AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73573

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73573.t1 MTR_6g083270 70.265 491 95 6 1 474 1 457 0.0 635
MS.gene73573.t1 MTR_6g083210 95.862 145 6 0 330 474 158 302 1.64e-96 293
MS.gene73573.t1 MTR_6g083210 95.652 46 2 0 285 330 1 46 7.09e-21 93.2
MS.gene73573.t1 MTR_6g083290 93.750 144 9 0 330 473 170 313 1.49e-93 286
MS.gene73573.t1 MTR_6g083290 63.750 160 44 2 1 160 1 146 2.36e-60 200
MS.gene73573.t1 MTR_6g083300 91.724 145 12 0 329 473 157 301 3.31e-91 280
MS.gene73573.t1 MTR_6g083300 95.652 46 2 0 285 330 1 46 8.50e-21 93.2
MS.gene73573.t1 MTR_6g082950 86.806 144 19 0 330 473 278 421 1.23e-86 272
MS.gene73573.t1 MTR_6g082950 72.414 116 31 1 215 330 52 166 7.85e-48 170
MS.gene73573.t1 MTR_6g083760 86.207 145 20 0 330 474 478 622 6.68e-84 271
MS.gene73573.t1 MTR_6g083760 75.701 107 26 0 224 330 260 366 1.21e-44 166
MS.gene73573.t1 MTR_6g082870 87.500 144 18 0 330 473 515 658 7.34e-84 271
MS.gene73573.t1 MTR_6g082870 76.786 112 26 0 219 330 292 403 6.93e-49 178
MS.gene73573.t1 MTR_6g083310 73.750 160 38 2 1 160 1 156 4.97e-75 233
MS.gene73573.t1 MTR_6g083780 73.793 145 37 1 330 474 507 650 6.22e-66 224
MS.gene73573.t1 MTR_6g083780 51.786 112 50 2 219 330 288 395 4.15e-24 106
MS.gene73573.t1 MTR_6g083740 48.133 241 74 3 285 474 1 241 1.32e-65 211
MS.gene73573.t1 MTR_6g082860 71.034 145 41 1 330 474 214 357 2.45e-64 212
MS.gene73573.t1 MTR_6g082860 72.549 102 28 0 229 330 1 102 1.48e-42 154
MS.gene73573.t1 MTR_6g082830 70.345 145 42 1 330 474 158 301 1.68e-63 208
MS.gene73573.t1 MTR_6g082830 82.609 46 8 0 285 330 1 46 1.06e-16 81.3
MS.gene73573.t1 MTR_6g083200 63.924 158 40 3 1 158 1 141 2.37e-59 194
MS.gene73573.t1 MTR_8g104520 67.114 149 46 3 329 474 497 645 5.43e-58 202
MS.gene73573.t1 MTR_8g104520 47.863 117 56 2 217 330 264 378 1.72e-23 104
MS.gene73573.t1 MTR_1g110140 57.042 142 61 0 329 470 209 350 5.14e-51 177
MS.gene73573.t1 MTR_1g110140 56.522 69 30 0 262 330 29 97 7.68e-19 88.2
MS.gene73573.t1 MTR_6g082930 72.414 116 31 1 215 330 52 166 2.11e-48 170
MS.gene73573.t1 MTR_1g110220 56.429 140 61 0 330 469 408 547 2.71e-48 174
MS.gene73573.t1 MTR_1g110220 57.971 69 29 0 262 330 252 320 8.80e-19 89.4
MS.gene73573.t1 MTR_1g110260 57.857 140 59 0 330 469 388 527 8.91e-47 170
MS.gene73573.t1 MTR_1g110260 49.593 123 47 4 212 330 164 275 4.23e-24 105
MS.gene73573.t1 MTR_1g027420 36.861 274 117 5 254 474 273 543 2.52e-46 169
MS.gene73573.t1 MTR_7g082470 55.714 140 61 1 330 468 488 627 2.59e-44 165
MS.gene73573.t1 MTR_7g082470 41.985 131 70 3 204 330 247 375 1.26e-22 101
MS.gene73573.t1 MTR_7g082430 53.901 141 65 0 328 468 467 607 2.72e-44 165
MS.gene73573.t1 MTR_7g082430 46.087 115 58 2 220 330 242 356 1.84e-22 101
MS.gene73573.t1 MTR_7g085860 55.396 139 61 1 330 468 319 456 8.58e-44 160
MS.gene73573.t1 MTR_7g082510 53.957 139 64 0 330 468 500 638 1.06e-43 163
MS.gene73573.t1 MTR_7g082510 41.860 129 57 2 220 330 259 387 1.22e-21 98.6
MS.gene73573.t1 MTR_7g082380 53.191 141 65 1 330 469 215 355 5.56e-43 156
MS.gene73573.t1 MTR_7g082380 48.515 101 51 1 231 330 2 102 7.98e-24 103
MS.gene73573.t1 MTR_7g082460 53.957 139 64 0 330 468 504 642 1.06e-42 160
MS.gene73573.t1 MTR_7g082460 43.846 130 69 2 204 330 263 391 1.12e-25 110
MS.gene73573.t1 MTR_4g044393 52.555 137 65 0 330 466 688 824 1.80e-42 161
MS.gene73573.t1 MTR_4g044393 40.741 108 60 2 227 330 468 575 4.21e-18 87.8
MS.gene73573.t1 MTR_1g080780 46.104 154 65 3 8 161 6 141 2.22e-42 147
MS.gene73573.t1 MTR_7g082490 52.555 137 65 0 330 466 265 401 4.51e-42 154
MS.gene73573.t1 MTR_7g082490 49.107 112 53 2 223 330 62 173 1.37e-24 105
MS.gene73573.t1 MTR_1g080820 50.993 151 54 4 11 158 10 143 6.05e-42 146
MS.gene73573.t1 MTR_1g080800 51.948 154 54 5 11 161 10 146 6.77e-42 146
MS.gene73573.t1 MTR_7g082360 53.623 138 60 3 330 466 192 326 1.29e-41 152
MS.gene73573.t1 MTR_1g027160 46.897 145 75 2 328 472 154 296 1.73e-41 151
MS.gene73573.t1 MTR_7g082300 52.055 146 70 0 329 474 703 848 1.83e-41 158
MS.gene73573.t1 MTR_7g082300 44.966 149 69 7 194 330 445 592 1.68e-23 104
MS.gene73573.t1 MTR_1g027460 49.254 134 67 1 328 461 181 313 2.03e-41 151
MS.gene73573.t1 MTR_1g027460 50.725 69 34 0 262 330 5 73 2.15e-13 71.6
MS.gene73573.t1 MTR_1g115485 53.285 137 64 0 330 466 515 651 3.06e-41 157
MS.gene73573.t1 MTR_1g115485 44.068 118 60 3 218 330 286 402 1.42e-21 98.6
MS.gene73573.t1 MTR_0394s0020 50.365 137 68 0 330 466 228 364 3.28e-41 151
MS.gene73573.t1 MTR_1g027250 50.000 134 66 1 328 461 154 286 7.67e-41 149
MS.gene73573.t1 MTR_1g026990 49.254 134 67 1 328 461 154 286 1.98e-40 148
MS.gene73573.t1 MTR_1g027540 48.889 135 68 1 328 462 256 389 1.04e-39 149
MS.gene73573.t1 MTR_1g027540 49.275 69 34 1 262 330 81 148 3.78e-11 65.5
MS.gene73573.t1 MTR_7g082110 50.360 139 69 0 330 468 690 828 2.38e-39 152
MS.gene73573.t1 MTR_7g082110 40.708 113 64 1 221 330 465 577 1.08e-19 92.8
MS.gene73573.t1 MTR_1g080810 49.007 151 57 5 11 158 10 143 2.43e-39 139
MS.gene73573.t1 MTR_7g082400 51.429 140 67 1 330 468 238 377 5.39e-39 146
MS.gene73573.t1 MTR_7g082400 40.385 104 49 3 232 330 30 125 2.81e-11 65.5
MS.gene73573.t1 MTR_7g082280 47.531 162 73 2 306 466 568 718 8.57e-39 150
MS.gene73573.t1 MTR_7g082280 37.168 113 59 2 218 330 397 497 6.55e-15 77.8
MS.gene73573.t1 MTR_4g073230 51.825 137 63 2 330 465 453 587 1.46e-38 148
MS.gene73573.t1 MTR_4g073230 42.241 116 53 2 216 330 240 342 2.19e-19 91.7
MS.gene73573.t1 MTR_1g027320 48.148 135 67 2 328 461 154 286 1.55e-38 143
MS.gene73573.t1 MTR_3g028630 41.111 180 85 4 299 461 208 383 2.35e-38 144
MS.gene73573.t1 MTR_3g028630 52.747 91 39 2 243 330 54 143 6.56e-18 86.3
MS.gene73573.t1 MTR_1g031430 44.295 149 77 3 329 473 35 181 4.40e-38 138
MS.gene73573.t1 MTR_1g027990 39.791 191 94 4 288 461 494 680 5.08e-38 147
MS.gene73573.t1 MTR_1g027990 58.333 72 28 2 260 330 369 439 1.49e-14 76.6
MS.gene73573.t1 MTR_1g031540 47.917 144 71 2 329 469 149 291 1.14e-37 147
MS.gene73573.t1 MTR_1g110230 54.098 122 56 0 348 469 472 593 1.16e-37 145
MS.gene73573.t1 MTR_1g110230 43.066 137 70 3 200 330 223 357 6.72e-22 99.4
MS.gene73573.t1 MTR_1g031540 47.917 144 71 2 329 469 441 583 1.31e-37 147
MS.gene73573.t1 MTR_1g031540 52.174 69 33 0 262 330 263 331 1.50e-14 77.0
MS.gene73573.t1 MTR_1g028280 47.794 136 70 1 329 464 487 621 1.66e-37 145
MS.gene73573.t1 MTR_1g028280 58.333 72 29 1 260 330 307 378 5.43e-17 84.3
MS.gene73573.t1 MTR_1g028290 49.635 137 68 1 329 465 442 577 1.93e-37 145
MS.gene73573.t1 MTR_1g028290 42.105 114 58 2 218 330 226 332 4.81e-19 90.5
MS.gene73573.t1 MTR_1g028280 47.794 136 70 1 329 464 526 660 1.99e-37 145
MS.gene73573.t1 MTR_1g028280 58.333 72 29 1 260 330 346 417 6.06e-17 84.0
MS.gene73573.t1 MTR_1g031320 49.265 136 68 1 329 464 458 592 2.65e-37 145
MS.gene73573.t1 MTR_1g031320 47.619 84 36 1 262 345 280 355 1.05e-15 80.1
MS.gene73573.t1 MTR_1g031580 46.575 146 77 1 329 474 454 598 4.86e-37 144
MS.gene73573.t1 MTR_1g031580 43.617 94 45 1 252 345 266 351 2.81e-15 79.0
MS.gene73573.t1 MTR_1g031530 47.761 134 67 2 329 461 183 314 5.00e-37 139
MS.gene73573.t1 MTR_1g031530 43.662 71 40 0 260 330 3 73 1.21e-12 69.3
MS.gene73573.t1 MTR_1g027680 48.175 137 65 2 328 461 544 677 5.68e-37 144
MS.gene73573.t1 MTR_1g027680 41.525 118 57 3 214 330 330 436 1.34e-15 80.1
MS.gene73573.t1 MTR_1g031460 47.794 136 70 1 329 464 445 579 1.01e-36 143
MS.gene73573.t1 MTR_1g031460 52.174 69 33 0 262 330 267 335 2.22e-15 79.0
MS.gene73573.t1 MTR_1g027690 49.265 136 67 2 329 464 441 574 1.50e-36 142
MS.gene73573.t1 MTR_1g027690 41.053 95 46 2 253 345 252 338 6.73e-14 74.3
MS.gene73573.t1 MTR_1g027410 47.761 134 69 1 328 461 253 385 1.56e-36 139
MS.gene73573.t1 MTR_1g027410 53.623 69 31 1 262 330 78 145 1.39e-13 72.8
MS.gene73573.t1 MTR_1g027500 48.551 138 67 2 329 465 457 591 2.38e-36 142
MS.gene73573.t1 MTR_1g027500 46.835 79 40 1 254 330 269 347 2.16e-13 72.8
MS.gene73573.t1 MTR_1g027840 40.000 190 92 6 289 461 128 312 2.47e-36 137
MS.gene73573.t1 MTR_1g027840 60.000 70 27 1 261 330 4 72 7.92e-17 82.0
MS.gene73573.t1 MTR_1g028020 43.836 146 81 1 328 473 299 443 3.12e-36 142
MS.gene73573.t1 MTR_1g028020 33.571 140 76 5 196 330 64 191 4.80e-14 75.1
MS.gene73573.t1 MTR_1g027930 41.040 173 84 4 306 461 85 256 3.25e-36 136
MS.gene73573.t1 MTR_1g108910 50.714 140 52 1 330 469 196 318 3.74e-36 136
MS.gene73573.t1 MTR_1g108910 44.231 104 55 2 229 330 4 106 1.51e-11 65.9
MS.gene73573.t1 MTR_6g045030 45.802 131 70 1 331 461 263 392 5.55e-36 138
MS.gene73573.t1 MTR_6g045030 41.481 135 61 3 196 330 36 152 2.03e-17 84.7
MS.gene73573.t1 MTR_1g110270 50.758 132 59 1 330 461 476 601 1.01e-35 140
MS.gene73573.t1 MTR_1g110270 48.333 120 51 2 236 344 261 380 2.50e-23 103
MS.gene73573.t1 MTR_1g028100 36.649 191 100 4 289 462 189 375 1.52e-35 137
MS.gene73573.t1 MTR_1g028100 37.302 126 59 5 207 330 26 133 1.55e-13 72.8
MS.gene73573.t1 MTR_1g031280 49.254 134 65 2 329 461 499 630 1.98e-35 139
MS.gene73573.t1 MTR_1g031280 38.136 118 61 2 216 332 285 391 1.41e-15 79.7
MS.gene73573.t1 MTR_1g027830 39.286 196 94 6 283 461 452 639 2.10e-35 140
MS.gene73573.t1 MTR_1g027830 42.241 116 55 3 216 330 295 399 8.17e-17 83.6
MS.gene73573.t1 MTR_1g027070 43.836 146 81 1 328 473 550 694 2.43e-35 140
MS.gene73573.t1 MTR_1g027070 42.857 119 59 3 214 330 331 442 1.64e-16 82.8
MS.gene73573.t1 MTR_1g027730 44.138 145 79 2 319 462 170 313 2.74e-35 134
MS.gene73573.t1 MTR_1g027730 55.714 70 30 1 261 330 4 72 3.41e-15 77.4
MS.gene73573.t1 MTR_1g028170 41.781 146 84 1 328 473 268 412 3.11e-35 136
MS.gene73573.t1 MTR_1g028170 37.795 127 59 5 206 330 52 160 6.06e-14 73.9
MS.gene73573.t1 MTR_7g115220 48.936 141 55 2 27 167 69 192 3.87e-35 130
MS.gene73573.t1 MTR_1g027370 46.939 147 75 2 329 474 457 601 7.08e-35 137
MS.gene73573.t1 MTR_1g027370 37.097 124 62 3 211 330 236 347 8.56e-14 73.9
MS.gene73573.t1 MTR_1g031510 48.507 134 66 2 329 461 470 601 2.90e-34 136
MS.gene73573.t1 MTR_1g031510 38.596 114 56 3 220 330 258 360 2.62e-15 79.0
MS.gene73573.t1 MTR_1g031200 41.989 181 81 6 299 461 310 484 3.12e-34 135
MS.gene73573.t1 MTR_1g031200 47.826 69 36 0 262 330 176 244 7.23e-14 73.9
MS.gene73573.t1 MTR_1g028130 43.750 144 78 3 329 471 443 584 1.40e-33 134
MS.gene73573.t1 MTR_1g028130 38.596 114 64 2 218 330 225 333 8.52e-17 83.6
MS.gene73573.t1 MTR_1g027050 35.644 202 108 5 289 473 535 731 1.64e-33 134
MS.gene73573.t1 MTR_1g027050 55.556 72 29 2 261 330 409 479 9.71e-14 74.3
MS.gene73573.t1 MTR_1g027970 46.324 136 71 2 329 464 443 576 3.19e-33 133
MS.gene73573.t1 MTR_1g027970 42.500 80 44 1 253 330 254 333 1.78e-13 73.2
MS.gene73573.t1 MTR_1g027140 35.644 202 108 5 289 473 532 728 3.24e-33 134
MS.gene73573.t1 MTR_1g027140 53.521 71 30 2 262 330 407 476 7.68e-13 71.2
MS.gene73573.t1 MTR_1g028080 43.056 144 79 3 329 471 443 584 7.16e-33 132
MS.gene73573.t1 MTR_1g028080 40.351 114 62 2 218 330 225 333 8.15e-17 83.6
MS.gene73573.t1 MTR_1g027150 46.429 140 68 4 329 465 412 547 1.74e-32 130
MS.gene73573.t1 MTR_1g027150 37.500 120 62 3 252 366 222 333 5.72e-15 77.8
MS.gene73573.t1 MTR_1g027060 44.681 141 73 3 329 467 359 496 3.06e-32 129
MS.gene73573.t1 MTR_1g027060 41.935 93 46 1 253 345 172 256 2.93e-15 78.6
MS.gene73573.t1 MTR_1g026940 46.715 137 68 3 329 464 456 588 3.28e-32 130
MS.gene73573.t1 MTR_1g026940 46.914 81 41 1 252 330 266 346 1.46e-15 79.7
MS.gene73573.t1 MTR_1g027040 45.714 140 70 3 329 465 414 550 6.71e-32 129
MS.gene73573.t1 MTR_1g027040 39.831 118 58 3 254 366 226 335 1.23e-15 79.7
MS.gene73573.t1 MTR_1g027820 45.270 148 75 3 329 473 410 554 7.11e-32 129
MS.gene73573.t1 MTR_1g027820 34.109 129 76 2 217 345 188 307 1.31e-17 85.9
MS.gene73573.t1 MTR_1g027890 45.390 141 71 4 329 467 256 392 3.08e-31 125
MS.gene73573.t1 MTR_1g027960 47.059 136 67 3 329 462 431 563 4.07e-31 126
MS.gene73573.t1 MTR_1g027960 37.692 130 65 3 218 345 213 328 9.47e-18 86.3
MS.gene73573.t1 MTR_1g027700 46.099 141 71 3 329 467 187 324 4.42e-31 123
MS.gene73573.t1 MTR_1g027700 42.857 91 44 1 255 345 2 84 1.67e-15 78.2
MS.gene73573.t1 MTR_1g027030 40.299 134 80 0 328 461 586 719 1.66e-30 125
MS.gene73573.t1 MTR_1g027030 40.336 119 62 4 214 330 367 478 1.72e-13 73.2
MS.gene73573.t1 MTR_1g027030 40.299 134 80 0 328 461 536 669 1.79e-30 125
MS.gene73573.t1 MTR_1g027030 57.895 57 22 1 276 330 372 428 7.19e-11 65.1
MS.gene73573.t1 MTR_1g031560 42.529 174 80 4 306 461 448 619 1.94e-30 125
MS.gene73573.t1 MTR_1g031560 38.532 109 55 2 223 330 281 378 2.64e-14 75.9
MS.gene73573.t1 MTR_0690s0010 44.444 135 71 2 329 462 391 522 3.23e-30 124
MS.gene73573.t1 MTR_0690s0010 41.121 107 54 2 240 345 190 288 1.92e-16 82.4
MS.gene73573.t1 MTR_3g028650 46.269 134 69 2 329 461 412 543 6.82e-30 123
MS.gene73573.t1 MTR_3g028650 42.157 102 49 2 246 345 214 307 2.32e-16 82.0
MS.gene73573.t1 MTR_1g110160 49.219 128 49 3 348 474 466 578 1.05e-29 122
MS.gene73573.t1 MTR_1g110160 55.072 69 31 0 262 330 298 366 1.91e-18 88.6
MS.gene73573.t1 MTR_6g445600 43.704 135 72 2 329 462 417 548 1.22e-29 122
MS.gene73573.t1 MTR_6g445600 36.923 130 66 3 218 345 199 314 4.79e-17 84.3
MS.gene73573.t1 MTR_1g031520 46.617 133 70 1 329 461 467 598 1.86e-29 122
MS.gene73573.t1 MTR_1g031520 38.739 111 62 1 220 330 253 357 1.42e-14 76.6
MS.gene73573.t1 MTR_1g027200 44.898 147 69 3 328 473 385 520 2.23e-29 121
MS.gene73573.t1 MTR_1g027200 38.136 118 61 2 215 330 169 276 1.10e-15 79.7
MS.gene73573.t1 MTR_1g027440 42.537 134 63 2 328 461 432 551 1.15e-28 119
MS.gene73573.t1 MTR_1g027440 52.174 69 33 0 262 330 256 324 8.32e-14 73.9
MS.gene73573.t1 MTR_1g028220 44.853 136 70 3 329 462 414 546 4.00e-28 117
MS.gene73573.t1 MTR_1g028220 36.800 125 59 3 223 345 205 311 2.14e-17 85.1
MS.gene73573.t1 MTR_7g060570 44.697 132 70 2 330 461 494 622 4.71e-28 118
MS.gene73573.t1 MTR_7g060570 41.414 99 54 2 234 330 288 384 1.78e-13 73.6
MS.gene73573.t1 MTR_4g073220 40.741 135 72 4 329 461 468 596 4.56e-24 106
MS.gene73573.t1 MTR_4g073220 47.222 72 38 0 259 330 286 357 1.25e-13 73.6
MS.gene73573.t1 MTR_1g031470 51.163 86 39 2 377 461 4 87 1.80e-21 90.1
MS.gene73573.t1 MTR_2g036460 42.143 140 70 7 330 464 296 429 3.47e-21 96.3
MS.gene73573.t1 MTR_2g036490 40.310 129 69 5 339 464 296 419 6.60e-21 95.5
MS.gene73573.t1 MTR_1g031400 52.000 75 36 0 329 403 173 247 1.75e-20 91.3
MS.gene73573.t1 MTR_2g036500 41.406 128 67 4 333 458 231 352 2.03e-20 93.6
MS.gene73573.t1 MTR_1g099400 43.411 129 61 8 339 461 685 807 3.91e-20 94.4
MS.gene73573.t1 MTR_1g031220 58.730 63 25 1 329 391 23 84 1.61e-19 83.6
MS.gene73573.t1 MTR_2g036440 40.310 129 67 5 333 458 232 353 1.68e-19 90.9
MS.gene73573.t1 MTR_2g080080 40.288 139 74 6 339 473 643 776 1.32e-18 89.4
MS.gene73573.t1 MTR_2g073250 42.029 138 65 8 339 469 647 776 1.83e-18 89.0
MS.gene73573.t1 MTR_2g080100 33.862 189 111 8 289 473 567 745 2.32e-18 88.6
MS.gene73573.t1 MTR_3g107070 45.802 131 58 8 339 465 635 756 3.79e-18 88.2
MS.gene73573.t1 MTR_1g031450 39.474 114 56 3 221 332 269 371 2.20e-17 84.7
MS.gene73573.t1 MTR_6g043510 39.259 135 67 8 334 461 647 773 2.37e-17 85.5
MS.gene73573.t1 MTR_8g030500 36.170 141 70 6 335 461 641 775 6.79e-17 84.0
MS.gene73573.t1 MTR_1g032930 33.566 143 79 6 330 461 651 788 1.91e-16 82.8
MS.gene73573.t1 MTR_6g043790 38.806 134 65 9 334 459 652 776 2.29e-16 82.4
MS.gene73573.t1 MTR_2g036480 37.410 139 79 6 330 464 244 378 4.02e-16 80.5
MS.gene73573.t1 MTR_2g054870 39.259 135 69 6 334 458 267 398 4.13e-16 80.9
MS.gene73573.t1 MTR_4g113710 38.931 131 66 7 339 459 270 396 7.40e-16 80.1
MS.gene73573.t1 MTR_4g114270 40.800 125 66 5 339 461 687 805 8.74e-16 80.5
MS.gene73573.t1 MTR_2g036430 38.655 119 68 3 333 449 215 330 9.23e-16 79.3
MS.gene73573.t1 MTR_4g114250 38.400 125 69 5 339 461 689 807 2.13e-15 79.3
MS.gene73573.t1 MTR_0280s0040 36.567 134 70 8 335 461 651 776 4.28e-15 78.6
MS.gene73573.t1 MTR_4g114240 36.154 130 73 5 337 461 698 822 6.26e-15 77.8
MS.gene73573.t1 MTR_1g012550 41.026 117 56 7 339 449 663 772 7.79e-15 77.8
MS.gene73573.t1 MTR_2g103810 43.077 130 66 6 339 465 655 779 1.30e-14 77.0
MS.gene73573.t1 MTR_4g114280 38.525 122 71 4 340 459 715 834 2.16e-14 76.3
MS.gene73573.t1 MTR_8g028065 31.507 146 86 3 317 461 723 855 3.11e-14 75.9
MS.gene73573.t1 MTR_4g091570 34.868 152 84 4 318 468 908 1045 5.80e-14 75.1
MS.gene73573.t1 MTR_2g011210 38.168 131 77 3 340 469 691 818 6.43e-14 74.7
MS.gene73573.t1 MTR_2g089360 36.364 132 73 7 335 461 653 778 1.41e-13 73.6
MS.gene73573.t1 MTR_2g011190 32.867 143 92 3 329 470 676 815 3.25e-13 72.4
MS.gene73573.t1 MTR_5g033690 35.938 128 74 3 340 461 474 599 4.45e-13 72.0
MS.gene73573.t1 MTR_2g089440 32.836 134 75 6 335 461 426 551 6.74e-13 71.2
MS.gene73573.t1 MTR_2g067970 34.375 128 73 5 339 461 767 888 6.86e-13 71.6
MS.gene73573.t1 MTR_4g040480 33.088 136 88 2 340 474 676 809 9.08e-13 71.2
MS.gene73573.t1 MTR_2g089440 32.836 134 75 6 335 461 658 783 1.07e-12 70.9
MS.gene73573.t1 MTR_2g067990 32.812 128 75 5 339 461 879 1000 1.20e-12 70.9
MS.gene73573.t1 MTR_8g052050 37.313 134 79 4 330 461 639 769 1.28e-12 70.5
MS.gene73573.t1 MTR_1g021630 37.037 135 81 4 340 473 533 664 2.54e-12 69.7
MS.gene73573.t1 MTR_5g068260 34.559 136 83 5 340 472 498 630 2.75e-12 69.3
MS.gene73573.t1 MTR_8g052080 37.313 134 79 4 330 461 640 770 3.06e-12 69.3
MS.gene73573.t1 MTR_4g093070 36.232 138 80 5 340 471 511 646 3.10e-12 69.3
MS.gene73573.t1 MTR_7g056617 38.983 118 63 4 219 333 438 549 3.22e-12 69.3
MS.gene73573.t1 MTR_2g068650 32.812 128 75 5 339 461 617 738 3.26e-12 69.3
MS.gene73573.t1 MTR_7g056590 34.752 141 84 3 322 461 514 647 3.29e-12 69.3
MS.gene73573.t1 MTR_8g067690 32.653 147 83 4 340 473 519 662 5.13e-12 68.6
MS.gene73573.t1 MTR_8g052570 35.821 134 81 4 330 461 217 347 9.47e-12 67.0
MS.gene73573.t1 MTR_8g052517 35.821 134 81 4 330 461 217 347 9.47e-12 67.0
MS.gene73573.t1 MTR_8g052190 35.821 134 81 4 330 461 631 761 1.01e-11 67.8
MS.gene73573.t1 MTR_8g052190 35.821 134 81 4 330 461 632 762 1.04e-11 67.8
MS.gene73573.t1 MTR_5g013070 35.338 133 74 7 339 465 674 800 1.29e-11 67.4
MS.gene73573.t1 MTR_4g081665 34.146 123 78 2 340 461 661 781 1.37e-11 67.4
MS.gene73573.t1 MTR_5g065130 36.923 130 69 6 340 463 504 626 1.67e-11 67.0
MS.gene73573.t1 MTR_8g052060 35.075 134 82 4 330 461 596 726 2.20e-11 66.6
MS.gene73573.t1 MTR_4g081750 33.333 123 79 2 340 461 1008 1128 2.31e-11 67.0
MS.gene73573.t1 MTR_7g116130 29.348 184 95 8 272 450 475 628 2.87e-11 66.2
MS.gene73573.t1 MTR_4g093080 36.641 131 66 6 340 465 513 631 2.99e-11 66.2
MS.gene73573.t1 MTR_1g105710 36.842 171 81 8 172 334 248 399 3.09e-11 66.2
MS.gene73573.t1 MTR_8g052290 35.821 134 81 4 330 461 244 374 3.20e-11 65.5
MS.gene73573.t1 MTR_7g056510 32.857 140 69 5 219 333 417 556 3.49e-11 66.2
MS.gene73573.t1 MTR_8g067930 33.333 138 83 4 340 471 503 637 3.65e-11 65.9
MS.gene73573.t1 MTR_7g057170 36.364 121 66 5 212 330 548 659 3.76e-11 65.9
MS.gene73573.t1 MTR_8g061110 31.788 151 88 5 330 473 559 701 3.78e-11 65.9
MS.gene73573.t1 MTR_2g006910 28.788 132 83 3 340 462 480 609 3.83e-11 65.9
MS.gene73573.t1 MTR_2g006910 28.788 132 83 3 340 462 480 609 3.84e-11 65.9
MS.gene73573.t1 MTR_7g056510 32.857 140 69 5 219 333 427 566 3.88e-11 65.9
MS.gene73573.t1 MTR_1g105835 31.481 162 91 7 316 472 188 334 4.21e-11 64.7
MS.gene73573.t1 MTR_7g057170 36.364 121 66 5 212 330 548 659 4.23e-11 65.9
MS.gene73573.t1 MTR_7g056510 32.857 140 69 5 219 333 427 566 4.29e-11 65.9
MS.gene73573.t1 MTR_1g021610 33.333 135 84 5 340 472 516 646 4.43e-11 65.5
MS.gene73573.t1 MTR_7g056510 32.857 140 69 5 219 333 427 566 4.50e-11 65.9
MS.gene73573.t1 MTR_8g041650 34.586 133 71 6 340 464 500 624 4.89e-11 65.5
MS.gene73573.t1 MTR_5g055070 35.484 124 74 4 340 461 663 782 6.07e-11 65.5
MS.gene73573.t1 MTR_8g013560 36.066 122 65 5 218 333 441 555 6.61e-11 65.1
MS.gene73573.t1 MTR_8g465150 33.071 127 73 3 340 461 681 800 7.10e-11 65.1
MS.gene73573.t1 MTR_7g056680 35.772 123 76 2 340 461 666 786 7.30e-11 65.1
MS.gene73573.t1 MTR_7g056680 35.772 123 76 2 340 461 661 781 7.35e-11 65.1
MS.gene73573.t1 MTR_7g056680 35.772 123 76 2 340 461 665 785 7.36e-11 65.1
MS.gene73573.t1 MTR_8g052513 36.567 134 80 4 330 461 617 747 7.42e-11 65.1
MS.gene73573.t1 MTR_7g056680 35.772 123 76 2 340 461 670 790 7.64e-11 65.1
MS.gene73573.t1 MTR_7g056680 35.772 123 76 2 340 461 505 625 7.74e-11 64.7
MS.gene73573.t1 MTR_5g055070 35.484 124 74 4 340 461 621 740 7.84e-11 65.1
MS.gene73573.t1 MTR_8g052200 35.075 134 82 4 330 461 617 747 8.45e-11 64.7
MS.gene73573.t1 MTR_2g011240 34.091 132 81 4 207 333 420 550 9.05e-11 64.7
MS.gene73573.t1 MTR_8g052420 33.582 134 84 4 330 461 620 750 9.57e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73573.t1 AT1G66980 50.993 151 67 4 330 474 940 1089 4.55e-40 154
MS.gene73573.t1 AT1G66980 51.786 56 27 0 275 330 776 831 2.87e-12 69.7
MS.gene73573.t1 AT1G66980 50.993 151 67 4 330 474 957 1106 4.81e-40 154
MS.gene73573.t1 AT1G66980 51.786 56 27 0 275 330 793 848 3.01e-12 69.7
MS.gene73573.t1 AT1G66980 50.993 151 67 4 330 474 984 1133 5.39e-40 154
MS.gene73573.t1 AT1G66980 51.786 56 27 0 275 330 820 875 3.28e-12 69.7
MS.gene73573.t1 AT1G66980 50.993 151 67 4 330 474 986 1135 5.60e-40 154
MS.gene73573.t1 AT1G66980 51.786 56 27 0 275 330 822 877 3.06e-12 69.7
MS.gene73573.t1 AT1G70250 52.448 143 62 3 329 466 611 752 6.10e-40 154
MS.gene73573.t1 AT1G70250 36.932 176 90 8 164 336 351 508 4.41e-17 84.7
MS.gene73573.t1 AT1G66910 49.664 149 71 3 330 474 500 648 2.35e-39 151
MS.gene73573.t1 AT1G66910 33.058 121 70 4 221 336 282 396 5.62e-14 74.7
MS.gene73573.t1 AT1G66910 49.664 149 71 3 330 474 497 645 2.39e-39 151
MS.gene73573.t1 AT1G66910 35.294 119 72 3 219 336 279 393 1.45e-13 73.6
MS.gene73573.t1 AT5G38280 49.660 147 71 2 330 473 484 630 2.02e-38 148
MS.gene73573.t1 AT5G38280 42.857 147 69 6 191 336 248 380 7.71e-20 93.2
MS.gene73573.t1 AT5G38280 49.660 147 71 2 330 473 484 630 2.03e-38 148
MS.gene73573.t1 AT5G38280 44.218 147 67 7 191 336 248 380 6.73e-20 93.2
MS.gene73573.t1 AT1G66920 52.593 135 61 2 330 462 460 593 3.51e-38 147
MS.gene73573.t1 AT1G66920 36.441 118 55 6 227 336 251 356 6.30e-13 71.6
MS.gene73573.t1 AT1G66920 52.593 135 61 2 330 462 434 567 3.57e-38 147
MS.gene73573.t1 AT1G67000 48.734 158 66 4 330 473 709 865 4.24e-38 148
MS.gene73573.t1 AT1G67000 37.815 119 61 6 220 336 498 605 1.96e-12 70.1
MS.gene73573.t1 AT1G66920 52.593 135 61 2 330 462 452 585 4.51e-38 147
MS.gene73573.t1 AT1G66920 36.441 118 55 6 227 336 243 348 6.46e-13 71.2
MS.gene73573.t1 AT5G38240 51.389 144 65 4 330 469 417 559 7.22e-38 146
MS.gene73573.t1 AT5G38240 38.129 139 57 5 205 330 192 314 1.80e-14 76.3
MS.gene73573.t1 AT5G39030 47.973 148 74 2 330 474 650 797 8.73e-38 147
MS.gene73573.t1 AT5G39030 32.796 186 95 10 154 336 388 546 9.28e-14 74.3
MS.gene73573.t1 AT4G18250 53.237 139 59 4 330 462 509 647 8.83e-38 147
MS.gene73573.t1 AT4G18250 45.833 120 51 4 219 336 298 405 5.11e-21 96.7
MS.gene73573.t1 AT5G38240 51.389 144 65 4 330 469 481 623 9.52e-38 146
MS.gene73573.t1 AT5G38240 41.739 115 47 4 220 330 280 378 1.83e-13 73.2
MS.gene73573.t1 AT5G38240 51.389 144 65 4 330 469 463 605 9.60e-38 146
MS.gene73573.t1 AT5G38240 38.129 139 57 5 205 330 238 360 1.86e-14 76.3
MS.gene73573.t1 AT5G39030 47.973 148 74 2 330 474 644 791 1.22e-37 147
MS.gene73573.t1 AT5G39030 32.796 186 95 10 154 336 382 540 9.16e-14 74.3
MS.gene73573.t1 AT5G38250 50.000 144 67 4 330 469 460 602 4.91e-37 144
MS.gene73573.t1 AT5G38250 33.594 128 71 4 209 336 249 362 1.28e-12 70.5
MS.gene73573.t1 AT5G39020 47.260 146 76 1 330 474 648 793 1.10e-36 144
MS.gene73573.t1 AT5G39020 44.444 117 53 4 220 336 440 544 1.82e-16 82.8
MS.gene73573.t1 AT3G04720 44.805 154 67 4 23 175 72 208 1.23e-35 132
MS.gene73573.t1 AT5G38260 49.286 140 67 3 330 465 473 612 1.23e-35 140
MS.gene73573.t1 AT5G38260 37.838 111 54 3 226 336 274 369 6.34e-13 71.6
MS.gene73573.t1 AT1G66930 47.826 138 67 2 330 462 499 636 9.28e-34 135
MS.gene73573.t1 AT1G66930 35.878 131 74 5 209 336 272 395 1.16e-12 70.9
MS.gene73573.t1 AT1G66930 47.826 138 67 2 330 462 468 605 9.58e-34 134
MS.gene73573.t1 AT1G66930 47.826 138 67 2 330 462 708 845 1.55e-33 135
MS.gene73573.t1 AT1G66930 36.508 126 70 5 214 336 486 604 2.85e-13 72.8
MS.gene73573.t1 AT5G24080 43.077 130 59 7 339 461 693 814 1.39e-20 95.9
MS.gene73573.t1 AT4G32300 44.056 143 67 7 339 472 655 793 1.52e-20 95.5
MS.gene73573.t1 AT5G24080 43.846 130 58 7 339 461 566 687 1.60e-20 95.5
MS.gene73573.t1 AT5G24080 43.846 130 58 7 339 461 566 687 1.60e-20 95.5
MS.gene73573.t1 AT1G34300 40.984 122 59 5 335 449 642 757 7.51e-16 80.9
MS.gene73573.t1 AT4G00340 37.008 127 63 5 335 449 618 739 2.81e-15 79.0
MS.gene73573.t1 AT4G00340 37.008 127 63 5 335 449 639 760 2.95e-15 79.0
MS.gene73573.t1 AT2G19130 37.500 136 73 6 335 465 652 780 3.97e-15 78.6
MS.gene73573.t1 AT5G20050 37.209 129 59 4 335 449 269 389 4.31e-15 77.8
MS.gene73573.t1 AT2G48010 31.915 141 89 5 326 462 435 572 1.84e-13 73.2
MS.gene73573.t1 AT4G23190 38.760 129 66 5 208 333 201 319 3.25e-13 72.4
MS.gene73573.t1 AT4G23190 38.760 129 66 5 208 333 201 319 3.25e-13 72.4
MS.gene73573.t1 AT4G23190 38.760 129 66 5 208 333 279 397 4.14e-13 72.0
MS.gene73573.t1 AT4G04540 36.090 133 78 4 340 472 517 642 4.49e-13 72.0
MS.gene73573.t1 AT4G04540 36.090 133 78 4 340 472 488 613 4.79e-13 72.0
MS.gene73573.t1 AT4G23190 38.760 129 66 5 208 333 279 397 5.76e-13 71.6
MS.gene73573.t1 AT4G23160 36.879 141 77 7 340 473 523 658 7.63e-13 71.2
MS.gene73573.t1 AT4G04570 35.821 134 79 4 340 473 512 638 4.22e-12 68.9
MS.gene73573.t1 AT1G11340 36.957 138 77 5 340 473 679 810 6.19e-12 68.6
MS.gene73573.t1 AT2G14510 32.520 123 66 3 209 330 508 614 6.55e-12 68.6
MS.gene73573.t1 AT2G14510 32.520 123 66 3 209 330 500 606 7.00e-12 68.6
MS.gene73573.t1 AT1G56130 33.588 131 81 4 340 468 856 982 7.59e-12 68.6
MS.gene73573.t1 AT1G56130 33.588 131 81 4 340 468 708 834 7.83e-12 68.2
MS.gene73573.t1 AT1G56130 33.588 131 81 4 340 468 657 783 8.05e-12 68.2
MS.gene73573.t1 AT2G14440 31.707 123 67 3 209 330 501 607 9.02e-12 68.2
MS.gene73573.t1 AT1G36005 50.000 66 31 2 272 337 4 67 1.49e-11 63.5
MS.gene73573.t1 AT1G11350 36.054 147 86 5 329 472 665 806 2.56e-11 66.6
MS.gene73573.t1 AT4G23180 37.008 127 69 7 340 461 512 632 3.18e-11 66.2
MS.gene73573.t1 AT4G21390 33.088 136 77 4 340 469 693 820 5.11e-11 65.5
MS.gene73573.t1 AT5G55830 30.657 137 81 5 340 471 531 658 5.82e-11 65.5
MS.gene73573.t1 AT1G61480 33.594 128 78 4 209 333 420 543 6.17e-11 65.5
MS.gene73573.t1 AT4G23320 35.200 125 75 3 340 461 347 468 7.71e-11 64.7
MS.gene73573.t1 AT4G23320 35.200 125 75 3 340 461 347 468 7.71e-11 64.7
MS.gene73573.t1 AT4G23320 35.200 125 75 3 340 461 368 489 8.65e-11 64.7
MS.gene73573.t1 AT4G28670 35.570 149 85 5 323 465 481 624 9.03e-11 64.7

Find 103 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACATTGTTATCATTCT+TGG 0.186206 6.4:+57652832 None:intergenic
CCTATACCTTGTTTAGTTGC+TGG 0.284808 6.4:+57655626 None:intergenic
GAATGACTATTGTGGGTTTA+TGG 0.290976 6.4:-57651998 MS.gene73573:CDS
CATCAACAATTCTTACTGTT+TGG 0.299184 6.4:+57654913 None:intergenic
ATTATAAAGAAAGTCATTAT+AGG 0.313313 6.4:-57653110 MS.gene73573:intron
AAATGTCTATTCCACACTTC+TGG 0.331819 6.4:+57652224 None:intergenic
AAGTCTGATGTTTATAGTTA+TGG 0.337910 6.4:-57652185 MS.gene73573:CDS
TTTCAACTTCTTGACACATC+TGG 0.344315 6.4:-57654852 MS.gene73573:CDS
TTGTCATGGCCAATCAAATA+TGG 0.348268 6.4:-57655542 MS.gene73573:CDS
GTAAGATTTGATAAAGGATT+AGG 0.355582 6.4:+57653307 None:intergenic
AAATTCTTCACCGTTTCCTT+TGG 0.361382 6.4:+57652640 None:intergenic
CAATACGACAGGGAAAGTTT+TGG 0.361425 6.4:-57652862 MS.gene73573:CDS
TTCCACATTGGGTATACAAT+AGG 0.363248 6.4:-57652088 MS.gene73573:CDS
GTTGCCGAATTCCCACCATC+TGG 0.379706 6.4:+57654963 None:intergenic
TGTTGAGTAAGATTTGATAA+AGG 0.380202 6.4:+57653301 None:intergenic
TGGAGGCCTTGACTTGGATA+TGG 0.388623 6.4:-57654880 MS.gene73573:CDS
AAACCCAGATGGTGGGAATT+CGG 0.400116 6.4:-57654967 MS.gene73573:CDS
GATGGTGTTGGTGCTGGTGT+TGG 0.400481 6.4:+57653346 None:intergenic
GAAAATGACAAACTCTTTCA+AGG 0.400569 6.4:-57652750 MS.gene73573:CDS
GGAGATGAATGTAATGGTTT+TGG 0.401879 6.4:+57651888 None:intergenic
TGTGGACCTGTTGGTCCTGT+TGG 0.420244 6.4:-57655506 MS.gene73573:CDS
CCAGCAACTAAACAAGGTAT+AGG 0.424056 6.4:-57655626 MS.gene73573:CDS
TAGTTATGGAATGATGTTGC+TGG 0.425175 6.4:-57652171 MS.gene73573:CDS
GCTGGTGATGGTGTTGGTGC+TGG 0.426824 6.4:+57653340 None:intergenic
TGGAATGATGTTGCTGGAAA+TGG 0.428726 6.4:-57652165 MS.gene73573:CDS
AGATAATGTAGTTGATCTAA+TGG 0.431533 6.4:+57653369 None:intergenic
TTCAACTTCTTGACACATCT+GGG 0.435899 6.4:-57654851 MS.gene73573:CDS
AACTCTTTCAAGGTTAAACT+TGG 0.436900 6.4:-57652740 MS.gene73573:CDS
AGGACCAACAGGTCCACAAA+AGG 0.444014 6.4:+57655511 None:intergenic
CAAATTCATCGTGCTACAAC+TGG 0.444450 6.4:-57653280 MS.gene73573:intron
GCAGCCCAGCCATATTTGAT+TGG 0.447984 6.4:+57655533 None:intergenic
TACAAAGGAAAGTTATTCAA+TGG 0.452813 6.4:-57652695 MS.gene73573:CDS
TGAGATATACTTTCCACATT+GGG 0.458771 6.4:-57652099 MS.gene73573:CDS
CTTGGTGGATTATGAATTTG+TGG 0.459134 6.4:-57654805 MS.gene73573:CDS
TCTGAGACCTGATGGAGTTA+TGG 0.459354 6.4:-57652048 MS.gene73573:CDS
CCACAAGCAGATTTGCCAAC+AGG 0.460460 6.4:+57655491 None:intergenic
TTGCAGGTAGTCACTCTAAC+GGG 0.473575 6.4:-57653136 MS.gene73573:intron
GATTTGCCAACAGGACCAAC+AGG 0.475075 6.4:+57655500 None:intergenic
AACAATTCTTACTGTTTGGA+TGG 0.477810 6.4:+57654917 None:intergenic
GCAAGGAGAATGACTATTGT+GGG 0.478707 6.4:-57652005 MS.gene73573:CDS
ATTCTTACTGTTTGGATGGT+CGG 0.479207 6.4:+57654921 None:intergenic
AGAAGTTAATATGAATTCAC+TGG 0.482850 6.4:-57651919 MS.gene73573:CDS
TGCTCAAGGTTACCTCTTGG+TGG 0.484708 6.4:-57654820 MS.gene73573:CDS
CATGGCCAATCAAATATGGC+TGG 0.485031 6.4:-57655538 MS.gene73573:CDS
TCTGTATCCATAACTCCATC+AGG 0.488805 6.4:+57652041 None:intergenic
AAGCAAGTCATCAATACGAC+AGG 0.496211 6.4:-57652873 MS.gene73573:CDS
TCAGATCAAAGAGGGACAAT+GGG 0.505385 6.4:-57652257 MS.gene73573:CDS
AAGTGGAACTTGAACACATC+AGG 0.506203 6.4:-57655599 MS.gene73573:CDS
TTGCCGAATTCCCACCATCT+GGG 0.513631 6.4:+57654964 None:intergenic
GAAGTGTGGAATAGACATTT+CGG 0.513936 6.4:-57652221 MS.gene73573:CDS
CTTCTTGACACATCTGGGGA+TGG 0.516216 6.4:-57654846 MS.gene73573:CDS
TAGCAATGGAGGCCTTGACT+TGG 0.524595 6.4:-57654886 MS.gene73573:CDS
TTCAAGGTTAAACTTGGTCA+AGG 0.527315 6.4:-57652734 MS.gene73573:CDS
TCAAGGTTAAACTTGGTCAA+GGG 0.528873 6.4:-57652733 MS.gene73573:CDS
TTGAATTCATCCAAAGGAAA+CGG 0.529215 6.4:-57652650 MS.gene73573:CDS
GTGAGATATACTTTCCACAT+TGG 0.531157 6.4:-57652100 MS.gene73573:CDS
GGCACTAATCTGAGACCTGA+TGG 0.535587 6.4:-57652056 MS.gene73573:CDS
GTCAGATCAAAGAGGGACAA+TGG 0.544446 6.4:-57652258 MS.gene73573:CDS
CGCAAGGAGAATGACTATTG+TGG 0.549142 6.4:-57652006 MS.gene73573:CDS
AGACTCTGATATTGATCTAG+TGG 0.549611 6.4:+57651866 None:intergenic
TTCTTGACACATCTGGGGAT+GGG 0.555946 6.4:-57654845 MS.gene73573:CDS
GACTCTGATATTGATCTAGT+GGG 0.568793 6.4:+57651867 None:intergenic
GTATACAATAGGCTTGAGCT+TGG 0.571113 6.4:-57652077 MS.gene73573:CDS
GAATGCTCAAGGTTACCTCT+TGG 0.572118 6.4:-57654823 MS.gene73573:CDS
GTGTTATGTGCATCTCAAGA+TGG 0.576218 6.4:-57655575 MS.gene73573:CDS
GGATTAGGCGATAAGAATGC+TGG 0.576404 6.4:+57653322 None:intergenic
CGGTGAAGAATTTATTAACG+AGG 0.576914 6.4:-57652630 MS.gene73573:intron
CAAGGTTAAACTTGGTCAAG+GGG 0.583035 6.4:-57652732 MS.gene73573:CDS
ATGGGAACAAATCTTTGTCA+TGG 0.588792 6.4:-57655556 MS.gene73573:CDS
TTTCGATGTCAGATCAAAGA+GGG 0.589974 6.4:-57652265 MS.gene73573:CDS
TTTGCAGGTAGTCACTCTAA+CGG 0.593441 6.4:-57653137 MS.gene73573:intron
TCTGGGGATGGGAATGCTCA+AGG 0.594869 6.4:-57654834 MS.gene73573:CDS
TGCTGGAAATGGTTGGAGGG+AGG 0.594950 6.4:-57652154 MS.gene73573:CDS
AATTCTCCAGCAACTAAACA+AGG 0.601587 6.4:-57655632 MS.gene73573:CDS
TGTTATGTGCATCTCAAGAT+GGG 0.602561 6.4:-57655574 MS.gene73573:CDS
TGTTGCTGGAAATGGTTGGA+GGG 0.602827 6.4:-57652157 MS.gene73573:CDS
CAGATGAAGATGAGATCGCA+AGG 0.607532 6.4:-57652022 MS.gene73573:CDS
AAGAATGCTGGTGATGGTGT+TGG 0.608713 6.4:+57653334 None:intergenic
ATTGTTGATGAGTGTAGCAA+TGG 0.608716 6.4:-57654900 MS.gene73573:CDS
AGCCTATTGTATACCCAATG+TGG 0.611017 6.4:+57652086 None:intergenic
TCAACTTCTTGACACATCTG+GGG 0.611129 6.4:-57654850 MS.gene73573:CDS
ATGTTGCTGGAAATGGTTGG+AGG 0.615120 6.4:-57652158 MS.gene73573:CDS
TAGGTGACAAACCCAGATGG+TGG 0.615120 6.4:-57654975 MS.gene73573:CDS
AGACATCCATATCCAAGTCA+AGG 0.615419 6.4:+57654874 None:intergenic
AAGATATTGAATTCATCCAA+AGG 0.617351 6.4:-57652656 MS.gene73573:CDS
AACAAGGTATAGGAAACAAG+TGG 0.619576 6.4:-57655616 MS.gene73573:CDS
CCTGTTGGCAAATCTGCTTG+TGG 0.620946 6.4:-57655491 MS.gene73573:CDS
GGCGATAAGAATGCTGGTGA+TGG 0.623252 6.4:+57653328 None:intergenic
GATATGTAGCTCCAGAAGTG+TGG 0.626015 6.4:-57652235 MS.gene73573:CDS
ATTTCGATGTCAGATCAAAG+AGG 0.627589 6.4:-57652266 MS.gene73573:CDS
ATTGTTTGCACTTTGAGTTG+AGG 0.629411 6.4:+57655679 None:intergenic
CAAATTCATAATCCACCAAG+AGG 0.641302 6.4:+57654808 None:intergenic
ATATCAACACCAAATCCAGA+AGG 0.643431 6.4:+57655720 None:intergenic
AGCAAGTCATCAATACGACA+GGG 0.652144 6.4:-57652872 MS.gene73573:CDS
ATGATGTTGCTGGAAATGGT+TGG 0.652420 6.4:-57652161 MS.gene73573:CDS
ATGGCCAATCAAATATGGCT+GGG 0.654256 6.4:-57655537 MS.gene73573:CDS
TTGTAGGTGACAAACCCAGA+TGG 0.657325 6.4:-57654978 MS.gene73573:intron
GTTGATGAGTGTAGCAATGG+AGG 0.657434 6.4:-57654897 MS.gene73573:CDS
AGGTGACAAACCCAGATGGT+GGG 0.657460 6.4:-57654974 MS.gene73573:CDS
AAGGTTAAACTTGGTCAAGG+GGG 0.670607 6.4:-57652731 MS.gene73573:CDS
CTAGTGGGAGATGAATGTAA+TGG 0.694446 6.4:+57651882 None:intergenic
GTGTGGAATAGACATTTCGG+AGG 0.714471 6.4:-57652218 MS.gene73573:CDS
GATTATGAATTTGTGGACCG+TGG 0.721334 6.4:-57654798 MS.gene73573:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCATTCAATAAAAAATAA+TGG - chr6.4:57653205-57653224 MS.gene73573:intron 10.0%
!!! AAAATTACAAATTTTCAAAT+GGG - chr6.4:57653151-57653170 MS.gene73573:intron 10.0%
!!! ATTATTTAAAATTTTGTGAT+TGG - chr6.4:57654157-57654176 MS.gene73573:intron 10.0%
!! AAAACTAAAACATAAGAATT+TGG + chr6.4:57653799-57653818 None:intergenic 15.0%
!! AAACTAAAACATAAGAATTT+GGG + chr6.4:57653798-57653817 None:intergenic 15.0%
!! ATAGTTGTATAATATTATGA+TGG + chr6.4:57653528-57653547 None:intergenic 15.0%
!! ATATATGAATTTATCTCTAA+TGG - chr6.4:57655070-57655089 MS.gene73573:intron 15.0%
!! ATCATTAATCTACTTATAAT+AGG + chr6.4:57652847-57652866 None:intergenic 15.0%
!! ATTATAAAGAAAGTCATTAT+AGG - chr6.4:57654487-57654506 MS.gene73573:intron 15.0%
!! GACAAATTTATTTACAATAA+GGG - chr6.4:57655100-57655119 MS.gene73573:intron 15.0%
!! GATAAAATGAATAAAATCTA+TGG + chr6.4:57652591-57652610 None:intergenic 15.0%
!! GTGAATTTAAAAGTTAAATT+CGG + chr6.4:57653293-57653312 None:intergenic 15.0%
!! TACAAAATTTATGATAAAAG+AGG + chr6.4:57654359-57654378 None:intergenic 15.0%
!! TCATTAATCTACTTATAATA+GGG + chr6.4:57652846-57652865 None:intergenic 15.0%
!! TGAAATTTATCTTGTAAATT+TGG - chr6.4:57654093-57654112 MS.gene73573:intron 15.0%
!! TGACAAATTTATTTACAATA+AGG - chr6.4:57655099-57655118 MS.gene73573:intron 15.0%
!! TTAGAAAAACAAGATTAAAT+AGG + chr6.4:57653616-57653635 None:intergenic 15.0%
!!! AATAAATTTTCCTTAAAAAC+AGG - chr6.4:57654644-57654663 MS.gene73573:intron 15.0%
!!! AATATTTTTTTTTTTGAAGG+AGG + chr6.4:57653955-57653974 None:intergenic 15.0%
!!! AGGAATATTTTTTTTTTTGA+AGG + chr6.4:57653958-57653977 None:intergenic 15.0%
!!! CAAAATTACAAATTTTCAAA+TGG - chr6.4:57653150-57653169 MS.gene73573:intron 15.0%
!!! TATGTAAAAACAATTTTCAT+TGG + chr6.4:57653738-57653757 None:intergenic 15.0%
!!! TTATCTAAAATAATGTTATG+TGG + chr6.4:57655247-57655266 None:intergenic 15.0%
!!! TTCTTTGAAAAAAGTTTTAT+AGG + chr6.4:57653763-57653782 None:intergenic 15.0%
!! AAATATAGTCAAAGTAAGTT+AGG - chr6.4:57653126-57653145 MS.gene73573:CDS 20.0%
!! AAATTTATGATAAAAGAGGT+AGG + chr6.4:57654355-57654374 None:intergenic 20.0%
!! AACTAATATTTGAACTTTAC+GGG - chr6.4:57652429-57652448 MS.gene73573:intron 20.0%
!! AATTTATGATAAAAGAGGTA+GGG + chr6.4:57654354-57654373 None:intergenic 20.0%
!! AATTTGTATCAAATTGCAAA+AGG - chr6.4:57655154-57655173 MS.gene73573:intron 20.0%
!! ACAAGATTAAATAGGATAAA+AGG + chr6.4:57653608-57653627 None:intergenic 20.0%
!! ATTTATTAATTACGTGATGA+TGG + chr6.4:57654631-57654650 None:intergenic 20.0%
!! ATTTGTATCAAATTGCAAAA+GGG - chr6.4:57655155-57655174 MS.gene73573:intron 20.0%
!! CAACTAATATTTGAACTTTA+CGG - chr6.4:57652428-57652447 MS.gene73573:intron 20.0%
!! CAATAAAAAATAATGGTAGT+AGG - chr6.4:57653212-57653231 MS.gene73573:intron 20.0%
!! TGAATAAAATCTATGGATAT+TGG + chr6.4:57652584-57652603 None:intergenic 20.0%
!!! AAACAATTTTCATTGGTTAT+TGG + chr6.4:57653731-57653750 None:intergenic 20.0%
!!! AAAGATTAAACTTTTGTTCA+AGG - chr6.4:57653419-57653438 MS.gene73573:intron 20.0%
!!! AAGATTAAACTTTTGTTCAA+GGG - chr6.4:57653420-57653439 MS.gene73573:intron 20.0%
!!! ATGAACTGTATTTTTTTCTT+TGG - chr6.4:57652268-57652287 MS.gene73573:CDS 20.0%
!!! ATTTAACTTTTAAATTCACG+TGG - chr6.4:57653294-57653313 MS.gene73573:CDS 20.0%
!!! GTCTTTTTTGCTTATATTTT+GGG + chr6.4:57653583-57653602 None:intergenic 20.0%
!!! TGTCTTTTTTGCTTATATTT+TGG + chr6.4:57653584-57653603 None:intergenic 20.0%
!!! TTAATTTTTGTCAAGTAGTT+TGG - chr6.4:57652176-57652195 MS.gene73573:CDS 20.0%
!!! TTTTTGTTTATAATTTGGGA+CGG - chr6.4:57653840-57653859 MS.gene73573:intron 20.0%
! AAGATATTGAATTCATCCAA+AGG - chr6.4:57654941-57654960 MS.gene73573:CDS 25.0%
! AAGTCTGATGTTTATAGTTA+TGG - chr6.4:57655412-57655431 MS.gene73573:intron 25.0%
! AGAAAAAAATACAGTTCATG+TGG + chr6.4:57652267-57652286 None:intergenic 25.0%
! AGAAGTTAATATGAATTCAC+TGG - chr6.4:57655678-57655697 MS.gene73573:CDS 25.0%
! AGATAATGTAGTTGATCTAA+TGG + chr6.4:57654231-57654250 None:intergenic 25.0%
! CATTTAGATTCACTGTATAT+TGG - chr6.4:57653393-57653412 MS.gene73573:CDS 25.0%
! GTAAGATTTGATAAAGGATT+AGG + chr6.4:57654293-57654312 None:intergenic 25.0%
! TACAAAGGAAAGTTATTCAA+TGG - chr6.4:57654902-57654921 MS.gene73573:CDS 25.0%
! TCAACTGTGTCAAATATTAA+AGG + chr6.4:57652957-57652976 None:intergenic 25.0%
! TCCATGTCAAAGAATTATTT+AGG + chr6.4:57653978-57653997 None:intergenic 25.0%
! TCCTAAATAATTCTTTGACA+TGG - chr6.4:57653974-57653993 MS.gene73573:intron 25.0%
! TGTTGAGTAAGATTTGATAA+AGG + chr6.4:57654299-57654318 None:intergenic 25.0%
! TTAAGCTCAAAATTATGCAT+TGG + chr6.4:57652994-57653013 None:intergenic 25.0%
! TTCAAAACAAAATCCAAGAA+GGG + chr6.4:57655032-57655051 None:intergenic 25.0%
! TTCAACATTGTTATCATTCT+TGG + chr6.4:57654768-57654787 None:intergenic 25.0%
!! CTGATATAATTTTCTTAGCT+AGG + chr6.4:57653478-57653497 None:intergenic 25.0%
!! TTTCATTGGTTATTGGTTAT+GGG + chr6.4:57653724-57653743 None:intergenic 25.0%
!!! GAAATAATGCTCTGTTTTTT+TGG + chr6.4:57655316-57655335 None:intergenic 25.0%
!!! TTTTCATTGGTTATTGGTTA+TGG + chr6.4:57653725-57653744 None:intergenic 25.0%
AAATCCACACTCTTAACTTA+AGG - chr6.4:57652455-57652474 MS.gene73573:intron 30.0%
AACAATTCTTACTGTTTGGA+TGG + chr6.4:57652683-57652702 None:intergenic 30.0%
AACTCTTTCAAGGTTAAACT+TGG - chr6.4:57654857-57654876 MS.gene73573:CDS 30.0%
AACTTCACTTTGATCATTAC+TGG - chr6.4:57654515-57654534 MS.gene73573:intron 30.0%
ATTTCCTTAAGTTAAGAGTG+TGG + chr6.4:57652462-57652481 None:intergenic 30.0%
CATCAACAATTCTTACTGTT+TGG + chr6.4:57652687-57652706 None:intergenic 30.0%
CTGTGTCAAATATTAAAGGA+CGG + chr6.4:57652953-57652972 None:intergenic 30.0%
CTTCAAAACAAAATCCAAGA+AGG + chr6.4:57655033-57655052 None:intergenic 30.0%
GAAAATGACAAACTCTTTCA+AGG - chr6.4:57654847-57654866 MS.gene73573:CDS 30.0%
GGTAACAATATTAACATGTG+AGG + chr6.4:57655011-57655030 None:intergenic 30.0%
GTCAATTCACATGTCTAAAT+AGG - chr6.4:57654588-57654607 MS.gene73573:intron 30.0%
GTTAATATTGTTACCCTTCT+TGG - chr6.4:57655016-57655035 MS.gene73573:intron 30.0%
TGAGATATACTTTCCACATT+GGG - chr6.4:57655498-57655517 MS.gene73573:CDS 30.0%
TTGAATTCATCCAAAGGAAA+CGG - chr6.4:57654947-57654966 MS.gene73573:CDS 30.0%
TTGCATTCTAAATGTGTTAC+AGG + chr6.4:57652356-57652375 None:intergenic 30.0%
! AGTCCAAAATCTGAAATCTT+TGG + chr6.4:57655280-57655299 None:intergenic 30.0%
! ATTTTATCACCCCTAATTGT+AGG - chr6.4:57652603-57652622 MS.gene73573:intron 30.0%
! CAACCTGAAAAGACATTTTA+GGG + chr6.4:57652238-57652257 None:intergenic 30.0%
! GATATTTTGTGTTCTAGCAT+TGG - chr6.4:57651895-57651914 MS.gene73573:CDS 30.0%
! TGTCCAAAGATTTCAGATTT+TGG - chr6.4:57655274-57655293 MS.gene73573:intron 30.0%
!! CACGTAGTATTTATCGATTT+CGG - chr6.4:57652517-57652536 MS.gene73573:intron 30.0%
!! GAAGCATTTTTAAGAGATCA+TGG - chr6.4:57654785-57654804 MS.gene73573:intron 30.0%
!!! ACTTACAACACCTGTTTTTA+AGG + chr6.4:57654657-57654676 None:intergenic 30.0%
!!! CTTCTTGGATTTTGTTTTGA+AGG - chr6.4:57655031-57655050 MS.gene73573:intron 30.0%
!!! GAGGAACAATTTTTTTAGCT+AGG + chr6.4:57653936-57653955 None:intergenic 30.0%
AAATGTCTATTCCACACTTC+TGG + chr6.4:57655376-57655395 None:intergenic 35.0%
AAATTCTTCACCGTTTCCTT+TGG + chr6.4:57654960-57654979 None:intergenic 35.0%
AACAAGGTATAGGAAACAAG+TGG - chr6.4:57651981-57652000 MS.gene73573:CDS 35.0%
AATTCTCCAGCAACTAAACA+AGG - chr6.4:57651965-57651984 MS.gene73573:CDS 35.0%
AGACTCTGATATTGATCTAG+TGG + chr6.4:57655734-57655753 None:intergenic 35.0%
AGAGATAAGTAGTAGTACCA+CGG + chr6.4:57652819-57652838 None:intergenic 35.0%
AGATTCATCATCATTCACTC+AGG + chr6.4:57652543-57652562 None:intergenic 35.0%
ATATCAACACCAAATCCAGA+AGG + chr6.4:57651880-57651899 None:intergenic 35.0%
ATGGGAACAAATCTTTGTCA+TGG - chr6.4:57652041-57652060 MS.gene73573:CDS 35.0%
ATTCTTACTGTTTGGATGGT+CGG + chr6.4:57652679-57652698 None:intergenic 35.0%
ATTTCGATGTCAGATCAAAG+AGG - chr6.4:57655331-57655350 MS.gene73573:intron 35.0%
CAAATTCATAATCCACCAAG+AGG + chr6.4:57652792-57652811 None:intergenic 35.0%
CGGTGAAGAATTTATTAACG+AGG - chr6.4:57654967-57654986 MS.gene73573:CDS 35.0%
GAAGTGTGGAATAGACATTT+CGG - chr6.4:57655376-57655395 MS.gene73573:intron 35.0%
GAATGACTATTGTGGGTTTA+TGG - chr6.4:57655599-57655618 MS.gene73573:CDS 35.0%
GACTCTGATATTGATCTAGT+GGG + chr6.4:57655733-57655752 None:intergenic 35.0%
GTGAGATATACTTTCCACAT+TGG - chr6.4:57655497-57655516 MS.gene73573:CDS 35.0%
TAGTTATGGAATGATGTTGC+TGG - chr6.4:57655426-57655445 MS.gene73573:intron 35.0%
TCAAATGGGTCATCTATTAC+AGG - chr6.4:57653165-57653184 MS.gene73573:intron 35.0%
TCAAGGTTAAACTTGGTCAA+GGG - chr6.4:57654864-57654883 MS.gene73573:CDS 35.0%
TGTCAAATATTAAAGGACGG+AGG + chr6.4:57652950-57652969 None:intergenic 35.0%
TGTTATGTGCATCTCAAGAT+GGG - chr6.4:57652023-57652042 MS.gene73573:CDS 35.0%
TTATGCTTACGATTGTTTGC+AGG - chr6.4:57654445-57654464 MS.gene73573:intron 35.0%
TTCAACTTCTTGACACATCT+GGG - chr6.4:57652746-57652765 MS.gene73573:CDS 35.0%
TTCAAGGTTAAACTTGGTCA+AGG - chr6.4:57654863-57654882 MS.gene73573:CDS 35.0%
TTCCACATTGGGTATACAAT+AGG - chr6.4:57655509-57655528 MS.gene73573:CDS 35.0%
TTGTCATGGCCAATCAAATA+TGG - chr6.4:57652055-57652074 MS.gene73573:CDS 35.0%
TTTCAACTTCTTGACACATC+TGG - chr6.4:57652745-57652764 MS.gene73573:CDS 35.0%
TTTCGATGTCAGATCAAAGA+GGG - chr6.4:57655332-57655351 MS.gene73573:intron 35.0%
! ATTGTTGATGAGTGTAGCAA+TGG - chr6.4:57652697-57652716 MS.gene73573:CDS 35.0%
! GAATGATGATGAATCTCTAG+TGG - chr6.4:57652547-57652566 MS.gene73573:intron 35.0%
! GCAACCTGAAAAGACATTTT+AGG + chr6.4:57652239-57652258 None:intergenic 35.0%
! GCAATTTTTCCTTCTGGATT+TGG - chr6.4:57651868-57651887 MS.gene73573:CDS 35.0%
! GGAGATGAATGTAATGGTTT+TGG + chr6.4:57655712-57655731 None:intergenic 35.0%
! GTTGAAGCAATTTTTCCTTC+TGG - chr6.4:57651862-57651881 MS.gene73573:CDS 35.0%
! TGTTTATAATTTGGGACGGA+TGG - chr6.4:57653844-57653863 MS.gene73573:intron 35.0%
! TTGTGATTGGTTGCTTTGAA+AGG - chr6.4:57654170-57654189 MS.gene73573:intron 35.0%
!! ATTGTTTGCACTTTGAGTTG+AGG + chr6.4:57651921-57651940 None:intergenic 35.0%
!! CTTGGTGGATTATGAATTTG+TGG - chr6.4:57652792-57652811 MS.gene73573:CDS 35.0%
!! TTGACATTGACTTAGGAGTT+AGG - chr6.4:57653364-57653383 MS.gene73573:CDS 35.0%
!!! GATGAATGTAATGGTTTTGG+TGG + chr6.4:57655709-57655728 None:intergenic 35.0%
AAGCAAGTCATCAATACGAC+AGG - chr6.4:57654724-57654743 MS.gene73573:intron 40.0%
AAGGTTAAACTTGGTCAAGG+GGG - chr6.4:57654866-57654885 MS.gene73573:CDS 40.0%
AAGTGGAACTTGAACACATC+AGG - chr6.4:57651998-57652017 MS.gene73573:CDS 40.0%
AGACAATTGCATCTTTGAGC+TGG - chr6.4:57655128-57655147 MS.gene73573:intron 40.0%
AGACATCCATATCCAAGTCA+AGG + chr6.4:57652726-57652745 None:intergenic 40.0%
AGCAAGTCATCAATACGACA+GGG - chr6.4:57654725-57654744 MS.gene73573:intron 40.0%
AGCCTATTGTATACCCAATG+TGG + chr6.4:57655514-57655533 None:intergenic 40.0%
ATGATGTTGCTGGAAATGGT+TGG - chr6.4:57655436-57655455 MS.gene73573:intron 40.0%
ATGGCCAATCAAATATGGCT+GGG - chr6.4:57652060-57652079 MS.gene73573:CDS 40.0%
ATGGGTCATCTATTACAGGA+CGG - chr6.4:57653169-57653188 MS.gene73573:intron 40.0%
CAAATTCATCGTGCTACAAC+TGG - chr6.4:57654317-57654336 MS.gene73573:intron 40.0%
CAAGGTTAAACTTGGTCAAG+GGG - chr6.4:57654865-57654884 MS.gene73573:CDS 40.0%
CCAGCAACTAAACAAGGTAT+AGG - chr6.4:57651971-57651990 MS.gene73573:CDS 40.0%
CTAGTGGGAGATGAATGTAA+TGG + chr6.4:57655718-57655737 None:intergenic 40.0%
CTCAAAGATGCAATTGTCTC+AGG + chr6.4:57655127-57655146 None:intergenic 40.0%
GACAATTGCATCTTTGAGCT+GGG - chr6.4:57655129-57655148 MS.gene73573:intron 40.0%
GATTATGAATTTGTGGACCG+TGG - chr6.4:57652799-57652818 MS.gene73573:CDS 40.0%
GCAAGGAGAATGACTATTGT+GGG - chr6.4:57655592-57655611 MS.gene73573:CDS 40.0%
GCTAGGTGAAAAAGAGTAAC+TGG + chr6.4:57653461-57653480 None:intergenic 40.0%
GGGTTTGTCACCTACAATTA+GGG + chr6.4:57652616-57652635 None:intergenic 40.0%
GGTTTGTCACCTACAATTAG+GGG + chr6.4:57652615-57652634 None:intergenic 40.0%
GTATACAATAGGCTTGAGCT+TGG - chr6.4:57655520-57655539 MS.gene73573:CDS 40.0%
GTGTTATGTGCATCTCAAGA+TGG - chr6.4:57652022-57652041 MS.gene73573:CDS 40.0%
TCAACTTCTTGACACATCTG+GGG - chr6.4:57652747-57652766 MS.gene73573:CDS 40.0%
TCAGATCAAAGAGGGACAAT+GGG - chr6.4:57655340-57655359 MS.gene73573:intron 40.0%
TCGTAAGCATAAAGAGCAAG+AGG + chr6.4:57654437-57654456 None:intergenic 40.0%
TCTGTATCCATAACTCCATC+AGG + chr6.4:57655559-57655578 None:intergenic 40.0%
TGGAATGATGTTGCTGGAAA+TGG - chr6.4:57655432-57655451 MS.gene73573:intron 40.0%
TGGGTTTGTCACCTACAATT+AGG + chr6.4:57652617-57652636 None:intergenic 40.0%
TTTGCAGGTAGTCACTCTAA+CGG - chr6.4:57654460-57654479 MS.gene73573:intron 40.0%
! ATGCATTGGCATGCGTAATA+AGG + chr6.4:57652980-57652999 None:intergenic 40.0%
! CAATACGACAGGGAAAGTTT+TGG - chr6.4:57654735-57654754 MS.gene73573:intron 40.0%
! CCTATACCTTGTTTAGTTGC+TGG + chr6.4:57651974-57651993 None:intergenic 40.0%
! TGAAGCATCCGACAAATAGT+GGG + chr6.4:57653322-57653341 None:intergenic 40.0%
!! TGACTCGTTGACATTGACTT+AGG - chr6.4:57653357-57653376 MS.gene73573:CDS 40.0%
!!! GGTTTTGGTGTTGTGTACAA+AGG - chr6.4:57654887-57654906 MS.gene73573:CDS 40.0%
!!! TAGTTTTGTGTGAAACGAGC+AGG - chr6.4:57652907-57652926 MS.gene73573:CDS 40.0%
ACGTGGTACCCACTATTTGT+CGG - chr6.4:57653311-57653330 MS.gene73573:CDS 45.0%
AGTAACTGGACCATGCAAGA+GGG + chr6.4:57653447-57653466 None:intergenic 45.0%
ATGTTGCTGGAAATGGTTGG+AGG - chr6.4:57655439-57655458 MS.gene73573:intron 45.0%
ATTGCAAAAGGGATAGCTCG+TGG - chr6.4:57655166-57655185 MS.gene73573:intron 45.0%
CAGATGAAGATGAGATCGCA+AGG - chr6.4:57655575-57655594 MS.gene73573:CDS 45.0%
CATGGCCAATCAAATATGGC+TGG - chr6.4:57652059-57652078 MS.gene73573:CDS 45.0%
CGCAAGGAGAATGACTATTG+TGG - chr6.4:57655591-57655610 MS.gene73573:CDS 45.0%
GAATGCTCAAGGTTACCTCT+TGG - chr6.4:57652774-57652793 MS.gene73573:CDS 45.0%
GATATGTAGCTCCAGAAGTG+TGG - chr6.4:57655362-57655381 MS.gene73573:intron 45.0%
GCATAAAGAGCAAGAGGAGT+TGG + chr6.4:57654431-57654450 None:intergenic 45.0%
GGATTAGGCGATAAGAATGC+TGG + chr6.4:57654278-57654297 None:intergenic 45.0%
GTCAGATCAAAGAGGGACAA+TGG - chr6.4:57655339-57655358 MS.gene73573:intron 45.0%
GTGTGGAATAGACATTTCGG+AGG - chr6.4:57655379-57655398 MS.gene73573:intron 45.0%
TGTTGCTGGAAATGGTTGGA+GGG - chr6.4:57655440-57655459 MS.gene73573:intron 45.0%
TTCTTGACACATCTGGGGAT+GGG - chr6.4:57652752-57652771 MS.gene73573:CDS 45.0%
TTGCAAAAGGGATAGCTCGT+GGG - chr6.4:57655167-57655186 MS.gene73573:intron 45.0%
TTGCAGGTAGTCACTCTAAC+GGG - chr6.4:57654461-57654480 MS.gene73573:intron 45.0%
TTGTAGGTGACAAACCCAGA+TGG - chr6.4:57652619-57652638 MS.gene73573:intron 45.0%
! AAACTTGGTCAAGGGGGTTT+TGG - chr6.4:57654872-57654891 MS.gene73573:CDS 45.0%
! GCGCCCTAAAATGTCTTTTC+AGG - chr6.4:57652232-57652251 MS.gene73573:CDS 45.0%
! GTGAAGCATCCGACAAATAG+TGG + chr6.4:57653323-57653342 None:intergenic 45.0%
! GTTGATGAGTGTAGCAATGG+AGG - chr6.4:57652700-57652719 MS.gene73573:CDS 45.0%
! TCTGAGACCTGATGGAGTTA+TGG - chr6.4:57655549-57655568 MS.gene73573:CDS 45.0%
!! AAACCCAGATGGTGGGAATT+CGG - chr6.4:57652630-57652649 MS.gene73573:intron 45.0%
!! AAGAATGCTGGTGATGGTGT+TGG + chr6.4:57654266-57654285 None:intergenic 45.0%
!!! AATTTTTTTTAACTATTTAA+AGG - chr6.4:57652311-57652330 MS.gene73573:intron 5.0%
!!! ATTTTTTTTAACTATTTAAA+GGG - chr6.4:57652312-57652331 MS.gene73573:intron 5.0%
!!! TATTTTTTTGTTTATAATTT+GGG - chr6.4:57653836-57653855 MS.gene73573:intron 5.0%
!!! TTATTTTTTTGTTTATAATT+TGG - chr6.4:57653835-57653854 MS.gene73573:intron 5.0%
AGGACCAACAGGTCCACAAA+AGG + chr6.4:57652089-57652108 None:intergenic 50.0%
AGGTGACAAACCCAGATGGT+GGG - chr6.4:57652623-57652642 MS.gene73573:intron 50.0%
CCACAAGCAGATTTGCCAAC+AGG + chr6.4:57652109-57652128 None:intergenic 50.0%
CCTGTTGGCAAATCTGCTTG+TGG - chr6.4:57652106-57652125 MS.gene73573:CDS 50.0%
CTTCTTGACACATCTGGGGA+TGG - chr6.4:57652751-57652770 MS.gene73573:CDS 50.0%
GAGTAACTGGACCATGCAAG+AGG + chr6.4:57653448-57653467 None:intergenic 50.0%
GATTTGCCAACAGGACCAAC+AGG + chr6.4:57652100-57652119 None:intergenic 50.0%
GCAGCCCAGCCATATTTGAT+TGG + chr6.4:57652067-57652086 None:intergenic 50.0%
GGCGATAAGAATGCTGGTGA+TGG + chr6.4:57654272-57654291 None:intergenic 50.0%
GGTCATCTATTACAGGACGG+AGG - chr6.4:57653172-57653191 MS.gene73573:intron 50.0%
TAGCAATGGAGGCCTTGACT+TGG - chr6.4:57652711-57652730 MS.gene73573:CDS 50.0%
TAGGTGACAAACCCAGATGG+TGG - chr6.4:57652622-57652641 MS.gene73573:intron 50.0%
TGCTCAAGGTTACCTCTTGG+TGG - chr6.4:57652777-57652796 MS.gene73573:CDS 50.0%
TTGCCGAATTCCCACCATCT+GGG + chr6.4:57652636-57652655 None:intergenic 50.0%
! GGCACTAATCTGAGACCTGA+TGG - chr6.4:57655541-57655560 MS.gene73573:CDS 50.0%
!! TGGAGGCCTTGACTTGGATA+TGG - chr6.4:57652717-57652736 MS.gene73573:CDS 50.0%
GGGCTCGAGTACTTGCATAG+AGG - chr6.4:57655187-57655206 MS.gene73573:intron 55.0%
GTTCAAGGGTCCCTCTTGCA+TGG - chr6.4:57653434-57653453 MS.gene73573:intron 55.0%
GTTGCCGAATTCCCACCATC+TGG + chr6.4:57652637-57652656 None:intergenic 55.0%
TCTGGGGATGGGAATGCTCA+AGG - chr6.4:57652763-57652782 MS.gene73573:CDS 55.0%
TGCTGGAAATGGTTGGAGGG+AGG - chr6.4:57655443-57655462 MS.gene73573:intron 55.0%
TGTGGACCTGTTGGTCCTGT+TGG - chr6.4:57652091-57652110 MS.gene73573:CDS 55.0%
! GCTGCCTTTTGTGGACCTGT+TGG - chr6.4:57652082-57652101 MS.gene73573:CDS 55.0%
! TATGGCTGGGCTGCCTTTTG+TGG - chr6.4:57652073-57652092 MS.gene73573:CDS 55.0%
!! GATGGTGTTGGTGCTGGTGT+TGG + chr6.4:57654254-57654273 None:intergenic 55.0%
!! GCTGGTGATGGTGTTGGTGC+TGG + chr6.4:57654260-57654279 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 57651860 57655759 57651860 ID=MS.gene73573
chr6.4 mRNA 57651860 57655759 57651860 ID=MS.gene73573.t1;Parent=MS.gene73573
chr6.4 exon 57655478 57655759 57655478 ID=MS.gene73573.t1.exon1;Parent=MS.gene73573.t1
chr6.4 CDS 57655478 57655759 57655478 ID=cds.MS.gene73573.t1;Parent=MS.gene73573.t1
chr6.4 exon 57654799 57654994 57654799 ID=MS.gene73573.t1.exon2;Parent=MS.gene73573.t1
chr6.4 CDS 57654799 57654994 57654799 ID=cds.MS.gene73573.t1;Parent=MS.gene73573.t1
chr6.4 exon 57653281 57653427 57653281 ID=MS.gene73573.t1.exon3;Parent=MS.gene73573.t1
chr6.4 CDS 57653281 57653427 57653281 ID=cds.MS.gene73573.t1;Parent=MS.gene73573.t1
chr6.4 exon 57653111 57653152 57653111 ID=MS.gene73573.t1.exon4;Parent=MS.gene73573.t1
chr6.4 CDS 57653111 57653152 57653111 ID=cds.MS.gene73573.t1;Parent=MS.gene73573.t1
chr6.4 exon 57652631 57652953 57652631 ID=MS.gene73573.t1.exon5;Parent=MS.gene73573.t1
chr6.4 CDS 57652631 57652953 57652631 ID=cds.MS.gene73573.t1;Parent=MS.gene73573.t1
chr6.4 exon 57651860 57652294 57651860 ID=MS.gene73573.t1.exon6;Parent=MS.gene73573.t1
chr6.4 CDS 57651860 57652294 57651860 ID=cds.MS.gene73573.t1;Parent=MS.gene73573.t1
Gene Sequence

>MS.gene73573

ATGTTGAAGCAATTTTTCCTTCTGGATTTGGTGTTGATATTTTGTGTTCTAGCATTGGCCTCAACTCAAAGTGCAAACAATGTGACTGCTACATATCAGTCTTTCAATTCTCCAGCAACTAAACAAGGTATAGGAAACAAGTGGAACTTGAACACATCAGGTGTGTTATGTGCATCTCAAGATGGGAACAAATCTTTGTCATGGCCAATCAAATATGGCTGGGCTGCCTTTTGTGGACCTGTTGGTCCTGTTGGCAAATCTGCTTGTGGCAAGTGCTTAAAAGTATGTATATGTATAATGTTTGCAGTTTACTTATTTAATTTTTGTCAAGTAGTTTGGTGTGAATCTCACACATTACGAGTTCAAATATTTGCGCCCTAAAATGTCTTTTCAGGTTGCAGCGTCCACATGAACTGTATTTTTTTCTTTGGAAGAAAGTTCTATAAAATACAATTTTTTTTAACTATTTAAAGGGTGACTTGAATCTATAAGACCTGTAACACATTTAGAATGCAAAAACAACTAGTATTTGATTATATTTTCTATTTTTCGAGTCAACATTAGAAAACAACTAATATTTGAACTTTACGGGTTTAAATCCACACTCTTAACTTAAGGAAATCATTGTAACAAAAATATTTACAATATTGTTAGTTTCACGTAGTATTTATCGATTTCGGCCTGAGTGAATGATGATGAATCTCTAGTGGTTCAATTCAAACCAATATCCATAGATTTTATTCATTTTATCACCCCTAATTGTAGGTGACAAACCCAGATGGTGGGAATTCGGCAACGCAACAACAATCAATAACTCCGACCATCCAAACAGTAAGAATTGTTGATGAGTGTAGCAATGGAGGCCTTGACTTGGATATGGATGTCTTTCAACTTCTTGACACATCTGGGGATGGGAATGCTCAAGGTTACCTCTTGGTGGATTATGAATTTGTGGACCGTGGTACTACTACTTATCTCTTTTACCCTATTATAAGTAGATTAATGATTATATTATAGTTCTAATTTCAATAAAAGAAATCATCGACATAGTTTTGTGTGAAACGAGCAGGACTAAAATGACATACTTCCTCCGTCCTTTAATATTTGACACAGTTGACCTTATTACGCATGCCAATGCATAATTTTGAGCTTAAATATCTTGAATAATATATTTAAAAAAATTATGAAAATTTGATATGTTGAAAATACTCGTCGAGACAAATCTAACGACATCTTATATGATATTATTTTTCTATATTAGTAGAAAAATATAGTCAAAGTAAGTTAGGTCAAAATTACAAATTTTCAAATGGGTCATCTATTACAGGACGGAGGAAGTAATAAATTTCATTCAATAAAAAATAATGGTAGTAGGAAAAGATTGCTGTTAAAGTAAATATTAATATTACAAACAATTTGATTGTTCTTGTCCGAATTTAACTTTTAAATTCACGTGGTACCCACTATTTGTCGGATGCTTCACAAGTTGAGATTTGTTGACTCGTTGACATTGACTTAGGAGTTAGGAGTATACATTTAGATTCACTGTATATTGGACAAAAGATTAAACTTTTGTTCAAGGGTCCCTCTTGCATGGTCCAGTTACTCTTTTTCACCTAGCTAAGAAAATTATATCAGTAAAAAATAACTGTAATTTTGTCAAAACCATCATAATATTATACAACTATATATATAAGCAAAAAAAACTCATTTTCTTTGTCCCAAAATATAAGCAAAAAAGACAACCTTTTATCCTATTTAATCTTGTTTTTCTAAAAAATCTCTTTTTCAAGAAAAACTTTTGTTTATTCTCATAAAATTACATGCAAATTACATTTAATTTTCTCTCTCTTTCATTTTACCCATAACCAATAACCAATGAAAATTGTTTTTACATATTCCTATAAAACTTTTTTCAAAGAAAACACAAAATATCCCAAATTCTTATGTTTTAGTTTTCTTAATAAGTGTGATTTTATTTTTTTGTTTATAATTTGGGACGGATGGAATATATATATATATATATATATATATATATATATATATATATATATATGTTCATATGAAGTTTCACCTAGCTAAAAAAATTGTTCCTCCTTCAAAAAAAAAAATATTCCTAAATAATTCTTTGACATGGAATCATTCATTCATAACTTTTTCAAATTAAGCTTTCAAACACTATTGATCATCTTTTTAATTTAATTATCTTATTTTGTTGTTTTCTAATTTGAATTGAAATTTATCTTGTAAATTTGGTTAAAACGTAATTTTTCATTTTGTATTTTATTAATGAACTAATTATTTAAAATTTTGTGATTGGTTGCTTTGAAAGGTGATGTGTTAGCTTCGACTTCAAGTAAGAATTTATCCATTAGATCAACTACATTATCTCCAACACCAGCACCAACACCATCACCAGCATTCTTATCGCCTAATCCTTTATCAAATCTTACTCAACAAATTCATCGTGCTACAACTGGTATGTTCTTCACCCTACCTCTTTTATCATAAATTTTGTAATCTATGAGACTATTTGTCTATAAAATTATTATTAAAGCAGAATATATACCAACTCCTCTTGCTCTTTATGCTTACGATTGTTTGCAGGTAGTCACTCTAACGGGCAAATTATAAAGAAAGTCATTATAGGTAATAAACTTCACTTTGATCATTACTGGCAATCTTTAATTAATACATTTGCAACGAAAGAACGACTAGATACTAGATAGTCAATTCACATGTCTAAATAGGAAGATTTGCAGTTTCTTCCATCATCACGTAATTAATAAATTTTCCTTAAAAACAGGTGTTGTAAGTGCAGTTATCGCTGTATTGATAATGTGCATCATTATTTATTGTCTTAGAAGCAAGTCATCAATACGACAGGGAAAGTTTTGGTTCAGAACCAAGAATGATAACAATGTTGAAGCATTTTTAAGAGATCATGGAGCTTTATTGCAGAAAAGATACAAATTTTCTGAAATAAAGAAAATGACAAACTCTTTCAAGGTTAAACTTGGTCAAGGGGGTTTTGGTGTTGTGTACAAAGGAAAGTTATTCAATGGTTGTGACGTTGCTATAAAGATATTGAATTCATCCAAAGGAAACGGTGAAGAATTTATTAACGAGGTTTCTAGTATTTCTAGAACCTCACATGTTAATATTGTTACCCTTCTTGGATTTTGTTTTGAAGGCACAAAAAAAGCACTCATATATGAATTTATCTCTAATGGTTCTCTTGACAAATTTATTTACAATAAGGGACCTGAGACAATTGCATCTTTGAGCTGGGATAATTTGTATCAAATTGCAAAAGGGATAGCTCGTGGGCTCGAGTACTTGCATAGAGGATGTACAACTCGAATTTTACATTTTGACATAAAACCACATAACATTATTTTAGATAAAAACTTATGTCCAAAGATTTCAGATTTTGGACTTGCAAAACTCTGTCCAAAAAAACAGAGCATTATTTCGATGTCAGATCAAAGAGGGACAATGGGATATGTAGCTCCAGAAGTGTGGAATAGACATTTCGGAGGAGTTTCATACAAGTCTGATGTTTATAGTTATGGAATGATGTTGCTGGAAATGGTTGGAGGGAGGAAAAACATTATTGCTGATGCAAGTCACACAAGTGAGATATACTTTCCACATTGGGTATACAATAGGCTTGAGCTTGGCACTAATCTGAGACCTGATGGAGTTATGGATACAGATGAAGATGAGATCGCAAGGAGAATGACTATTGTGGGTTTATGGTGCATTCAAACATTTCGAAGTGATAGAGCTACTATGAGTAAAGTGATTGAAATGTTAGAAGTTAATATGAATTCACTGGAAATGCCACCAAAACCATTACATTCATCTCCCACTAGATCAATATCAGAGTCTTCTTAA
Protein sequence

>MS.gene73573.t1

MLKQFFLLDLVLIFCVLALASTQSANNVTATYQSFNSPATKQGIGNKWNLNTSGVLCASQDGNKSLSWPIKYGWAAFCGPVGPVGKSACGKCLKVTNPDGGNSATQQQSITPTIQTVRIVDECSNGGLDLDMDVFQLLDTSGDGNAQGYLLVDYEFVDRGDVLASTSSKNLSIRSTTLSPTPAPTPSPAFLSPNPLSNLTQQIHRATTGSHSNGQIIKKVIIGVVSAVIAVLIMCIIIYCLRSKSSIRQGKFWFRTKNDNNVEAFLRDHGALLQKRYKFSEIKKMTNSFKVKLGQGGFGVVYKGKLFNGCDVAIKILNSSKGNGEEFINESIISMSDQRGTMGYVAPEVWNRHFGGVSYKSDVYSYGMMLLEMVGGRKNIIADASHTSEIYFPHWVYNRLELGTNLRPDGVMDTDEDEIARRMTIVGLWCIQTFRSDRATMSKVIEMLEVNMNSLEMPPKPLHSSPTRSISESS