.66e-15 | 78.2 |
| MS.gene73533.t1 | AT4G10400 | 31.132 | 212 | 134 | 5 | 18 | 223 | 2 | 207 | 1.66e-15 | 78.2 |
| MS.gene73533.t1 | AT4G10400 | 31.132 | 212 | 134 | 5 | 18 | 223 | 2 | 207 | 1.66e-15 | 78.2 |
| MS.gene73533.t1 | AT5G22730 | 27.855 | 359 | 209 | 15 | 2 | 348 | 13 | 333 | 4.28e-15 | 76.6 |
| MS.gene73533.t1 | AT5G22730 | 31.128 | 257 | 150 | 10 | 2 | 244 | 13 | 256 | 4.53e-15 | 77.0 |
| MS.gene73533.t1 | AT5G22730 | 31.128 | 257 | 150 | 10 | 2 | 244 | 13 | 256 | 4.53e-15 | 77.0 |
| MS.gene73533.t1 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 8.09e-15 | 75.9 |
| MS.gene73533.t1 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 8.09e-15 | 75.9 |
| MS.gene73533.t1 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 8.09e-15 | 75.9 |
| MS.gene73533.t1 | AT5G53840 | 26.303 | 403 | 226 | 15 | 16 | 358 | 16 | 407 | 1.27e-14 | 75.5 |
| MS.gene73533.t1 | AT5G56370 | 25.879 | 398 | 224 | 14 | 18 | 360 | 2 | 383 | 1.36e-14 | 75.5 |
| MS.gene73533.t1 | AT5G56370 | 25.879 | 398 | 224 | 14 | 18 | 360 | 2 | 383 | 1.36e-14 | 75.5 |
| MS.gene73533.t1 | AT3G58980 | 30.515 | 272 | 133 | 11 | 18 | 246 | 2 | 260 | 1.82e-14 | 75.5 |
| MS.gene73533.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.84e-14 | 73.6 |
| MS.gene73533.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.84e-14 | 73.6 |
| MS.gene73533.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.84e-14 | 73.6 |
| MS.gene73533.t1 | AT3G26922 | 30.909 | 220 | 134 | 8 | 18 | 227 | 14 | 225 | 2.01e-14 | 73.9 |
| MS.gene73533.t1 | AT3G26922 | 30.909 | 220 | 134 | 8 | 18 | 227 | 14 | 225 | 2.01e-14 | 73.9 |
| MS.gene73533.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 3.10e-14 | 73.6 |
| MS.gene73533.t1 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 3.10e-14 | 73.6 |
| MS.gene73533.t1 | AT4G14103 | 33.503 | 197 | 121 | 7 | 18 | 208 | 8 | 200 | 4.45e-14 | 73.6 |
| MS.gene73533.t1 | AT4G14103 | 33.503 | 197 | 121 | 7 | 18 | 208 | 8 | 200 | 4.45e-14 | 73.6 |
| MS.gene73533.t1 | AT4G14103 | 33.503 | 197 | 121 | 7 | 18 | 208 | 8 | 200 | 4.47e-14 | 73.9 |
| MS.gene73533.t1 | AT3G59230 | 33.000 | 200 | 119 | 6 | 18 | 204 | 12 | 209 | 4.75e-14 | 73.9 |
| MS.gene73533.t1 | AT4G13960 | 33.796 | 216 | 128 | 8 | 18 | 224 | 2 | 211 | 6.51e-14 | 73.6 |
| MS.gene73533.t1 | AT4G13960 | 33.796 | 216 | 128 | 8 | 18 | 224 | 2 | 211 | 6.51e-14 | 73.6 |
| MS.gene73533.t1 | AT5G44950 | 24.719 | 445 | 237 | 18 | 18 | 380 | 4 | 432 | 1.18e-13 | 72.4 |
| MS.gene73533.t1 | AT3G59000 | 32.759 | 232 | 141 | 8 | 18 | 236 | 2 | 231 | 1.23e-13 | 72.8 |
| MS.gene73533.t1 | AT4G00315 | 25.779 | 353 | 184 | 11 | 18 | 302 | 2 | 344 | 1.46e-13 | 72.4 |
| MS.gene73533.t1 | AT3G58880 | 30.078 | 256 | 159 | 10 | 18 | 259 | 3 | 252 | 1.47e-13 | 72.4 |
| MS.gene73533.t1 | AT3G59190 | 27.826 | 230 | 153 | 7 | 18 | 236 | 12 | 239 | 1.57e-13 | 72.0 |
| MS.gene73533.t1 | AT4G14096 | 31.818 | 220 | 136 | 8 | 18 | 229 | 8 | 221 | 1.94e-13 | 72.0 |
| MS.gene73533.t1 | AT4G14096 | 31.818 | 220 | 136 | 8 | 18 | 229 | 8 | 221 | 1.94e-13 | 72.0 |
| MS.gene73533.t1 | AT5G41840 | 28.175 | 252 | 149 | 7 | 6 | 227 | 2 | 251 | 2.05e-13 | 72.0 |
| MS.gene73533.t1 | AT3G59000 | 43.137 | 102 | 53 | 3 | 18 | 114 | 2 | 103 | 2.87e-13 | 70.9 |
| MS.gene73533.t1 | AT3G59190 | 28.139 | 231 | 151 | 8 | 18 | 236 | 12 | 239 | 3.20e-13 | 71.2 |
| MS.gene73533.t1 | AT5G56370 | 25.846 | 325 | 188 | 11 | 18 | 300 | 2 | 315 | 3.90e-13 | 70.1 |
| MS.gene73533.t1 | AT5G22610 | 27.193 | 228 | 136 | 7 | 18 | 226 | 18 | 234 | 4.00e-13 | 70.9 |
| MS.gene73533.t1 | AT1G51370 | 24.586 | 362 | 230 | 10 | 12 | 362 | 14 | 343 | 4.59e-13 | 70.9 |
| MS.gene73533.t1 | AT1G51370 | 24.586 | 362 | 230 | 10 | 12 | 362 | 14 | 343 | 4.76e-13 | 70.5 |
| MS.gene73533.t1 | AT1G69630 | 24.545 | 440 | 249 | 13 | 15 | 380 | 15 | 445 | 4.89e-13 | 70.9 |
| MS.gene73533.t1 | AT2G04230 | 30.088 | 226 | 149 | 7 | 18 | 236 | 13 | 236 | 5.21e-13 | 70.5 |
| MS.gene73533.t1 | AT3G28410 | 27.727 | 220 | 137 | 8 | 15 | 228 | 25 | 228 | 5.39e-13 | 70.5 |
| MS.gene73533.t1 | AT1G51370 | 24.789 | 355 | 224 | 10 | 12 | 355 | 14 | 336 | 5.50e-13 | 70.1 |
| MS.gene73533.t1 | AT4G15060 | 26.385 | 379 | 207 | 14 | 2 | 336 | 156 | 506 | 6.70e-13 | 70.5 |
| MS.gene73533.t1 | AT1G55030 | 28.446 | 341 | 166 | 17 | 18 | 301 | 19 | 338 | 9.37e-13 | 69.7 |
| MS.gene73533.t1 | AT3G49150 | 32.536 | 209 | 110 | 9 | 18 | 208 | 16 | 211 | 9.54e-13 | 69.7 |
| MS.gene73533.t1 | AT1G55030 | 28.152 | 341 | 167 | 17 | 18 | 301 | 9 | 328 | 1.02e-12 | 69.7 |
| MS.gene73533.t1 | AT3G51530 | 30.736 | 231 | 137 | 10 | 5 | 227 | 19 | 234 | 1.71e-12 | 68.9 |
| MS.gene73533.t1 | AT4G15060 | 25.310 | 403 | 216 | 15 | 1 | 336 | 9 | 393 | 1.76e-12 | 68.9 |
| MS.gene73533.t1 | AT5G56410 | 26.807 | 332 | 181 | 10 | 31 | 300 | 16 | 347 | 3.32e-12 | 68.2 |
| MS.gene73533.t1 | AT5G02700 | 26.364 | 220 | 140 | 7 | 15 | 228 | 24 | 227 | 3.42e-12 | 68.2 |
| MS.gene73533.t1 | AT1G78760 | 26.667 | 285 | 152 | 12 | 16 | 263 | 14 | 278 | 4.48e-12 | 67.8 |
| MS.gene73533.t1 | AT4G00320 | 27.273 | 220 | 128 | 6 | 7 | 204 | 3 | 212 | 4.91e-12 | 67.8 |
| MS.gene73533.t1 | AT3G59240 | 31.963 | 219 | 129 | 10 | 18 | 223 | 8 | 219 | 7.71e-12 | 67.0 |
| MS.gene73533.t1 | AT4G13965 | 24.925 | 333 | 187 | 10 | 18 | 301 | 10 | 328 | 1.27e-11 | 66.2 |
| MS.gene73533.t1 | AT1G58310 | 30.093 | 216 | 108 | 9 | 18 | 202 | 8 | 211 | 1.33e-11 | 66.2 |
| MS.gene73533.t1 | AT5G22610 | 26.818 | 220 | 136 | 7 | 18 | 223 | 18 | 226 | 1.34e-11 | 66.2 |
| MS.gene73533.t1 | AT4G22280 | 29.688 | 192 | 121 | 7 | 18 | 204 | 2 | 184 | 1.74e-11 | 65.9 |
| MS.gene73533.t1 | AT5G50270 | 23.866 | 419 | 243 | 17 | 18 | 372 | 2 | 408 | 1.95e-11 | 65.5 |
| MS.gene73533.t1 | AT5G41830 | 27.602 | 221 | 126 | 7 | 7 | 204 | 3 | 212 | 2.55e-11 | 65.5 |
| MS.gene73533.t1 | AT1G55660 | 26.197 | 355 | 180 | 12 | 18 | 302 | 53 | 395 | 3.30e-11 | 65.1 |
| MS.gene73533.t1 | AT5G54820 | 26.255 | 259 | 158 | 9 | 16 | 245 | 5 | 259 | 3.33e-11 | 65.1 |
| MS.gene73533.t1 | AT5G25850 | 31.016 | 187 | 117 | 6 | 18 | 202 | 20 | 196 | 3.41e-11 | 65.1 |
| MS.gene73533.t1 | AT1G16930 | 27.612 | 268 | 155 | 10 | 18 | 279 | 15 | 249 | 3.50e-11 | 65.1 |
| MS.gene73533.t1 | AT1G16930 | 27.612 | 268 | 155 | 10 | 18 | 279 | 15 | 249 | 3.50e-11 | 65.1 |
| MS.gene73533.t1 | AT1G16930 | 27.612 | 268 | 155 | 10 | 18 | 279 | 15 | 249 | 3.50e-11 | 65.1 |
| MS.gene73533.t1 | AT4G22280 | 29.167 | 192 | 122 | 6 | 18 | 204 | 2 | 184 | 3.79e-11 | 64.3 |
| MS.gene73533.t1 | AT3G58940 | 24.757 | 412 | 237 | 15 | 18 | 362 | 2 | 407 | 4.30e-11 | 65.1 |
| MS.gene73533.t1 | AT3G58940 | 24.757 | 412 | 237 | 15 | 18 | 362 | 2 | 407 | 4.30e-11 | 65.1 |
| MS.gene73533.t1 | AT4G13985 | 26.510 | 298 | 173 | 10 | 4 | 262 | 5 | 295 | 8.59e-11 | 63.9 |
| MS.gene73533.t1 | AT5G56560 | 28.326 | 233 | 137 | 12 | 15 | 238 | 2 | 213 | 9.31e-11 | 63.9 |
Find 64 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTGGCTGCTTCCTTAAT+TGG | 0.205674 | 4.1:+59567136 | None:intergenic |
| GTTGACAAACCATGCCTATT+TGG | 0.234739 | 4.1:-59565752 | MS.gene73533:CDS |
| ATCATTAAAGTTTATGCATA+TGG | 0.276553 | 4.1:+59566175 | None:intergenic |
| AAGAGTTTGTGTTAGAAATC+TGG | 0.283438 | 4.1:-59566871 | MS.gene73533:CDS |
| CATGTACTTATTCTCCATTC+TGG | 0.283492 | 4.1:-59566983 | MS.gene73533:CDS |
| CTCACCTAATCTACGAGAAT+TGG | 0.327148 | 4.1:-59566114 | MS.gene73533:CDS |
| GGTAGATAAAATACTTGTTC+TGG | 0.331898 | 4.1:+59567120 | None:intergenic |
| TCATTATCAAACACAAGATT+TGG | 0.334429 | 4.1:+59567070 | None:intergenic |
| TAAAAGGTCATTAGAAGTTT+CGG | 0.342074 | 4.1:+59567039 | None:intergenic |
| CATGACTGGCCGATCCAAAT+AGG | 0.352972 | 4.1:+59565738 | None:intergenic |
| ATTTCCAATTCTCGTAGATT+AGG | 0.367571 | 4.1:+59566110 | None:intergenic |
| ATACCACCATCAACATTTCA+AGG | 0.369396 | 4.1:-59566761 | MS.gene73533:CDS |
| GCTTGCTCTTGATAACTAAA+AGG | 0.372194 | 4.1:+59567023 | None:intergenic |
| CGTCTGATACGCAAGGAGAC+TGG | 0.376356 | 4.1:+59567221 | None:intergenic |
| GCATGGTTTGTCAACGGAAC+AGG | 0.398730 | 4.1:+59565760 | None:intergenic |
| AACGCTATAAAATACCTTCA+TGG | 0.398891 | 4.1:-59566835 | MS.gene73533:CDS |
| GAACATTGATGGAGAATTTG+AGG | 0.403009 | 4.1:-59566579 | MS.gene73533:CDS |
| CTACCAACTGGAGGTACAAA+TGG | 0.415469 | 4.1:-59567102 | MS.gene73533:CDS |
| TTGAAGCCTTGAAATGTTGA+TGG | 0.419068 | 4.1:+59566755 | None:intergenic |
| AAAATCATTACTTACGGTCT+AGG | 0.429313 | 4.1:+59565530 | None:intergenic |
| ACATACTTCACTTGCATGAC+TGG | 0.429422 | 4.1:+59565724 | None:intergenic |
| GTGAGAATAGGTGGCATCTC+TGG | 0.446886 | 4.1:-59565703 | MS.gene73533:CDS |
| ATTTAGAATTATTAGAATGC+TGG | 0.466467 | 4.1:-59566787 | MS.gene73533:CDS |
| GTCTGATACGCAAGGAGACT+GGG | 0.470015 | 4.1:+59567222 | None:intergenic |
| ATGTCAATCGTTCAAGCAAA+AGG | 0.471429 | 4.1:+59566660 | None:intergenic |
| TCGTTCAAGCAAAAGGCAGC+TGG | 0.482008 | 4.1:+59566667 | None:intergenic |
| CACGGGGTAGGAAGCTCTAA+TGG | 0.482328 | 4.1:+59566218 | None:intergenic |
| CATAAACTTTAATGATTCAA+AGG | 0.483498 | 4.1:-59566168 | MS.gene73533:CDS |
| TGGTAAACTACTAACTCTAT+CGG | 0.486556 | 4.1:+59567192 | None:intergenic |
| TGAAAGAACTATTGCGGATG+AGG | 0.488648 | 4.1:-59565579 | MS.gene73533:CDS |
| AAACTCTTTAACCTGCCATC+TGG | 0.488698 | 4.1:+59566886 | None:intergenic |
| TAATCTACGAGAATTGGAAA+TGG | 0.514737 | 4.1:-59566108 | MS.gene73533:CDS |
| CAAGTGAAGTATGTGAGAAT+AGG | 0.521251 | 4.1:-59565715 | MS.gene73533:CDS |
| GGTAAACTACTAACTCTATC+GGG | 0.539598 | 4.1:+59567193 | None:intergenic |
| TCCGGTCCGACGTTTAAAGC+AGG | 0.543713 | 4.1:+59565607 | None:intergenic |
| GTAAATAACTTCAGCTCGTG+AGG | 0.552911 | 4.1:+59565552 | None:intergenic |
| GGTCCATTTGTACCTCCAGT+TGG | 0.554074 | 4.1:+59567099 | None:intergenic |
| TCTTTATCTAACCAGATGGC+AGG | 0.558711 | 4.1:-59566897 | MS.gene73533:CDS |
| AATAGTTCTTTCATCAACTC+CGG | 0.570479 | 4.1:+59565589 | None:intergenic |
| ACCTGCTTTAAACGTCGGAC+CGG | 0.576995 | 4.1:-59565608 | MS.gene73533:CDS |
| TTGACATTGATCAACTTCGA+TGG | 0.578034 | 4.1:-59566644 | MS.gene73533:CDS |
| GTGAAGTATGTGAGAATAGG+TGG | 0.582575 | 4.1:-59565712 | MS.gene73533:CDS |
| CAAACCATGCCTATTTGGAT+CGG | 0.584800 | 4.1:-59565747 | MS.gene73533:CDS |
| TGACAAGAAAATAACCATGA+AGG | 0.587372 | 4.1:+59566821 | None:intergenic |
| TCTACGAGAATTGGAAATGG+TGG | 0.588559 | 4.1:-59566105 | MS.gene73533:intron |
| GATAGAGTTAGTAGTTTACC+AGG | 0.591174 | 4.1:-59567190 | MS.gene73533:CDS |
| AAGCTGATGAAGTCTAACTC+AGG | 0.595650 | 4.1:+59565673 | None:intergenic |
| GAGAACTTCGAAAGCAAACA+AGG | 0.598820 | 4.1:-59566503 | MS.gene73533:intron |
| CTTAGATCAACGCACGGGGT+AGG | 0.603539 | 4.1:+59566206 | None:intergenic |
| ATGTGGTTTATTATAAGACC+TGG | 0.606081 | 4.1:+59567172 | None:intergenic |
| TATAACTTAGATCAACGCAC+GGG | 0.607237 | 4.1:+59566201 | None:intergenic |
| GGCTCCTCGTCTGATACGCA+AGG | 0.617251 | 4.1:+59567214 | None:intergenic |
| GTCTCCTTGCGTATCAGACG+AGG | 0.618721 | 4.1:-59567218 | MS.gene73533:CDS |
| GTGAAACCTGCTTTAAACGT+CGG | 0.629864 | 4.1:-59565613 | MS.gene73533:CDS |
| AAACACAAGATTTGGAAGTG+TGG | 0.633110 | 4.1:+59567078 | None:intergenic |
| AAATAGGCATGGTTTGTCAA+CGG | 0.636771 | 4.1:+59565754 | None:intergenic |
| CTGGCCGATCCAAATAGGCA+TGG | 0.648014 | 4.1:+59565743 | None:intergenic |
| ATGTCACTGATATTGATCGA+TGG | 0.655748 | 4.1:-59566922 | MS.gene73533:CDS |
| TTGTATGTAGGTACGATCTG+AGG | 0.659027 | 4.1:-59565788 | MS.gene73533:intron |
| GGACTCTTTATCTAACCAGA+TGG | 0.661378 | 4.1:-59566901 | MS.gene73533:CDS |
| AGTTGATGAAAGAACTATTG+CGG | 0.662211 | 4.1:-59565585 | MS.gene73533:CDS |
| ATATAACTTAGATCAACGCA+CGG | 0.662554 | 4.1:+59566200 | None:intergenic |
| AAGCCTTGAAATGTTGATGG+TGG | 0.685200 | 4.1:+59566758 | None:intergenic |
| ATAACTTAGATCAACGCACG+GGG | 0.741044 | 4.1:+59566202 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATAATATAATTGTGT+TGG | - | chr4.1:59566825-59566844 | MS.gene73533:CDS | 15.0% |
| !! | ATCATTAAAGTTTATGCATA+TGG | + | chr4.1:59566606-59566625 | None:intergenic | 20.0% |
| !! | CATAAACTTTAATGATTCAA+AGG | - | chr4.1:59566610-59566629 | MS.gene73533:CDS | 20.0% |
| !! | TAAATAACAAAAACAGTATG+TGG | + | chr4.1:59566729-59566748 | None:intergenic | 20.0% |
| !!! | ATTATTGATTGAAATTCAAG+TGG | + | chr4.1:59566815-59566834 | None:intergenic | 20.0% |
| !!! | ATTTAGAATTATTAGAATGC+TGG | - | chr4.1:59565991-59566010 | MS.gene73533:intron | 20.0% |
| !!! | GATTAACAACTATTTTTTGA+AGG | - | chr4.1:59566367-59566386 | MS.gene73533:intron | 20.0% |
| !!! | TTATTGATTGAAATTCAAGT+GGG | + | chr4.1:59566814-59566833 | None:intergenic | 20.0% |
| ! | AAAAATAGTTGTTAATCTCC+AGG | + | chr4.1:59566364-59566383 | None:intergenic | 25.0% |
| ! | AAGTTTCATACATATGATTG+TGG | + | chr4.1:59566444-59566463 | None:intergenic | 25.0% |
| ! | AGTATTTGTCTAGTAAGTTA+TGG | - | chr4.1:59566926-59566945 | MS.gene73533:CDS | 25.0% |
| ! | ATGTTCAAAAATTGGAGATT+TGG | + | chr4.1:59566185-59566204 | None:intergenic | 25.0% |
| ! | TAAAAGGTCATTAGAAGTTT+CGG | + | chr4.1:59565742-59565761 | None:intergenic | 25.0% |
| ! | TCATTATCAAACACAAGATT+TGG | + | chr4.1:59565711-59565730 | None:intergenic | 25.0% |
| !! | TGGTGCATTTTAAATTTGTA+GGG | + | chr4.1:59566424-59566443 | None:intergenic | 25.0% |
| AACGCTATAAAATACCTTCA+TGG | - | chr4.1:59565943-59565962 | MS.gene73533:intron | 30.0% | |
| AAGAGTTTGTGTTAGAAATC+TGG | - | chr4.1:59565907-59565926 | MS.gene73533:intron | 30.0% | |
| AATAGTTCTTTCATCAACTC+CGG | + | chr4.1:59567192-59567211 | None:intergenic | 30.0% | |
| ATATAACTTAGATCAACGCA+CGG | + | chr4.1:59566581-59566600 | None:intergenic | 30.0% | |
| ATGTGGTTTATTATAAGACC+TGG | + | chr4.1:59565609-59565628 | None:intergenic | 30.0% | |
| ATTTCCAATTCTCGTAGATT+AGG | + | chr4.1:59566671-59566690 | None:intergenic | 30.0% | |
| CTCCATCAATGTTCAAAAAT+TGG | + | chr4.1:59566193-59566212 | None:intergenic | 30.0% | |
| GGTAGATAAAATACTTGTTC+TGG | + | chr4.1:59565661-59565680 | None:intergenic | 30.0% | |
| TAATCTACGAGAATTGGAAA+TGG | - | chr4.1:59566670-59566689 | MS.gene73533:CDS | 30.0% | |
| TGACAAGAAAATAACCATGA+AGG | + | chr4.1:59565960-59565979 | None:intergenic | 30.0% | |
| TGGTAAACTACTAACTCTAT+CGG | + | chr4.1:59565589-59565608 | None:intergenic | 30.0% | |
| ! | ACTCATATAAGCTTGATTTG+TGG | - | chr4.1:59566701-59566720 | MS.gene73533:CDS | 30.0% |
| ! | CAAGTATTTTATCTACCAAC+TGG | - | chr4.1:59565664-59565683 | MS.gene73533:CDS | 30.0% |
| ! | CTCCAATTTTTGAACATTGA+TGG | - | chr4.1:59566188-59566207 | MS.gene73533:CDS | 30.0% |
| ! | GTATTAGAGATTGTGTTGTT+TGG | - | chr4.1:59566855-59566874 | MS.gene73533:CDS | 30.0% |
| ! | GTGGTGCATTTTAAATTTGT+AGG | + | chr4.1:59566425-59566444 | None:intergenic | 30.0% |
| !! | AGTTGATGAAAGAACTATTG+CGG | - | chr4.1:59567193-59567212 | MS.gene73533:CDS | 30.0% |
| !! | TCTCTCATTTTTGCCAATTA+AGG | - | chr4.1:59565629-59565648 | MS.gene73533:CDS | 30.0% |
| !!! | ATGAAGGTATTTTATAGCGT+TGG | + | chr4.1:59565944-59565963 | None:intergenic | 30.0% |
| AAACACAAGATTTGGAAGTG+TGG | + | chr4.1:59565703-59565722 | None:intergenic | 35.0% | |
| ATACCACCATCAACATTTCA+AGG | - | chr4.1:59566017-59566036 | MS.gene73533:intron | 35.0% | |
| ATGTCAATCGTTCAAGCAAA+AGG | + | chr4.1:59566121-59566140 | None:intergenic | 35.0% | |
| ATGTCACTGATATTGATCGA+TGG | - | chr4.1:59565856-59565875 | MS.gene73533:intron | 35.0% | |
| CAAGTGAAGTATGTGAGAAT+AGG | - | chr4.1:59567063-59567082 | MS.gene73533:CDS | 35.0% | |
| CATGTACTTATTCTCCATTC+TGG | - | chr4.1:59565795-59565814 | MS.gene73533:intron | 35.0% | |
| GAAACAAGACAGAAAGTGAA+TGG | + | chr4.1:59566511-59566530 | None:intergenic | 35.0% | |
| GAACATTGATGGAGAATTTG+AGG | - | chr4.1:59566199-59566218 | MS.gene73533:CDS | 35.0% | |
| GATAGAGTTAGTAGTTTACC+AGG | - | chr4.1:59565588-59565607 | MS.gene73533:CDS | 35.0% | |
| GGTAAACTACTAACTCTATC+GGG | + | chr4.1:59565588-59565607 | None:intergenic | 35.0% | |
| TATAACTTAGATCAACGCAC+GGG | + | chr4.1:59566580-59566599 | None:intergenic | 35.0% | |
| TCAAAAAGTTCAAGCTCTCT+CGG | - | chr4.1:59565823-59565842 | MS.gene73533:intron | 35.0% | |
| TGTGTGTTACGATTGTATGT+AGG | - | chr4.1:59566978-59566997 | MS.gene73533:CDS | 35.0% | |
| TTGAAGCCTTGAAATGTTGA+TGG | + | chr4.1:59566026-59566045 | None:intergenic | 35.0% | |
| TTGACATTGATCAACTTCGA+TGG | - | chr4.1:59566134-59566153 | MS.gene73533:CDS | 35.0% | |
| TTGGCAAAAATGAGAGAATG+TGG | + | chr4.1:59565626-59565645 | None:intergenic | 35.0% | |
| ! | AAATAGGCATGGTTTGTCAA+CGG | + | chr4.1:59567027-59567046 | None:intergenic | 35.0% |
| ! | AGGCACTTTGAAAAGAAAAC+TGG | + | chr4.1:59566788-59566807 | None:intergenic | 35.0% |
| ! | GAGAGCTTGAACTTTTTGAT+TGG | + | chr4.1:59565822-59565841 | None:intergenic | 35.0% |
| ! | GCTTGCTCTTGATAACTAAA+AGG | + | chr4.1:59565758-59565777 | None:intergenic | 35.0% |
| ! | GTATTTTATCTACCAACTGG+AGG | - | chr4.1:59565667-59565686 | MS.gene73533:CDS | 35.0% |
| !! | ACTTTTTGATTGGTCCAGAA+TGG | + | chr4.1:59565812-59565831 | None:intergenic | 35.0% |
| !! | ATTGAAATTCAAGTGGGTTG+AGG | + | chr4.1:59566808-59566827 | None:intergenic | 35.0% |
| !!! | TGCTCCAGTATTTGGTTTTA+GGG | - | chr4.1:59566531-59566550 | MS.gene73533:CDS | 35.0% |
| AAACTCTTTAACCTGCCATC+TGG | + | chr4.1:59565895-59565914 | None:intergenic | 40.0% | |
| AAGCTGATGAAGTCTAACTC+AGG | + | chr4.1:59567108-59567127 | None:intergenic | 40.0% | |
| ACATACTTCACTTGCATGAC+TGG | + | chr4.1:59567057-59567076 | None:intergenic | 40.0% | |
| ATAACTTAGATCAACGCACG+GGG | + | chr4.1:59566579-59566598 | None:intergenic | 40.0% | |
| CAAAAAGTTCAAGCTCTCTC+GGG | - | chr4.1:59565824-59565843 | MS.gene73533:intron | 40.0% | |
| CAAACCATGCCTATTTGGAT+CGG | - | chr4.1:59567031-59567050 | MS.gene73533:CDS | 40.0% | |
| CAACCCCTAAAACCAAATAC+TGG | + | chr4.1:59566538-59566557 | None:intergenic | 40.0% | |
| CTCACCTAATCTACGAGAAT+TGG | - | chr4.1:59566664-59566683 | MS.gene73533:CDS | 40.0% | |
| GAGAACTTCGAAAGCAAACA+AGG | - | chr4.1:59566275-59566294 | MS.gene73533:intron | 40.0% | |
| GGACTCTTTATCTAACCAGA+TGG | - | chr4.1:59565877-59565896 | MS.gene73533:intron | 40.0% | |
| GTAAATAACTTCAGCTCGTG+AGG | + | chr4.1:59567229-59567248 | None:intergenic | 40.0% | |
| GTGAAGTATGTGAGAATAGG+TGG | - | chr4.1:59567066-59567085 | MS.gene73533:CDS | 40.0% | |
| GTTGACAAACCATGCCTATT+TGG | - | chr4.1:59567026-59567045 | MS.gene73533:CDS | 40.0% | |
| TCTACGAGAATTGGAAATGG+TGG | - | chr4.1:59566673-59566692 | MS.gene73533:CDS | 40.0% | |
| TCTTTATCTAACCAGATGGC+AGG | - | chr4.1:59565881-59565900 | MS.gene73533:intron | 40.0% | |
| TGAAAGAACTATTGCGGATG+AGG | - | chr4.1:59567199-59567218 | MS.gene73533:CDS | 40.0% | |
| TTGTATGTAGGTACGATCTG+AGG | - | chr4.1:59566990-59567009 | MS.gene73533:CDS | 40.0% | |
| ! | AAGCCTTGAAATGTTGATGG+TGG | + | chr4.1:59566023-59566042 | None:intergenic | 40.0% |
| ! | GTGAAACCTGCTTTAAACGT+CGG | - | chr4.1:59567165-59567184 | MS.gene73533:CDS | 40.0% |
| !! | ACAGTCATCTTTTCTAGCAC+TGG | + | chr4.1:59567147-59567166 | None:intergenic | 40.0% |
| !! | CTTGTTTCTGCTCCAGTATT+TGG | - | chr4.1:59566523-59566542 | MS.gene73533:CDS | 40.0% |
| !!! | CTGCTCCAGTATTTGGTTTT+AGG | - | chr4.1:59566530-59566549 | MS.gene73533:CDS | 40.0% |
| !!! | GCTCCAGTATTTGGTTTTAG+GGG | - | chr4.1:59566532-59566551 | MS.gene73533:CDS | 40.0% |
| !!! | GGTATTTTATAGCGTTGGTC+TGG | + | chr4.1:59565939-59565958 | None:intergenic | 40.0% |
| GCATGAACGCTCTAGCAATT+TGG | - | chr4.1:59566304-59566323 | MS.gene73533:intron | 45.0% | |
| ! | CTACCAACTGGAGGTACAAA+TGG | - | chr4.1:59565676-59565695 | MS.gene73533:CDS | 45.0% |
| ! | GTTCTGGCTGCTTCCTTAAT+TGG | + | chr4.1:59565645-59565664 | None:intergenic | 45.0% |
| ATCTCCAGGCTGCGTATATG+AGG | + | chr4.1:59566350-59566369 | None:intergenic | 50.0% | |
| GGTCCATTTGTACCTCCAGT+TGG | + | chr4.1:59565682-59565701 | None:intergenic | 50.0% | |
| GTCTGATACGCAAGGAGACT+GGG | + | chr4.1:59565559-59565578 | None:intergenic | 50.0% | |
| GTGAGAATAGGTGGCATCTC+TGG | - | chr4.1:59567075-59567094 | MS.gene73533:CDS | 50.0% | |
| TCGTTCAAGCAAAAGGCAGC+TGG | + | chr4.1:59566114-59566133 | None:intergenic | 50.0% | |
| TCTACCTCATATACGCAGCC+TGG | - | chr4.1:59566343-59566362 | MS.gene73533:intron | 50.0% | |
| ! | ACCTGCTTTAAACGTCGGAC+CGG | - | chr4.1:59567170-59567189 | MS.gene73533:CDS | 50.0% |
| ! | CATGACTGGCCGATCCAAAT+AGG | + | chr4.1:59567043-59567062 | None:intergenic | 50.0% |
| ! | GCATGGTTTGTCAACGGAAC+AGG | + | chr4.1:59567021-59567040 | None:intergenic | 50.0% |
| CGTCTGATACGCAAGGAGAC+TGG | + | chr4.1:59565560-59565579 | None:intergenic | 55.0% | |
| CTGGCCGATCCAAATAGGCA+TGG | + | chr4.1:59567038-59567057 | None:intergenic | 55.0% | |
| CTTAGATCAACGCACGGGGT+AGG | + | chr4.1:59566575-59566594 | None:intergenic | 55.0% | |
| GTCTCCTTGCGTATCAGACG+AGG | - | chr4.1:59565560-59565579 | MS.gene73533:CDS | 55.0% | |
| ! | CACGGGGTAGGAAGCTCTAA+TGG | + | chr4.1:59566563-59566582 | None:intergenic | 55.0% |
| ! | TCCGGTCCGACGTTTAAAGC+AGG | + | chr4.1:59567174-59567193 | None:intergenic | 55.0% |
| GGCTCCTCGTCTGATACGCA+AGG | + | chr4.1:59565567-59565586 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 59565537 | 59567263 | 59565537 | ID=MS.gene73533 |
| chr4.1 | mRNA | 59565537 | 59567263 | 59565537 | ID=MS.gene73533.t1;Parent=MS.gene73533 |
| chr4.1 | exon | 59566504 | 59567263 | 59566504 | ID=MS.gene73533.t1.exon1;Parent=MS.gene73533.t1 |
| chr4.1 | CDS | 59566504 | 59567263 | 59566504 | ID=cds.MS.gene73533.t1;Parent=MS.gene73533.t1 |
| chr4.1 | exon | 59566106 | 59566248 | 59566106 | ID=MS.gene73533.t1.exon2;Parent=MS.gene73533.t1 |
| chr4.1 | CDS | 59566106 | 59566248 | 59566106 | ID=cds.MS.gene73533.t1;Parent=MS.gene73533.t1 |
| chr4.1 | exon | 59565537 | 59565800 | 59565537 | ID=MS.gene73533.t1.exon3;Parent=MS.gene73533.t1 |
| chr4.1 | CDS | 59565537 | 59565800 | 59565537 | ID=cds.MS.gene73533.t1;Parent=MS.gene73533.t1 |
| Gene Sequence |
| Protein sequence |
