Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05427.t1 | RHN52766.1 | 58.4 | 286 | 11 | 2 | 1 | 179 | 221 | 505 | 5.10E-76 | 293.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05427.t1 | F4HQ20 | 30.0 | 303 | 86 | 4 | 1 | 177 | 346 | 648 | 9.2e-34 | 144.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05427.t1 | A0A396HHN8 | 58.4 | 286 | 11 | 2 | 1 | 179 | 221 | 505 | 3.7e-76 | 293.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050780 | MS.gene05427 | 0.827623 | 1.41E-54 | -1.69E-46 |
MS.gene052493 | MS.gene05427 | 0.801155 | 1.03E-48 | -1.69E-46 |
MS.gene05410 | MS.gene05427 | 0.846362 | 2.28E-59 | -1.69E-46 |
MS.gene05414 | MS.gene05427 | 0.820188 | 7.83E-53 | -1.69E-46 |
MS.gene05425 | MS.gene05427 | 0.869767 | 2.42E-66 | -1.69E-46 |
MS.gene05427 | MS.gene05428 | 0.83618 | 1.09E-56 | -1.69E-46 |
MS.gene05427 | MS.gene058526 | 0.820454 | 6.80E-53 | -1.69E-46 |
MS.gene05427 | MS.gene058527 | 0.819335 | 1.23E-52 | -1.69E-46 |
MS.gene05427 | MS.gene058528 | 0.818887 | 1.55E-52 | -1.69E-46 |
MS.gene05427 | MS.gene065768 | 0.825758 | 3.94E-54 | -1.69E-46 |
MS.gene05427 | MS.gene074100 | 0.82001 | 8.60E-53 | -1.69E-46 |
MS.gene05427 | MS.gene28498 | 0.801019 | 1.10E-48 | -1.69E-46 |
MS.gene05427 | MS.gene40123 | 0.805604 | 1.23E-49 | -1.69E-46 |
MS.gene05427 | MS.gene51293 | 0.81437 | 1.60E-51 | -1.69E-46 |
MS.gene05427 | MS.gene55496 | 0.803932 | 2.75E-49 | -1.69E-46 |
MS.gene05427 | MS.gene58468 | 0.812097 | 5.03E-51 | -1.69E-46 |
MS.gene05427 | MS.gene64645 | 0.805966 | 1.03E-49 | -1.69E-46 |
MS.gene05427 | MS.gene68293 | 0.805713 | 1.17E-49 | -1.69E-46 |
MS.gene05427 | MS.gene73570 | 0.845254 | 4.56E-59 | -1.69E-46 |
MS.gene05427 | MS.gene73573 | 0.817693 | 2.89E-52 | -1.69E-46 |
MS.gene05427 | MS.gene89581 | 0.80934 | 1.99E-50 | -1.69E-46 |
MS.gene05427 | MS.gene90413 | 0.800565 | 1.36E-48 | -1.69E-46 |
MS.gene05427 | MS.gene98848 | 0.814891 | 1.22E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05427.t1 | MTR_6g083210 | 94.737 | 133 | 6 | 1 | 47 | 179 | 173 | 304 | 2.19e-89 | 264 |
MS.gene05427.t1 | MTR_6g083210 | 93.750 | 48 | 3 | 0 | 1 | 48 | 1 | 48 | 1.05e-23 | 95.1 |
MS.gene05427.t1 | MTR_6g083290 | 92.481 | 133 | 9 | 1 | 47 | 179 | 185 | 316 | 3.12e-86 | 256 |
MS.gene05427.t1 | MTR_6g083270 | 93.130 | 131 | 8 | 1 | 47 | 177 | 328 | 457 | 5.03e-85 | 258 |
MS.gene05427.t1 | MTR_6g083300 | 89.474 | 133 | 13 | 1 | 47 | 179 | 173 | 304 | 1.20e-82 | 246 |
MS.gene05427.t1 | MTR_6g083300 | 95.833 | 48 | 2 | 0 | 1 | 48 | 1 | 48 | 3.89e-24 | 96.3 |
MS.gene05427.t1 | MTR_6g082950 | 86.466 | 133 | 17 | 1 | 47 | 179 | 293 | 424 | 4.21e-81 | 246 |
MS.gene05427.t1 | MTR_6g082950 | 81.250 | 48 | 9 | 0 | 1 | 48 | 121 | 168 | 1.62e-19 | 85.1 |
MS.gene05427.t1 | MTR_6g082870 | 85.714 | 133 | 18 | 1 | 47 | 179 | 530 | 661 | 3.96e-77 | 243 |
MS.gene05427.t1 | MTR_6g082870 | 89.583 | 48 | 5 | 0 | 1 | 48 | 358 | 405 | 2.19e-22 | 93.6 |
MS.gene05427.t1 | MTR_6g083760 | 84.211 | 133 | 20 | 1 | 47 | 179 | 493 | 624 | 2.20e-76 | 240 |
MS.gene05427.t1 | MTR_6g083760 | 89.583 | 48 | 5 | 0 | 1 | 48 | 321 | 368 | 8.01e-21 | 89.0 |
MS.gene05427.t1 | MTR_6g083740 | 74.797 | 123 | 30 | 1 | 57 | 179 | 122 | 243 | 7.46e-62 | 192 |
MS.gene05427.t1 | MTR_6g083740 | 68.750 | 48 | 15 | 0 | 1 | 48 | 1 | 48 | 1.08e-15 | 72.8 |
MS.gene05427.t1 | MTR_6g082860 | 67.376 | 141 | 44 | 1 | 39 | 179 | 221 | 359 | 1.42e-61 | 194 |
MS.gene05427.t1 | MTR_6g082860 | 79.167 | 48 | 10 | 0 | 1 | 48 | 57 | 104 | 2.38e-18 | 81.3 |
MS.gene05427.t1 | MTR_6g082830 | 66.667 | 141 | 45 | 1 | 39 | 179 | 165 | 303 | 5.89e-61 | 191 |
MS.gene05427.t1 | MTR_6g082830 | 81.250 | 48 | 9 | 0 | 1 | 48 | 1 | 48 | 4.57e-19 | 82.8 |
MS.gene05427.t1 | MTR_6g083780 | 72.180 | 133 | 35 | 2 | 47 | 179 | 522 | 652 | 1.56e-60 | 199 |
MS.gene05427.t1 | MTR_6g083780 | 72.917 | 48 | 13 | 0 | 1 | 48 | 350 | 397 | 1.18e-15 | 74.3 |
MS.gene05427.t1 | MTR_8g104520 | 62.759 | 145 | 50 | 4 | 36 | 177 | 502 | 645 | 1.68e-52 | 177 |
MS.gene05427.t1 | MTR_8g104520 | 72.917 | 48 | 13 | 0 | 1 | 48 | 333 | 380 | 1.58e-15 | 73.9 |
MS.gene05427.t1 | MTR_1g110140 | 58.779 | 131 | 53 | 1 | 47 | 177 | 225 | 354 | 3.82e-50 | 165 |
MS.gene05427.t1 | MTR_1g110140 | 64.583 | 48 | 17 | 0 | 1 | 48 | 52 | 99 | 5.26e-13 | 66.2 |
MS.gene05427.t1 | MTR_1g110220 | 59.524 | 126 | 50 | 1 | 47 | 172 | 423 | 547 | 1.35e-47 | 162 |
MS.gene05427.t1 | MTR_1g110220 | 64.583 | 48 | 17 | 0 | 1 | 48 | 275 | 322 | 1.27e-12 | 65.5 |
MS.gene05427.t1 | MTR_1g110260 | 59.524 | 126 | 50 | 1 | 47 | 172 | 403 | 527 | 3.25e-45 | 156 |
MS.gene05427.t1 | MTR_1g110260 | 68.750 | 48 | 15 | 0 | 1 | 48 | 230 | 277 | 1.47e-13 | 68.2 |
MS.gene05427.t1 | MTR_7g082470 | 58.915 | 129 | 51 | 2 | 44 | 171 | 500 | 627 | 1.67e-44 | 155 |
MS.gene05427.t1 | MTR_7g082470 | 68.750 | 48 | 15 | 0 | 1 | 48 | 330 | 377 | 1.05e-14 | 71.6 |
MS.gene05427.t1 | MTR_7g082510 | 55.396 | 139 | 58 | 2 | 44 | 179 | 512 | 649 | 3.06e-44 | 155 |
MS.gene05427.t1 | MTR_7g082510 | 64.583 | 48 | 17 | 0 | 1 | 48 | 342 | 389 | 2.19e-14 | 70.5 |
MS.gene05427.t1 | MTR_7g085860 | 58.594 | 128 | 51 | 2 | 44 | 171 | 331 | 456 | 8.30e-44 | 151 |
MS.gene05427.t1 | MTR_7g085860 | 70.213 | 47 | 14 | 0 | 1 | 47 | 203 | 249 | 1.72e-14 | 70.9 |
MS.gene05427.t1 | MTR_7g082430 | 57.031 | 128 | 54 | 1 | 44 | 171 | 481 | 607 | 2.60e-43 | 152 |
MS.gene05427.t1 | MTR_7g082430 | 68.750 | 48 | 15 | 0 | 1 | 48 | 311 | 358 | 1.24e-14 | 71.2 |
MS.gene05427.t1 | MTR_1g110230 | 57.724 | 123 | 51 | 1 | 50 | 172 | 472 | 593 | 3.06e-43 | 151 |
MS.gene05427.t1 | MTR_1g110230 | 68.750 | 48 | 15 | 0 | 1 | 48 | 312 | 359 | 4.98e-14 | 69.7 |
MS.gene05427.t1 | MTR_7g082380 | 56.154 | 130 | 55 | 2 | 44 | 172 | 227 | 355 | 7.39e-43 | 147 |
MS.gene05427.t1 | MTR_7g082380 | 70.833 | 48 | 14 | 0 | 1 | 48 | 57 | 104 | 6.57e-16 | 74.7 |
MS.gene05427.t1 | MTR_7g082280 | 51.974 | 152 | 68 | 3 | 22 | 169 | 568 | 718 | 2.46e-42 | 150 |
MS.gene05427.t1 | MTR_7g082280 | 64.583 | 48 | 17 | 0 | 1 | 48 | 452 | 499 | 1.52e-13 | 68.2 |
MS.gene05427.t1 | MTR_7g082490 | 55.556 | 126 | 55 | 1 | 44 | 169 | 277 | 401 | 2.98e-42 | 145 |
MS.gene05427.t1 | MTR_7g082490 | 72.917 | 48 | 13 | 0 | 1 | 48 | 128 | 175 | 5.19e-16 | 75.1 |
MS.gene05427.t1 | MTR_1g115485 | 54.676 | 139 | 59 | 2 | 44 | 179 | 527 | 664 | 6.76e-42 | 149 |
MS.gene05427.t1 | MTR_1g115485 | 64.583 | 48 | 17 | 0 | 1 | 48 | 357 | 404 | 3.65e-13 | 67.0 |
MS.gene05427.t1 | MTR_4g044393 | 54.762 | 126 | 56 | 1 | 44 | 169 | 700 | 824 | 1.45e-41 | 148 |
MS.gene05427.t1 | MTR_4g044393 | 66.667 | 48 | 16 | 0 | 1 | 48 | 530 | 577 | 1.05e-13 | 68.6 |
MS.gene05427.t1 | MTR_7g082360 | 56.349 | 126 | 52 | 2 | 44 | 169 | 204 | 326 | 1.47e-41 | 143 |
MS.gene05427.t1 | MTR_7g082460 | 54.676 | 139 | 59 | 2 | 44 | 179 | 516 | 653 | 1.61e-41 | 147 |
MS.gene05427.t1 | MTR_7g082460 | 72.917 | 48 | 13 | 0 | 1 | 48 | 346 | 393 | 1.04e-16 | 77.4 |
MS.gene05427.t1 | MTR_7g082300 | 55.814 | 129 | 56 | 1 | 44 | 172 | 716 | 843 | 1.05e-40 | 146 |
MS.gene05427.t1 | MTR_7g082300 | 72.917 | 48 | 13 | 0 | 1 | 48 | 547 | 594 | 1.64e-15 | 73.9 |
MS.gene05427.t1 | MTR_1g027160 | 47.794 | 136 | 68 | 3 | 44 | 179 | 168 | 300 | 8.17e-40 | 137 |
MS.gene05427.t1 | MTR_1g027160 | 64.583 | 48 | 17 | 0 | 1 | 48 | 1 | 48 | 4.21e-12 | 63.5 |
MS.gene05427.t1 | MTR_7g082110 | 54.688 | 128 | 57 | 1 | 44 | 171 | 702 | 828 | 1.29e-39 | 143 |
MS.gene05427.t1 | MTR_7g082110 | 64.583 | 48 | 17 | 0 | 1 | 48 | 532 | 579 | 3.31e-13 | 67.4 |
MS.gene05427.t1 | MTR_7g082400 | 53.488 | 129 | 58 | 2 | 44 | 171 | 250 | 377 | 4.06e-39 | 137 |
MS.gene05427.t1 | MTR_7g082400 | 68.293 | 41 | 13 | 0 | 8 | 48 | 87 | 127 | 1.58e-11 | 62.0 |
MS.gene05427.t1 | MTR_1g026990 | 48.529 | 136 | 67 | 3 | 44 | 179 | 168 | 300 | 7.03e-39 | 135 |
MS.gene05427.t1 | MTR_1g026990 | 64.583 | 48 | 17 | 0 | 1 | 48 | 1 | 48 | 6.85e-12 | 62.8 |
MS.gene05427.t1 | MTR_0394s0020 | 50.794 | 126 | 61 | 1 | 44 | 169 | 240 | 364 | 3.42e-38 | 134 |
MS.gene05427.t1 | MTR_1g027460 | 48.485 | 132 | 63 | 4 | 44 | 174 | 195 | 322 | 5.01e-38 | 134 |
MS.gene05427.t1 | MTR_1g027460 | 62.500 | 48 | 18 | 0 | 1 | 48 | 28 | 75 | 1.31e-11 | 62.4 |
MS.gene05427.t1 | MTR_1g027540 | 47.059 | 136 | 69 | 3 | 44 | 179 | 270 | 402 | 8.77e-38 | 134 |
MS.gene05427.t1 | MTR_1g027250 | 47.794 | 136 | 68 | 3 | 44 | 179 | 168 | 300 | 1.52e-37 | 132 |
MS.gene05427.t1 | MTR_1g108910 | 51.587 | 126 | 43 | 1 | 47 | 172 | 211 | 318 | 1.36e-36 | 129 |
MS.gene05427.t1 | MTR_1g027320 | 46.763 | 139 | 66 | 4 | 29 | 166 | 157 | 288 | 1.81e-36 | 129 |
MS.gene05427.t1 | MTR_1g027320 | 60.417 | 48 | 19 | 0 | 1 | 48 | 1 | 48 | 5.28e-11 | 60.5 |
MS.gene05427.t1 | MTR_3g028630 | 47.101 | 138 | 67 | 3 | 27 | 164 | 252 | 383 | 2.86e-36 | 130 |
MS.gene05427.t1 | MTR_3g028630 | 70.833 | 48 | 14 | 0 | 1 | 48 | 98 | 145 | 7.83e-14 | 68.9 |
MS.gene05427.t1 | MTR_1g028020 | 43.137 | 153 | 81 | 3 | 27 | 179 | 300 | 446 | 7.73e-36 | 132 |
MS.gene05427.t1 | MTR_1g028290 | 51.587 | 126 | 57 | 3 | 44 | 168 | 455 | 577 | 2.74e-35 | 130 |
MS.gene05427.t1 | MTR_1g028290 | 60.417 | 48 | 19 | 0 | 1 | 48 | 287 | 334 | 4.36e-11 | 60.8 |
MS.gene05427.t1 | MTR_1g110160 | 49.618 | 131 | 49 | 2 | 50 | 179 | 466 | 580 | 4.54e-35 | 129 |
MS.gene05427.t1 | MTR_1g110160 | 62.500 | 48 | 18 | 0 | 1 | 48 | 321 | 368 | 6.13e-13 | 66.2 |
MS.gene05427.t1 | MTR_6g045030 | 44.286 | 140 | 72 | 3 | 27 | 166 | 261 | 394 | 5.16e-35 | 127 |
MS.gene05427.t1 | MTR_6g045030 | 66.667 | 48 | 16 | 0 | 1 | 48 | 107 | 154 | 7.94e-13 | 65.9 |
MS.gene05427.t1 | MTR_4g073230 | 48.507 | 134 | 63 | 4 | 47 | 178 | 468 | 597 | 5.51e-35 | 129 |
MS.gene05427.t1 | MTR_4g073230 | 61.702 | 47 | 18 | 0 | 1 | 47 | 297 | 343 | 3.40e-12 | 64.3 |
MS.gene05427.t1 | MTR_1g028100 | 42.857 | 140 | 75 | 2 | 27 | 166 | 242 | 376 | 8.12e-35 | 126 |
MS.gene05427.t1 | MTR_1g031430 | 45.185 | 135 | 69 | 3 | 44 | 175 | 48 | 180 | 1.57e-34 | 120 |
MS.gene05427.t1 | MTR_1g027840 | 43.571 | 140 | 73 | 3 | 27 | 166 | 181 | 314 | 1.97e-34 | 124 |
MS.gene05427.t1 | MTR_1g027840 | 70.833 | 48 | 14 | 0 | 1 | 48 | 27 | 74 | 5.73e-14 | 68.9 |
MS.gene05427.t1 | MTR_1g031530 | 42.282 | 149 | 80 | 3 | 27 | 175 | 183 | 325 | 2.59e-34 | 124 |
MS.gene05427.t1 | MTR_1g027930 | 42.857 | 140 | 74 | 3 | 27 | 166 | 125 | 258 | 3.51e-34 | 122 |
MS.gene05427.t1 | MTR_1g027730 | 38.554 | 166 | 90 | 4 | 1 | 166 | 161 | 314 | 5.10e-34 | 123 |
MS.gene05427.t1 | MTR_1g027730 | 64.583 | 48 | 17 | 0 | 1 | 48 | 27 | 74 | 5.50e-12 | 63.2 |
MS.gene05427.t1 | MTR_1g027830 | 44.286 | 140 | 72 | 3 | 27 | 166 | 508 | 641 | 5.10e-34 | 127 |
MS.gene05427.t1 | MTR_1g027830 | 72.917 | 48 | 13 | 0 | 1 | 48 | 354 | 401 | 4.99e-15 | 72.4 |
MS.gene05427.t1 | MTR_1g031540 | 45.333 | 150 | 71 | 5 | 27 | 172 | 149 | 291 | 8.30e-34 | 126 |
MS.gene05427.t1 | MTR_1g027990 | 44.853 | 136 | 70 | 2 | 29 | 164 | 550 | 680 | 8.56e-34 | 126 |
MS.gene05427.t1 | MTR_1g027990 | 67.347 | 49 | 15 | 1 | 1 | 48 | 393 | 441 | 3.89e-12 | 63.9 |
MS.gene05427.t1 | MTR_1g031540 | 50.000 | 130 | 58 | 4 | 47 | 172 | 457 | 583 | 9.05e-34 | 126 |
MS.gene05427.t1 | MTR_1g110270 | 50.000 | 120 | 53 | 2 | 47 | 166 | 491 | 603 | 1.33e-33 | 125 |
MS.gene05427.t1 | MTR_1g110270 | 50.000 | 84 | 33 | 1 | 2 | 85 | 318 | 392 | 1.56e-16 | 76.6 |
MS.gene05427.t1 | MTR_1g028280 | 45.324 | 139 | 70 | 3 | 27 | 165 | 487 | 619 | 1.77e-33 | 125 |
MS.gene05427.t1 | MTR_1g028280 | 65.306 | 49 | 16 | 1 | 1 | 48 | 332 | 380 | 2.37e-11 | 61.6 |
MS.gene05427.t1 | MTR_1g031580 | 46.565 | 131 | 68 | 2 | 47 | 177 | 470 | 598 | 1.88e-33 | 125 |
MS.gene05427.t1 | MTR_1g031320 | 44.366 | 142 | 73 | 3 | 27 | 168 | 458 | 593 | 1.97e-33 | 125 |
MS.gene05427.t1 | MTR_1g028280 | 45.324 | 139 | 70 | 3 | 27 | 165 | 526 | 658 | 2.14e-33 | 125 |
MS.gene05427.t1 | MTR_1g028280 | 65.306 | 49 | 16 | 1 | 1 | 48 | 371 | 419 | 2.72e-11 | 61.6 |
MS.gene05427.t1 | MTR_1g027410 | 49.194 | 124 | 59 | 3 | 44 | 166 | 267 | 387 | 2.69e-33 | 122 |
MS.gene05427.t1 | MTR_1g027410 | 60.417 | 48 | 19 | 0 | 1 | 48 | 100 | 147 | 7.84e-11 | 60.1 |
MS.gene05427.t1 | MTR_1g027680 | 49.153 | 118 | 59 | 1 | 47 | 164 | 561 | 677 | 3.20e-33 | 124 |
MS.gene05427.t1 | MTR_1g027680 | 69.388 | 49 | 14 | 1 | 1 | 48 | 390 | 438 | 5.76e-13 | 66.6 |
MS.gene05427.t1 | MTR_1g031460 | 48.361 | 122 | 61 | 2 | 47 | 168 | 461 | 580 | 4.94e-33 | 124 |
MS.gene05427.t1 | MTR_1g031280 | 42.949 | 156 | 80 | 4 | 27 | 179 | 499 | 648 | 6.13e-33 | 123 |
MS.gene05427.t1 | MTR_1g028170 | 40.260 | 154 | 86 | 3 | 26 | 179 | 268 | 415 | 8.43e-33 | 121 |
MS.gene05427.t1 | MTR_1g027070 | 44.118 | 136 | 74 | 2 | 44 | 179 | 564 | 697 | 1.50e-32 | 122 |
MS.gene05427.t1 | MTR_1g027070 | 66.000 | 50 | 15 | 1 | 1 | 48 | 395 | 444 | 4.02e-12 | 63.9 |
MS.gene05427.t1 | MTR_1g031200 | 45.185 | 135 | 69 | 3 | 48 | 179 | 370 | 502 | 2.89e-32 | 120 |
MS.gene05427.t1 | MTR_1g031200 | 56.250 | 48 | 21 | 0 | 1 | 48 | 199 | 246 | 8.87e-11 | 60.1 |
MS.gene05427.t1 | MTR_1g031510 | 45.714 | 140 | 70 | 3 | 27 | 166 | 470 | 603 | 5.02e-32 | 121 |
MS.gene05427.t1 | MTR_1g027050 | 36.872 | 179 | 101 | 4 | 1 | 179 | 568 | 734 | 7.60e-32 | 120 |
MS.gene05427.t1 | MTR_1g027140 | 36.872 | 179 | 101 | 4 | 1 | 179 | 565 | 731 | 1.49e-31 | 120 |
MS.gene05427.t1 | MTR_1g027690 | 50.413 | 121 | 57 | 3 | 47 | 167 | 457 | 574 | 1.81e-31 | 119 |
MS.gene05427.t1 | MTR_1g028130 | 44.361 | 133 | 70 | 4 | 47 | 178 | 459 | 588 | 2.35e-31 | 119 |
MS.gene05427.t1 | MTR_1g028080 | 44.361 | 133 | 70 | 4 | 47 | 178 | 459 | 588 | 4.93e-31 | 118 |
MS.gene05427.t1 | MTR_1g027820 | 47.934 | 121 | 58 | 2 | 47 | 165 | 426 | 543 | 2.24e-30 | 116 |
MS.gene05427.t1 | MTR_1g027820 | 56.250 | 48 | 21 | 0 | 1 | 48 | 255 | 302 | 7.58e-11 | 60.5 |
MS.gene05427.t1 | MTR_1g027500 | 39.869 | 153 | 85 | 4 | 26 | 177 | 454 | 600 | 6.63e-30 | 115 |
MS.gene05427.t1 | MTR_1g027420 | 41.176 | 153 | 83 | 4 | 26 | 177 | 397 | 543 | 3.04e-29 | 112 |
MS.gene05427.t1 | MTR_1g027700 | 45.600 | 125 | 64 | 2 | 47 | 170 | 203 | 324 | 3.80e-29 | 110 |
MS.gene05427.t1 | MTR_0690s0010 | 45.000 | 120 | 61 | 2 | 47 | 165 | 407 | 522 | 4.03e-29 | 112 |
MS.gene05427.t1 | MTR_0690s0010 | 60.417 | 48 | 19 | 0 | 1 | 48 | 236 | 283 | 1.60e-11 | 62.4 |
MS.gene05427.t1 | MTR_1g027960 | 47.500 | 120 | 59 | 2 | 47 | 165 | 447 | 563 | 4.32e-29 | 112 |
MS.gene05427.t1 | MTR_1g027960 | 60.417 | 48 | 19 | 0 | 1 | 48 | 276 | 323 | 7.50e-11 | 60.5 |
MS.gene05427.t1 | MTR_1g027030 | 35.976 | 164 | 94 | 3 | 1 | 164 | 567 | 719 | 7.09e-29 | 112 |
MS.gene05427.t1 | MTR_1g027970 | 47.934 | 121 | 60 | 3 | 47 | 167 | 459 | 576 | 8.16e-29 | 112 |
MS.gene05427.t1 | MTR_1g027030 | 35.976 | 164 | 94 | 3 | 1 | 164 | 517 | 669 | 8.65e-29 | 112 |
MS.gene05427.t1 | MTR_6g445600 | 45.000 | 120 | 61 | 2 | 47 | 165 | 433 | 548 | 1.24e-28 | 111 |
MS.gene05427.t1 | MTR_6g445600 | 60.417 | 48 | 19 | 0 | 1 | 48 | 262 | 309 | 3.01e-11 | 61.6 |
MS.gene05427.t1 | MTR_1g027370 | 47.015 | 134 | 65 | 4 | 47 | 179 | 473 | 601 | 1.46e-28 | 111 |
MS.gene05427.t1 | MTR_1g026940 | 43.511 | 131 | 68 | 3 | 47 | 176 | 472 | 597 | 1.55e-28 | 111 |
MS.gene05427.t1 | MTR_1g027060 | 44.000 | 125 | 66 | 2 | 47 | 170 | 375 | 496 | 2.99e-28 | 110 |
MS.gene05427.t1 | MTR_1g027890 | 43.697 | 119 | 64 | 1 | 47 | 165 | 272 | 387 | 4.71e-28 | 108 |
MS.gene05427.t1 | MTR_1g031560 | 46.763 | 139 | 66 | 4 | 27 | 164 | 488 | 619 | 6.53e-28 | 109 |
MS.gene05427.t1 | MTR_1g027440 | 41.985 | 131 | 60 | 3 | 44 | 174 | 446 | 560 | 8.39e-28 | 108 |
MS.gene05427.t1 | MTR_1g027440 | 62.500 | 48 | 18 | 0 | 1 | 48 | 279 | 326 | 1.11e-11 | 62.8 |
MS.gene05427.t1 | MTR_3g028650 | 46.218 | 119 | 60 | 2 | 47 | 164 | 428 | 543 | 1.16e-27 | 108 |
MS.gene05427.t1 | MTR_7g060570 | 45.082 | 122 | 63 | 2 | 47 | 168 | 509 | 626 | 1.25e-27 | 108 |
MS.gene05427.t1 | MTR_7g060570 | 59.574 | 47 | 19 | 0 | 1 | 47 | 339 | 385 | 2.92e-11 | 61.6 |
MS.gene05427.t1 | MTR_1g027150 | 44.167 | 120 | 63 | 2 | 47 | 165 | 428 | 544 | 2.26e-27 | 107 |
MS.gene05427.t1 | MTR_1g031520 | 43.662 | 142 | 74 | 3 | 27 | 168 | 467 | 602 | 2.34e-27 | 107 |
MS.gene05427.t1 | MTR_1g027040 | 45.161 | 124 | 63 | 3 | 47 | 168 | 430 | 550 | 2.83e-27 | 107 |
MS.gene05427.t1 | MTR_1g028220 | 45.833 | 120 | 61 | 2 | 47 | 165 | 430 | 546 | 3.64e-27 | 107 |
MS.gene05427.t1 | MTR_1g027200 | 40.789 | 152 | 73 | 5 | 26 | 176 | 383 | 518 | 2.63e-25 | 101 |
MS.gene05427.t1 | MTR_4g073220 | 34.940 | 166 | 89 | 6 | 1 | 164 | 448 | 596 | 7.16e-23 | 95.1 |
MS.gene05427.t1 | MTR_2g036490 | 40.496 | 121 | 65 | 4 | 47 | 165 | 302 | 417 | 9.74e-23 | 94.4 |
MS.gene05427.t1 | MTR_1g031470 | 51.136 | 88 | 41 | 2 | 79 | 166 | 4 | 89 | 1.43e-22 | 87.8 |
MS.gene05427.t1 | MTR_2g036460 | 40.984 | 122 | 63 | 5 | 47 | 165 | 312 | 427 | 5.63e-22 | 92.0 |
MS.gene05427.t1 | MTR_2g036500 | 38.806 | 134 | 70 | 5 | 47 | 178 | 243 | 366 | 9.06e-21 | 88.6 |
MS.gene05427.t1 | MTR_2g080100 | 40.602 | 133 | 71 | 4 | 47 | 176 | 618 | 745 | 6.49e-20 | 86.7 |
MS.gene05427.t1 | MTR_6g082930 | 81.250 | 48 | 9 | 0 | 1 | 48 | 121 | 168 | 8.10e-20 | 85.5 |
MS.gene05427.t1 | MTR_2g036440 | 41.026 | 117 | 60 | 4 | 47 | 161 | 244 | 353 | 1.34e-19 | 85.1 |
MS.gene05427.t1 | MTR_1g099400 | 40.000 | 125 | 60 | 7 | 47 | 164 | 691 | 807 | 2.86e-19 | 84.7 |
MS.gene05427.t1 | MTR_2g080080 | 39.850 | 133 | 72 | 4 | 47 | 176 | 649 | 776 | 4.43e-19 | 84.3 |
MS.gene05427.t1 | MTR_3g107070 | 41.732 | 127 | 58 | 5 | 47 | 168 | 641 | 756 | 8.14e-19 | 83.6 |
MS.gene05427.t1 | MTR_2g073250 | 42.276 | 123 | 57 | 6 | 47 | 163 | 653 | 767 | 1.07e-18 | 83.2 |
MS.gene05427.t1 | MTR_6g043510 | 43.119 | 109 | 50 | 5 | 62 | 164 | 671 | 773 | 2.95e-18 | 81.6 |
MS.gene05427.t1 | MTR_2g036480 | 38.136 | 118 | 66 | 5 | 47 | 161 | 260 | 373 | 4.55e-17 | 78.2 |
MS.gene05427.t1 | MTR_8g030500 | 35.099 | 151 | 71 | 7 | 31 | 166 | 639 | 777 | 7.65e-17 | 77.8 |
MS.gene05427.t1 | MTR_6g043790 | 42.056 | 107 | 56 | 4 | 59 | 162 | 673 | 776 | 1.47e-16 | 77.0 |
MS.gene05427.t1 | MTR_8g028065 | 32.593 | 135 | 86 | 2 | 33 | 164 | 723 | 855 | 2.18e-16 | 76.3 |
MS.gene05427.t1 | MTR_2g054870 | 36.434 | 129 | 68 | 4 | 58 | 175 | 287 | 412 | 9.14e-16 | 74.3 |
MS.gene05427.t1 | MTR_2g036430 | 37.383 | 107 | 61 | 3 | 48 | 152 | 228 | 330 | 1.01e-15 | 74.3 |
MS.gene05427.t1 | MTR_4g113710 | 37.719 | 114 | 60 | 6 | 58 | 162 | 285 | 396 | 1.12e-15 | 74.3 |
MS.gene05427.t1 | MTR_1g032930 | 33.621 | 116 | 64 | 4 | 59 | 164 | 676 | 788 | 2.75e-15 | 73.2 |
MS.gene05427.t1 | MTR_2g011210 | 37.069 | 116 | 72 | 1 | 57 | 172 | 704 | 818 | 3.33e-15 | 73.2 |
MS.gene05427.t1 | MTR_4g091570 | 34.043 | 141 | 87 | 3 | 34 | 171 | 908 | 1045 | 4.41e-15 | 72.8 |
MS.gene05427.t1 | MTR_1g012550 | 39.640 | 111 | 55 | 5 | 47 | 152 | 669 | 772 | 5.06e-15 | 72.4 |
MS.gene05427.t1 | MTR_0280s0040 | 36.283 | 113 | 60 | 5 | 58 | 164 | 670 | 776 | 1.10e-14 | 71.6 |
MS.gene05427.t1 | MTR_1g031400 | 45.000 | 80 | 39 | 2 | 27 | 106 | 173 | 247 | 1.15e-14 | 70.1 |
MS.gene05427.t1 | MTR_4g114240 | 34.677 | 124 | 74 | 4 | 44 | 164 | 703 | 822 | 1.54e-14 | 71.2 |
MS.gene05427.t1 | MTR_2g089440 | 34.677 | 124 | 67 | 5 | 47 | 164 | 436 | 551 | 2.11e-14 | 70.5 |
MS.gene05427.t1 | MTR_2g103810 | 40.323 | 124 | 67 | 4 | 47 | 168 | 661 | 779 | 2.23e-14 | 70.5 |
MS.gene05427.t1 | MTR_2g089440 | 34.677 | 124 | 67 | 5 | 47 | 164 | 668 | 783 | 4.18e-14 | 69.7 |
MS.gene05427.t1 | MTR_4g081665 | 33.333 | 108 | 72 | 0 | 57 | 164 | 674 | 781 | 4.24e-14 | 69.7 |
MS.gene05427.t1 | MTR_1g027920 | 56.364 | 55 | 23 | 1 | 112 | 166 | 38 | 91 | 5.39e-14 | 64.7 |
MS.gene05427.t1 | MTR_2g011190 | 34.188 | 117 | 76 | 1 | 57 | 173 | 700 | 815 | 5.67e-14 | 69.3 |
MS.gene05427.t1 | MTR_4g081750 | 32.407 | 108 | 73 | 0 | 57 | 164 | 1021 | 1128 | 6.83e-14 | 69.3 |
MS.gene05427.t1 | MTR_4g114280 | 35.294 | 119 | 70 | 4 | 47 | 162 | 720 | 834 | 1.34e-13 | 68.6 |
MS.gene05427.t1 | MTR_5g033690 | 33.813 | 139 | 80 | 4 | 47 | 177 | 479 | 613 | 2.32e-13 | 67.8 |
MS.gene05427.t1 | MTR_2g089360 | 36.036 | 111 | 63 | 4 | 58 | 164 | 672 | 778 | 3.99e-13 | 67.0 |
MS.gene05427.t1 | MTR_4g040480 | 31.967 | 122 | 81 | 2 | 57 | 177 | 689 | 809 | 6.43e-13 | 66.2 |
MS.gene05427.t1 | MTR_8g011370 | 30.435 | 115 | 63 | 3 | 59 | 164 | 700 | 806 | 7.27e-13 | 66.2 |
MS.gene05427.t1 | MTR_4g081650 | 30.597 | 134 | 88 | 2 | 34 | 164 | 652 | 783 | 1.25e-12 | 65.5 |
MS.gene05427.t1 | MTR_2g067970 | 34.400 | 125 | 70 | 8 | 47 | 166 | 773 | 890 | 2.09e-12 | 65.1 |
MS.gene05427.t1 | MTR_1g031220 | 76.471 | 34 | 8 | 0 | 47 | 80 | 39 | 72 | 2.81e-12 | 60.1 |
MS.gene05427.t1 | MTR_2g067990 | 32.000 | 125 | 73 | 6 | 47 | 166 | 885 | 1002 | 3.76e-12 | 64.3 |
MS.gene05427.t1 | MTR_1g031450 | 56.250 | 48 | 21 | 0 | 1 | 48 | 324 | 371 | 5.17e-12 | 63.5 |
MS.gene05427.t1 | MTR_0148s0080 | 31.707 | 123 | 84 | 0 | 57 | 179 | 888 | 1010 | 7.22e-12 | 63.5 |
MS.gene05427.t1 | MTR_8g461110 | 31.967 | 122 | 78 | 3 | 44 | 164 | 853 | 970 | 7.65e-12 | 63.2 |
MS.gene05427.t1 | MTR_8g465150 | 35.398 | 113 | 62 | 3 | 57 | 164 | 694 | 800 | 7.72e-12 | 63.2 |
MS.gene05427.t1 | MTR_8g052490 | 37.615 | 109 | 66 | 2 | 57 | 164 | 241 | 348 | 8.61e-12 | 62.8 |
MS.gene05427.t1 | MTR_8g052080 | 38.532 | 109 | 65 | 2 | 57 | 164 | 663 | 770 | 8.79e-12 | 63.2 |
MS.gene05427.t1 | MTR_8g061110 | 33.594 | 128 | 73 | 4 | 57 | 179 | 584 | 704 | 9.40e-12 | 63.2 |
MS.gene05427.t1 | MTR_4g091860 | 34.259 | 108 | 70 | 1 | 57 | 164 | 696 | 802 | 9.81e-12 | 62.8 |
MS.gene05427.t1 | MTR_2g068650 | 32.000 | 125 | 73 | 6 | 47 | 166 | 623 | 740 | 1.10e-11 | 62.8 |
MS.gene05427.t1 | MTR_8g461260 | 33.333 | 129 | 76 | 5 | 44 | 167 | 212 | 335 | 1.31e-11 | 62.4 |
MS.gene05427.t1 | MTR_7g056590 | 34.259 | 108 | 71 | 0 | 57 | 164 | 540 | 647 | 1.39e-11 | 62.4 |
MS.gene05427.t1 | MTR_5g013130 | 33.871 | 124 | 71 | 5 | 47 | 165 | 677 | 794 | 1.50e-11 | 62.4 |
MS.gene05427.t1 | MTR_8g052050 | 37.615 | 109 | 66 | 2 | 57 | 164 | 662 | 769 | 1.51e-11 | 62.4 |
MS.gene05427.t1 | MTR_5g013070 | 33.871 | 124 | 71 | 5 | 47 | 165 | 680 | 797 | 2.13e-11 | 62.0 |
MS.gene05427.t1 | MTR_4g093070 | 34.074 | 135 | 78 | 6 | 47 | 174 | 516 | 646 | 2.25e-11 | 62.0 |
MS.gene05427.t1 | MTR_5g055070 | 34.454 | 119 | 73 | 3 | 47 | 164 | 668 | 782 | 2.31e-11 | 62.0 |
MS.gene05427.t1 | MTR_1g105835 | 32.450 | 151 | 91 | 6 | 32 | 175 | 188 | 334 | 2.49e-11 | 61.6 |
MS.gene05427.t1 | MTR_5g055070 | 34.454 | 119 | 73 | 3 | 47 | 164 | 626 | 740 | 2.61e-11 | 61.6 |
MS.gene05427.t1 | MTR_8g465160 | 34.513 | 113 | 63 | 3 | 57 | 164 | 696 | 802 | 3.14e-11 | 61.6 |
MS.gene05427.t1 | MTR_4g081640 | 34.259 | 108 | 70 | 1 | 57 | 164 | 645 | 751 | 3.94e-11 | 61.2 |
MS.gene05427.t1 | MTR_5g068260 | 30.579 | 121 | 81 | 2 | 57 | 175 | 511 | 630 | 4.51e-11 | 60.8 |
MS.gene05427.t1 | MTR_4g093080 | 34.307 | 137 | 73 | 7 | 47 | 174 | 518 | 646 | 4.54e-11 | 60.8 |
MS.gene05427.t1 | MTR_2g006910 | 26.772 | 127 | 83 | 2 | 47 | 165 | 485 | 609 | 6.89e-11 | 60.5 |
MS.gene05427.t1 | MTR_4g081675 | 32.258 | 124 | 79 | 1 | 57 | 175 | 681 | 804 | 7.18e-11 | 60.5 |
MS.gene05427.t1 | MTR_2g006910 | 26.772 | 127 | 83 | 2 | 47 | 165 | 485 | 609 | 7.49e-11 | 60.5 |
MS.gene05427.t1 | MTR_8g067690 | 28.947 | 190 | 105 | 6 | 1 | 176 | 489 | 662 | 7.84e-11 | 60.5 |
MS.gene05427.t1 | MTR_8g052350 | 36.697 | 109 | 67 | 2 | 57 | 164 | 3 | 110 | 8.70e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05427.t1 | AT1G70250 | 51.538 | 130 | 58 | 3 | 44 | 169 | 624 | 752 | 1.18e-38 | 140 |
MS.gene05427.t1 | AT1G70250 | 63.265 | 49 | 17 | 1 | 1 | 48 | 457 | 505 | 7.14e-11 | 60.5 |
MS.gene05427.t1 | AT1G66910 | 47.445 | 137 | 69 | 3 | 44 | 177 | 509 | 645 | 1.10e-37 | 137 |
MS.gene05427.t1 | AT1G66910 | 58.333 | 48 | 20 | 0 | 1 | 48 | 343 | 390 | 2.62e-12 | 64.7 |
MS.gene05427.t1 | AT1G66910 | 47.445 | 137 | 69 | 3 | 44 | 177 | 512 | 648 | 1.30e-37 | 137 |
MS.gene05427.t1 | AT1G66910 | 58.333 | 48 | 20 | 0 | 1 | 48 | 346 | 393 | 2.88e-12 | 64.7 |
MS.gene05427.t1 | AT1G66920 | 49.630 | 135 | 66 | 2 | 44 | 177 | 446 | 579 | 2.50e-37 | 135 |
MS.gene05427.t1 | AT1G66920 | 49.630 | 135 | 66 | 2 | 44 | 177 | 472 | 605 | 2.63e-37 | 135 |
MS.gene05427.t1 | AT1G66920 | 49.630 | 135 | 66 | 2 | 44 | 177 | 464 | 597 | 2.94e-37 | 135 |
MS.gene05427.t1 | AT5G38240 | 50.000 | 132 | 62 | 3 | 44 | 172 | 429 | 559 | 3.20e-37 | 135 |
MS.gene05427.t1 | AT5G38240 | 50.000 | 132 | 62 | 3 | 44 | 172 | 475 | 605 | 5.14e-37 | 135 |
MS.gene05427.t1 | AT5G38240 | 50.000 | 132 | 62 | 3 | 44 | 172 | 493 | 623 | 5.32e-37 | 135 |
MS.gene05427.t1 | AT5G38280 | 50.000 | 134 | 61 | 4 | 47 | 176 | 499 | 630 | 6.97e-37 | 134 |
MS.gene05427.t1 | AT5G38280 | 73.469 | 49 | 12 | 1 | 1 | 48 | 329 | 377 | 1.19e-13 | 68.6 |
MS.gene05427.t1 | AT5G38280 | 50.000 | 134 | 61 | 4 | 47 | 176 | 499 | 630 | 8.30e-37 | 134 |
MS.gene05427.t1 | AT5G38280 | 73.469 | 49 | 12 | 1 | 1 | 48 | 329 | 377 | 1.39e-13 | 68.2 |
MS.gene05427.t1 | AT1G67000 | 47.260 | 146 | 63 | 4 | 44 | 176 | 721 | 865 | 1.27e-36 | 134 |
MS.gene05427.t1 | AT5G38250 | 49.242 | 132 | 63 | 3 | 44 | 172 | 472 | 602 | 3.28e-36 | 132 |
MS.gene05427.t1 | AT5G38250 | 58.333 | 48 | 20 | 0 | 1 | 48 | 312 | 359 | 4.52e-11 | 60.8 |
MS.gene05427.t1 | AT1G66980 | 49.286 | 140 | 63 | 5 | 44 | 177 | 998 | 1135 | 4.86e-36 | 132 |
MS.gene05427.t1 | AT1G66980 | 60.417 | 48 | 19 | 0 | 1 | 48 | 832 | 879 | 7.59e-12 | 63.5 |
MS.gene05427.t1 | AT5G39030 | 46.324 | 136 | 71 | 2 | 44 | 177 | 662 | 797 | 5.21e-36 | 132 |
MS.gene05427.t1 | AT1G66980 | 49.286 | 140 | 63 | 5 | 44 | 177 | 996 | 1133 | 5.35e-36 | 132 |
MS.gene05427.t1 | AT1G66980 | 60.417 | 48 | 19 | 0 | 1 | 48 | 830 | 877 | 7.81e-12 | 63.5 |
MS.gene05427.t1 | AT1G66980 | 49.286 | 140 | 63 | 5 | 44 | 177 | 952 | 1089 | 5.43e-36 | 132 |
MS.gene05427.t1 | AT1G66980 | 60.417 | 48 | 19 | 0 | 1 | 48 | 786 | 833 | 6.87e-12 | 63.5 |
MS.gene05427.t1 | AT1G66980 | 49.286 | 140 | 63 | 5 | 44 | 177 | 969 | 1106 | 5.60e-36 | 132 |
MS.gene05427.t1 | AT1G66980 | 60.417 | 48 | 19 | 0 | 1 | 48 | 803 | 850 | 7.28e-12 | 63.5 |
MS.gene05427.t1 | AT5G39030 | 46.324 | 136 | 71 | 2 | 44 | 177 | 656 | 791 | 6.94e-36 | 132 |
MS.gene05427.t1 | AT5G39020 | 47.407 | 135 | 69 | 2 | 44 | 177 | 660 | 793 | 3.04e-34 | 127 |
MS.gene05427.t1 | AT4G18250 | 51.587 | 126 | 56 | 4 | 47 | 167 | 524 | 649 | 5.83e-33 | 124 |
MS.gene05427.t1 | AT4G18250 | 67.347 | 49 | 14 | 1 | 1 | 47 | 353 | 401 | 1.02e-12 | 65.9 |
MS.gene05427.t1 | AT5G38260 | 47.967 | 123 | 62 | 2 | 44 | 164 | 485 | 607 | 2.12e-32 | 122 |
MS.gene05427.t1 | AT1G66930 | 48.031 | 127 | 62 | 2 | 44 | 166 | 511 | 637 | 1.45e-31 | 120 |
MS.gene05427.t1 | AT1G66930 | 48.031 | 127 | 62 | 2 | 44 | 166 | 480 | 606 | 1.56e-31 | 119 |
MS.gene05427.t1 | AT1G66930 | 48.031 | 127 | 62 | 2 | 44 | 166 | 720 | 846 | 2.31e-31 | 119 |
MS.gene05427.t1 | AT5G24080 | 41.935 | 124 | 58 | 6 | 47 | 164 | 572 | 687 | 1.78e-21 | 91.3 |
MS.gene05427.t1 | AT5G24080 | 41.935 | 124 | 58 | 6 | 47 | 164 | 572 | 687 | 1.78e-21 | 91.3 |
MS.gene05427.t1 | AT5G24080 | 41.935 | 124 | 58 | 6 | 47 | 164 | 699 | 814 | 2.11e-21 | 90.9 |
MS.gene05427.t1 | AT4G32300 | 45.872 | 109 | 52 | 4 | 47 | 152 | 661 | 765 | 3.83e-20 | 87.4 |
MS.gene05427.t1 | AT1G34300 | 43.564 | 101 | 45 | 3 | 59 | 152 | 662 | 757 | 2.07e-17 | 79.3 |
MS.gene05427.t1 | AT2G19130 | 37.500 | 112 | 61 | 3 | 58 | 165 | 671 | 777 | 6.18e-15 | 72.4 |
MS.gene05427.t1 | AT4G23160 | 36.719 | 128 | 74 | 4 | 57 | 179 | 536 | 661 | 2.08e-14 | 70.9 |
MS.gene05427.t1 | AT4G00340 | 37.815 | 119 | 54 | 6 | 47 | 152 | 628 | 739 | 3.16e-14 | 70.1 |
MS.gene05427.t1 | AT4G00340 | 37.815 | 119 | 54 | 6 | 47 | 152 | 649 | 760 | 3.21e-14 | 70.1 |
MS.gene05427.t1 | AT4G23180 | 35.294 | 119 | 69 | 4 | 57 | 171 | 525 | 639 | 8.40e-13 | 66.2 |
MS.gene05427.t1 | AT5G20050 | 36.111 | 108 | 50 | 3 | 58 | 152 | 288 | 389 | 1.08e-12 | 65.5 |
MS.gene05427.t1 | AT4G11900 | 31.304 | 115 | 72 | 3 | 57 | 168 | 714 | 824 | 5.81e-12 | 63.5 |
MS.gene05427.t1 | AT4G11900 | 31.304 | 115 | 72 | 3 | 57 | 168 | 645 | 755 | 5.90e-12 | 63.5 |
MS.gene05427.t1 | AT4G21390 | 31.452 | 124 | 74 | 2 | 57 | 175 | 706 | 823 | 6.83e-12 | 63.5 |
MS.gene05427.t1 | AT4G23140 | 31.579 | 152 | 86 | 5 | 34 | 175 | 509 | 652 | 7.74e-12 | 63.2 |
MS.gene05427.t1 | AT4G04540 | 34.109 | 129 | 77 | 5 | 47 | 175 | 522 | 642 | 1.09e-11 | 62.8 |
MS.gene05427.t1 | AT4G23140 | 32.800 | 125 | 72 | 3 | 57 | 175 | 528 | 646 | 1.26e-11 | 62.8 |
MS.gene05427.t1 | AT4G04540 | 34.109 | 129 | 77 | 5 | 47 | 175 | 493 | 613 | 1.40e-11 | 62.4 |
MS.gene05427.t1 | AT4G23150 | 32.353 | 136 | 87 | 2 | 47 | 179 | 505 | 638 | 1.73e-11 | 62.4 |
MS.gene05427.t1 | AT1G56130 | 33.333 | 123 | 75 | 4 | 44 | 164 | 659 | 776 | 1.74e-11 | 62.4 |
MS.gene05427.t1 | AT1G56130 | 33.333 | 123 | 75 | 4 | 44 | 164 | 710 | 827 | 1.77e-11 | 62.4 |
MS.gene05427.t1 | AT1G56130 | 33.333 | 123 | 75 | 4 | 44 | 164 | 858 | 975 | 2.49e-11 | 62.0 |
MS.gene05427.t1 | AT2G48010 | 30.328 | 122 | 78 | 4 | 47 | 165 | 455 | 572 | 2.72e-11 | 61.6 |
MS.gene05427.t1 | AT4G23210 | 36.364 | 121 | 66 | 5 | 47 | 164 | 527 | 639 | 3.23e-11 | 61.6 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 702 | 810 | 3.36e-11 | 61.6 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 767 | 875 | 3.40e-11 | 61.6 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 767 | 875 | 3.40e-11 | 61.6 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 710 | 818 | 3.43e-11 | 61.6 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 795 | 903 | 3.54e-11 | 61.2 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 867 | 975 | 3.57e-11 | 61.2 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 867 | 975 | 3.57e-11 | 61.2 |
MS.gene05427.t1 | AT1G56140 | 33.607 | 122 | 76 | 3 | 44 | 164 | 857 | 974 | 3.69e-11 | 61.2 |
MS.gene05427.t1 | AT4G03230 | 33.028 | 109 | 72 | 1 | 57 | 164 | 709 | 817 | 4.07e-11 | 61.2 |
MS.gene05427.t1 | AT4G00960 | 32.143 | 168 | 100 | 7 | 12 | 177 | 198 | 353 | 5.42e-11 | 60.5 |
Find 41 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATGACTATTGTGAGTTTA+TGG | 0.304863 | 6.1:-73361402 | MS.gene05427:CDS |
AAATATCTATTCCACACTTC+TGG | 0.310693 | 6.1:+73361631 | None:intergenic |
TCAATCACTTTACTCATTGT+AGG | 0.331327 | 6.1:+73361352 | None:intergenic |
AAGTCTGATGTTTATAGTTA+TGG | 0.337910 | 6.1:-73361592 | MS.gene05427:CDS |
AAATTCTTCACCGTTTCCTT+TGG | 0.361382 | 6.1:+73362052 | None:intergenic |
TCTGAGACCTGATGGGGTTA+TGG | 0.369076 | 6.1:-73361452 | MS.gene05427:CDS |
CATTGCTTTCTTCTCCTACT+AGG | 0.370420 | 6.1:-73361285 | MS.gene05427:CDS |
TTCCACATTGGGTATACAAT+AGG | 0.379669 | 6.1:-73361492 | MS.gene05427:CDS |
GAAAATGACAAACTCTTTCA+AGG | 0.400569 | 6.1:-73362162 | None:intergenic |
TGGAATGATGTTGTTGGAAA+TGG | 0.420140 | 6.1:-73361572 | MS.gene05427:CDS |
GGAGAAGAAAGCAATGGTTT+TGG | 0.421238 | 6.1:+73361292 | None:intergenic |
TGAGTTATACTTTCCACATT+GGG | 0.436038 | 6.1:-73361503 | MS.gene05427:CDS |
AACTCTTTCAAGGTTAAACT+TGG | 0.436900 | 6.1:-73362152 | MS.gene05427:CDS |
TACAAAGGAAAGTTATTCAA+TGG | 0.452813 | 6.1:-73362107 | MS.gene05427:CDS |
CTCATTGTAGGTCTATCACT+TGG | 0.456559 | 6.1:+73361364 | None:intergenic |
GAAGTGTGGAATAGATATTT+CGG | 0.461887 | 6.1:-73361628 | MS.gene05427:CDS |
TAGTTATGGAATGATGTTGT+TGG | 0.462211 | 6.1:-73361578 | MS.gene05427:CDS |
TCTGTATCCATAACCCCATC+AGG | 0.475664 | 6.1:+73361445 | None:intergenic |
AGAAGTTAATATGAATTCAC+TGG | 0.482850 | 6.1:-73361323 | MS.gene05427:CDS |
GGCACTAATCTGAGACCTGA+TGG | 0.487686 | 6.1:-73361460 | MS.gene05427:CDS |
GAATCTGATATTGACCTAGT+AGG | 0.489457 | 6.1:+73361271 | None:intergenic |
CTGAGTTATACTTTCCACAT+TGG | 0.514505 | 6.1:-73361504 | MS.gene05427:CDS |
GCACTAATCTGAGACCTGAT+GGG | 0.517864 | 6.1:-73361459 | MS.gene05427:CDS |
TTCAAGGTTAAACTTGGTCA+AGG | 0.527315 | 6.1:-73362146 | MS.gene05427:CDS |
TCAAGGTTAAACTTGGTCAA+GGG | 0.528873 | 6.1:-73362145 | MS.gene05427:CDS |
TTGAATTCATCCAAAGGAAA+CGG | 0.529215 | 6.1:-73362062 | MS.gene05427:CDS |
CGGTGAAGAATTTATTAACG+AGG | 0.576914 | 6.1:-73362042 | MS.gene05427:intron |
TGTTGTTGGAAATGGTTGGA+GGG | 0.581900 | 6.1:-73361564 | MS.gene05427:CDS |
CAAGGTTAAACTTGGTCAAG+GGG | 0.583035 | 6.1:-73362144 | MS.gene05427:CDS |
CAGAAGAAGATGAGATCGCA+AGG | 0.588425 | 6.1:-73361426 | MS.gene05427:CDS |
TGTTGGAAATGGTTGGAGGG+AGG | 0.595420 | 6.1:-73361561 | MS.gene05427:CDS |
GTATACAATAGGCTAGAGCT+TGG | 0.605084 | 6.1:-73361481 | MS.gene05427:CDS |
ATGATGTTGTTGGAAATGGT+TGG | 0.610758 | 6.1:-73361568 | MS.gene05427:CDS |
AAGATATTGAATTCATCCAA+AGG | 0.617351 | 6.1:-73362068 | MS.gene05427:CDS |
AGCCTATTGTATACCCAATG+TGG | 0.617903 | 6.1:+73361490 | None:intergenic |
ATGTTGTTGGAAATGGTTGG+AGG | 0.623333 | 6.1:-73361565 | MS.gene05427:CDS |
GATAGGTAGCTCCAGAAGTG+TGG | 0.625899 | 6.1:-73361642 | MS.gene05427:intron |
CACTAATCTGAGACCTGATG+GGG | 0.631515 | 6.1:-73361458 | MS.gene05427:CDS |
CTAGTAGGAGAAGAAAGCAA+TGG | 0.660506 | 6.1:+73361286 | None:intergenic |
GTGTGGAATAGATATTTCGG+AGG | 0.665761 | 6.1:-73361625 | MS.gene05427:CDS |
AAGGTTAAACTTGGTCAAGG+GGG | 0.670607 | 6.1:-73362143 | MS.gene05427:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GACAAATTTATTTACAATAA+GGG | - | chr6.1:73361511-73361530 | MS.gene05427:CDS | 15.0% |
!! | TGACAAATTTATTTACAATA+AGG | - | chr6.1:73361510-73361529 | MS.gene05427:CDS | 15.0% |
!! | AATTTGTATCAAATTGCAAA+AGG | - | chr6.1:73361565-73361584 | MS.gene05427:CDS | 20.0% |
!! | ATATATGAATTTATGTCCAA+TGG | - | chr6.1:73361481-73361500 | MS.gene05427:CDS | 20.0% |
!! | ATTTGTATCAAATTGCAAAA+GGG | - | chr6.1:73361566-73361585 | MS.gene05427:CDS | 20.0% |
! | AAGATATTGAATTCATCCAA+AGG | - | chr6.1:73361348-73361367 | MS.gene05427:CDS | 25.0% |
! | AAGTCTGATGTTTATAGTTA+TGG | - | chr6.1:73361824-73361843 | MS.gene05427:intron | 25.0% |
! | AGAAGTTAATATGAATTCAC+TGG | - | chr6.1:73362093-73362112 | MS.gene05427:CDS | 25.0% |
! | TACAAAGGAAAGTTATTCAA+TGG | - | chr6.1:73361309-73361328 | MS.gene05427:CDS | 25.0% |
! | TCATCTAAAAGAATGTTATG+TGG | + | chr6.1:73361659-73361678 | None:intergenic | 25.0% |
! | TTCAAAACAAAATCCAAGAA+GGG | + | chr6.1:73361439-73361458 | None:intergenic | 25.0% |
!!! | GAAATAATGCTCTCTTTTTT+TGG | + | chr6.1:73361728-73361747 | None:intergenic | 25.0% |
AAATATCTATTCCACACTTC+TGG | + | chr6.1:73361788-73361807 | None:intergenic | 30.0% | |
AAATTTGTCAAGAGAACCAT+TGG | + | chr6.1:73361500-73361519 | None:intergenic | 30.0% | |
AACTCTTTCAAGGTTAAACT+TGG | - | chr6.1:73361264-73361283 | MS.gene05427:CDS | 30.0% | |
CTTCAAAACAAAATCCAAGA+AGG | + | chr6.1:73361440-73361459 | None:intergenic | 30.0% | |
GAAGTGTGGAATAGATATTT+CGG | - | chr6.1:73361788-73361807 | MS.gene05427:intron | 30.0% | |
GAATGACTATTGTGAGTTTA+TGG | - | chr6.1:73362014-73362033 | MS.gene05427:intron | 30.0% | |
TAGTTATGGAATGATGTTGT+TGG | - | chr6.1:73361838-73361857 | MS.gene05427:intron | 30.0% | |
TCAATCACTTTACTCATTGT+AGG | + | chr6.1:73362067-73362086 | None:intergenic | 30.0% | |
TGAGTTATACTTTCCACATT+GGG | - | chr6.1:73361913-73361932 | MS.gene05427:intron | 30.0% | |
TTGAATTCATCCAAAGGAAA+CGG | - | chr6.1:73361354-73361373 | MS.gene05427:CDS | 30.0% | |
! | AGTCCAAAATCTGAAATCTT+TGG | + | chr6.1:73361692-73361711 | None:intergenic | 30.0% |
! | TGTCCAAAGATTTCAGATTT+TGG | - | chr6.1:73361686-73361705 | MS.gene05427:intron | 30.0% |
!!! | CTTCTTGGATTTTGTTTTGA+AGG | - | chr6.1:73361438-73361457 | MS.gene05427:CDS | 30.0% |
AAATTCTTCACCGTTTCCTT+TGG | + | chr6.1:73361367-73361386 | None:intergenic | 35.0% | |
AGACAATTGCATCTTTGAGT+TGG | - | chr6.1:73361539-73361558 | MS.gene05427:CDS | 35.0% | |
ATGATGTTGTTGGAAATGGT+TGG | - | chr6.1:73361848-73361867 | MS.gene05427:intron | 35.0% | |
ATTTCGATGTCAGATCAAAG+AGG | - | chr6.1:73361743-73361762 | MS.gene05427:intron | 35.0% | |
CGGTGAAGAATTTATTAACG+AGG | - | chr6.1:73361374-73361393 | MS.gene05427:CDS | 35.0% | |
CTGAGTTATACTTTCCACAT+TGG | - | chr6.1:73361912-73361931 | MS.gene05427:intron | 35.0% | |
GAATCTGATATTGACCTAGT+AGG | + | chr6.1:73362148-73362167 | None:intergenic | 35.0% | |
TCAAGGTTAAACTTGGTCAA+GGG | - | chr6.1:73361271-73361290 | MS.gene05427:CDS | 35.0% | |
TCAGATCAAAGAGGGATAAT+GGG | - | chr6.1:73361752-73361771 | MS.gene05427:intron | 35.0% | |
TGGAATGATGTTGTTGGAAA+TGG | - | chr6.1:73361844-73361863 | MS.gene05427:intron | 35.0% | |
TTCAAGGTTAAACTTGGTCA+AGG | - | chr6.1:73361270-73361289 | MS.gene05427:CDS | 35.0% | |
TTCCACATTGGGTATACAAT+AGG | - | chr6.1:73361924-73361943 | MS.gene05427:intron | 35.0% | |
TTTCGATGTCAGATCAAAGA+GGG | - | chr6.1:73361744-73361763 | MS.gene05427:intron | 35.0% | |
! | GACAATTGCATCTTTGAGTT+GGG | - | chr6.1:73361540-73361559 | MS.gene05427:CDS | 35.0% |
AAGGTTAAACTTGGTCAAGG+GGG | - | chr6.1:73361273-73361292 | MS.gene05427:CDS | 40.0% | |
AGCCTATTGTATACCCAATG+TGG | + | chr6.1:73361929-73361948 | None:intergenic | 40.0% | |
ATGTTGTTGGAAATGGTTGG+AGG | - | chr6.1:73361851-73361870 | MS.gene05427:intron | 40.0% | |
CAAGGTTAAACTTGGTCAAG+GGG | - | chr6.1:73361272-73361291 | MS.gene05427:CDS | 40.0% | |
CATTGCTTTCTTCTCCTACT+AGG | - | chr6.1:73362131-73362150 | MS.gene05427:CDS | 40.0% | |
CTAGTAGGAGAAGAAAGCAA+TGG | + | chr6.1:73362133-73362152 | None:intergenic | 40.0% | |
CTCATTGTAGGTCTATCACT+TGG | + | chr6.1:73362055-73362074 | None:intergenic | 40.0% | |
GGTGACAACATTAACATGTG+AGG | + | chr6.1:73361418-73361437 | None:intergenic | 40.0% | |
GTATACAATAGGCTAGAGCT+TGG | - | chr6.1:73361935-73361954 | MS.gene05427:intron | 40.0% | |
GTCAGATCAAAGAGGGATAA+TGG | - | chr6.1:73361751-73361770 | MS.gene05427:intron | 40.0% | |
GTGTGGAATAGATATTTCGG+AGG | - | chr6.1:73361791-73361810 | MS.gene05427:intron | 40.0% | |
GTTAATGTTGTCACCCTTCT+TGG | - | chr6.1:73361423-73361442 | MS.gene05427:CDS | 40.0% | |
TGTTGTTGGAAATGGTTGGA+GGG | - | chr6.1:73361852-73361871 | MS.gene05427:intron | 40.0% | |
! | GGAGAAGAAAGCAATGGTTT+TGG | + | chr6.1:73362127-73362146 | None:intergenic | 40.0% |
!! | TCAAAGAGGGATAATGGGAT+AGG | - | chr6.1:73361757-73361776 | MS.gene05427:intron | 40.0% |
!!! | GAAGAAAGCAATGGTTTTGG+TGG | + | chr6.1:73362124-73362143 | None:intergenic | 40.0% |
!!! | GGTTTTGGTGTTGTGTACAA+AGG | - | chr6.1:73361294-73361313 | MS.gene05427:CDS | 40.0% |
ATTGCAAAAGGGATAGCTCG+TGG | - | chr6.1:73361577-73361596 | MS.gene05427:CDS | 45.0% | |
CAGAAGAAGATGAGATCGCA+AGG | - | chr6.1:73361990-73362009 | MS.gene05427:intron | 45.0% | |
TCTGTATCCATAACCCCATC+AGG | + | chr6.1:73361974-73361993 | None:intergenic | 45.0% | |
! | AAACTTGGTCAAGGGGGTTT+TGG | - | chr6.1:73361279-73361298 | MS.gene05427:CDS | 45.0% |
! | CACTAATCTGAGACCTGATG+GGG | - | chr6.1:73361958-73361977 | MS.gene05427:intron | 45.0% |
! | GCACTAATCTGAGACCTGAT+GGG | - | chr6.1:73361957-73361976 | MS.gene05427:intron | 45.0% |
! | GGACTAGAGTACTTGCATAG+AGG | - | chr6.1:73361598-73361617 | MS.gene05427:CDS | 45.0% |
GATAGGTAGCTCCAGAAGTG+TGG | - | chr6.1:73361774-73361793 | MS.gene05427:intron | 50.0% | |
TGTTGGAAATGGTTGGAGGG+AGG | - | chr6.1:73361855-73361874 | MS.gene05427:intron | 50.0% | |
! | GGCACTAATCTGAGACCTGA+TGG | - | chr6.1:73361956-73361975 | MS.gene05427:intron | 50.0% |
! | TCTGAGACCTGATGGGGTTA+TGG | - | chr6.1:73361964-73361983 | MS.gene05427:intron | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 73361258 | 73362180 | 73361258 | ID=MS.gene05427 |
chr6.1 | mRNA | 73361258 | 73362180 | 73361258 | ID=MS.gene05427.t1;Parent=MS.gene05427 |
chr6.1 | exon | 73362043 | 73362180 | 73362043 | ID=MS.gene05427.t1.exon1;Parent=MS.gene05427.t1 |
chr6.1 | CDS | 73362043 | 73362180 | 73362043 | ID=cds.MS.gene05427.t1;Parent=MS.gene05427.t1 |
chr6.1 | exon | 73361258 | 73361659 | 73361258 | ID=MS.gene05427.t1.exon2;Parent=MS.gene05427.t1 |
chr6.1 | CDS | 73361258 | 73361659 | 73361258 | ID=cds.MS.gene05427.t1;Parent=MS.gene05427.t1 |
Gene Sequence |
Protein sequence |