Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73763.t1 | PNX90329.1 | 89.7 | 282 | 26 | 2 | 1 | 282 | 5 | 283 | 3.90E-131 | 477.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73763.t1 | Q94KL8 | 54.2 | 262 | 118 | 2 | 8 | 267 | 13 | 274 | 4.0e-76 | 286.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73763.t1 | A0A2K3MHV1 | 89.7 | 282 | 26 | 2 | 1 | 282 | 5 | 283 | 2.8e-131 | 477.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04984 | MS.gene73763 | 0.811971 | 5.36E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene73763 | 0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene73763 | 0.815322 | 9.81E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73763.t1 | MTR_7g105580 | 76.030 | 267 | 45 | 2 | 1 | 267 | 1 | 248 | 1.57e-140 | 396 |
| MS.gene73763.t1 | MTR_7g105590 | 96.891 | 193 | 5 | 1 | 1 | 193 | 1 | 192 | 7.93e-134 | 377 |
| MS.gene73763.t1 | MTR_4g052350 | 56.641 | 256 | 108 | 1 | 7 | 262 | 12 | 264 | 3.00e-94 | 279 |
| MS.gene73763.t1 | MTR_4g052300 | 55.686 | 255 | 110 | 1 | 8 | 262 | 7 | 258 | 2.54e-92 | 274 |
| MS.gene73763.t1 | MTR_7g105460 | 54.510 | 255 | 116 | 0 | 8 | 262 | 12 | 266 | 3.57e-92 | 274 |
| MS.gene73763.t1 | MTR_4g052340 | 53.696 | 257 | 116 | 1 | 7 | 263 | 12 | 265 | 2.23e-91 | 272 |
| MS.gene73763.t1 | MTR_7g071680 | 51.292 | 271 | 112 | 3 | 7 | 258 | 27 | 296 | 8.07e-90 | 269 |
| MS.gene73763.t1 | MTR_4g052320 | 54.118 | 255 | 115 | 1 | 8 | 262 | 7 | 259 | 4.85e-89 | 266 |
| MS.gene73763.t1 | MTR_7g107670 | 47.232 | 271 | 136 | 3 | 1 | 265 | 25 | 294 | 3.37e-79 | 242 |
| MS.gene73763.t1 | MTR_7g110130 | 47.148 | 263 | 138 | 1 | 7 | 268 | 4 | 266 | 8.19e-77 | 234 |
| MS.gene73763.t1 | MTR_6g023590 | 42.629 | 251 | 142 | 2 | 8 | 256 | 12 | 262 | 2.58e-72 | 223 |
| MS.gene73763.t1 | MTR_7g083870 | 44.649 | 271 | 142 | 4 | 2 | 265 | 28 | 297 | 3.44e-71 | 221 |
| MS.gene73763.t1 | MTR_2g090165 | 45.247 | 263 | 142 | 2 | 7 | 268 | 4 | 265 | 3.76e-69 | 215 |
| MS.gene73763.t1 | MTR_3g020670 | 45.247 | 263 | 137 | 3 | 7 | 262 | 14 | 276 | 1.34e-68 | 214 |
| MS.gene73763.t1 | MTR_7g110160 | 45.276 | 254 | 119 | 2 | 7 | 259 | 4 | 238 | 5.82e-67 | 209 |
| MS.gene73763.t1 | MTR_4g078630 | 43.609 | 266 | 137 | 5 | 7 | 262 | 17 | 279 | 7.55e-67 | 210 |
| MS.gene73763.t1 | MTR_6g023610 | 42.857 | 252 | 142 | 2 | 6 | 255 | 10 | 261 | 9.88e-66 | 206 |
| MS.gene73763.t1 | MTR_6g023950 | 43.028 | 251 | 141 | 2 | 8 | 256 | 12 | 262 | 2.20e-65 | 205 |
| MS.gene73763.t1 | MTR_6g023990 | 40.637 | 251 | 147 | 2 | 8 | 256 | 13 | 263 | 5.95e-65 | 204 |
| MS.gene73763.t1 | MTR_7g110140 | 44.800 | 250 | 136 | 2 | 8 | 256 | 5 | 253 | 1.33e-64 | 203 |
| MS.gene73763.t1 | MTR_6g023910 | 41.600 | 250 | 144 | 2 | 8 | 255 | 12 | 261 | 8.10e-64 | 201 |
| MS.gene73763.t1 | MTR_6g023600 | 40.637 | 251 | 147 | 2 | 8 | 256 | 12 | 262 | 6.21e-63 | 199 |
| MS.gene73763.t1 | MTR_7g105570 | 42.023 | 257 | 98 | 1 | 6 | 262 | 18 | 223 | 5.93e-60 | 190 |
| MS.gene73763.t1 | MTR_6g035395 | 41.339 | 254 | 134 | 3 | 7 | 259 | 3 | 242 | 4.48e-59 | 189 |
| MS.gene73763.t1 | MTR_6g023600 | 39.841 | 251 | 143 | 3 | 8 | 256 | 12 | 256 | 4.03e-58 | 187 |
| MS.gene73763.t1 | MTR_4g084800 | 61.940 | 134 | 51 | 0 | 5 | 138 | 9 | 142 | 8.36e-54 | 172 |
| MS.gene73763.t1 | MTR_3g113870 | 47.959 | 196 | 94 | 2 | 17 | 212 | 29 | 216 | 2.97e-53 | 173 |
| MS.gene73763.t1 | MTR_3g085740 | 29.020 | 255 | 164 | 8 | 7 | 254 | 73 | 317 | 4.40e-26 | 105 |
| MS.gene73763.t1 | MTR_7g113650 | 29.070 | 258 | 164 | 8 | 8 | 254 | 39 | 288 | 1.08e-25 | 103 |
| MS.gene73763.t1 | MTR_7g094510 | 29.924 | 264 | 166 | 5 | 1 | 255 | 1 | 254 | 1.02e-24 | 99.8 |
| MS.gene73763.t1 | MTR_8g442750 | 31.970 | 269 | 158 | 8 | 9 | 262 | 14 | 272 | 1.66e-24 | 100 |
| MS.gene73763.t1 | MTR_4g132850 | 28.958 | 259 | 167 | 7 | 5 | 257 | 3 | 250 | 7.95e-24 | 97.4 |
| MS.gene73763.t1 | MTR_4g058840 | 30.827 | 266 | 173 | 7 | 9 | 266 | 11 | 273 | 1.24e-23 | 97.4 |
| MS.gene73763.t1 | MTR_4g058820 | 30.827 | 266 | 173 | 7 | 9 | 266 | 11 | 273 | 1.24e-23 | 97.4 |
| MS.gene73763.t1 | MTR_1g051165 | 28.467 | 274 | 178 | 8 | 7 | 266 | 12 | 281 | 1.71e-23 | 97.1 |
| MS.gene73763.t1 | MTR_1g082760 | 29.845 | 258 | 162 | 7 | 8 | 254 | 39 | 288 | 2.67e-23 | 97.1 |
| MS.gene73763.t1 | MTR_4g058810 | 30.075 | 266 | 175 | 7 | 9 | 266 | 11 | 273 | 9.57e-23 | 95.1 |
| MS.gene73763.t1 | MTR_7g094520 | 28.063 | 253 | 172 | 3 | 9 | 255 | 11 | 259 | 2.99e-22 | 93.2 |
| MS.gene73763.t1 | MTR_1196s0010 | 29.688 | 256 | 159 | 6 | 7 | 255 | 272 | 513 | 8.51e-22 | 95.1 |
| MS.gene73763.t1 | MTR_4g131740 | 31.225 | 253 | 153 | 10 | 8 | 247 | 39 | 283 | 1.23e-21 | 92.4 |
| MS.gene73763.t1 | MTR_3g068065 | 28.287 | 251 | 172 | 5 | 9 | 256 | 17 | 262 | 2.36e-21 | 91.3 |
| MS.gene73763.t1 | MTR_3g068070 | 26.792 | 265 | 184 | 6 | 2 | 261 | 6 | 265 | 2.54e-21 | 90.9 |
| MS.gene73763.t1 | MTR_7g063320 | 28.854 | 253 | 170 | 6 | 9 | 255 | 15 | 263 | 4.51e-21 | 90.1 |
| MS.gene73763.t1 | MTR_3g068175 | 28.906 | 256 | 164 | 9 | 9 | 256 | 17 | 262 | 1.12e-20 | 89.4 |
| MS.gene73763.t1 | MTR_3g068085 | 26.984 | 252 | 174 | 7 | 9 | 256 | 15 | 260 | 4.99e-20 | 87.4 |
| MS.gene73763.t1 | MTR_1g068955 | 30.385 | 260 | 140 | 11 | 9 | 246 | 14 | 254 | 9.25e-20 | 87.0 |
| MS.gene73763.t1 | MTR_4g064887 | 26.953 | 256 | 169 | 8 | 9 | 256 | 15 | 260 | 3.64e-19 | 85.1 |
| MS.gene73763.t1 | MTR_3g068155 | 27.626 | 257 | 174 | 8 | 6 | 256 | 14 | 264 | 3.68e-19 | 85.1 |
| MS.gene73763.t1 | MTR_8g096580 | 30.570 | 193 | 123 | 4 | 9 | 195 | 45 | 232 | 8.30e-19 | 85.1 |
| MS.gene73763.t1 | MTR_3g068175 | 28.462 | 260 | 164 | 10 | 9 | 256 | 17 | 266 | 1.32e-18 | 83.6 |
| MS.gene73763.t1 | MTR_7g063360 | 27.273 | 253 | 176 | 6 | 9 | 256 | 16 | 265 | 1.40e-18 | 83.6 |
| MS.gene73763.t1 | MTR_7g063390 | 26.378 | 254 | 177 | 6 | 9 | 256 | 16 | 265 | 4.17e-18 | 82.0 |
| MS.gene73763.t1 | MTR_7g063260 | 26.692 | 266 | 181 | 7 | 1 | 257 | 6 | 266 | 9.78e-18 | 81.3 |
| MS.gene73763.t1 | MTR_7g105560 | 63.793 | 58 | 21 | 0 | 5 | 62 | 9 | 66 | 1.80e-17 | 77.8 |
| MS.gene73763.t1 | MTR_7g063270 | 25.758 | 264 | 185 | 6 | 1 | 257 | 6 | 265 | 1.85e-17 | 80.5 |
| MS.gene73763.t1 | MTR_4g064883 | 26.641 | 259 | 180 | 7 | 9 | 263 | 14 | 266 | 2.71e-17 | 80.1 |
| MS.gene73763.t1 | MTR_7g063330 | 26.378 | 254 | 178 | 6 | 9 | 257 | 15 | 264 | 6.40e-17 | 79.0 |
| MS.gene73763.t1 | MTR_4g097510 | 27.451 | 204 | 137 | 4 | 10 | 212 | 3 | 196 | 7.40e-17 | 79.0 |
| MS.gene73763.t1 | MTR_4g064887 | 28.497 | 193 | 131 | 5 | 9 | 197 | 15 | 204 | 5.86e-16 | 75.5 |
| MS.gene73763.t1 | MTR_8g096620 | 27.957 | 186 | 128 | 4 | 11 | 193 | 47 | 229 | 1.23e-15 | 76.3 |
| MS.gene73763.t1 | MTR_7g080410 | 30.928 | 194 | 125 | 4 | 9 | 195 | 38 | 229 | 1.55e-15 | 75.9 |
| MS.gene73763.t1 | MTR_7g080410 | 30.928 | 194 | 125 | 4 | 9 | 195 | 38 | 229 | 1.82e-15 | 75.1 |
| MS.gene73763.t1 | MTR_8g044240 | 26.961 | 204 | 140 | 3 | 15 | 209 | 75 | 278 | 1.19e-13 | 70.5 |
| MS.gene73763.t1 | MTR_3g087850 | 28.962 | 183 | 122 | 4 | 13 | 193 | 30 | 206 | 2.70e-13 | 68.9 |
| MS.gene73763.t1 | MTR_6g088500 | 25.688 | 218 | 136 | 5 | 15 | 209 | 184 | 398 | 3.91e-13 | 69.7 |
| MS.gene73763.t1 | MTR_4g064883 | 27.835 | 194 | 133 | 5 | 9 | 198 | 14 | 204 | 5.72e-13 | 67.0 |
| MS.gene73763.t1 | MTR_6g088500 | 26.570 | 207 | 126 | 5 | 15 | 198 | 184 | 387 | 7.92e-13 | 68.2 |
| MS.gene73763.t1 | MTR_4g134660 | 29.327 | 208 | 138 | 7 | 6 | 207 | 3 | 207 | 4.62e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73763.t1 | AT3G51680 | 50.562 | 267 | 116 | 4 | 7 | 257 | 30 | 296 | 1.91e-78 | 240 |
| MS.gene73763.t1 | AT3G29250 | 46.538 | 260 | 135 | 4 | 6 | 263 | 3 | 260 | 8.88e-73 | 224 |
| MS.gene73763.t1 | AT1G52340 | 45.113 | 266 | 136 | 3 | 7 | 262 | 16 | 281 | 1.24e-72 | 224 |
| MS.gene73763.t1 | AT4G03140 | 47.656 | 256 | 128 | 2 | 7 | 257 | 76 | 330 | 2.46e-72 | 226 |
| MS.gene73763.t1 | AT3G29250 | 46.538 | 260 | 135 | 4 | 6 | 263 | 39 | 296 | 4.50e-72 | 224 |
| MS.gene73763.t1 | AT3G26770 | 45.703 | 256 | 132 | 3 | 7 | 256 | 39 | 293 | 1.78e-71 | 222 |
| MS.gene73763.t1 | AT2G47140 | 44.444 | 252 | 138 | 2 | 6 | 256 | 3 | 253 | 4.85e-71 | 219 |
| MS.gene73763.t1 | AT2G47130 | 46.245 | 253 | 131 | 4 | 6 | 256 | 3 | 252 | 8.08e-71 | 219 |
| MS.gene73763.t1 | AT3G29250 | 46.304 | 257 | 134 | 4 | 9 | 263 | 44 | 298 | 1.50e-70 | 220 |
| MS.gene73763.t1 | AT2G47120 | 42.802 | 257 | 143 | 4 | 6 | 261 | 3 | 256 | 6.01e-69 | 214 |
| MS.gene73763.t1 | AT2G47120 | 42.745 | 255 | 142 | 4 | 8 | 261 | 6 | 257 | 1.58e-68 | 213 |
| MS.gene73763.t1 | AT3G29260 | 43.191 | 257 | 143 | 3 | 6 | 261 | 3 | 257 | 4.37e-68 | 212 |
| MS.gene73763.t1 | AT3G26760 | 43.411 | 258 | 137 | 3 | 7 | 256 | 34 | 290 | 8.30e-66 | 207 |
| MS.gene73763.t1 | AT3G42960 | 42.910 | 268 | 137 | 8 | 7 | 262 | 6 | 269 | 1.17e-55 | 181 |
| MS.gene73763.t1 | AT5G18210 | 33.333 | 261 | 151 | 8 | 9 | 255 | 8 | 259 | 4.00e-26 | 103 |
| MS.gene73763.t1 | AT3G03980 | 31.538 | 260 | 161 | 4 | 9 | 255 | 14 | 269 | 6.27e-26 | 103 |
| MS.gene73763.t1 | AT2G47150 | 29.435 | 248 | 120 | 6 | 9 | 255 | 1 | 194 | 9.33e-25 | 98.6 |
| MS.gene73763.t1 | AT1G54870 | 31.579 | 209 | 129 | 5 | 8 | 206 | 81 | 285 | 5.33e-24 | 99.8 |
| MS.gene73763.t1 | AT1G54870 | 31.579 | 209 | 129 | 5 | 8 | 206 | 83 | 287 | 5.71e-24 | 99.8 |
| MS.gene73763.t1 | AT3G04000 | 30.000 | 260 | 164 | 6 | 9 | 254 | 14 | 269 | 6.63e-24 | 98.2 |
| MS.gene73763.t1 | AT5G18210 | 31.741 | 293 | 165 | 11 | 1 | 279 | 1 | 272 | 1.70e-22 | 94.4 |
| MS.gene73763.t1 | AT3G05260 | 29.070 | 258 | 163 | 8 | 8 | 254 | 36 | 284 | 3.53e-22 | 94.0 |
| MS.gene73763.t1 | AT1G63380 | 27.985 | 268 | 179 | 7 | 9 | 266 | 15 | 278 | 9.43e-22 | 92.4 |
| MS.gene73763.t1 | AT1G63380 | 27.985 | 268 | 179 | 7 | 9 | 266 | 17 | 280 | 9.74e-22 | 92.4 |
| MS.gene73763.t1 | AT1G63380 | 27.985 | 268 | 179 | 7 | 9 | 266 | 19 | 282 | 1.20e-21 | 92.4 |
| MS.gene73763.t1 | AT1G63380 | 27.985 | 268 | 179 | 7 | 9 | 266 | 22 | 285 | 1.25e-21 | 92.4 |
| MS.gene73763.t1 | AT5G06060 | 27.519 | 258 | 177 | 6 | 9 | 262 | 9 | 260 | 1.50e-21 | 91.7 |
| MS.gene73763.t1 | AT2G29340 | 27.481 | 262 | 172 | 7 | 9 | 262 | 7 | 258 | 1.62e-21 | 91.7 |
| MS.gene73763.t1 | AT2G17845 | 27.372 | 274 | 175 | 9 | 9 | 266 | 47 | 312 | 2.98e-21 | 91.7 |
| MS.gene73763.t1 | AT2G29340 | 27.481 | 262 | 172 | 7 | 9 | 262 | 7 | 258 | 3.68e-21 | 91.3 |
| MS.gene73763.t1 | AT3G12800 | 31.801 | 261 | 154 | 11 | 9 | 254 | 10 | 261 | 5.36e-21 | 90.9 |
| MS.gene73763.t1 | AT1G62610 | 27.715 | 267 | 181 | 7 | 9 | 266 | 14 | 277 | 9.01e-21 | 89.7 |
| MS.gene73763.t1 | AT1G62610 | 27.715 | 267 | 181 | 7 | 9 | 266 | 19 | 282 | 9.27e-21 | 89.7 |
| MS.gene73763.t1 | AT1G62610 | 27.715 | 267 | 181 | 7 | 9 | 266 | 13 | 276 | 9.62e-21 | 89.7 |
| MS.gene73763.t1 | AT1G62610 | 27.715 | 267 | 181 | 7 | 9 | 266 | 15 | 278 | 1.02e-20 | 89.7 |
| MS.gene73763.t1 | AT2G29310 | 26.692 | 266 | 169 | 6 | 9 | 262 | 7 | 258 | 2.72e-20 | 88.2 |
| MS.gene73763.t1 | AT1G07440 | 27.519 | 258 | 176 | 6 | 9 | 262 | 12 | 262 | 7.09e-20 | 87.0 |
| MS.gene73763.t1 | AT3G55310 | 27.820 | 266 | 181 | 6 | 9 | 266 | 17 | 279 | 9.22e-20 | 87.0 |
| MS.gene73763.t1 | AT2G29330 | 26.437 | 261 | 176 | 6 | 9 | 262 | 7 | 258 | 1.16e-19 | 86.3 |
| MS.gene73763.t1 | AT4G13180 | 29.134 | 254 | 168 | 6 | 9 | 255 | 13 | 261 | 2.90e-19 | 85.5 |
| MS.gene73763.t1 | AT4G05530 | 28.137 | 263 | 172 | 7 | 1 | 257 | 1 | 252 | 5.29e-19 | 84.3 |
| MS.gene73763.t1 | AT3G55290 | 27.068 | 266 | 183 | 6 | 9 | 266 | 18 | 280 | 9.84e-19 | 84.3 |
| MS.gene73763.t1 | AT2G30670 | 27.203 | 261 | 174 | 6 | 9 | 262 | 7 | 258 | 1.05e-18 | 84.0 |
| MS.gene73763.t1 | AT3G55290 | 27.068 | 266 | 183 | 6 | 9 | 266 | 17 | 279 | 1.10e-18 | 84.0 |
| MS.gene73763.t1 | AT5G50600 | 28.426 | 197 | 133 | 5 | 1 | 193 | 37 | 229 | 2.03e-18 | 84.3 |
| MS.gene73763.t1 | AT5G50700 | 28.426 | 197 | 133 | 5 | 1 | 193 | 37 | 229 | 2.03e-18 | 84.3 |
| MS.gene73763.t1 | AT2G29340 | 29.146 | 199 | 134 | 5 | 9 | 203 | 7 | 202 | 3.85e-18 | 80.9 |
| MS.gene73763.t1 | AT2G29340 | 29.146 | 199 | 134 | 5 | 9 | 203 | 7 | 202 | 3.85e-18 | 80.9 |
| MS.gene73763.t1 | AT3G46170 | 28.195 | 266 | 180 | 6 | 9 | 266 | 26 | 288 | 8.00e-18 | 81.6 |
| MS.gene73763.t1 | AT1G24360 | 26.459 | 257 | 172 | 9 | 7 | 256 | 72 | 318 | 3.62e-17 | 80.5 |
| MS.gene73763.t1 | AT2G29360 | 26.459 | 257 | 181 | 6 | 9 | 262 | 16 | 267 | 5.48e-17 | 79.3 |
| MS.gene73763.t1 | AT2G29320 | 26.336 | 262 | 176 | 6 | 9 | 262 | 13 | 265 | 6.90e-17 | 79.0 |
| MS.gene73763.t1 | AT5G50690 | 31.053 | 190 | 125 | 5 | 7 | 193 | 43 | 229 | 7.67e-17 | 78.6 |
| MS.gene73763.t1 | AT5G50590 | 31.053 | 190 | 125 | 5 | 7 | 193 | 43 | 229 | 7.67e-17 | 78.6 |
| MS.gene73763.t1 | AT5G50690 | 31.053 | 190 | 125 | 5 | 7 | 193 | 43 | 229 | 1.74e-16 | 78.2 |
| MS.gene73763.t1 | AT5G50590 | 31.053 | 190 | 125 | 5 | 7 | 193 | 43 | 229 | 1.74e-16 | 78.2 |
| MS.gene73763.t1 | AT2G29310 | 28.646 | 192 | 132 | 3 | 9 | 197 | 7 | 196 | 4.75e-16 | 75.1 |
| MS.gene73763.t1 | AT3G03330 | 30.476 | 210 | 135 | 5 | 9 | 211 | 41 | 246 | 5.54e-16 | 77.0 |
| MS.gene73763.t1 | AT1G10310 | 30.457 | 197 | 134 | 3 | 12 | 207 | 18 | 212 | 6.37e-16 | 75.9 |
| MS.gene73763.t1 | AT2G29150 | 26.459 | 257 | 180 | 6 | 9 | 262 | 16 | 266 | 6.61e-16 | 76.3 |
| MS.gene73763.t1 | AT3G47350 | 28.311 | 219 | 138 | 7 | 11 | 223 | 46 | 251 | 6.95e-16 | 76.6 |
| MS.gene73763.t1 | AT3G47350 | 28.311 | 219 | 138 | 7 | 11 | 223 | 46 | 251 | 1.02e-15 | 76.3 |
| MS.gene73763.t1 | AT1G49670 | 31.364 | 220 | 130 | 7 | 11 | 217 | 6 | 217 | 1.20e-15 | 77.4 |
| MS.gene73763.t1 | AT2G29290 | 26.255 | 259 | 179 | 6 | 9 | 262 | 7 | 258 | 1.39e-15 | 75.1 |
| MS.gene73763.t1 | AT1G49670 | 31.364 | 220 | 130 | 7 | 11 | 217 | 6 | 217 | 1.40e-15 | 77.0 |
| MS.gene73763.t1 | AT2G29300 | 24.521 | 261 | 180 | 6 | 9 | 261 | 7 | 258 | 4.00e-15 | 73.9 |
| MS.gene73763.t1 | AT5G10050 | 28.718 | 195 | 131 | 4 | 10 | 202 | 6 | 194 | 4.07e-15 | 73.9 |
| MS.gene73763.t1 | AT1G07450 | 27.132 | 258 | 177 | 7 | 9 | 262 | 8 | 258 | 4.38e-15 | 73.6 |
| MS.gene73763.t1 | AT2G29300 | 24.000 | 275 | 187 | 7 | 9 | 270 | 7 | 272 | 4.99e-15 | 73.9 |
| MS.gene73763.t1 | AT2G29370 | 27.519 | 258 | 177 | 8 | 9 | 262 | 16 | 267 | 6.25e-15 | 73.6 |
| MS.gene73763.t1 | AT2G29350 | 27.519 | 258 | 176 | 6 | 9 | 262 | 15 | 265 | 1.26e-14 | 72.4 |
| MS.gene73763.t1 | AT2G29260 | 26.087 | 253 | 175 | 6 | 9 | 256 | 68 | 313 | 2.07e-14 | 72.4 |
| MS.gene73763.t1 | AT5G65205 | 30.108 | 186 | 122 | 4 | 10 | 193 | 7 | 186 | 1.80e-13 | 69.3 |
| MS.gene73763.t1 | AT2G29310 | 24.681 | 235 | 161 | 5 | 35 | 262 | 31 | 256 | 3.77e-13 | 68.2 |
| MS.gene73763.t1 | AT5G04900 | 29.534 | 193 | 126 | 4 | 15 | 198 | 83 | 274 | 8.93e-13 | 68.2 |
| MS.gene73763.t1 | AT3G47360 | 28.351 | 194 | 127 | 6 | 12 | 199 | 48 | 235 | 2.49e-12 | 66.2 |
| MS.gene73763.t1 | AT2G29350 | 29.688 | 192 | 130 | 3 | 9 | 197 | 15 | 204 | 2.94e-12 | 65.1 |
| MS.gene73763.t1 | AT2G29320 | 28.272 | 191 | 131 | 4 | 9 | 195 | 13 | 201 | 3.38e-12 | 64.7 |
| MS.gene73763.t1 | AT4G10020 | 26.630 | 184 | 123 | 5 | 9 | 185 | 47 | 225 | 2.54e-11 | 63.9 |
| MS.gene73763.t1 | AT5G50770 | 27.041 | 196 | 131 | 4 | 4 | 193 | 40 | 229 | 5.03e-11 | 62.8 |
Find 47 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTTGATGTTAATGTTTA+TGG | 0.126315 | 7.3:-25398890 | MS.gene73763:CDS |
| TCTTCCATGGCTTCAATTAT+TGG | 0.161831 | 7.3:-25399318 | None:intergenic |
| AAGAATTTGTGTGTAGAATT+AGG | 0.223231 | 7.3:-25398719 | MS.gene73763:CDS |
| GATACCGTAGTTTCGAATTA+TGG | 0.242135 | 7.3:-25399001 | MS.gene73763:CDS |
| TGTGTAGAATTAGGACAATA+TGG | 0.323778 | 7.3:-25398710 | MS.gene73763:CDS |
| TAATGTTTATGGAGCTTTCT+TGG | 0.326854 | 7.3:-25398879 | MS.gene73763:CDS |
| TTCAGTGCATTGGTTAGAAT+TGG | 0.330425 | 7.3:+25398647 | None:intergenic |
| GAATGGAGTCAACTTTGTTT+TGG | 0.335482 | 7.3:-25398501 | MS.gene73763:CDS |
| CTCTCTTTGTGCAGGCTTGA+AGG | 0.373704 | 7.3:-25399223 | MS.gene73763:intron |
| ACAGGAGGTGCTAGTGGAAT+TGG | 0.390234 | 7.3:-25399184 | MS.gene73763:CDS |
| CAATCCCTTTGCAATGAACT+TGG | 0.395230 | 7.3:-25399088 | MS.gene73763:CDS |
| AATGTTTATGGAGCTTTCTT+GGG | 0.395810 | 7.3:-25398878 | MS.gene73763:CDS |
| TATCATAATTTAATATTTCA+CGG | 0.396520 | 7.3:+25398930 | None:intergenic |
| AAATGTTTGATGAATGGTTA+TGG | 0.429070 | 7.3:-25398431 | MS.gene73763:CDS |
| CTTGCTCATATTCAGTGCAT+TGG | 0.444696 | 7.3:+25398637 | None:intergenic |
| ATGATAGCGAAGCTTTCAAA+AGG | 0.448243 | 7.3:-25398913 | MS.gene73763:CDS |
| TGGCTTCAATTATTGGCAAA+AGG | 0.456299 | 7.3:-25399311 | MS.gene73763:intron |
| GACATCATGTTTAACAATGC+TGG | 0.458821 | 7.3:-25398971 | MS.gene73763:CDS |
| GAATATGAGCAAGAGTGAAA+TGG | 0.461483 | 7.3:-25398627 | MS.gene73763:CDS |
| TCTTCCAAGTTCATTGCAAA+GGG | 0.463133 | 7.3:+25399084 | None:intergenic |
| TTCTTCCAAGTTCATTGCAA+AGG | 0.472083 | 7.3:+25399083 | None:intergenic |
| GATGCTTCAAAGTTTGTGAA+TGG | 0.492301 | 7.3:-25398518 | MS.gene73763:CDS |
| TGCAGAAGTGAATGACATAT+TGG | 0.498711 | 7.3:+25398460 | None:intergenic |
| TGGGTGCTAAGCATGCTGCT+AGG | 0.498748 | 7.3:-25398859 | MS.gene73763:CDS |
| GTGTAGAATTAGGACAATAT+GGG | 0.500905 | 7.3:-25398709 | MS.gene73763:CDS |
| GGGTGCTAAGCATGCTGCTA+GGG | 0.521675 | 7.3:-25398858 | MS.gene73763:CDS |
| AGAGGCTATTCTTGAAGTTG+AGG | 0.532968 | 7.3:-25398573 | MS.gene73763:CDS |
| CTACTGATCAATGTGCTTGG+TGG | 0.533586 | 7.3:+25398406 | None:intergenic |
| TTTGCCAATAATTGAAGCCA+TGG | 0.539515 | 7.3:+25399314 | None:intergenic |
| TTCTTCAAAGCATGCATCAG+TGG | 0.545758 | 7.3:-25398750 | MS.gene73763:CDS |
| GGTAAAGTAGCAATAATCAC+AGG | 0.547973 | 7.3:-25399202 | MS.gene73763:CDS |
| TCTTCAAAGCATGCATCAGT+GGG | 0.552690 | 7.3:-25398749 | MS.gene73763:CDS |
| TTACTACTGATCAATGTGCT+TGG | 0.561074 | 7.3:+25398403 | None:intergenic |
| ATAATCACAGGAGGTGCTAG+TGG | 0.563533 | 7.3:-25399190 | MS.gene73763:CDS |
| GCAGATATTCAAGATGAAGT+AGG | 0.564586 | 7.3:-25399112 | MS.gene73763:CDS |
| CTCAGTTGGTGTGTTGAAAG+AGG | 0.576270 | 7.3:-25398591 | MS.gene73763:CDS |
| TGATAGCGAAGCTTTCAAAA+GGG | 0.590961 | 7.3:-25398912 | MS.gene73763:CDS |
| CTTACCATAATTCGAAACTA+CGG | 0.593414 | 7.3:+25398997 | None:intergenic |
| GCATTGGTTAGAATTGGAGT+AGG | 0.601696 | 7.3:+25398653 | None:intergenic |
| ATTGGAGTAGGAATAGCTCC+TGG | 0.611949 | 7.3:+25398665 | None:intergenic |
| AAAGTGAATTGTATCTCACC+AGG | 0.618157 | 7.3:-25398683 | MS.gene73763:CDS |
| CTCTTTCAACACACCAACTG+AGG | 0.623548 | 7.3:+25398592 | None:intergenic |
| TGAAGTTGAGGATATAGCTG+AGG | 0.641258 | 7.3:-25398561 | MS.gene73763:CDS |
| GCTAAACTATTTGTTCAACA+TGG | 0.643126 | 7.3:-25399151 | MS.gene73763:CDS |
| AGTGTTGCTACAGAAACTGC+TGG | 0.652960 | 7.3:-25398794 | MS.gene73763:CDS |
| AGAAGTGAATGACATATTGG+TGG | 0.654410 | 7.3:+25398463 | None:intergenic |
| AAAGTAGCAATAATCACAGG+AGG | 0.676889 | 7.3:-25399199 | MS.gene73763:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATAATTTAATATTTCA+CGG | + | chr7.3:25398791-25398810 | None:intergenic | 10.0% |
| !! | CTTAAAAAATGTTTGATGAA+TGG | - | chr7.3:25399281-25399300 | MS.gene73763:intron | 20.0% |
| !! | GTATTTGATGTTAATGTTTA+TGG | - | chr7.3:25398828-25398847 | MS.gene73763:CDS | 20.0% |
| ! | AAATGTTTGATGAATGGTTA+TGG | - | chr7.3:25399287-25399306 | MS.gene73763:intron | 25.0% |
| ! | AAGAATTTGTGTGTAGAATT+AGG | - | chr7.3:25398999-25399018 | MS.gene73763:CDS | 25.0% |
| ! | TGAATCAGACATAAAAAATG+TGG | - | chr7.3:25398692-25398711 | MS.gene73763:CDS | 25.0% |
| !!! | AGAATAACACCTTTTTTGTT+TGG | + | chr7.3:25398894-25398913 | None:intergenic | 25.0% |
| !!! | GAATAACACCTTTTTTGTTT+GGG | + | chr7.3:25398893-25398912 | None:intergenic | 25.0% |
| AATGTTTATGGAGCTTTCTT+GGG | - | chr7.3:25398840-25398859 | MS.gene73763:CDS | 30.0% | |
| CTTACCATAATTCGAAACTA+CGG | + | chr7.3:25398724-25398743 | None:intergenic | 30.0% | |
| GCTAAACTATTTGTTCAACA+TGG | - | chr7.3:25398567-25398586 | MS.gene73763:CDS | 30.0% | |
| GTAATGATCCCAAACAAAAA+AGG | - | chr7.3:25398882-25398901 | MS.gene73763:CDS | 30.0% | |
| GTGTAGAATTAGGACAATAT+GGG | - | chr7.3:25399009-25399028 | MS.gene73763:CDS | 30.0% | |
| TAATGTTTATGGAGCTTTCT+TGG | - | chr7.3:25398839-25398858 | MS.gene73763:CDS | 30.0% | |
| TGTGTAGAATTAGGACAATA+TGG | - | chr7.3:25399008-25399027 | MS.gene73763:CDS | 30.0% | |
| AAAGTAGCAATAATCACAGG+AGG | - | chr7.3:25398519-25398538 | MS.gene73763:CDS | 35.0% | |
| AAAGTGAATTGTATCTCACC+AGG | - | chr7.3:25399035-25399054 | MS.gene73763:CDS | 35.0% | |
| AGAAGTGAATGACATATTGG+TGG | + | chr7.3:25399258-25399277 | None:intergenic | 35.0% | |
| GAATATGAGCAAGAGTGAAA+TGG | - | chr7.3:25399091-25399110 | MS.gene73763:CDS | 35.0% | |
| GACATCATGTTTAACAATGC+TGG | - | chr7.3:25398747-25398766 | MS.gene73763:CDS | 35.0% | |
| GATACCGTAGTTTCGAATTA+TGG | - | chr7.3:25398717-25398736 | MS.gene73763:CDS | 35.0% | |
| GATGCTTCAAAGTTTGTGAA+TGG | - | chr7.3:25399200-25399219 | MS.gene73763:CDS | 35.0% | |
| GCAGATATTCAAGATGAAGT+AGG | - | chr7.3:25398606-25398625 | MS.gene73763:CDS | 35.0% | |
| GGTAAAGTAGCAATAATCAC+AGG | - | chr7.3:25398516-25398535 | MS.gene73763:CDS | 35.0% | |
| TCTTCCAAGTTCATTGCAAA+GGG | + | chr7.3:25398637-25398656 | None:intergenic | 35.0% | |
| TGCAGAAGTGAATGACATAT+TGG | + | chr7.3:25399261-25399280 | None:intergenic | 35.0% | |
| TGGCTTCAATTATTGGCAAA+AGG | - | chr7.3:25398407-25398426 | MS.gene73763:CDS | 35.0% | |
| TTCTTCCAAGTTCATTGCAA+AGG | + | chr7.3:25398638-25398657 | None:intergenic | 35.0% | |
| ! | ATGATAGCGAAGCTTTCAAA+AGG | - | chr7.3:25398805-25398824 | MS.gene73763:CDS | 35.0% |
| ! | TGATAGCGAAGCTTTCAAAA+GGG | - | chr7.3:25398806-25398825 | MS.gene73763:CDS | 35.0% |
| !! | GAATGGAGTCAACTTTGTTT+TGG | - | chr7.3:25399217-25399236 | MS.gene73763:intron | 35.0% |
| !! | TTCAGTGCATTGGTTAGAAT+TGG | + | chr7.3:25399074-25399093 | None:intergenic | 35.0% |
| AGAGGCTATTCTTGAAGTTG+AGG | - | chr7.3:25399145-25399164 | MS.gene73763:CDS | 40.0% | |
| CAAGTAATCTCTCTTTGTGC+AGG | - | chr7.3:25398487-25398506 | MS.gene73763:CDS | 40.0% | |
| CAATCCCTTTGCAATGAACT+TGG | - | chr7.3:25398630-25398649 | MS.gene73763:CDS | 40.0% | |
| CTTGCTCATATTCAGTGCAT+TGG | + | chr7.3:25399084-25399103 | None:intergenic | 40.0% | |
| GGCAAAAGGTAACTATGTTG+TGG | - | chr7.3:25398421-25398440 | MS.gene73763:CDS | 40.0% | |
| TCTTCAAAGCATGCATCAGT+GGG | - | chr7.3:25398969-25398988 | MS.gene73763:CDS | 40.0% | |
| TGAAGTTGAGGATATAGCTG+AGG | - | chr7.3:25399157-25399176 | MS.gene73763:CDS | 40.0% | |
| TTCTTCAAAGCATGCATCAG+TGG | - | chr7.3:25398968-25398987 | MS.gene73763:CDS | 40.0% | |
| !! | GAGAAAGTTTTGTCCTCAGT+TGG | - | chr7.3:25399113-25399132 | MS.gene73763:CDS | 40.0% |
| !! | GCATTGGTTAGAATTGGAGT+AGG | + | chr7.3:25399068-25399087 | None:intergenic | 40.0% |
| !!! | GGAGTCAACTTTGTTTTGGA+TGG | - | chr7.3:25399221-25399240 | MS.gene73763:intron | 40.0% |
| !!! | GTCAACTTTGTTTTGGATGG+AGG | - | chr7.3:25399224-25399243 | MS.gene73763:intron | 40.0% |
| ATTGGAGTAGGAATAGCTCC+TGG | + | chr7.3:25399056-25399075 | None:intergenic | 45.0% | |
| CTACTGATCAATGTGCTTGG+TGG | + | chr7.3:25399315-25399334 | None:intergenic | 45.0% | |
| CTCTTTCAACACACCAACTG+AGG | + | chr7.3:25399129-25399148 | None:intergenic | 45.0% | |
| ! | AGTGTTGCTACAGAAACTGC+TGG | - | chr7.3:25398924-25398943 | MS.gene73763:CDS | 45.0% |
| ! | CTCAGTTGGTGTGTTGAAAG+AGG | - | chr7.3:25399127-25399146 | MS.gene73763:CDS | 45.0% |
| !! | ATAATCACAGGAGGTGCTAG+TGG | - | chr7.3:25398528-25398547 | MS.gene73763:CDS | 45.0% |
| CTCTCTTTGTGCAGGCTTGA+AGG | - | chr7.3:25398495-25398514 | MS.gene73763:CDS | 50.0% | |
| !! | ACAGGAGGTGCTAGTGGAAT+TGG | - | chr7.3:25398534-25398553 | MS.gene73763:CDS | 50.0% |
| GGGTGCTAAGCATGCTGCTA+GGG | - | chr7.3:25398860-25398879 | MS.gene73763:CDS | 55.0% | |
| TGGGTGCTAAGCATGCTGCT+AGG | - | chr7.3:25398859-25398878 | MS.gene73763:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 25398406 | 25399334 | 25398406 | ID=MS.gene73763 |
| chr7.3 | mRNA | 25398406 | 25399334 | 25398406 | ID=MS.gene73763.t1;Parent=MS.gene73763 |
| chr7.3 | exon | 25399312 | 25399334 | 25399312 | ID=MS.gene73763.t1.exon1;Parent=MS.gene73763.t1 |
| chr7.3 | CDS | 25399312 | 25399334 | 25399312 | ID=cds.MS.gene73763.t1;Parent=MS.gene73763.t1 |
| chr7.3 | exon | 25398406 | 25399231 | 25398406 | ID=MS.gene73763.t1.exon2;Parent=MS.gene73763.t1 |
| chr7.3 | CDS | 25398406 | 25399231 | 25398406 | ID=cds.MS.gene73763.t1;Parent=MS.gene73763.t1 |
| Gene Sequence |
| Protein sequence |
