AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74251

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74251.t1 MTR_1g116930 97.952 293 6 0 1 293 1 293 0.0 594
MS.gene74251.t1 MTR_7g005930 72.202 277 76 1 19 294 31 307 1.45e-140 412
MS.gene74251.t1 MTR_7g013270 70.408 294 79 3 23 313 90 378 2.64e-130 388
MS.gene74251.t1 MTR_7g010820 61.511 278 103 3 19 294 22 297 3.77e-112 339
MS.gene74251.t1 MTR_5g014150 57.576 297 119 4 5 294 21 317 3.35e-105 322
MS.gene74251.t1 MTR_4g098800 54.167 312 132 4 2 302 14 325 4.05e-105 321
MS.gene74251.t1 MTR_4g098800 54.167 312 132 4 2 302 79 390 2.58e-104 321
MS.gene74251.t1 MTR_7g098150 36.577 298 182 4 3 294 12 308 2.57e-63 210
MS.gene74251.t1 MTR_3g462710 37.838 296 180 3 1 294 1 294 2.83e-62 209
MS.gene74251.t1 MTR_7g067010 39.855 276 162 2 19 293 20 292 5.61e-62 208
MS.gene74251.t1 MTR_7g098090 36.242 298 183 4 3 294 12 308 6.15e-62 209
MS.gene74251.t1 MTR_7g098040 36.700 297 183 3 3 294 13 309 8.35e-62 209
MS.gene74251.t1 MTR_7g098160 35.906 298 184 4 3 294 12 308 4.95e-60 204
MS.gene74251.t1 MTR_7g098200 36.364 297 184 4 3 294 8 304 5.91e-60 204
MS.gene74251.t1 MTR_1g042310 34.899 298 190 4 1 294 3 300 7.09e-59 201
MS.gene74251.t1 MTR_7g098180 35.739 291 181 4 5 289 12 302 9.16e-59 201
MS.gene74251.t1 MTR_7g098230 37.405 262 160 3 37 294 40 301 2.00e-58 199
MS.gene74251.t1 MTR_7g098200 37.319 276 168 4 3 273 8 283 3.45e-58 199
MS.gene74251.t1 MTR_4g015080 37.024 289 177 3 7 293 17 302 5.97e-58 198
MS.gene74251.t1 MTR_1g075440 34.343 297 189 5 4 294 8 304 2.09e-57 197
MS.gene74251.t1 MTR_3g112460 35.664 286 178 4 13 294 12 295 8.50e-57 195
MS.gene74251.t1 MTR_3g112470 35.664 286 178 4 13 294 12 295 4.25e-55 190
MS.gene74251.t1 MTR_3g112450 35.315 286 181 3 13 294 12 297 1.67e-54 189
MS.gene74251.t1 MTR_1g041815 32.082 293 195 4 6 294 9 301 2.29e-54 189
MS.gene74251.t1 MTR_1g042310 36.719 256 159 3 42 294 1 256 3.04e-54 187
MS.gene74251.t1 MTR_1g042310 36.719 256 159 3 42 294 8 263 3.07e-54 187
MS.gene74251.t1 MTR_7g098220 33.775 302 180 3 12 293 3 304 5.54e-54 187
MS.gene74251.t1 MTR_1g041875 34.602 289 186 3 1 286 7 295 4.23e-53 185
MS.gene74251.t1 MTR_7g098220 36.719 256 158 2 42 293 5 260 1.13e-52 183
MS.gene74251.t1 MTR_1g041885 36.328 256 160 3 42 294 1 256 5.03e-52 181
MS.gene74251.t1 MTR_1g041835 32.423 293 194 4 6 294 9 301 6.35e-52 182
MS.gene74251.t1 MTR_3g072300 33.893 298 190 6 1 294 1 295 3.60e-51 180
MS.gene74251.t1 MTR_4g024930 50.952 210 93 3 19 218 32 241 1.52e-50 178
MS.gene74251.t1 MTR_4g033375 37.269 271 157 5 10 277 18 278 1.86e-47 168
MS.gene74251.t1 MTR_3g069500 31.515 330 209 8 2 320 4 327 1.11e-46 167
MS.gene74251.t1 MTR_5g055000 31.449 283 193 1 13 294 8 290 1.74e-46 167
MS.gene74251.t1 MTR_7g065080 34.256 289 182 6 9 294 16 299 5.30e-46 166
MS.gene74251.t1 MTR_4g033395 35.878 262 149 5 1 260 17 261 9.93e-46 164
MS.gene74251.t1 MTR_5g012270 33.103 290 191 2 19 305 25 314 1.30e-45 165
MS.gene74251.t1 MTR_7g006540 34.859 284 171 5 22 294 62 342 1.34e-44 163
MS.gene74251.t1 MTR_4g019580 31.757 296 196 5 1 294 13 304 1.98e-44 162
MS.gene74251.t1 MTR_3g069420 30.976 297 198 5 25 320 36 326 2.21e-42 156
MS.gene74251.t1 MTR_3g014790 34.400 250 142 2 15 262 9 238 2.27e-42 155
MS.gene74251.t1 MTR_1g085090 31.636 275 180 4 21 294 17 284 7.97e-41 152
MS.gene74251.t1 MTR_4g101380 32.384 281 185 4 19 294 23 303 1.11e-40 151
MS.gene74251.t1 MTR_4g033325 36.042 283 162 6 2 275 3 275 1.14e-40 151
MS.gene74251.t1 MTR_7g111260 30.164 305 202 5 1 304 1 295 2.72e-40 150
MS.gene74251.t1 MTR_3g069440 32.500 280 182 6 17 294 26 300 3.36e-40 150
MS.gene74251.t1 MTR_5g012290 33.569 283 183 4 17 294 20 302 3.49e-40 150
MS.gene74251.t1 MTR_3g005010 36.863 255 143 4 10 260 16 256 6.91e-40 149
MS.gene74251.t1 MTR_4g033330 34.276 283 167 5 2 275 3 275 1.23e-39 147
MS.gene74251.t1 MTR_8g087780 32.759 290 190 4 18 302 16 305 1.56e-39 148
MS.gene74251.t1 MTR_7g088820 30.743 296 199 5 3 294 4 297 2.25e-38 145
MS.gene74251.t1 MTR_4g033315 35.769 260 155 4 18 275 26 275 2.58e-38 144
MS.gene74251.t1 MTR_4g033310 35.769 260 155 4 18 275 26 275 2.58e-38 144
MS.gene74251.t1 MTR_0294s0020 36.567 268 151 6 2 260 3 260 6.66e-38 143
MS.gene74251.t1 MTR_8g087810 32.069 290 192 4 18 302 16 305 1.68e-37 142
MS.gene74251.t1 MTR_4g123537 30.714 280 189 4 15 293 33 308 4.55e-36 139
MS.gene74251.t1 MTR_7g088790 31.081 296 201 3 1 294 7 301 1.07e-35 137
MS.gene74251.t1 MTR_8g038880 28.713 303 178 3 22 324 19 283 2.36e-35 136
MS.gene74251.t1 MTR_3g462710 39.264 163 98 1 133 294 23 185 7.63e-35 133
MS.gene74251.t1 MTR_7g088825 30.068 296 203 4 1 294 1 294 1.36e-34 134
MS.gene74251.t1 MTR_2g017750 31.408 277 185 4 23 294 34 310 1.58e-34 134
MS.gene74251.t1 MTR_7g098200 38.764 178 105 3 121 294 13 190 2.42e-34 132
MS.gene74251.t1 MTR_7g051830 31.923 260 164 3 3 262 9 255 2.74e-34 133
MS.gene74251.t1 MTR_7g052600 31.801 261 165 3 3 263 9 256 4.24e-34 132
MS.gene74251.t1 MTR_8g469470 29.231 260 170 2 9 259 18 272 5.81e-34 132
MS.gene74251.t1 MTR_5g038380 34.728 239 154 2 19 256 24 261 8.79e-34 132
MS.gene74251.t1 MTR_4g114340 37.109 256 158 3 19 272 20 274 2.32e-33 130
MS.gene74251.t1 MTR_8g469310 34.874 238 155 0 19 256 22 259 9.62e-33 129
MS.gene74251.t1 MTR_7g065080 35.814 215 131 5 82 294 3 212 1.49e-32 127
MS.gene74251.t1 MTR_4g107670 32.171 258 168 3 2 256 3 256 1.93e-32 128
MS.gene74251.t1 MTR_1g026740 29.167 288 196 5 9 294 2 283 2.51e-32 127
MS.gene74251.t1 MTR_7g051880 28.716 296 192 4 3 292 9 291 7.73e-32 126
MS.gene74251.t1 MTR_5g038060 29.119 261 174 3 8 262 19 274 8.90e-32 126
MS.gene74251.t1 MTR_3g100980 28.352 261 179 4 21 274 14 273 9.44e-32 126
MS.gene74251.t1 MTR_7g088820 32.468 231 153 3 66 294 6 235 2.22e-31 125
MS.gene74251.t1 MTR_2g005130 28.808 302 193 8 9 301 21 309 1.18e-30 123
MS.gene74251.t1 MTR_5g038190 27.407 270 181 3 9 268 10 274 6.11e-30 121
MS.gene74251.t1 MTR_4g107510 29.730 259 175 3 5 259 18 273 8.01e-30 120
MS.gene74251.t1 MTR_7g064780 27.723 303 204 3 2 294 4 301 1.98e-29 119
MS.gene74251.t1 MTR_8g469480 29.435 248 170 2 26 268 41 288 1.10e-28 117
MS.gene74251.t1 MTR_3g100980 27.848 237 166 2 21 252 14 250 1.61e-28 117
MS.gene74251.t1 MTR_4g107580 28.028 289 204 3 10 294 9 297 2.15e-28 117
MS.gene74251.t1 MTR_4g107610 29.297 256 177 3 6 259 16 269 4.82e-28 115
MS.gene74251.t1 MTR_1g009200 26.715 277 195 3 21 294 25 296 6.78e-28 115
MS.gene74251.t1 MTR_4g033325 40.580 138 80 1 140 275 14 151 1.61e-27 112
MS.gene74251.t1 MTR_4g033325 40.580 138 80 1 140 275 40 177 1.65e-27 113
MS.gene74251.t1 MTR_4g033385 40.000 145 84 2 133 275 32 175 2.13e-27 112
MS.gene74251.t1 MTR_4g107530 26.996 263 186 4 2 259 10 271 7.58e-27 112
MS.gene74251.t1 MTR_1g026750 30.000 260 172 4 1 259 1 251 2.72e-26 110
MS.gene74251.t1 MTR_7g064800 26.606 327 235 3 2 323 4 330 3.93e-26 110
MS.gene74251.t1 MTR_1g026770 27.586 290 202 6 11 298 3 286 9.34e-26 108
MS.gene74251.t1 MTR_5g085850 32.283 254 167 3 19 268 26 278 5.23e-25 107
MS.gene74251.t1 MTR_4g033310 37.931 174 98 3 18 191 26 189 9.01e-25 105
MS.gene74251.t1 MTR_2g093160 31.982 222 144 4 41 260 39 255 4.37e-24 103
MS.gene74251.t1 MTR_2g101590 27.815 302 181 9 8 294 15 294 4.98e-24 103
MS.gene74251.t1 MTR_2g101640 26.996 263 187 4 14 272 14 275 1.05e-22 100
MS.gene74251.t1 MTR_2g101650 27.413 259 180 5 1 256 6 259 1.64e-22 99.4
MS.gene74251.t1 MTR_8g103233 29.200 250 174 2 10 256 2 251 3.16e-22 98.6
MS.gene74251.t1 MTR_7g088820 32.386 176 116 3 121 294 13 187 3.46e-22 98.2
MS.gene74251.t1 MTR_2g101610 27.152 302 184 9 8 294 15 295 7.58e-22 97.8
MS.gene74251.t1 MTR_6g008690 35.160 219 116 4 32 238 16 220 1.62e-21 96.3
MS.gene74251.t1 MTR_2g093180 30.180 222 148 3 41 260 39 255 9.83e-21 94.0
MS.gene74251.t1 MTR_2g093640 27.839 273 166 8 1 260 1 255 5.04e-20 92.0
MS.gene74251.t1 MTR_1g057460 26.198 313 198 12 4 303 21 313 9.99e-20 91.3
MS.gene74251.t1 MTR_2g101560 25.231 325 220 7 8 327 15 321 1.32e-18 87.8
MS.gene74251.t1 MTR_4g011280 28.426 197 136 5 22 215 31 225 1.78e-16 81.3
MS.gene74251.t1 MTR_7g098210 27.519 258 118 8 42 294 1 194 1.14e-15 78.6
MS.gene74251.t1 MTR_0236s0050 26.549 226 147 7 82 303 32 242 2.86e-15 77.4
MS.gene74251.t1 MTR_1g057460 26.106 226 148 7 82 303 32 242 1.14e-14 75.5
MS.gene74251.t1 MTR_4g124330 35.238 105 47 1 143 247 23 106 9.18e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74251.t1 AT5G19640 70.037 267 74 3 25 289 61 323 9.17e-128 380
MS.gene74251.t1 AT1G32450 56.856 299 122 5 2 294 16 313 1.98e-108 330
MS.gene74251.t1 AT4G21680 58.007 281 106 4 18 294 26 298 1.01e-99 307
MS.gene74251.t1 AT3G54140 38.284 303 183 3 1 301 1 301 7.40e-67 221
MS.gene74251.t1 AT3G54140 38.284 303 183 3 1 301 1 301 7.40e-67 221
MS.gene74251.t1 AT2G02040 37.586 290 178 3 7 294 24 312 1.94e-63 213
MS.gene74251.t1 AT1G62200 35.906 298 187 4 1 294 29 326 1.26e-60 205
MS.gene74251.t1 AT1G62200 36.395 294 183 4 1 290 29 322 5.04e-60 204
MS.gene74251.t1 AT1G62200 36.395 294 183 4 1 290 43 336 6.29e-60 204
MS.gene74251.t1 AT5G01180 32.566 304 199 4 1 301 1 301 2.05e-53 186
MS.gene74251.t1 AT5G01180 32.566 304 199 4 1 301 1 301 2.05e-53 186
MS.gene74251.t1 AT5G01180 32.566 304 199 4 1 301 1 301 2.05e-53 186
MS.gene74251.t1 AT2G02020 36.078 255 159 3 7 259 25 277 8.87e-52 180
MS.gene74251.t1 AT2G02020 36.078 255 159 3 7 259 25 277 8.99e-52 181
MS.gene74251.t1 AT5G46040 31.879 298 197 5 2 294 5 301 1.09e-49 176
MS.gene74251.t1 AT3G54450 34.387 253 151 1 14 266 3 240 3.34e-48 171
MS.gene74251.t1 AT5G46050 31.879 298 197 5 2 294 5 301 1.83e-47 170
MS.gene74251.t1 AT2G37900 31.973 294 195 5 2 294 16 305 2.71e-47 169
MS.gene74251.t1 AT1G12110 35.350 314 191 7 17 320 20 331 2.34e-46 167
MS.gene74251.t1 AT2G40460 32.323 297 196 5 1 294 1 295 2.78e-44 161
MS.gene74251.t1 AT1G72125 35.842 279 169 3 4 278 10 282 3.38e-43 158
MS.gene74251.t1 AT5G13400 34.875 281 175 4 19 291 60 340 1.56e-42 157
MS.gene74251.t1 AT3G53960 34.058 276 166 7 42 306 56 326 1.92e-42 156
MS.gene74251.t1 AT1G72120 35.106 282 172 5 4 281 10 284 1.13e-39 148
MS.gene74251.t1 AT1G22570 36.047 258 158 2 5 256 12 268 2.19e-39 147
MS.gene74251.t1 AT2G37900 34.061 229 147 4 66 294 2 226 7.80e-38 142
MS.gene74251.t1 AT2G26690 34.231 260 170 1 1 259 1 260 1.81e-37 142
MS.gene74251.t1 AT1G22540 35.743 249 151 4 19 263 26 269 5.59e-37 140
MS.gene74251.t1 AT1G22570 39.091 220 127 2 43 256 13 231 9.90e-37 140
MS.gene74251.t1 AT1G22550 37.308 260 153 3 5 256 12 269 4.89e-36 138
MS.gene74251.t1 AT1G72130 37.759 241 138 3 21 258 23 254 6.76e-36 137
MS.gene74251.t1 AT1G72140 32.042 284 177 5 4 277 16 293 3.22e-35 135
MS.gene74251.t1 AT1G68570 31.395 258 176 1 2 259 3 259 2.56e-34 134
MS.gene74251.t1 AT1G69870 29.762 252 172 3 21 268 49 299 1.20e-33 132
MS.gene74251.t1 AT2G26690 35.426 223 144 0 37 259 5 227 1.34e-33 131
MS.gene74251.t1 AT2G26690 36.279 215 137 0 45 259 1 215 3.07e-33 130
MS.gene74251.t1 AT1G69850 31.068 309 188 6 2 300 11 304 3.54e-33 130
MS.gene74251.t1 AT5G62730 34.137 249 136 4 15 256 48 275 1.40e-32 129
MS.gene74251.t1 AT3G25260 28.216 241 164 3 18 258 16 247 1.52e-31 125
MS.gene74251.t1 AT3G45690 29.796 245 166 3 16 259 11 250 2.50e-31 124
MS.gene74251.t1 AT1G68570 32.143 224 152 0 36 259 6 229 5.43e-31 124
MS.gene74251.t1 AT1G59740 28.000 275 193 4 2 272 19 292 2.34e-30 122
MS.gene74251.t1 AT5G62730 34.188 234 126 4 30 256 4 216 3.59e-30 121
MS.gene74251.t1 AT3G25280 31.008 258 162 5 5 258 2 247 8.96e-30 120
MS.gene74251.t1 AT3G45710 31.225 253 165 6 9 259 8 253 1.04e-29 120
MS.gene74251.t1 AT5G62680 29.630 243 169 1 26 266 46 288 1.17e-29 120
MS.gene74251.t1 AT5G46050 36.517 178 108 4 121 294 13 189 1.55e-29 119
MS.gene74251.t1 AT1G18880 30.120 249 170 3 26 271 22 269 2.65e-29 119
MS.gene74251.t1 AT1G52190 30.882 272 164 5 1 259 1 261 2.94e-29 119
MS.gene74251.t1 AT3G47960 29.600 250 171 3 21 266 56 304 1.07e-28 117
MS.gene74251.t1 AT5G14940 32.400 250 137 5 21 252 5 240 1.36e-28 117
MS.gene74251.t1 AT1G27040 31.395 258 168 3 2 257 9 259 1.87e-28 117
MS.gene74251.t1 AT3G45660 28.421 285 196 4 1 284 1 278 2.07e-28 116
MS.gene74251.t1 AT3G45660 28.421 285 196 4 1 284 1 278 2.07e-28 116
MS.gene74251.t1 AT1G27040 31.395 258 168 3 2 257 13 263 2.18e-28 116
MS.gene74251.t1 AT3G45660 28.421 285 196 4 1 284 22 299 2.70e-28 116
MS.gene74251.t1 AT3G16180 30.916 262 178 3 1 259 1 262 4.37e-28 115
MS.gene74251.t1 AT1G27080 31.076 251 170 3 11 259 2 251 1.26e-27 114
MS.gene74251.t1 AT3G21670 29.927 274 187 2 2 270 8 281 4.67e-27 112
MS.gene74251.t1 AT3G45650 29.889 271 183 4 16 284 14 279 6.36e-27 112
MS.gene74251.t1 AT3G45650 29.889 271 183 4 16 284 14 279 6.37e-27 112
MS.gene74251.t1 AT5G11570 34.583 240 140 9 24 252 14 247 9.73e-27 111
MS.gene74251.t1 AT3G45720 25.850 294 206 5 15 301 11 299 4.24e-26 110
MS.gene74251.t1 AT3G45700 26.910 301 188 7 14 311 9 280 5.73e-26 109
MS.gene74251.t1 AT5G28470 28.400 250 168 3 21 264 15 259 2.13e-25 107
MS.gene74251.t1 AT5G28470 28.400 250 168 3 21 264 15 259 2.34e-25 107
MS.gene74251.t1 AT3G45680 28.452 239 165 3 22 259 19 252 2.47e-25 107
MS.gene74251.t1 AT1G27040 32.287 223 149 2 37 257 9 231 1.82e-24 105
MS.gene74251.t1 AT3G01350 32.479 234 129 4 20 238 4 223 3.65e-24 104
MS.gene74251.t1 AT1G33440 27.090 299 207 6 1 294 15 307 2.49e-23 102
MS.gene74251.t1 AT1G69860 26.446 242 175 2 21 259 16 257 1.14e-21 97.1
MS.gene74251.t1 AT1G27080 30.952 210 142 3 52 259 1 209 6.69e-21 94.7
MS.gene74251.t1 AT1G72130 36.364 121 74 1 141 258 16 136 8.17e-15 75.9
MS.gene74251.t1 AT1G72130 36.364 121 74 1 141 258 16 136 8.17e-15 75.9
MS.gene74251.t1 AT2G38100 25.275 273 178 7 51 320 2 251 1.07e-12 69.7
MS.gene74251.t1 AT2G38100 25.275 273 178 7 51 320 18 267 1.34e-12 69.3
MS.gene74251.t1 AT2G38100 25.275 273 178 7 51 320 24 273 1.48e-12 69.3

Find 89 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCTTAGTGACTCTTAT+TGG 0.247480 1.1:-82193573 MS.gene74251:CDS
ATTTCTTAGTGACTCTTATT+GGG 0.259714 1.1:-82193572 MS.gene74251:CDS
GGCTTCAAGTATCTATATTT+AGG 0.265579 1.1:+82193028 None:intergenic
CTGTTCCTAACTAGAGTTCT+TGG 0.270529 1.1:-82193670 MS.gene74251:CDS
TTCTGCACAGTGATGATTTA+CGG 0.304897 1.1:-82192871 MS.gene74251:intron
TATCTAGTTGCATTTGGTTA+TGG 0.311220 1.1:-82193286 MS.gene74251:CDS
AATCTTTCTACAACCTTTGA+TGG 0.319784 1.1:+82192892 None:intergenic
TTACAGAGAAGAGGCTGTTA+TGG 0.359417 1.1:-82193894 MS.gene74251:CDS
TTACAGCTGCTGCTAGGAAA+TGG 0.361123 1.1:-82192970 MS.gene74251:CDS
TTTGTTCTCCAATACTGTAT+TGG 0.361963 1.1:-82193143 MS.gene74251:CDS
TCAATATATCTAGTTGCATT+TGG 0.364864 1.1:-82193292 MS.gene74251:CDS
AAAGTTGCAACCCTCTTGTT+AGG 0.375421 1.1:-82193830 MS.gene74251:intron
CTTGACCAAGAACTCTAGTT+AGG 0.376465 1.1:+82193665 None:intergenic
CCAATCTTTAACACTGCAAC+AGG 0.376529 1.1:-82190983 MS.gene74251:CDS
CACTGTCCTGTTTGTCATCA+TGG 0.378601 1.1:-82193399 MS.gene74251:CDS
CCCTGTGGTAAGGGTTGCTC+AGG 0.380769 1.1:-82192996 MS.gene74251:CDS
TAACAAGAGGGTTGCAACTT+TGG 0.384320 1.1:+82193832 None:intergenic
TTGGATTCTTCTCATCATAT+TGG 0.389881 1.1:+82193227 None:intergenic
AAAAGTTTGTCTGCCTTGGC+TGG 0.403487 1.1:+82192938 None:intergenic
CAACCAACCTTAGCAACCTT+TGG 0.408346 1.1:-82193256 MS.gene74251:CDS
CCAATTGATGATGGCTTACA+AGG 0.419321 1.1:+82193334 None:intergenic
CAGTGTTAAAGATTGGTCTT+TGG 0.429870 1.1:+82190990 None:intergenic
CCTGTTGCAGTGTTAAAGAT+TGG 0.430084 1.1:+82190983 None:intergenic
TACAGCTGCTGCTAGGAAAT+GGG 0.433867 1.1:-82192969 MS.gene74251:CDS
AGGCTGAGAAATATTATTCA+TGG 0.434178 1.1:-82191444 MS.gene74251:CDS
ATTCCACAGTATGTTCTGAT+TGG 0.440542 1.1:-82191387 MS.gene74251:CDS
CCTTGTAAGCCATCATCAAT+TGG 0.441112 1.1:-82193334 MS.gene74251:CDS
GCTCACATTATTAGCAGCTT+CGG 0.442302 1.1:+82193636 None:intergenic
ATCCCGATAAGAAGGTCAAA+AGG 0.443430 1.1:+82193053 None:intergenic
TACTGTATTGGTGTATTATG+AGG 0.443666 1.1:-82193131 MS.gene74251:CDS
AACCGTTTACATGTTCTCAT+TGG 0.446660 1.1:-82193602 MS.gene74251:CDS
CATCCAACTCCAACTCCTCT+TGG 0.447541 1.1:+82191055 None:intergenic
TATAGATACTTGAAGCCATC+AGG 0.452106 1.1:-82193022 MS.gene74251:CDS
CTTTAACACTGCAACAGGAT+TGG 0.454322 1.1:-82190978 MS.gene74251:CDS
CAGGTATCACAGAGATTGTA+AGG 0.461434 1.1:-82191464 MS.gene74251:CDS
TTTCGGAGTTGGAGTGAACT+TGG 0.472968 1.1:-82193695 MS.gene74251:CDS
AACCCAAGTGGATGTGGTAA+TGG 0.474974 1.1:-82193364 MS.gene74251:CDS
GAAACGCCATGATGACAAAC+AGG 0.475435 1.1:+82193393 None:intergenic
AACCAATGAGAACATGTAAA+CGG 0.490792 1.1:+82193600 None:intergenic
CATCAGGAAACCCTGTGGTA+AGG 0.495526 1.1:-82193006 MS.gene74251:CDS
GTTTACATGTTCTCATTGGT+TGG 0.498587 1.1:-82193598 MS.gene74251:CDS
TACAAGAGTATCAATGTTCA+AGG 0.501182 1.1:-82191081 MS.gene74251:CDS
GACACAGGGAAGTGGACAAT+GGG 0.504586 1.1:-82193109 MS.gene74251:CDS
ATCATATTGGTCAGCTCCAA+AGG 0.508004 1.1:+82193240 None:intergenic
TTGATCAACCCAAGTGGATG+TGG 0.509259 1.1:-82193370 MS.gene74251:CDS
CAAAGGTTGCTAAGGTTGGT+TGG 0.510564 1.1:+82193257 None:intergenic
TGTTCTGATTGGTGCTTCAG+AGG 0.517266 1.1:-82191376 MS.gene74251:CDS
ATGCTAACTCCAATTGATGA+TGG 0.518851 1.1:+82193325 None:intergenic
GCTCCAAAGGTTGCTAAGGT+TGG 0.519392 1.1:+82193253 None:intergenic
TGTCCATTACCACATCCACT+TGG 0.521327 1.1:+82193361 None:intergenic
TTTAGGAGATCCCGATAAGA+AGG 0.525179 1.1:+82193045 None:intergenic
ATCAGGAAACCCTGTGGTAA+GGG 0.528525 1.1:-82193005 MS.gene74251:CDS
GTCAGCTCCAAAGGTTGCTA+AGG 0.529371 1.1:+82193249 None:intergenic
CTAGTTGCATTTGGTTATGG+AGG 0.537523 1.1:-82193283 MS.gene74251:CDS
TCAAGGTGACCAAGAGGAGT+TGG 0.538000 1.1:-82191064 MS.gene74251:CDS
ATAATACACCAATACAGTAT+TGG 0.538172 1.1:+82193135 None:intergenic
ACCTGAGCAACCCTTACCAC+AGG 0.543242 1.1:+82192995 None:intergenic
AGAGCGAATGAGAATAGAAA+AGG 0.549568 1.1:-82193860 MS.gene74251:CDS
TAGTAAAGTTATAATTAAGT+CGG 0.550394 1.1:-82191016 MS.gene74251:CDS
GAAAAGTTGAAAGATTGTGC+AGG 0.551481 1.1:+82193537 None:intergenic
TTTCTTAGTGACTCTTATTG+GGG 0.552500 1.1:-82193571 MS.gene74251:CDS
TGACCAAGAGGAGTTGGAGT+TGG 0.553645 1.1:-82191058 MS.gene74251:CDS
CTTACCACAGGGTTTCCTGA+TGG 0.556410 1.1:+82193007 None:intergenic
AATAATGTGAGCAAGTGGAC+AGG 0.561339 1.1:-82193625 MS.gene74251:CDS
ATTATGAGGACACAGGGAAG+TGG 0.569522 1.1:-82193117 MS.gene74251:CDS
TCCCGATAAGAAGGTCAAAA+GGG 0.571566 1.1:+82193054 None:intergenic
GGCTGAGAAATATTATTCAT+GGG 0.571902 1.1:-82191443 MS.gene74251:CDS
CTGCTAATAATGTGAGCAAG+TGG 0.573447 1.1:-82193630 MS.gene74251:CDS
GTCCATTACCACATCCACTT+GGG 0.576880 1.1:+82193362 None:intergenic
GAACAAAGATCCAACGTTGA+GGG 0.577707 1.1:+82193159 None:intergenic
AAATGAGAATTACAGAGAAG+AGG 0.581301 1.1:-82193903 MS.gene74251:CDS
GAGGCTGTTATGGAAGAAAG+TGG 0.587025 1.1:-82193884 MS.gene74251:CDS
GGTTCTAGATCTGCCATCAA+AGG 0.588032 1.1:-82192905 MS.gene74251:CDS
ATGGGCTGTTGCTCCAGCCA+AGG 0.593411 1.1:-82192951 MS.gene74251:CDS
TAGTAGTAGTACCTAACAAG+AGG 0.596665 1.1:+82193819 None:intergenic
ATGAGAAGAATCCAAAAGAG+AGG 0.598593 1.1:-82193219 MS.gene74251:CDS
GAATGCAGTGAATCAAGCAC+TGG 0.601689 1.1:-82193731 MS.gene74251:intron
GCGAATGAGAATAGAAAAGG+AGG 0.610094 1.1:-82193857 MS.gene74251:CDS
GGACACAGGGAAGTGGACAA+TGG 0.616251 1.1:-82193110 MS.gene74251:CDS
AAATAGGTAGGTAAAATGGA+AGG 0.631160 1.1:-82193926 None:intergenic
AGTAGTAGTACCTAACAAGA+GGG 0.641367 1.1:+82193820 None:intergenic
TTGGTGTATTATGAGGACAC+AGG 0.642015 1.1:-82193124 MS.gene74251:CDS
CCTGAGCAACCCTTACCACA+GGG 0.642844 1.1:+82192996 None:intergenic
AGAACAAAGATCCAACGTTG+AGG 0.654123 1.1:+82193158 None:intergenic
CGTTTCTTGATCAACCCAAG+TGG 0.657999 1.1:-82193376 MS.gene74251:CDS
CAATGTTCAAGGTGACCAAG+AGG 0.661067 1.1:-82191070 MS.gene74251:CDS
TGGTGTATTATGAGGACACA+GGG 0.661905 1.1:-82193123 MS.gene74251:CDS
GCACCAATCAGAACATACTG+TGG 0.697676 1.1:+82191384 None:intergenic
GAAGCCATCAGGAAACCCTG+TGG 0.776526 1.1:-82193011 MS.gene74251:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr1.1:82192448-82192429 None:intergenic 0.0%
!!! ATATTAATTTCTAAAAAAGA+TGG - chr1.1:82192491-82192510 MS.gene74251:intron 10.0%
!! AAAAATACACATATATGAAA+TGG + chr1.1:82191440-82191459 None:intergenic 15.0%
!! AATTAAATTCATCTAATGTT+TGG + chr1.1:82192526-82192545 None:intergenic 15.0%
!! TAGTAAAGTTATAATTAAGT+CGG - chr1.1:82193867-82193886 MS.gene74251:CDS 15.0%
!!! TTTTCTTATCAAATTGAATA+GGG - chr1.1:82191456-82191475 MS.gene74251:CDS 15.0%
!!! TTTTTCTTATCAAATTGAAT+AGG - chr1.1:82191455-82191474 MS.gene74251:CDS 15.0%
!! TATATATATATCCCATTGTT+TGG + chr1.1:82192074-82192093 None:intergenic 20.0%
!!! TCATTTTACAATTGTAACAT+AGG + chr1.1:82192817-82192836 None:intergenic 20.0%
!!! TCATTTTACAATTGTAATCA+AGG + chr1.1:82192913-82192932 None:intergenic 20.0%
! AAATACAACAGAGTAACAAA+TGG + chr1.1:82193158-82193177 None:intergenic 25.0%
! AATTAGTGAACTTCAAAGAA+TGG - chr1.1:82193357-82193376 MS.gene74251:CDS 25.0%
! ACAATGGGATATATATATAG+AGG - chr1.1:82192075-82192094 MS.gene74251:intron 25.0%
! AGTTGAAGGTCATAATATTA+TGG + chr1.1:82192741-82192760 None:intergenic 25.0%
! ATAATACACCAATACAGTAT+TGG + chr1.1:82191751-82191770 None:intergenic 25.0%
! ATGCATTTCTTATATGAGAA+TGG - chr1.1:82192113-82192132 MS.gene74251:intron 25.0%
! ATGCATTTCTTATATGAGAA+TGG + chr1.1:82192132-82192113 None:intergenic 25.0%
! ATTAGTGAACTTCAAAGAAT+GGG - chr1.1:82193358-82193377 MS.gene74251:CDS 25.0%
! ATTTCTTAGTGACTCTTATT+GGG - chr1.1:82191311-82191330 MS.gene74251:intron 25.0%
! GTTGAAGGTCATAATATTAT+GGG + chr1.1:82192740-82192759 None:intergenic 25.0%
! TATAAGAAATGCATTCTCAT+AGG - chr1.1:82192397-82192416 MS.gene74251:intron 25.0%
! TATAAGAAATGCATTCTCAT+AGG + chr1.1:82192416-82192397 None:intergenic 25.0%
! TATACTACGTTTCTTGAAAT+GGG + chr1.1:82192789-82192808 None:intergenic 25.0%
! TCAATATATCTAGTTGCATT+TGG - chr1.1:82191591-82191610 MS.gene74251:intron 25.0%
! TTATCAAATTGAATAGGGAT+TGG - chr1.1:82191461-82191480 MS.gene74251:CDS 25.0%
! TTATGAGAAGGAATAGAATA+AGG - chr1.1:82192298-82192317 MS.gene74251:intron 25.0%
! TTATGAGAAGGAATAGAATA+AGG + chr1.1:82192317-82192298 None:intergenic 25.0%
!! ATTAACTTGAACCAAACAAT+GGG - chr1.1:82192060-82192079 MS.gene74251:intron 25.0%
!! TATTAACTTGAACCAAACAA+TGG - chr1.1:82192059-82192078 MS.gene74251:intron 25.0%
AAATGAGAATTACAGAGAAG+AGG - chr1.1:82190980-82190999 MS.gene74251:CDS 30.0%
AACCAATGAGAACATGTAAA+CGG + chr1.1:82191286-82191305 None:intergenic 30.0%
AACTTCAAAGAATGGGAATT+GGG - chr1.1:82193365-82193384 MS.gene74251:CDS 30.0%
AAGATGAAGATGAAGTTTGT+TGG - chr1.1:82192254-82192273 MS.gene74251:intron 30.0%
AATAATTGCAATGCTGTCAA+TGG - chr1.1:82193390-82193409 MS.gene74251:CDS 30.0%
AATCTTTCTACAACCTTTGA+TGG + chr1.1:82191994-82192013 None:intergenic 30.0%
ACTTCATCTTCATCTTCATA+TGG + chr1.1:82192250-82192269 None:intergenic 30.0%
AGGCTGAGAAATATTATTCA+TGG - chr1.1:82193439-82193458 MS.gene74251:intron 30.0%
CATTTCTTAGTGACTCTTAT+TGG - chr1.1:82191310-82191329 MS.gene74251:intron 30.0%
CTCTGTTGTATTTACACAAA+TGG - chr1.1:82193165-82193184 MS.gene74251:CDS 30.0%
GAGAATGGTGAGAATAATTA+TGG - chr1.1:82192128-82192147 MS.gene74251:intron 30.0%
GAGAATGGTGAGAATAATTA+TGG + chr1.1:82192147-82192128 None:intergenic 30.0%
GGCTGAGAAATATTATTCAT+GGG - chr1.1:82193440-82193459 MS.gene74251:intron 30.0%
GGCTTCAAGTATCTATATTT+AGG + chr1.1:82191858-82191877 None:intergenic 30.0%
GTATACTACGTTTCTTGAAA+TGG + chr1.1:82192790-82192809 None:intergenic 30.0%
TATCTAGTTGCATTTGGTTA+TGG - chr1.1:82191597-82191616 MS.gene74251:intron 30.0%
TATTATGACCTTATGCTCAT+TGG - chr1.1:82192840-82192859 MS.gene74251:intron 30.0%
TATTATGACCTTCAACTCAT+TGG - chr1.1:82192744-82192763 MS.gene74251:intron 30.0%
TGTTAAGAATGCTTCCAATT+TGG - chr1.1:82193125-82193144 MS.gene74251:CDS 30.0%
TTGGATTCTTCTCATCATAT+TGG + chr1.1:82191659-82191678 None:intergenic 30.0%
TTTCTTAGTGACTCTTATTG+GGG - chr1.1:82191312-82191331 MS.gene74251:intron 30.0%
TTTGTTCTCCAATACTGTAT+TGG - chr1.1:82191740-82191759 MS.gene74251:intron 30.0%
! AAGATTGATTGGTAATCCAA+GGG - chr1.1:82193333-82193352 MS.gene74251:CDS 30.0%
! ACTTTTAAACTCCTCTCTTT+TGG + chr1.1:82191678-82191697 None:intergenic 30.0%
! AGTTGAATGGATTTATGAGA+AGG + chr1.1:82192218-82192237 None:intergenic 30.0%
! CAGATGGCATAAAAAGTTTT+GGG - chr1.1:82193575-82193594 MS.gene74251:CDS 30.0%
! TACTGTATTGGTGTATTATG+AGG - chr1.1:82191752-82191771 MS.gene74251:intron 30.0%
!! GTTTCTTGAAATGGGTTAAA+GGG + chr1.1:82192781-82192800 None:intergenic 30.0%
!! TACAAGAGTATCAATGTTCA+AGG - chr1.1:82193802-82193821 MS.gene74251:intron 30.0%
AACCGTTTACATGTTCTCAT+TGG - chr1.1:82191281-82191300 MS.gene74251:intron 35.0%
AACTCCGAAAAAAGCTAAAG+TGG + chr1.1:82191178-82191197 None:intergenic 35.0%
AGAAGGAATAGAATAAGGAG+AGG - chr1.1:82192303-82192322 MS.gene74251:intron 35.0%
AGAAGGAATAGAATAAGGAG+AGG + chr1.1:82192322-82192303 None:intergenic 35.0%
AGAGCGAATGAGAATAGAAA+AGG - chr1.1:82191023-82191042 MS.gene74251:CDS 35.0%
AGATTTGAACTTCGTCTCTT+GGG + chr1.1:82192890-82192909 None:intergenic 35.0%
AGTAGTAGTACCTAACAAGA+GGG + chr1.1:82191066-82191085 None:intergenic 35.0%
ATGAGAAGAATCCAAAAGAG+AGG - chr1.1:82191664-82191683 MS.gene74251:intron 35.0%
ATGCTAACTCCAATTGATGA+TGG + chr1.1:82191561-82191580 None:intergenic 35.0%
ATGGAGAAGATGAAGTTGAA+TGG + chr1.1:82192231-82192250 None:intergenic 35.0%
ATTCCACAGTATGTTCTGAT+TGG - chr1.1:82193496-82193515 MS.gene74251:intron 35.0%
ATTCCAGAGAACCTAAACAA+AGG - chr1.1:82193700-82193719 MS.gene74251:CDS 35.0%
CTCATCATCATTCTGTGTAA+TGG + chr1.1:82193044-82193063 None:intergenic 35.0%
GAAAAGTTGAAAGATTGTGC+AGG + chr1.1:82191349-82191368 None:intergenic 35.0%
GAACTTCAAAGAATGGGAAT+TGG - chr1.1:82193364-82193383 MS.gene74251:CDS 35.0%
GATGTGATGAACTCTAACAT+CGG - chr1.1:82193211-82193230 MS.gene74251:CDS 35.0%
GGTCAATTGGAGTTCTTTAA+TGG - chr1.1:82193544-82193563 MS.gene74251:CDS 35.0%
GTTTACATGTTCTCATTGGT+TGG - chr1.1:82191285-82191304 MS.gene74251:intron 35.0%
TAGTAGTAGTACCTAACAAG+AGG + chr1.1:82191067-82191086 None:intergenic 35.0%
TATAGATACTTGAAGCCATC+AGG - chr1.1:82191861-82191880 MS.gene74251:intron 35.0%
TCATGAAAATCACTGCAAGA+GGG - chr1.1:82193662-82193681 MS.gene74251:CDS 35.0%
TGAGAATAATTATGGACCCT+TGG - chr1.1:82192136-82192155 MS.gene74251:intron 35.0%
TGAGAATAATTATGGACCCT+TGG + chr1.1:82192155-82192136 None:intergenic 35.0%
TGATTGTTGATGTTGACCAT+GGG - chr1.1:82192991-82193010 MS.gene74251:CDS 35.0%
TGGAGAAGATGAAGTTGAAT+GGG - chr1.1:82192274-82192293 MS.gene74251:intron 35.0%
TGTATGGCTTCAATTTCTCT+TGG - chr1.1:82193607-82193626 MS.gene74251:CDS 35.0%
TTCCAGAGAACCTAAACAAA+GGG - chr1.1:82193701-82193720 MS.gene74251:CDS 35.0%
TTCTGCACAGTGATGATTTA+CGG - chr1.1:82192012-82192031 MS.gene74251:intron 35.0%
TTGGAGAAGATGAAGTTGAA+TGG - chr1.1:82192273-82192292 MS.gene74251:intron 35.0%
TTTACTTGTTCTGTGCTAAG+TGG - chr1.1:82193779-82193798 MS.gene74251:intron 35.0%
TTTCATGTATGTGGGTCAAT+TGG - chr1.1:82193531-82193550 MS.gene74251:CDS 35.0%
! AACTCTTACCAATGAGTTGA+AGG + chr1.1:82192755-82192774 None:intergenic 35.0%
! AGATTGATTGGTAATCCAAG+GGG - chr1.1:82193334-82193353 MS.gene74251:CDS 35.0%
! AGGTTTTTCTTTCTTCTAGC+AGG - chr1.1:82193733-82193752 MS.gene74251:intron 35.0%
! AGTTGAATGGGTTTATGAGA+AGG - chr1.1:82192286-82192305 MS.gene74251:intron 35.0%
! CCAAAACTTTTTATGCCATC+TGG + chr1.1:82193577-82193596 None:intergenic 35.0%
! CCAGATGGCATAAAAAGTTT+TGG - chr1.1:82193574-82193593 MS.gene74251:CDS 35.0%
! GAAGATTGATTGGTAATCCA+AGG - chr1.1:82193332-82193351 MS.gene74251:CDS 35.0%
! GGTTTTTCTTTCTTCTAGCA+GGG - chr1.1:82193734-82193753 MS.gene74251:intron 35.0%
! TCAGAGGTTTTCATGTATGT+GGG - chr1.1:82193523-82193542 MS.gene74251:intron 35.0%
! TTCAGAGGTTTTCATGTATG+TGG - chr1.1:82193522-82193541 MS.gene74251:intron 35.0%
!! ATTTCTTAACTTGTGCCCTT+AGG - chr1.1:82192698-82192717 MS.gene74251:intron 35.0%
!! CAGTGTTAAAGATTGGTCTT+TGG + chr1.1:82193896-82193915 None:intergenic 35.0%
!! CGTTTCTTGAAATGGGTTAA+AGG + chr1.1:82192782-82192801 None:intergenic 35.0%
!! TTTCTTAACTTGTGCCCTTA+GGG - chr1.1:82192699-82192718 MS.gene74251:intron 35.0%
!! TTTTACTTTTCCCTCAACGT+TGG - chr1.1:82191714-82191733 MS.gene74251:intron 35.0%
!! TTTTGGGAGTTCACTTTGTA+TGG - chr1.1:82193591-82193610 MS.gene74251:CDS 35.0%
!!! ACTTTAGCTTTTTTCGGAGT+TGG - chr1.1:82191177-82191196 MS.gene74251:intron 35.0%
!!! AGACAAACTTTTTGAGGTTG+AGG - chr1.1:82191956-82191975 MS.gene74251:intron 35.0%
!!! AGTCATCTGTTTTTGATCCA+AGG - chr1.1:82192348-82192367 MS.gene74251:intron 35.0%
!!! AGTCATCTGTTTTTGATCCA+AGG + chr1.1:82192367-82192348 None:intergenic 35.0%
!!! GACAAACTTTTTGAGGTTGA+GGG - chr1.1:82191957-82191976 MS.gene74251:intron 35.0%
!!! GTCATCTGTTTTTGATCCAA+GGG - chr1.1:82192349-82192368 MS.gene74251:intron 35.0%
!!! GTCATCTGTTTTTGATCCAA+GGG + chr1.1:82192368-82192349 None:intergenic 35.0%
AAAGTTGCAACCCTCTTGTT+AGG - chr1.1:82191053-82191072 MS.gene74251:CDS 40.0%
AAATGTTAACATGTGCCCCA+AGG - chr1.1:82192559-82192578 MS.gene74251:intron 40.0%
AACCCTTACCAATGAGCATA+AGG + chr1.1:82192851-82192870 None:intergenic 40.0%
AATAATGTGAGCAAGTGGAC+AGG - chr1.1:82191258-82191277 MS.gene74251:intron 40.0%
AATGTTAACATGTGCCCCAA+GGG - chr1.1:82192560-82192579 MS.gene74251:intron 40.0%
AATTTCTTAACGTGTGCCCT+TGG + chr1.1:82192579-82192598 None:intergenic 40.0%
ACAATCCTTGTTCCGTTAGT+CGG - chr1.1:82193310-82193329 MS.gene74251:CDS 40.0%
AGAACAAAGATCCAACGTTG+AGG + chr1.1:82191728-82191747 None:intergenic 40.0%
AGATTGGAAACAATCCATGG+AGG - chr1.1:82193065-82193084 MS.gene74251:CDS 40.0%
AGCAGATTGGAAACAATCCA+TGG - chr1.1:82193062-82193081 MS.gene74251:CDS 40.0%
ATCATATTGGTCAGCTCCAA+AGG + chr1.1:82191646-82191665 None:intergenic 40.0%
ATCCCGATAAGAAGGTCAAA+AGG + chr1.1:82191833-82191852 None:intergenic 40.0%
ATTGTTGATGTTGACCATGG+GGG - chr1.1:82192993-82193012 MS.gene74251:CDS 40.0%
ATTTCTTAACGTGTGCCCTT+GGG + chr1.1:82192578-82192597 None:intergenic 40.0%
CAAATGGTGCATAGCCAAAT+TGG + chr1.1:82193142-82193161 None:intergenic 40.0%
CAGGTATCACAGAGATTGTA+AGG - chr1.1:82193419-82193438 MS.gene74251:intron 40.0%
CCAATCAATCTTCCGACTAA+CGG + chr1.1:82193325-82193344 None:intergenic 40.0%
CCAATCTTTAACACTGCAAC+AGG - chr1.1:82193900-82193919 MS.gene74251:CDS 40.0%
CCTGTTGCAGTGTTAAAGAT+TGG + chr1.1:82193903-82193922 None:intergenic 40.0%
CCTTGTAAGCCATCATCAAT+TGG - chr1.1:82191549-82191568 MS.gene74251:intron 40.0%
CTAGTTGCATTTGGTTATGG+AGG - chr1.1:82191600-82191619 MS.gene74251:intron 40.0%
CTCAAAAAGTTTGTCTGCCT+TGG + chr1.1:82191952-82191971 None:intergenic 40.0%
CTGCTAATAATGTGAGCAAG+TGG - chr1.1:82191253-82191272 MS.gene74251:intron 40.0%
CTGTTCCTAACTAGAGTTCT+TGG - chr1.1:82191213-82191232 MS.gene74251:intron 40.0%
CTTGACCAAGAACTCTAGTT+AGG + chr1.1:82191221-82191240 None:intergenic 40.0%
CTTTAACACTGCAACAGGAT+TGG - chr1.1:82193905-82193924 MS.gene74251:CDS 40.0%
GAACAAAGATCCAACGTTGA+GGG + chr1.1:82191727-82191746 None:intergenic 40.0%
GACCTTATGCTCATTGGTAA+GGG - chr1.1:82192846-82192865 MS.gene74251:intron 40.0%
GAGATTTGAACTTCGTCTCT+TGG + chr1.1:82192891-82192910 None:intergenic 40.0%
GATTGTTGATGTTGACCATG+GGG - chr1.1:82192992-82193011 MS.gene74251:CDS 40.0%
GCGAATGAGAATAGAAAAGG+AGG - chr1.1:82191026-82191045 MS.gene74251:CDS 40.0%
GCTCACATTATTAGCAGCTT+CGG + chr1.1:82191250-82191269 None:intergenic 40.0%
GTCATGAAAATCACTGCAAG+AGG - chr1.1:82193661-82193680 MS.gene74251:CDS 40.0%
GTCTCTTGGGATAGGTTAAA+GGG + chr1.1:82192877-82192896 None:intergenic 40.0%
GTGATTGTTGATGTTGACCA+TGG - chr1.1:82192990-82193009 MS.gene74251:CDS 40.0%
TAACAAGAGGGTTGCAACTT+TGG + chr1.1:82191054-82191073 None:intergenic 40.0%
TCCCGATAAGAAGGTCAAAA+GGG + chr1.1:82191832-82191851 None:intergenic 40.0%
TGAAGTTCACTAATTCCCCT+TGG + chr1.1:82193352-82193371 None:intergenic 40.0%
TGACCTTATGCTCATTGGTA+AGG - chr1.1:82192845-82192864 MS.gene74251:intron 40.0%
TGGTGTATTATGAGGACACA+GGG - chr1.1:82191760-82191779 MS.gene74251:intron 40.0%
TTACAGAGAAGAGGCTGTTA+TGG - chr1.1:82190989-82191008 MS.gene74251:CDS 40.0%
TTGGTGTATTATGAGGACAC+AGG - chr1.1:82191759-82191778 MS.gene74251:intron 40.0%
TTTAATGGTCAAGCTCCAGA+TGG - chr1.1:82193559-82193578 MS.gene74251:CDS 40.0%
TTTAGGAGATCCCGATAAGA+AGG + chr1.1:82191841-82191860 None:intergenic 40.0%
! AATAAGGAGAGGCACATATG+AGG - chr1.1:82192314-82192333 MS.gene74251:intron 40.0%
! AATAAGGAGAGGCACATATG+AGG + chr1.1:82192333-82192314 None:intergenic 40.0%
! ATCACTGTTTGTTGAGCAAG+GGG - chr1.1:82193189-82193208 MS.gene74251:CDS 40.0%
! CAAGGCAGACAAACTTTTTG+AGG - chr1.1:82191950-82191969 MS.gene74251:intron 40.0%
! CAGAATGATGATGAGCAGAT+TGG - chr1.1:82193049-82193068 MS.gene74251:CDS 40.0%
! CATCACTGTTTGTTGAGCAA+GGG - chr1.1:82193188-82193207 MS.gene74251:CDS 40.0%
! CTTGTTATCTTGTGCCCTAA+GGG + chr1.1:82192716-82192735 None:intergenic 40.0%
! TAAACAAAGGGCACATGGAT+AGG - chr1.1:82193713-82193732 MS.gene74251:CDS 40.0%
! TATCCATGTGCCCTTTGTTT+AGG + chr1.1:82193714-82193733 None:intergenic 40.0%
! TCTTGTTATCTTGTGCCCTA+AGG + chr1.1:82192717-82192736 None:intergenic 40.0%
! TGCCCTTTTGACCTTCTTAT+CGG - chr1.1:82191827-82191846 MS.gene74251:intron 40.0%
!! CCAATTGATGATGGCTTACA+AGG + chr1.1:82191552-82191571 None:intergenic 40.0%
!!! CTGGCCACTTTAGCTTTTTT+CGG - chr1.1:82191171-82191190 MS.gene74251:intron 40.0%
AAAAGTTTGTCTGCCTTGGC+TGG + chr1.1:82191948-82191967 None:intergenic 45.0%
AACCCAAGTGGATGTGGTAA+TGG - chr1.1:82191519-82191538 MS.gene74251:intron 45.0%
ACTGCAAGAGGGAATGACAA+AGG - chr1.1:82193673-82193692 MS.gene74251:CDS 45.0%
ATCAGGAAACCCTGTGGTAA+GGG - chr1.1:82191878-82191897 MS.gene74251:intron 45.0%
ATCTTCCGACTAACGGAACA+AGG + chr1.1:82193318-82193337 None:intergenic 45.0%
ATGCTGTCAATGGTTGCATC+AGG - chr1.1:82193400-82193419 MS.gene74251:CDS 45.0%
ATTATGAGGACACAGGGAAG+TGG - chr1.1:82191766-82191785 MS.gene74251:intron 45.0%
CAACCAACCTTAGCAACCTT+TGG - chr1.1:82191627-82191646 MS.gene74251:intron 45.0%
CAAGAGGGAATGACAAAGGT+TGG - chr1.1:82193677-82193696 MS.gene74251:CDS 45.0%
CAATGTTCAAGGTGACCAAG+AGG - chr1.1:82193813-82193832 MS.gene74251:intron 45.0%
CACTGTCCTGTTTGTCATCA+TGG - chr1.1:82191484-82191503 MS.gene74251:intron 45.0%
CCGTTAGTCGGAAGATTGAT+TGG - chr1.1:82193322-82193341 MS.gene74251:CDS 45.0%
CGTCTCTTGGGATAGGTTAA+AGG + chr1.1:82192878-82192897 None:intergenic 45.0%
CGTTTCTTGATCAACCCAAG+TGG - chr1.1:82191507-82191526 MS.gene74251:intron 45.0%
GAAACGCCATGATGACAAAC+AGG + chr1.1:82191493-82191512 None:intergenic 45.0%
GAATGCAGTGAATCAAGCAC+TGG - chr1.1:82191152-82191171 MS.gene74251:intron 45.0%
GAGGCTGTTATGGAAGAAAG+TGG - chr1.1:82190999-82191018 MS.gene74251:CDS 45.0%
GATGTCAAACACAGACATGC+TGG + chr1.1:82193257-82193276 None:intergenic 45.0%
GCACCAATCAGAACATACTG+TGG + chr1.1:82193502-82193521 None:intergenic 45.0%
GTCCATTACCACATCCACTT+GGG + chr1.1:82191524-82191543 None:intergenic 45.0%
TACAGCTGCTGCTAGGAAAT+GGG - chr1.1:82191914-82191933 MS.gene74251:intron 45.0%
TGAACTTCGTCTCTTGGGAT+AGG + chr1.1:82192885-82192904 None:intergenic 45.0%
TGTCCATTACCACATCCACT+TGG + chr1.1:82191525-82191544 None:intergenic 45.0%
TTACAGCTGCTGCTAGGAAA+TGG - chr1.1:82191913-82191932 MS.gene74251:intron 45.0%
TTGATCAACCCAAGTGGATG+TGG - chr1.1:82191513-82191532 MS.gene74251:intron 45.0%
TTTCGGAGTTGGAGTGAACT+TGG - chr1.1:82191188-82191207 MS.gene74251:intron 45.0%
TTTCTTAACGTGTGCCCTTG+GGG + chr1.1:82192577-82192596 None:intergenic 45.0%
! AGGTTTTTACAGCTGCTGCT+AGG - chr1.1:82191907-82191926 MS.gene74251:intron 45.0%
! CAAAGGTTGCTAAGGTTGGT+TGG + chr1.1:82191629-82191648 None:intergenic 45.0%
! GAACCTAAACAAAGGGCACA+TGG - chr1.1:82193708-82193727 MS.gene74251:CDS 45.0%
! GCATCACTGTTTGTTGAGCA+AGG - chr1.1:82193187-82193206 MS.gene74251:CDS 45.0%
! GCCCTTTTGACCTTCTTATC+GGG - chr1.1:82191828-82191847 MS.gene74251:intron 45.0%
! TGCCCTTTGTTTAGGTTCTC+TGG + chr1.1:82193706-82193725 None:intergenic 45.0%
! TGTTCTGATTGGTGCTTCAG+AGG - chr1.1:82193507-82193526 MS.gene74251:intron 45.0%
! TTGCACAGTGACTCAAGTTG+AGG - chr1.1:82193090-82193109 MS.gene74251:CDS 45.0%
!! GGTTCTAGATCTGCCATCAA+AGG - chr1.1:82191978-82191997 MS.gene74251:intron 45.0%
!! TGAATTTAATTAATAATATT+AGG - chr1.1:82192535-82192554 MS.gene74251:intron 5.0%
CATCAGGAAACCCTGTGGTA+AGG - chr1.1:82191877-82191896 MS.gene74251:intron 50.0%
CATCCAACTCCAACTCCTCT+TGG + chr1.1:82193831-82193850 None:intergenic 50.0%
CTTACCACAGGGTTTCCTGA+TGG + chr1.1:82191879-82191898 None:intergenic 50.0%
GACACAGGGAAGTGGACAAT+GGG - chr1.1:82191774-82191793 MS.gene74251:intron 50.0%
GCTCCAAAGGTTGCTAAGGT+TGG + chr1.1:82191633-82191652 None:intergenic 50.0%
GTCAGCTCCAAAGGTTGCTA+AGG + chr1.1:82191637-82191656 None:intergenic 50.0%
TCAAGGTGACCAAGAGGAGT+TGG - chr1.1:82193819-82193838 MS.gene74251:intron 50.0%
TGACCAAGAGGAGTTGGAGT+TGG - chr1.1:82193825-82193844 MS.gene74251:intron 50.0%
ACCTGAGCAACCCTTACCAC+AGG + chr1.1:82191891-82191910 None:intergenic 55.0%
CCTGAGCAACCCTTACCACA+GGG + chr1.1:82191890-82191909 None:intergenic 55.0%
GAAGCCATCAGGAAACCCTG+TGG - chr1.1:82191872-82191891 MS.gene74251:intron 55.0%
GGACACAGGGAAGTGGACAA+TGG - chr1.1:82191773-82191792 MS.gene74251:intron 55.0%
GTCACTGTGCAAAGCCTCCA+TGG + chr1.1:82193082-82193101 None:intergenic 55.0%
TCCATCAATCTGCACCCCCA+TGG + chr1.1:82193010-82193029 None:intergenic 55.0%
! AACACAGACATGCTGGCTGC+TGG + chr1.1:82193250-82193269 None:intergenic 55.0%
! ACCATGGGGGTGCAGATTGA+TGG - chr1.1:82193006-82193025 MS.gene74251:CDS 55.0%
CCCTGTGGTAAGGGTTGCTC+AGG - chr1.1:82191887-82191906 MS.gene74251:intron 60.0%
! ATGGGCTGTTGCTCCAGCCA+AGG - chr1.1:82191932-82191951 MS.gene74251:intron 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 82190972 82193933 82190972 ID=MS.gene74251
chr1.1 mRNA 82190972 82193933 82190972 ID=MS.gene74251.t1;Parent=MS.gene74251
chr1.1 exon 82193831 82193933 82193831 ID=MS.gene74251.t1.exon1;Parent=MS.gene74251.t1
chr1.1 CDS 82193831 82193933 82193831 ID=cds.MS.gene74251.t1;Parent=MS.gene74251.t1
chr1.1 exon 82193528 82193745 82193528 ID=MS.gene74251.t1.exon2;Parent=MS.gene74251.t1
chr1.1 CDS 82193528 82193745 82193528 ID=cds.MS.gene74251.t1;Parent=MS.gene74251.t1
chr1.1 exon 82192872 82193428 82192872 ID=MS.gene74251.t1.exon3;Parent=MS.gene74251.t1
chr1.1 CDS 82192872 82193428 82192872 ID=cds.MS.gene74251.t1;Parent=MS.gene74251.t1
chr1.1 exon 82191369 82191483 82191369 ID=MS.gene74251.t1.exon4;Parent=MS.gene74251.t1
chr1.1 CDS 82191369 82191483 82191369 ID=cds.MS.gene74251.t1;Parent=MS.gene74251.t1
chr1.1 exon 82190972 82191106 82190972 ID=MS.gene74251.t1.exon5;Parent=MS.gene74251.t1
chr1.1 CDS 82190972 82191106 82190972 ID=cds.MS.gene74251.t1;Parent=MS.gene74251.t1
Gene Sequence

>MS.gene74251

ATGGAAGGAAATGAGAATTACAGAGAAGAGGCTGTTATGGAAGAAAGTGGCAGAGCGAATGAGAATAGAAAAGGAGGAACCAAAGTTGCAACCCTCTTGTTAGGTACTACTACTACTTAACAAATGATTGTTAACTCTTTTTATTTGTTAGTTTTATTGTTGAGTTTTTGAAGAATGAATGAATGCAGTGAATCAAGCACTGGCCACTTTAGCTTTTTTCGGAGTTGGAGTGAACTTGGTTCTGTTCCTAACTAGAGTTCTTGGTCAAGACAATGCCGAAGCTGCTAATAATGTGAGCAAGTGGACAGGAACCGTTTACATGTTCTCATTGGTTGGAGCATTTCTTAGTGACTCTTATTGGGGTCGATACTTAACCTGCACAATCTTTCAACTTTTCTTTGTTCTCGTATGTATACTATTAATTCATTGTAACTAACAATATTTTGAATTTTCTATATATCTTGTCCATTTCATATATGTGTATTTTTCTTATCAAATTGAATAGGGATTGGCACTGTCCTGTTTGTCATCATGGCGTTTCTTGATCAACCCAAGTGGATGTGGTAATGGACATATTCCTTGTAAGCCATCATCAATTGGAGTTAGCATTTTCTACTTTTCAATATATCTAGTTGCATTTGGTTATGGAGGACACCAACCAACCTTAGCAACCTTTGGAGCTGACCAATATGATGAGAAGAATCCAAAAGAGAGGAGTTTAAAAGTAGCTTTCTTCTGTTATTTTTACTTTTCCCTCAACGTTGGATCTTTGTTCTCCAATACTGTATTGGTGTATTATGAGGACACAGGGAAGTGGACAATGGGTTTCTTTATATCATTGATCTCTGCTATCATTGCCCTTTTGACCTTCTTATCGGGATCTCCTAAATATAGATACTTGAAGCCATCAGGAAACCCTGTGGTAAGGGTTGCTCAGGTTTTTACAGCTGCTGCTAGGAAATGGGCTGTTGCTCCAGCCAAGGCAGACAAACTTTTTGAGGTTGAGGGTTCTAGATCTGCCATCAAAGGTTGTAGAAAGATTCTGCACAGTGATGATTTACGGTAAGCTAGCTCTCAGATAAAACATTATTAACTTGAACCAAACAATGGGATATATATATAGAGGACATATCCTATGAGAATGCATTTCTTATATGAGAATGGTGAGAATAATTATGGACCCTTGGATCAAAAACAGATGACTGAGATTAAAAGCCTCATATGTGCCTCTCCTTATTCTATTCCTTCTCATAAATCCATTCAACTTCATCTTCTCCATATGAAGATGAAGATGAAGTTTGTTGGAGAAGATGAAGTTGAATGGGTTTATGAGAAGGAATAGAATAAGGAGAGGCACATATGAGGCTTTTAATCTCAGTCATCTGTTTTTGATCCAAGGGTCCATAATTATTCTCACCATTCTCATATAAGAAATGCATTCTCATAGGATATGTCCTATATATATATATATATATATATATATATATATATATATACACACACACACAGCAAGCAAGCTATATTAATTTCTAAAAAAGATGGAAGAAAGAACCAAACATTAGATGAATTTAATTAATAATATTAGGCAAATGTTAACATGTGCCCCAAGGGCACACGTTAAGAAATTTAAAATAGAAATAAATATCTTAAAAGTTGTGCATTCAACTTTATTCAACTTTTTAAAGTAAACATTTTGTTCTTTTCTATGAAAAACTTCTAATTTTAGATTTCTTAACTTGTGCCCTTAGGGCACAAGATAACAAGACCCATAATATTATGACCTTCAACTCATTGGTAAGAGTTTTACCCTTTAACCCATTTCAAGAAACGTAGTATACATCTCCTATGTTACAATTGTAAAATGATTATATTATGACCTTATGCTCATTGGTAAGGGTTTTACCCTTTAACCTATCCCAAGAGACGAAGTTCAAATCTCCTTGATTACAATTGTAAAATGATTATTACTGCTACTTTAATTAATTAAAATATTATGAAACTTGAAACTAATTATATATGTGATTGTTGATGTTGACCATGGGGGTGCAGATTGATGGACAAAGCTGCAACCATTACACAGAATGATGATGAGCAGATTGGAAACAATCCATGGAGGCTTTGCACAGTGACTCAAGTTGAGGAAACAAAATGTGTGTTAAGAATGCTTCCAATTTGGCTATGCACCATTTGTTACTCTGTTGTATTTACACAAATGGCATCACTGTTTGTTGAGCAAGGGGATGTGATGAACTCTAACATCGGAGAATTTCGTTTGCCAGCAGCCAGCATGTCTGTGTTTGACATCTGTAGTGTGCTAGTATGCACTGTAATTTATCGCACAATCCTTGTTCCGTTAGTCGGAAGATTGATTGGTAATCCAAGGGGAATTAGTGAACTTCAAAGAATGGGAATTGGGTTAATAATTGCAATGCTGTCAATGGTTGCATCAGGTATCACAGAGATTGTAAGGCTGAGAAATATTATTCATGGGCAGAAAAGAAGTTCAATGAGTATATTCTATCAAATTCCACAGTATGTTCTGATTGGTGCTTCAGAGGTTTTCATGTATGTGGGTCAATTGGAGTTCTTTAATGGTCAAGCTCCAGATGGCATAAAAAGTTTTGGGAGTTCACTTTGTATGGCTTCAATTTCTCTTGGAAACTATGTGAGTAGCATGCTTGTTCACGTTGTCATGAAAATCACTGCAAGAGGGAATGACAAAGGTTGGATTCCAGAGAACCTAAACAAAGGGCACATGGATAGGTTTTTCTTTCTTCTAGCAGGGCTAGTTGTTTTTGATTTTGTGATTTACTTGTTCTGTGCTAAGTGGTACAAGAGTATCAATGTTCAAGGTGACCAAGAGGAGTTGGAGTTGGATGATGCTGATAACATTAATAGTAAAGTTATAATTAAGTCGGCATCCAAAGACCAATCTTTAACACTGCAACAGGATTGGAGCTGA
Protein sequence

>MS.gene74251.t1

MEGNENYREEAVMEESGRANENRKGGTKVATLLLVNQALATLAFFGVGVNLVLFLTRVLGQDNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQLFFVLGLALSCLSSWRFLINPSGCGNGHIPCKPSSIGVSIFYFSIYLVAFGYGGHQPTLATFGADQYDEKNPKERSLKVAFFCYFYFSLNVGSLFSNTVLVYYEDTGKWTMGFFISLISAIIALLTFLSGSPKYRYLKPSGNPVVRVAQVFTAAARKWAVAPAKADKLFEVEGSRSAIKGCRKILHSDDLRYHRDCKAEKYYSWAEKKFNEYILSNSTVCSDWCFRGFHWYKSINVQGDQEELELDDADNINSKVIIKSASKDQSLTLQQDWS