AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74255

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74255.t1 MTR_1g116790 89.489 352 17 7 1 341 1 343 1.61e-180 503
MS.gene74255.t1 MTR_1g052470 42.023 257 120 7 96 335 126 370 1.97e-41 149
MS.gene74255.t1 MTR_4g065870 38.783 263 129 7 97 339 181 431 1.23e-37 139
MS.gene74255.t1 MTR_2g098310 61.404 114 39 2 229 339 297 408 7.47e-37 137
MS.gene74255.t1 MTR_8g036235 33.071 381 173 14 16 335 29 388 1.62e-36 135
MS.gene74255.t1 MTR_4g033295 58.947 95 39 0 245 339 100 194 9.06e-34 123
MS.gene74255.t1 MTR_4g065870 38.710 248 120 7 97 324 181 416 2.78e-33 127
MS.gene74255.t1 MTR_2g098310 62.376 101 33 2 229 326 297 395 6.46e-33 126
MS.gene74255.t1 MTR_3g028520 38.672 256 115 10 97 336 166 395 2.05e-32 125
MS.gene74255.t1 MTR_3g027650 38.672 256 115 10 97 336 166 395 2.05e-32 125
MS.gene74255.t1 MTR_4g033295 62.651 83 31 0 245 327 100 182 4.50e-31 116
MS.gene74255.t1 MTR_3g027650 39.344 244 106 10 97 324 166 383 1.32e-30 120
MS.gene74255.t1 MTR_2g098310 46.980 149 39 3 229 339 297 443 8.38e-30 118
MS.gene74255.t1 MTR_7g092540 31.579 323 158 10 69 339 8 319 2.97e-26 106
MS.gene74255.t1 MTR_8g036235 31.700 347 155 14 16 301 29 354 5.37e-25 104
MS.gene74255.t1 MTR_7g092540 32.258 310 147 10 69 326 8 306 9.43e-25 102
MS.gene74255.t1 MTR_2g098310 63.158 76 23 2 229 301 297 370 1.86e-22 97.8
MS.gene74255.t1 MTR_4g033295 67.213 61 20 0 245 305 100 160 3.56e-22 92.4
MS.gene74255.t1 MTR_4g065870 65.217 69 23 1 234 301 325 393 8.16e-22 95.9
MS.gene74255.t1 MTR_3g027650 35.747 221 100 10 97 301 166 360 1.10e-18 86.3
MS.gene74255.t1 MTR_1g052470 36.816 201 98 7 96 279 126 314 1.09e-15 77.0
MS.gene74255.t1 MTR_4g131160 53.846 65 29 1 262 326 195 258 6.23e-14 72.4
MS.gene74255.t1 MTR_4g131160 53.846 65 29 1 262 326 198 261 7.04e-14 72.4
MS.gene74255.t1 MTR_6g052280 49.315 73 34 2 231 301 21 92 1.91e-12 63.9
MS.gene74255.t1 MTR_1g080890 50.769 65 31 1 262 326 192 255 4.43e-12 66.6
MS.gene74255.t1 MTR_3g498825 50.000 64 32 0 263 326 147 210 8.89e-12 65.9
MS.gene74255.t1 MTR_8g012290 47.059 68 36 0 263 330 291 358 2.16e-11 65.1
MS.gene74255.t1 MTR_8g012290 47.059 68 36 0 263 330 291 358 2.17e-11 65.1
MS.gene74255.t1 MTR_3g116770 47.059 68 36 0 263 330 191 258 2.49e-11 64.7
MS.gene74255.t1 MTR_3g116770 47.059 68 36 0 263 330 191 258 2.64e-11 64.7
MS.gene74255.t1 MTR_1g018090 50.000 68 33 1 262 329 273 339 2.75e-11 64.3
MS.gene74255.t1 MTR_5g005110 50.000 68 33 1 262 329 223 289 2.83e-11 64.3
MS.gene74255.t1 MTR_8g062240 46.377 69 37 0 263 331 151 219 3.16e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74255.t1 AT1G05805 42.935 368 125 13 27 339 22 359 6.84e-70 222
MS.gene74255.t1 AT2G43140 49.265 272 79 11 93 339 71 308 1.14e-62 202
MS.gene74255.t1 AT2G43140 53.991 213 64 7 135 339 25 211 2.54e-59 190
MS.gene74255.t1 AT1G51140 61.765 102 35 1 234 335 279 376 4.26e-36 134
MS.gene74255.t1 AT1G35460 61.290 93 36 0 247 339 165 257 6.00e-36 131
MS.gene74255.t1 AT2G42280 71.429 84 24 0 256 339 272 355 9.92e-35 130
MS.gene74255.t1 AT2G42280 79.710 69 14 0 256 324 272 340 5.24e-31 120
MS.gene74255.t1 AT1G35460 57.500 80 26 2 234 305 144 223 2.28e-23 97.1
MS.gene74255.t1 AT2G24260 55.385 65 28 1 262 326 34 97 6.90e-14 70.9
MS.gene74255.t1 AT2G24260 55.385 65 28 1 262 326 137 200 1.17e-13 71.6
MS.gene74255.t1 AT5G58010 50.769 65 31 1 262 326 98 161 2.08e-13 70.1
MS.gene74255.t1 AT4G30980 53.846 65 29 1 262 326 129 192 2.22e-13 70.5
MS.gene74255.t1 AT4G30980 53.846 65 29 1 262 326 177 240 3.01e-13 70.5
MS.gene74255.t1 AT1G25330 45.833 72 37 1 255 326 98 167 2.40e-12 66.2
MS.gene74255.t1 AT4G34530 50.000 64 32 0 263 326 172 235 3.63e-12 67.0
MS.gene74255.t1 AT5G50915 44.737 76 40 1 255 330 130 203 7.03e-12 65.5
MS.gene74255.t1 AT5G50915 44.737 76 40 1 255 330 130 203 7.03e-12 65.5
MS.gene74255.t1 AT5G50915 44.737 76 40 1 255 330 130 203 7.87e-12 65.1
MS.gene74255.t1 AT5G50915 44.737 76 40 1 255 330 130 203 7.87e-12 65.1
MS.gene74255.t1 AT1G68920 44.737 76 41 1 255 330 295 369 1.35e-11 65.9
MS.gene74255.t1 AT1G68920 44.737 76 41 1 255 330 296 370 1.36e-11 65.9
MS.gene74255.t1 AT1G68920 44.737 76 41 1 255 330 296 370 1.36e-11 65.9
MS.gene74255.t1 AT1G68920 44.737 76 41 1 255 330 296 370 1.36e-11 65.9
MS.gene74255.t1 AT1G26260 45.333 75 38 1 255 326 190 264 1.48e-11 65.5
MS.gene74255.t1 AT1G26260 45.333 75 38 1 255 326 212 286 1.55e-11 65.5
MS.gene74255.t1 AT1G26260 45.333 75 38 1 255 326 212 286 1.55e-11 65.5
MS.gene74255.t1 AT1G26260 45.333 75 38 1 255 326 212 286 1.55e-11 65.5
MS.gene74255.t1 AT1G26260 45.333 75 38 1 255 326 212 286 1.55e-11 65.5
MS.gene74255.t1 AT1G26260 48.438 64 33 0 263 326 172 235 1.83e-11 64.7
MS.gene74255.t1 AT4G36540 48.438 64 33 0 263 326 141 204 4.89e-11 63.2
MS.gene74255.t1 AT4G36540 48.438 64 33 0 263 326 141 204 5.19e-11 63.2
MS.gene74255.t1 AT5G48560 43.421 76 41 1 255 330 295 368 5.84e-11 63.9
MS.gene74255.t1 AT5G48560 43.421 76 41 1 255 330 295 368 5.96e-11 63.9

Find 93 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCTGTTGCTGCTGCTGC+TGG 0.178303 1.1:+82236893 None:intergenic
GTTGTTGTTGTTATTATTAT+CGG 0.271568 1.1:+82236452 None:intergenic
CTGCTGTTGCTGCTGCTGCT+GGG 0.303616 1.1:+82236894 None:intergenic
TTATTCAGACATGCTGGATT+TGG 0.325679 1.1:-82233289 MS.gene74255:CDS
GGAGGATCACGCCTTCTTCC+TGG 0.332014 1.1:-82236949 MS.gene74255:CDS
TTTACAAGGGACGGAATCTT+GGG 0.341870 1.1:+82236141 None:intergenic
TCCTCGTAGCATTGCTGAAC+GGG 0.362115 1.1:-82236089 MS.gene74255:intron
GGTCAAGCTGGTGGCTTTGA+TGG 0.364612 1.1:-82236832 MS.gene74255:CDS
TTGTTGTTGTTATTATTATC+GGG 0.382053 1.1:+82236453 None:intergenic
AATTATACCTTATCCATGTT+AGG 0.394411 1.1:+82235909 None:intergenic
ATCTCTGCTGTTGTTGTTGG+TGG 0.394430 1.1:+82236866 None:intergenic
AAGATCTCTGCTGTTGTTGT+TGG 0.403987 1.1:+82236863 None:intergenic
GCATCAGCAGCAGCTGGAAA+TGG 0.408966 1.1:-82236513 MS.gene74255:CDS
AAATAATGTTGTCCCGTTCC+AGG 0.410987 1.1:+82236931 None:intergenic
TTGAGAAGAAGAAAATACTA+TGG 0.436830 1.1:+82236422 None:intergenic
TAGTCTCCCACAAACTTCTC+TGG 0.449517 1.1:-82236191 MS.gene74255:CDS
TCTGCTGTTGTTGTTGGTGG+TGG 0.454056 1.1:+82236869 None:intergenic
TTCAGACATGCTGGATTTGG+CGG 0.454145 1.1:-82233286 MS.gene74255:CDS
TCACGCCTTCTTCCTGGAAC+GGG 0.457043 1.1:-82236943 MS.gene74255:CDS
GTATCGTCCACCTTCCTCAT+CGG 0.462261 1.1:-82237094 MS.gene74255:CDS
TGGCAAGTTGAAGAAGTTGC+AGG 0.465868 1.1:-82235940 MS.gene74255:CDS
GAGAGAAGAACTAGAATAAG+TGG 0.469542 1.1:-82235960 MS.gene74255:CDS
TATGATTGAGAGTGGCTAGA+TGG 0.473699 1.1:+82236764 None:intergenic
AGGTCTTCAAACTCAAGTTC+AGG 0.476074 1.1:-82233250 MS.gene74255:intron
GGGGCCTCCACCCCAGGTAT+TGG 0.479871 1.1:+82236473 None:intergenic
ACAGAGCTCCATCAGTCAAA+CGG 0.480020 1.1:-82237040 MS.gene74255:CDS
TATCGTCCACCTTCCTCATC+GGG 0.481788 1.1:-82237093 MS.gene74255:CDS
CAGAGCTCCATCAGTCAAAC+GGG 0.487084 1.1:-82237039 MS.gene74255:CDS
CATAATAACAATAACAATAA+CGG 0.488709 1.1:-82236745 MS.gene74255:intron
ATTATCGGGGCCTCCACCCC+AGG 0.489981 1.1:+82236467 None:intergenic
ACCACTGTGGATGCCATCAT+AGG 0.495661 1.1:-82236976 MS.gene74255:CDS
ATGAGTGGCGCATCCACGCT+TGG 0.498051 1.1:+82236111 None:intergenic
AAGAAGGTCGGGATCATCAT+TGG 0.499212 1.1:+82236338 None:intergenic
AACAAGTTATTCAGACATGC+TGG 0.500068 1.1:-82233295 MS.gene74255:CDS
TGTACTTTGTTTGCATCCGC+AGG 0.501831 1.1:+82232987 None:intergenic
CCCACAAACTTCTCTGGAGA+TGG 0.503550 1.1:-82236185 MS.gene74255:CDS
AAGTCTGAATTGAGTTTCAC+TGG 0.510691 1.1:-82236585 MS.gene74255:CDS
CCTTGTACCTAACATGGATA+AGG 0.512854 1.1:-82235916 MS.gene74255:intron
CCTTATCCATGTTAGGTACA+AGG 0.519581 1.1:+82235916 None:intergenic
CAAACGGGTCTCACAAGGTA+TGG 0.525076 1.1:-82237024 MS.gene74255:CDS
AGGCAATGTAGAAGAAGGTC+GGG 0.527337 1.1:+82236327 None:intergenic
GTGGTGTTGAGGAGAGAGCT+AGG 0.530531 1.1:+82236994 None:intergenic
GATTATGCATCAGCAGCAGC+TGG 0.531366 1.1:-82236519 MS.gene74255:CDS
GGCTAGATGGTTGAGAAAGC+CGG 0.532966 1.1:+82236777 None:intergenic
TGCATACTAGTACCAATACC+TGG 0.536914 1.1:-82236485 MS.gene74255:CDS
GAATTGAGTTTCACTGGTGG+AGG 0.537805 1.1:-82236579 MS.gene74255:CDS
GTTGTCCCGTTCCAGGAAGA+AGG 0.539397 1.1:+82236938 None:intergenic
CCATCTCCAGAGAAGTTTGT+GGG 0.544047 1.1:+82236185 None:intergenic
TGTAAAATCCGTGCCAAGCG+TGG 0.544695 1.1:-82236124 MS.gene74255:CDS
GGGGAATATTATGCATAAGC+TGG 0.546019 1.1:+82236161 None:intergenic
TGGCGCATCCACGCTTGGCA+CGG 0.548021 1.1:+82236116 None:intergenic
CCTCAATGCCCTCGAAACTC+AGG 0.548042 1.1:-82236307 MS.gene74255:intron
ATCCTCGTAGCATTGCTGAA+CGG 0.552987 1.1:-82236090 MS.gene74255:CDS
TGTGAGACCCGTTTGACTGA+TGG 0.553828 1.1:+82237032 None:intergenic
AGTACCAATACCTGGGGTGG+AGG 0.556362 1.1:-82236477 MS.gene74255:CDS
TCCATCTCCAGAGAAGTTTG+TGG 0.557386 1.1:+82236184 None:intergenic
TGATCCTCCTACTCCTATGA+TGG 0.563521 1.1:+82236963 None:intergenic
GTCGGGATCATCATTGGTGT+CGG 0.563524 1.1:+82236344 None:intergenic
TGTTGTTGTTATTATTATCG+GGG 0.564933 1.1:+82236454 None:intergenic
TCTTCTTACGAAGGTCAAGC+TGG 0.565420 1.1:-82236844 MS.gene74255:CDS
ATCACGCCTTCTTCCTGGAA+CGG 0.566174 1.1:-82236944 MS.gene74255:CDS
CATTGAGGCAATGTAGAAGA+AGG 0.573373 1.1:+82236322 None:intergenic
CCTGAGTTTCGAGGGCATTG+AGG 0.579102 1.1:+82236307 None:intergenic
AGATGGTTGAGAAAGCCGGC+TGG 0.579941 1.1:+82236781 None:intergenic
ATTGTTATTATGATTGAGAG+TGG 0.580253 1.1:+82236756 None:intergenic
GAGGCAATGTAGAAGAAGGT+CGG 0.583589 1.1:+82236326 None:intergenic
GTGGATGCCATCATAGGAGT+AGG 0.587569 1.1:-82236970 MS.gene74255:CDS
CTGTTGTTGCTGAGACGAAG+AGG 0.588667 1.1:+82237059 None:intergenic
TTGGCGGTTCAACATATCAA+AGG 0.593157 1.1:-82233270 MS.gene74255:CDS
AGATGGTACCTGAGTTTCGA+GGG 0.602433 1.1:+82236299 None:intergenic
GCATACTAGTACCAATACCT+GGG 0.607090 1.1:-82236484 MS.gene74255:CDS
GACCTTGAGAATTGCACCTG+CGG 0.607185 1.1:-82233003 MS.gene74255:CDS
CGTCAGAAAAGCTCTCCAGC+CGG 0.607974 1.1:-82236796 MS.gene74255:CDS
AGCAATGCTACGAGGATGAG+TGG 0.612328 1.1:+82236096 None:intergenic
GATGCCATCATAGGAGTAGG+AGG 0.612834 1.1:-82236967 MS.gene74255:CDS
ATCCGCAGGTGCAATTCTCA+AGG 0.615432 1.1:+82233001 None:intergenic
GAAGAAGAACCCGATGAGGA+AGG 0.617996 1.1:+82237084 None:intergenic
GAAGAACCCGATGAGGAAGG+TGG 0.619178 1.1:+82237087 None:intergenic
TTGATTGAATTGCAGCTGGG+GGG 0.621095 1.1:-82236638 MS.gene74255:intron
TCAGTCAAACGGGTCTCACA+AGG 0.625307 1.1:-82237029 MS.gene74255:CDS
ACTAGTACCAATACCTGGGG+TGG 0.626810 1.1:-82236480 MS.gene74255:CDS
GAGATGGTACCTGAGTTTCG+AGG 0.631100 1.1:+82236298 None:intergenic
TGGCATCCACAGTGGTGTTG+AGG 0.637238 1.1:+82236983 None:intergenic
TTACAAGGGACGGAATCTTG+GGG 0.638798 1.1:+82236142 None:intergenic
TCTTACGAAGGTCAAGCTGG+TGG 0.649831 1.1:-82236841 MS.gene74255:CDS
GCAGGACCTTGTACCTAACA+TGG 0.655399 1.1:-82235922 MS.gene74255:CDS
TCTGAATTGAGTTTCACTGG+TGG 0.663147 1.1:-82236582 MS.gene74255:CDS
GGAAGAAGAAGAACCCGATG+AGG 0.673921 1.1:+82237080 None:intergenic
TCCTATGATGGCATCCACAG+TGG 0.685277 1.1:+82236975 None:intergenic
CAGCAGAGATCTTCTTACGA+AGG 0.692275 1.1:-82236853 MS.gene74255:CDS
CTCTCTCCTCAACACCACTG+TGG 0.695914 1.1:-82236989 MS.gene74255:CDS
ACCCGTTCAGCAATGCTACG+AGG 0.708822 1.1:+82236088 None:intergenic
CATACTAGTACCAATACCTG+GGG 0.719667 1.1:-82236483 MS.gene74255:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAATATTTCATTGAT+AGG - chr1.1:82236950-82236969 MS.gene74255:CDS 10.0%
!! TTGAATTATTTATGTATTTA+AGG + chr1.1:82235400-82235419 None:intergenic 10.0%
!! AAATGAATTAATAATAGGTA+AGG + chr1.1:82234229-82234248 None:intergenic 15.0%
!! AATTATGAACTAATTTAACT+TGG + chr1.1:82236573-82236592 None:intergenic 15.0%
!! CATAATAACAATAACAATAA+CGG - chr1.1:82233335-82233354 MS.gene74255:intron 15.0%
!! CTAATTTATCATCATTATAT+AGG - chr1.1:82234266-82234285 MS.gene74255:intron 15.0%
!! CTATATAATGATGATAAATT+AGG + chr1.1:82234268-82234287 None:intergenic 15.0%
!! TAACTAAAAATGAAATAATG+TGG + chr1.1:82233838-82233857 None:intergenic 15.0%
!! TCTATTAGAAACTTAATTAA+GGG + chr1.1:82234457-82234476 None:intergenic 15.0%
!!! ATATTTTCTACAATAAGTAT+TGG - chr1.1:82236644-82236663 MS.gene74255:intron 15.0%
!!! ATTTATGTATGATAGTTTTT+AGG + chr1.1:82235318-82235337 None:intergenic 15.0%
!!! CTTTTAGATATATACTTTTA+TGG + chr1.1:82235078-82235097 None:intergenic 15.0%
!!! TCTTACTTTGAAAAATAAAA+AGG + chr1.1:82236498-82236517 None:intergenic 15.0%
!!! TTCGTTTTTTTATAAAACTA+TGG - chr1.1:82234812-82234831 MS.gene74255:intron 15.0%
!!! TTTATGTATGATAGTTTTTA+GGG + chr1.1:82235317-82235336 None:intergenic 15.0%
!! AAAATAAGATAAAGGAAAAG+GGG + chr1.1:82234721-82234740 None:intergenic 20.0%
!! AGCTATTACGTATAATATAA+AGG - chr1.1:82235002-82235021 MS.gene74255:intron 20.0%
!! AGTATATATCTAAAAGAACA+AGG - chr1.1:82235082-82235101 MS.gene74255:intron 20.0%
!! ATTAATATTGTGAAAAGAGA+TGG + chr1.1:82233801-82233820 None:intergenic 20.0%
!! CAAAATAAGATAAAGGAAAA+GGG + chr1.1:82234722-82234741 None:intergenic 20.0%
!! CTAGCAAATGAATTAATAAT+AGG + chr1.1:82234234-82234253 None:intergenic 20.0%
!! GTAGAAAATATTTGAATTAC+TGG + chr1.1:82236635-82236654 None:intergenic 20.0%
!! GTCTATTAGAAACTTAATTA+AGG + chr1.1:82234458-82234477 None:intergenic 20.0%
!! TAAATGGTAGTTAAATACTA+TGG + chr1.1:82236423-82236442 None:intergenic 20.0%
!! TCTTTGTTAATGATAACTAA+CGG - chr1.1:82235200-82235219 MS.gene74255:intron 20.0%
!!! CTTTTCCTTTATCTTATTTT+GGG - chr1.1:82234721-82234740 MS.gene74255:intron 20.0%
!!! GTTGTTGTTGTTATTATTAT+CGG + chr1.1:82233631-82233650 None:intergenic 20.0%
!!! TACTTTGATTTGTTAATCAA+TGG - chr1.1:82236019-82236038 MS.gene74255:intron 20.0%
!!! TTATGTATGATAGTTTTTAG+GGG + chr1.1:82235316-82235335 None:intergenic 20.0%
!!! TTGTTGTTGTTATTATTATC+GGG + chr1.1:82233630-82233649 None:intergenic 20.0%
!!! TTTTCCTTTATCTTATTTTG+GGG - chr1.1:82234722-82234741 MS.gene74255:intron 20.0%
! AAAATGAAATAATGTGGTTG+TGG + chr1.1:82233832-82233851 None:intergenic 25.0%
! AAACAGTGTTAAACAAAAAG+GGG + chr1.1:82234489-82234508 None:intergenic 25.0%
! AAGTAGCTTGAAACATTATA+TGG - chr1.1:82236449-82236468 MS.gene74255:CDS 25.0%
! AATAAATTCCCAACTCAATA+AGG + chr1.1:82234764-82234783 None:intergenic 25.0%
! AATAATAGGTAAGGAAAGTT+AGG + chr1.1:82234220-82234239 None:intergenic 25.0%
! AATTATACCTTATCCATGTT+AGG + chr1.1:82234174-82234193 None:intergenic 25.0%
! ACTACTAAGGATAAAAACTA+GGG - chr1.1:82234381-82234400 MS.gene74255:intron 25.0%
! AGTGTTTAACTGTGTATTAT+AGG - chr1.1:82236728-82236747 MS.gene74255:intron 25.0%
! ATAAATTCCCAACTCAATAA+GGG + chr1.1:82234763-82234782 None:intergenic 25.0%
! ATTAGAAACTTAATTAAGGG+AGG + chr1.1:82234454-82234473 None:intergenic 25.0%
! CAAACAGTGTTAAACAAAAA+GGG + chr1.1:82234490-82234509 None:intergenic 25.0%
! CCAAAATAAGATAAAGGAAA+AGG + chr1.1:82234723-82234742 None:intergenic 25.0%
! GACATTCAATGAAAACTTAA+GGG + chr1.1:82234423-82234442 None:intergenic 25.0%
! GCATCTTCAATTGAATTTAT+AGG - chr1.1:82236668-82236687 MS.gene74255:intron 25.0%
! TAAGACAAAGTCAAAATCAA+TGG - chr1.1:82233375-82233394 MS.gene74255:intron 25.0%
! TACTACTAAGGATAAAAACT+AGG - chr1.1:82234380-82234399 MS.gene74255:intron 25.0%
! TGACATTCAATGAAAACTTA+AGG + chr1.1:82234424-82234443 None:intergenic 25.0%
! TGTAGTCAAAAATACTACTA+AGG - chr1.1:82234368-82234387 MS.gene74255:intron 25.0%
! TTAGAAACTTAATTAAGGGA+GGG + chr1.1:82234453-82234472 None:intergenic 25.0%
! TTAGTTCATAATTACAGAGT+AGG - chr1.1:82236580-82236599 MS.gene74255:CDS 25.0%
! TTATTGTCAGTATTGTGTTT+GGG - chr1.1:82234779-82234798 MS.gene74255:intron 25.0%
! TTGAGAAGAAGAAAATACTA+TGG + chr1.1:82233661-82233680 None:intergenic 25.0%
! TTTATGTATTTAAGGACTGA+TGG + chr1.1:82235392-82235411 None:intergenic 25.0%
! TTTATTGTCAGTATTGTGTT+TGG - chr1.1:82234778-82234797 MS.gene74255:intron 25.0%
!! ACAACTTTTGTTAGTGTTAT+TGG + chr1.1:82236370-82236389 None:intergenic 25.0%
!! ATTGTTATTATGATTGAGAG+TGG + chr1.1:82233327-82233346 None:intergenic 25.0%
!! CAAGCTACTTTAAGTTTAAA+TGG + chr1.1:82236439-82236458 None:intergenic 25.0%
!! TGCATAATCAACAACATTTT+CGG + chr1.1:82233550-82233569 None:intergenic 25.0%
!! TGTTGTTGTTATTATTATCG+GGG + chr1.1:82233629-82233648 None:intergenic 25.0%
!!! AGTAGCTTTTTTTCTTTCAT+TGG + chr1.1:82234541-82234560 None:intergenic 25.0%
!!! ATGTGAAGCTCTTTTTAATT+TGG + chr1.1:82236914-82236933 None:intergenic 25.0%
!!! ATTGCTTTGTTTAAAACTAG+AGG - chr1.1:82235242-82235261 MS.gene74255:intron 25.0%
!!! CCTTTTCCTTTATCTTATTT+TGG - chr1.1:82234720-82234739 MS.gene74255:intron 25.0%
!!! TGTGAAGCTCTTTTTAATTT+GGG + chr1.1:82236913-82236932 None:intergenic 25.0%
!!! TTGCTTTGTTTAAAACTAGA+GGG - chr1.1:82235243-82235262 MS.gene74255:intron 25.0%
AAACAGAAGCAGAAAGAAAA+AGG + chr1.1:82234046-82234065 None:intergenic 30.0%
AACAGTGTTAAACAAAAAGG+GGG + chr1.1:82234488-82234507 None:intergenic 30.0%
AAGGGGATGAAATTAAATAC+CGG + chr1.1:82234704-82234723 None:intergenic 30.0%
AAGGTAATGCACACATTAAT+TGG - chr1.1:82234297-82234316 MS.gene74255:intron 30.0%
AATTACTGGTAATACTCTCA+TGG + chr1.1:82236621-82236640 None:intergenic 30.0%
AGAACCCCAAAATAAGATAA+AGG + chr1.1:82234729-82234748 None:intergenic 30.0%
AGTTGTAGAAATAGTTTCAG+TGG - chr1.1:82236384-82236403 MS.gene74255:CDS 30.0%
ATAATTACAGAGTAGGTAGA+TGG - chr1.1:82236587-82236606 MS.gene74255:CDS 30.0%
ATGATAATAGTAAATGAGCC+AGG - chr1.1:82235027-82235046 MS.gene74255:intron 30.0%
CTTGTAGTAATGAAGTAGTT+AGG - chr1.1:82234340-82234359 MS.gene74255:intron 30.0%
GAAGCTCATTTACACTAAAA+TGG + chr1.1:82236196-82236215 None:intergenic 30.0%
GCAAACAGTGTTAAACAAAA+AGG + chr1.1:82234491-82234510 None:intergenic 30.0%
TAGCAGATAATACAGAGAAT+GGG - chr1.1:82236277-82236296 MS.gene74255:intron 30.0%
TTCAAATCCCTTATTGAGTT+GGG - chr1.1:82234753-82234772 MS.gene74255:intron 30.0%
TTTCAAATCCCTTATTGAGT+TGG - chr1.1:82234752-82234771 MS.gene74255:intron 30.0%
! AAAACTATGGTTGTTTCAAG+TGG - chr1.1:82234825-82234844 MS.gene74255:intron 30.0%
! AACTGTGAGACAATGATTTT+GGG + chr1.1:82234860-82234879 None:intergenic 30.0%
! ATAGCTTTACTTCATGTTGT+TGG + chr1.1:82234988-82235007 None:intergenic 30.0%
! ATGTTATTTAGTGAAACCTC+AGG - chr1.1:82235273-82235292 MS.gene74255:intron 30.0%
! CATTATATAGGCACTGTTTA+AGG - chr1.1:82234278-82234297 MS.gene74255:intron 30.0%
! CTTTAAAAAACCAGAAACAG+CGG - chr1.1:82235492-82235511 MS.gene74255:intron 30.0%
! TGTTATTTAGTGAAACCTCA+GGG - chr1.1:82235274-82235293 MS.gene74255:intron 30.0%
!! ATTTTTGATTGAATTGCAGC+TGG - chr1.1:82233438-82233457 MS.gene74255:intron 30.0%
!! TGCTTTGTTTAAAACTAGAG+GGG - chr1.1:82235244-82235263 MS.gene74255:intron 30.0%
!! TTTTTGATTGAATTGCAGCT+GGG - chr1.1:82233439-82233458 MS.gene74255:intron 30.0%
!!! CCTTTTTTTTCGTCTATAAC+CGG - chr1.1:82234682-82234701 MS.gene74255:intron 30.0%
!!! GCTGTTTCTGGTTTTTTAAA+GGG + chr1.1:82235493-82235512 None:intergenic 30.0%
AACAAGTTATTCAGACATGC+TGG - chr1.1:82236785-82236804 MS.gene74255:CDS 35.0%
AAGTCTGAATTGAGTTTCAC+TGG - chr1.1:82233495-82233514 MS.gene74255:intron 35.0%
ACAATAATACTCTCAAGTCC+AGG + chr1.1:82235962-82235981 None:intergenic 35.0%
ACAGTGTTAAACAAAAAGGG+GGG + chr1.1:82234487-82234506 None:intergenic 35.0%
AGAAAGAAGAATGCTAGACA+TGG - chr1.1:82235124-82235143 MS.gene74255:intron 35.0%
ATTCGACTATACAAAGAGTC+AGG - chr1.1:82236539-82236558 MS.gene74255:CDS 35.0%
ATTCTACTCAGTAGAAGCTA+CGG + chr1.1:82236868-82236887 None:intergenic 35.0%
CCGGTTATAGACGAAAAAAA+AGG + chr1.1:82234685-82234704 None:intergenic 35.0%
CTATTGCAATACATGTATGC+AGG - chr1.1:82234098-82234117 MS.gene74255:intron 35.0%
GAAAGTTAGGAAGCAAAAGT+TGG + chr1.1:82234207-82234226 None:intergenic 35.0%
GAGAGAAGAACTAGAATAAG+TGG - chr1.1:82234120-82234139 MS.gene74255:intron 35.0%
GTAGCAGATAATACAGAGAA+TGG - chr1.1:82236276-82236295 MS.gene74255:intron 35.0%
GTATTGTGTTTGGGAAGATA+TGG - chr1.1:82234788-82234807 MS.gene74255:intron 35.0%
GTGTAACTGAAAGAAAACCT+GGG - chr1.1:82235528-82235547 MS.gene74255:intron 35.0%
GTTATTTAGTGAAACCTCAG+GGG - chr1.1:82235275-82235294 MS.gene74255:intron 35.0%
TAGAATCGTCTGATACTACT+CGG - chr1.1:82235906-82235925 MS.gene74255:intron 35.0%
TCACAGTAAAACATACTCTC+CGG + chr1.1:82236068-82236087 None:intergenic 35.0%
TGTGTAACTGAAAGAAAACC+TGG - chr1.1:82235527-82235546 MS.gene74255:intron 35.0%
TTATTCAGACATGCTGGATT+TGG - chr1.1:82236791-82236810 MS.gene74255:CDS 35.0%
! CAACTGTGAGACAATGATTT+TGG + chr1.1:82234861-82234880 None:intergenic 35.0%
! GGTTTTCTTTCAGTTACACA+TGG + chr1.1:82235527-82235546 None:intergenic 35.0%
!! ATGACATTTCCAGCTTGTTA+TGG + chr1.1:82235173-82235192 None:intergenic 35.0%
!! TTTTGATTGAATTGCAGCTG+GGG - chr1.1:82233440-82233459 MS.gene74255:intron 35.0%
!!! CGCTGTTTCTGGTTTTTTAA+AGG + chr1.1:82235494-82235513 None:intergenic 35.0%
AAATAATGTTGTCCCGTTCC+AGG + chr1.1:82233152-82233171 None:intergenic 40.0%
AACTGAAAGAAAACCTGGGT+AGG - chr1.1:82235532-82235551 MS.gene74255:intron 40.0%
AAGATCTCTGCTGTTGTTGT+TGG + chr1.1:82233220-82233239 None:intergenic 40.0%
ACAAATGAACCCCTCAATGA+AGG - chr1.1:82234567-82234586 MS.gene74255:intron 40.0%
ACACTTCCTTTGCTGAAACA+CGG + chr1.1:82235708-82235727 None:intergenic 40.0%
ACATGGATGGAATTGGCATA+AGG - chr1.1:82235141-82235160 MS.gene74255:intron 40.0%
AGAAGAATGCTAGACATGGA+TGG - chr1.1:82235128-82235147 MS.gene74255:intron 40.0%
AGGTCTTCAAACTCAAGTTC+AGG - chr1.1:82236830-82236849 MS.gene74255:CDS 40.0%
AGTAGCCTCTTAACTTAACG+TGG + chr1.1:82234514-82234533 None:intergenic 40.0%
ATGCTAGACATGGATGGAAT+TGG - chr1.1:82235134-82235153 MS.gene74255:intron 40.0%
CAGTGTTAAACAAAAAGGGG+GGG + chr1.1:82234486-82234505 None:intergenic 40.0%
CATACTAGTACCAATACCTG+GGG - chr1.1:82233597-82233616 MS.gene74255:intron 40.0%
CATAGAGAAGAAGGACAAGA+AGG - chr1.1:82234620-82234639 MS.gene74255:intron 40.0%
CATCTATGTTCAAAGCAAGC+AGG + chr1.1:82236153-82236172 None:intergenic 40.0%
CATTGAGGCAATGTAGAAGA+AGG + chr1.1:82233761-82233780 None:intergenic 40.0%
CCTTATCCATGTTAGGTACA+AGG + chr1.1:82234167-82234186 None:intergenic 40.0%
CCTTGTACCTAACATGGATA+AGG - chr1.1:82234164-82234183 MS.gene74255:intron 40.0%
CTTCTTGTCCTTCTTCTCTA+TGG + chr1.1:82234622-82234641 None:intergenic 40.0%
GCATACTAGTACCAATACCT+GGG - chr1.1:82233596-82233615 MS.gene74255:intron 40.0%
GGGGAATATTATGCATAAGC+TGG + chr1.1:82233922-82233941 None:intergenic 40.0%
GGTGAATTGTTTCCCTTTAG+AGG - chr1.1:82236040-82236059 MS.gene74255:intron 40.0%
GGTTCAACAACCTTCATTGA+GGG + chr1.1:82234580-82234599 None:intergenic 40.0%
GTAACTCAAGTCACTCTCTT+TGG + chr1.1:82236120-82236139 None:intergenic 40.0%
GTAGCCTCTTAACTTAACGT+GGG + chr1.1:82234513-82234532 None:intergenic 40.0%
GTGGGAGACTATACTGAATT+AGG + chr1.1:82233880-82233899 None:intergenic 40.0%
GTTCAACAACCTTCATTGAG+GGG + chr1.1:82234579-82234598 None:intergenic 40.0%
GTTGTTCTCCATAGAGAAGA+AGG - chr1.1:82234611-82234630 MS.gene74255:intron 40.0%
GTTGTTGAACCACTCAGTAA+AGG - chr1.1:82234589-82234608 MS.gene74255:intron 40.0%
TAAGCTTCTACCGTCAACTT+TGG - chr1.1:82236244-82236263 MS.gene74255:intron 40.0%
TATGATTGAGAGTGGCTAGA+TGG + chr1.1:82233319-82233338 None:intergenic 40.0%
TCTGAATTGAGTTTCACTGG+TGG - chr1.1:82233498-82233517 MS.gene74255:intron 40.0%
TGCATACTAGTACCAATACC+TGG - chr1.1:82233595-82233614 MS.gene74255:intron 40.0%
TGGTTCAACAACCTTCATTG+AGG + chr1.1:82234581-82234600 None:intergenic 40.0%
TTGGCGGTTCAACATATCAA+AGG - chr1.1:82236810-82236829 MS.gene74255:CDS 40.0%
TTTACAAGGGACGGAATCTT+GGG + chr1.1:82233942-82233961 None:intergenic 40.0%
TTTGAGAACCGTAGTTCAGT+TGG - chr1.1:82235594-82235613 MS.gene74255:intron 40.0%
TTTGATTGAATTGCAGCTGG+GGG - chr1.1:82233441-82233460 MS.gene74255:intron 40.0%
TTTGCCCACGTTAAGTTAAG+AGG - chr1.1:82234506-82234525 MS.gene74255:intron 40.0%
! AACTAACGGTGTTAACCCAA+GGG - chr1.1:82235214-82235233 MS.gene74255:intron 40.0%
! CGATCATGACTACATTGGTT+AGG - chr1.1:82235936-82235955 MS.gene74255:CDS 40.0%
! TAACTAACGGTGTTAACCCA+AGG - chr1.1:82235213-82235232 MS.gene74255:intron 40.0%
! TTGACCACTGTAGTTTGTCT+CGG - chr1.1:82234907-82234926 MS.gene74255:intron 40.0%
! TTTTACAAGGGACGGAATCT+TGG + chr1.1:82233943-82233962 None:intergenic 40.0%
!! GAAGCAAAAGTTGGTAGCAT+GGG + chr1.1:82234198-82234217 None:intergenic 40.0%
AAATGAGCCAGGAAAGTTGC+AGG - chr1.1:82235038-82235057 MS.gene74255:intron 45.0%
AACAAAGCAATCACCTCCCT+TGG + chr1.1:82235233-82235252 None:intergenic 45.0%
AACCAGAAACAGCGGAAGTA+AGG - chr1.1:82235500-82235519 MS.gene74255:intron 45.0%
AACGACATCACAGAGAAGAG+AGG - chr1.1:82235633-82235652 MS.gene74255:intron 45.0%
AAGAAGGTCGGGATCATCAT+TGG + chr1.1:82233745-82233764 None:intergenic 45.0%
AAGGTCTGTTGCGAAACAGA+TGG - chr1.1:82235771-82235790 MS.gene74255:intron 45.0%
AATCGTCTGATACTACTCGG+CGG - chr1.1:82235909-82235928 MS.gene74255:intron 45.0%
ACAAAGCAATCACCTCCCTT+GGG + chr1.1:82235232-82235251 None:intergenic 45.0%
ACAGAGCTCCATCAGTCAAA+CGG - chr1.1:82233040-82233059 MS.gene74255:intron 45.0%
ACAGAGGAAGGCAGAAATGA+AGG - chr1.1:82235455-82235474 MS.gene74255:intron 45.0%
ACTAGACCGTGAGAGAGTAA+GGG - chr1.1:82235658-82235677 MS.gene74255:intron 45.0%
ACTATAGCCTGCAACTTTCC+TGG + chr1.1:82235048-82235067 None:intergenic 45.0%
AGATGGTACCTGAGTTTCGA+GGG + chr1.1:82233784-82233803 None:intergenic 45.0%
AGGAGAATGCCATAACAAGC+TGG - chr1.1:82235161-82235180 MS.gene74255:intron 45.0%
AGGCAATGTAGAAGAAGGTC+GGG + chr1.1:82233756-82233775 None:intergenic 45.0%
ATCCTCGTAGCATTGCTGAA+CGG - chr1.1:82233990-82234009 MS.gene74255:intron 45.0%
ATTGCCGAGACAAACTACAG+TGG + chr1.1:82234914-82234933 None:intergenic 45.0%
ATTTAGTGAAACCTCAGGGG+AGG - chr1.1:82235278-82235297 MS.gene74255:intron 45.0%
CAGCAGAGATCTTCTTACGA+AGG - chr1.1:82233227-82233246 MS.gene74255:intron 45.0%
CCATCTCCAGAGAAGTTTGT+GGG + chr1.1:82233898-82233917 None:intergenic 45.0%
CTGCTACCATCCAAAGTTGA+CGG + chr1.1:82236257-82236276 None:intergenic 45.0%
CTTCTACCGTCAACTTTGGA+TGG - chr1.1:82236248-82236267 MS.gene74255:intron 45.0%
GAATTGAGTTTCACTGGTGG+AGG - chr1.1:82233501-82233520 MS.gene74255:intron 45.0%
GAGGCAATGTAGAAGAAGGT+CGG + chr1.1:82233757-82233776 None:intergenic 45.0%
GGAGAACAACCTTTACTGAG+TGG + chr1.1:82234601-82234620 None:intergenic 45.0%
GTACCAGACCAGTTTCAGAA+AGG - chr1.1:82235752-82235771 MS.gene74255:intron 45.0%
GTTCGCGATCATGACTACAT+TGG - chr1.1:82235931-82235950 MS.gene74255:CDS 45.0%
TAGTCTCCCACAAACTTCTC+TGG - chr1.1:82233889-82233908 MS.gene74255:intron 45.0%
TAGTGTCCGTGTTTCAGCAA+AGG - chr1.1:82235699-82235718 MS.gene74255:intron 45.0%
TCAGACGATTCTACGATCCA+CGG + chr1.1:82235899-82235918 None:intergenic 45.0%
TCCATCTCCAGAGAAGTTTG+TGG + chr1.1:82233899-82233918 None:intergenic 45.0%
TCTTCTTACGAAGGTCAAGC+TGG - chr1.1:82233236-82233255 MS.gene74255:intron 45.0%
TGATCCTCCTACTCCTATGA+TGG + chr1.1:82233120-82233139 None:intergenic 45.0%
TTACAAGGGACGGAATCTTG+GGG + chr1.1:82233941-82233960 None:intergenic 45.0%
TTCAGACATGCTGGATTTGG+CGG - chr1.1:82236794-82236813 MS.gene74255:CDS 45.0%
TTGATTGAATTGCAGCTGGG+GGG - chr1.1:82233442-82233461 MS.gene74255:intron 45.0%
! ATCTCTGCTGTTGTTGTTGG+TGG + chr1.1:82233217-82233236 None:intergenic 45.0%
! ATGACTACATTGGTTAGGCC+TGG - chr1.1:82235941-82235960 MS.gene74255:CDS 45.0%
! CGAGTTTGAAGCAGGACTAT+AGG + chr1.1:82235811-82235830 None:intergenic 45.0%
! GCTTGGCACGGATTTTACAA+GGG + chr1.1:82233955-82233974 None:intergenic 45.0%
! TGGCAAGTTGAAGAAGTTGC+AGG - chr1.1:82234140-82234159 MS.gene74255:intron 45.0%
! TGTACTTTGTTTGCATCCGC+AGG + chr1.1:82237096-82237115 None:intergenic 45.0%
! TTGTTTCCCTTTAGAGGAGC+CGG - chr1.1:82236046-82236065 MS.gene74255:intron 45.0%
!! AGACCTTTCTGAAACTGGTC+TGG + chr1.1:82235758-82235777 None:intergenic 45.0%
!! GCAACAGACCTTTCTGAAAC+TGG + chr1.1:82235763-82235782 None:intergenic 45.0%
!! GGAAGCAAAAGTTGGTAGCA+TGG + chr1.1:82234199-82234218 None:intergenic 45.0%
!! TATTATTATTATTATTAGTT+TGG + chr1.1:82233686-82233705 None:intergenic 5.0%
!!! ATTATTATTATTATTAGTTT+GGG + chr1.1:82233685-82233704 None:intergenic 5.0%
AATTGCACTAACCTCCCCTG+AGG + chr1.1:82235292-82235311 None:intergenic 50.0%
ACCACTGTGGATGCCATCAT+AGG - chr1.1:82233104-82233123 MS.gene74255:intron 50.0%
ACTAGTACCAATACCTGGGG+TGG - chr1.1:82233600-82233619 MS.gene74255:intron 50.0%
AGCAATGCTACGAGGATGAG+TGG + chr1.1:82233987-82234006 None:intergenic 50.0%
AGTTGAGAACATGTCGCACG+CGG - chr1.1:82235562-82235581 MS.gene74255:intron 50.0%
ATACTCTCCGGCTCCTCTAA+AGG + chr1.1:82236056-82236075 None:intergenic 50.0%
ATCACGCCTTCTTCCTGGAA+CGG - chr1.1:82233136-82233155 MS.gene74255:intron 50.0%
ATCCGCAGGTGCAATTCTCA+AGG + chr1.1:82237082-82237101 None:intergenic 50.0%
CAAACGGGTCTCACAAGGTA+TGG - chr1.1:82233056-82233075 MS.gene74255:intron 50.0%
CAGAGCTCCATCAGTCAAAC+GGG - chr1.1:82233041-82233060 MS.gene74255:intron 50.0%
CAGCAATCCTGGCTGTATGA+CGG - chr1.1:82235860-82235879 MS.gene74255:intron 50.0%
CCTTCCTCTGTCTGAACTGT+GGG + chr1.1:82235446-82235465 None:intergenic 50.0%
CTAGACCGTGAGAGAGTAAG+GGG - chr1.1:82235659-82235678 MS.gene74255:intron 50.0%
CTGTTGTTGCTGAGACGAAG+AGG + chr1.1:82233024-82233043 None:intergenic 50.0%
GAAGAAGAACCCGATGAGGA+AGG + chr1.1:82232999-82233018 None:intergenic 50.0%
GACCTTGAGAATTGCACCTG+CGG - chr1.1:82237077-82237096 MS.gene74255:CDS 50.0%
GACTAGACCGTGAGAGAGTA+AGG - chr1.1:82235657-82235676 MS.gene74255:intron 50.0%
GAGAACCGTAGTTCAGTTGG+CGG - chr1.1:82235597-82235616 MS.gene74255:intron 50.0%
GAGATGGTACCTGAGTTTCG+AGG + chr1.1:82233785-82233804 None:intergenic 50.0%
GATGCCATCATAGGAGTAGG+AGG - chr1.1:82233113-82233132 MS.gene74255:intron 50.0%
GATTATGCATCAGCAGCAGC+TGG - chr1.1:82233561-82233580 MS.gene74255:intron 50.0%
GCAGGACCTTGTACCTAACA+TGG - chr1.1:82234158-82234177 MS.gene74255:intron 50.0%
GGAAGAAGAAGAACCCGATG+AGG + chr1.1:82233003-82233022 None:intergenic 50.0%
GGCTAGATGGTTGAGAAAGC+CGG + chr1.1:82233306-82233325 None:intergenic 50.0%
GTATCGTCCACCTTCCTCAT+CGG - chr1.1:82232986-82233005 MS.gene74255:CDS 50.0%
GTCGGGATCATCATTGGTGT+CGG + chr1.1:82233739-82233758 None:intergenic 50.0%
GTGGATGCCATCATAGGAGT+AGG - chr1.1:82233110-82233129 MS.gene74255:intron 50.0%
GTTTGCCCCTTACTCTCTCA+CGG + chr1.1:82235667-82235686 None:intergenic 50.0%
TACTCTCCGGCTCCTCTAAA+GGG + chr1.1:82236055-82236074 None:intergenic 50.0%
TATCGTCCACCTTCCTCATC+GGG - chr1.1:82232987-82233006 MS.gene74255:CDS 50.0%
TCAGTCAAACGGGTCTCACA+AGG - chr1.1:82233051-82233070 MS.gene74255:intron 50.0%
TCCTATGATGGCATCCACAG+TGG + chr1.1:82233108-82233127 None:intergenic 50.0%
TCCTCGTAGCATTGCTGAAC+GGG - chr1.1:82233991-82234010 MS.gene74255:intron 50.0%
TCTTACGAAGGTCAAGCTGG+TGG - chr1.1:82233239-82233258 MS.gene74255:intron 50.0%
TGTAAAATCCGTGCCAAGCG+TGG - chr1.1:82233956-82233975 MS.gene74255:intron 50.0%
TGTATGACGGCAAGGAACCA+TGG - chr1.1:82235873-82235892 MS.gene74255:intron 50.0%
TGTGAGACCCGTTTGACTGA+TGG + chr1.1:82233051-82233070 None:intergenic 50.0%
TTCACCCACAGTTCAGACAG+AGG - chr1.1:82235439-82235458 MS.gene74255:intron 50.0%
! CCCACAAACTTCTCTGGAGA+TGG - chr1.1:82233895-82233914 MS.gene74255:intron 50.0%
! CGCTTGGCACGGATTTTACA+AGG + chr1.1:82233956-82233975 None:intergenic 50.0%
! GACCTTACTTCCGCTGTTTC+TGG + chr1.1:82235505-82235524 None:intergenic 50.0%
! GCTTTTCTGACGGAGCAAAG+CGG + chr1.1:82233276-82233295 None:intergenic 50.0%
! GGCACGGATTTTACAAGGGA+CGG + chr1.1:82233951-82233970 None:intergenic 50.0%
! TAACGGTGTTAACCCAAGGG+AGG - chr1.1:82235217-82235236 MS.gene74255:intron 50.0%
! TCAACTTTTGCTGCCTACCC+AGG + chr1.1:82235548-82235567 None:intergenic 50.0%
! TCTGCTGTTGTTGTTGGTGG+TGG + chr1.1:82233214-82233233 None:intergenic 50.0%
! TGAACTCGCGAGTTTGAAGC+AGG + chr1.1:82235819-82235838 None:intergenic 50.0%
AACCGTAGTTCAGTTGGCGG+TGG - chr1.1:82235600-82235619 MS.gene74255:intron 55.0%
ACCCGTTCAGCAATGCTACG+AGG + chr1.1:82233995-82234014 None:intergenic 55.0%
AGATGGTTGAGAAAGCCGGC+TGG + chr1.1:82233302-82233321 None:intergenic 55.0%
AGTACCAATACCTGGGGTGG+AGG - chr1.1:82233603-82233622 MS.gene74255:intron 55.0%
ATCCTGGCTGTATGACGGCA+AGG - chr1.1:82235865-82235884 MS.gene74255:intron 55.0%
CATACAGCCAGGATTGCTGG+AGG + chr1.1:82235859-82235878 None:intergenic 55.0%
CCCACAGTTCAGACAGAGGA+AGG - chr1.1:82235443-82235462 MS.gene74255:intron 55.0%
CCTCAATGCCCTCGAAACTC+AGG - chr1.1:82233773-82233792 MS.gene74255:intron 55.0%
CGTCAGAAAAGCTCTCCAGC+CGG - chr1.1:82233284-82233303 MS.gene74255:CDS 55.0%
CGTCATACAGCCAGGATTGC+TGG + chr1.1:82235862-82235881 None:intergenic 55.0%
CTCTCTCCTCAACACCACTG+TGG - chr1.1:82233091-82233110 MS.gene74255:intron 55.0%
GAAGAACCCGATGAGGAAGG+TGG + chr1.1:82232996-82233015 None:intergenic 55.0%
GATTCTACGATCCACGGCCA+TGG + chr1.1:82235893-82235912 None:intergenic 55.0%
GCATCAGCAGCAGCTGGAAA+TGG - chr1.1:82233567-82233586 MS.gene74255:intron 55.0%
GCCTTCCTCTGTCTGAACTG+TGG + chr1.1:82235447-82235466 None:intergenic 55.0%
GTTGTCCCGTTCCAGGAAGA+AGG + chr1.1:82233145-82233164 None:intergenic 55.0%
TCACGCCTTCTTCCTGGAAC+GGG - chr1.1:82233137-82233156 MS.gene74255:intron 55.0%
TGGGGGGTTCACAATCACGA+GGG - chr1.1:82233458-82233477 MS.gene74255:intron 55.0%
TTCCTTGCCGTCATACAGCC+AGG + chr1.1:82235870-82235889 None:intergenic 55.0%
! CGGCTGGAGAGCTTTTCTGA+CGG + chr1.1:82233286-82233305 None:intergenic 55.0%
! GATTGCTGGAGGTGTGTCCA+CGG + chr1.1:82235848-82235867 None:intergenic 55.0%
! GTGGTGTTGAGGAGAGAGCT+AGG + chr1.1:82233089-82233108 None:intergenic 55.0%
! TGGCATCCACAGTGGTGTTG+AGG + chr1.1:82233100-82233119 None:intergenic 55.0%
!! CCTGAGTTTCGAGGGCATTG+AGG + chr1.1:82233776-82233795 None:intergenic 55.0%
!! GGTCAAGCTGGTGGCTTTGA+TGG - chr1.1:82233248-82233267 MS.gene74255:intron 55.0%
ATGAGTGGCGCATCCACGCT+TGG + chr1.1:82233972-82233991 None:intergenic 60.0%
CGCCACCGCCAACTGAACTA+CGG + chr1.1:82235605-82235624 None:intergenic 60.0%
CTGCTGTTGCTGCTGCTGCT+GGG + chr1.1:82233189-82233208 None:intergenic 60.0%
CTGGGGGGTTCACAATCACG+AGG - chr1.1:82233457-82233476 MS.gene74255:intron 60.0%
GGACACACCTCCAGCAATCC+TGG - chr1.1:82235849-82235868 MS.gene74255:intron 60.0%
GGAGGATCACGCCTTCTTCC+TGG - chr1.1:82233131-82233150 MS.gene74255:intron 60.0%
GGGGGGTTCACAATCACGAG+GGG - chr1.1:82233459-82233478 MS.gene74255:intron 60.0%
TGAGAACATGTCGCACGCGG+CGG - chr1.1:82235565-82235584 MS.gene74255:intron 60.0%
ACGGCAAGGAACCATGGCCG+TGG - chr1.1:82235879-82235898 MS.gene74255:intron 65.0%
ATTATCGGGGCCTCCACCCC+AGG + chr1.1:82233616-82233635 None:intergenic 65.0%
GCTGCTGTTGCTGCTGCTGC+TGG + chr1.1:82233190-82233209 None:intergenic 65.0%
GTTCAGTTGGCGGTGGCGCA+AGG - chr1.1:82235607-82235626 MS.gene74255:intron 65.0%
TCGCGAGTTCAAACCCGCCG+TGG - chr1.1:82235828-82235847 MS.gene74255:intron 65.0%
TGGCGCATCCACGCTTGGCA+CGG + chr1.1:82233967-82233986 None:intergenic 65.0%
! TGCTGGAGGTGTGTCCACGG+CGG + chr1.1:82235845-82235864 None:intergenic 65.0%
CAGTTGGCGGTGGCGCAAGG+AGG - chr1.1:82235610-82235629 MS.gene74255:intron 70.0%
GGGGCCTCCACCCCAGGTAT+TGG + chr1.1:82233610-82233629 None:intergenic 70.0%
! GCTGGAGGTGTGTCCACGGC+GGG + chr1.1:82235844-82235863 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 82232984 82237118 82232984 ID=MS.gene74255
chr1.1 mRNA 82232984 82237118 82232984 ID=MS.gene74255.t1;Parent=MS.gene74255
chr1.1 exon 82236746 82237118 82236746 ID=MS.gene74255.t1.exon1;Parent=MS.gene74255.t1
chr1.1 CDS 82236746 82237118 82236746 ID=cds.MS.gene74255.t1;Parent=MS.gene74255.t1
chr1.1 exon 82236308 82236645 82236308 ID=MS.gene74255.t1.exon2;Parent=MS.gene74255.t1
chr1.1 CDS 82236308 82236645 82236308 ID=cds.MS.gene74255.t1;Parent=MS.gene74255.t1
chr1.1 exon 82236090 82236215 82236090 ID=MS.gene74255.t1.exon3;Parent=MS.gene74255.t1
chr1.1 CDS 82236090 82236215 82236090 ID=cds.MS.gene74255.t1;Parent=MS.gene74255.t1
chr1.1 exon 82235917 82235982 82235917 ID=MS.gene74255.t1.exon4;Parent=MS.gene74255.t1
chr1.1 CDS 82235917 82235982 82235917 ID=cds.MS.gene74255.t1;Parent=MS.gene74255.t1
chr1.1 exon 82233251 82233319 82233251 ID=MS.gene74255.t1.exon5;Parent=MS.gene74255.t1
chr1.1 CDS 82233251 82233319 82233251 ID=cds.MS.gene74255.t1;Parent=MS.gene74255.t1
chr1.1 exon 82232984 82233037 82232984 ID=MS.gene74255.t1.exon6;Parent=MS.gene74255.t1
chr1.1 CDS 82232984 82233037 82232984 ID=cds.MS.gene74255.t1;Parent=MS.gene74255.t1
Gene Sequence

>MS.gene74255

ATGTATCGTCCACCTTCCTCATCGGGTTCTTCTTCTTCCTCTTCGTCTCAGCAACAACAGAGCTCCATCAGTCAAACGGGTCTCACAAGGTATGGTTCTGCACCTAGCTCTCTCCTCAACACCACTGTGGATGCCATCATAGGAGTAGGAGGATCACGCCTTCTTCCTGGAACGGGACAACATTATTTCTCTGATGACACTACCCAGCAGCAGCAGCAACAGCAGCACCACCACCAACAACAACAGCAGAGATCTTCTTACGAAGGTCAAGCTGGTGGCTTTGATGGATCCGCTTTGCTCCGTCAGAAAAGCTCTCCAGCCGGCTTTCTCAACCATCTAGCCACTCTCAATCATAATAACAATAACAATAACGGTATATGTTTGTTTTTATTAAGACAAAGTCAAAATCAATGGATTATATTAGATCTCATAAAGAGTAAGTAATAGTATTAGTATTTTTGATTGAATTGCAGCTGGGGGGTTCACAATCACGAGGGGCAATTCAAGATTGAAGTCTGAATTGAGTTTCACTGGTGGAGGACAAGAATGTCTTTCTCGAATATCCGAAAATGTTGTTGATTATGCATCAGCAGCAGCTGGAAATGGATCATTGCATACTAGTACCAATACCTGGGGTGGAGGCCCCGATAATAATAACAACAACAACTCAAATTCCATAGTATTTTCTTCTTCTCAAACCCAAACTAATAATAATAATAATAATAATAATAGTAAGAAGCGTTCTAGTAGAACCGACACCAATGATGATCCCGACCTTCTTCTACATTGCCTCAATGCCCTCGAAACTCAGGTACCATCTCTTTTCACAATATTAATTCTTTCATCCACAACCACATTATTTCATTTTTAGTTACTAATTCAATATTTCTACTCCTAATTCAGTATAGTCTCCCACAAACTTCTCTGGAGATGGACCAGCTTATGCATAATATTCCCCAAGATTCCGTCCCTTGTAAAATCCGTGCCAAGCGTGGATGCGCCACTCATCCTCGTAGCATTGCTGAACGGGTAATTAATTCATTCATTACTCTACTCTTTCCTTTTTCTTTCTGCTTCTGTTTCAAAATACTACTCTCTACTGTATATAACAACTCTATTGCAATACATGTATGCAGGAGAGAAGAACTAGAATAAGTGGCAAGTTGAAGAAGTTGCAGGACCTTGTACCTAACATGGATAAGGTATAATTACCCATGCTACCAACTTTTGCTTCCTAACTTTCCTTACCTATTATTAATTCATTTGCTAGTATTTATGTTTCCTAATTTATCATCATTATATAGGCACTGTTTAAGGTAATGCACACATTAATTGGAATGTTTCAATGTAGTTGTACTTGTAGTAATGAAGTAGTTAGGTGCAATGTAGTCAAAAATACTACTAAGGATAAAAACTAGGGAAAATTAAATTGAGCTCCCTTAAGTTTTCATTGAATGTCACAAACACCCTCCCTTAATTAAGTTTCTAATAGACACAAACCCCCCCTTTTTGTTTAACACTGTTTGCCCACGTTAAGTTAAGAGGCTACTCATACCAATGAAAGAAAAAAAGCTACTCTACTCACAAATGAACCCCTCAATGAAGGTTGTTGAACCACTCAGTAAAGGTTGTTCTCCATAGAGAAGAAGGACAAGAAGGCAGAAATAATATTCATTTATGAATCTCGCAGTAATTTCTCCTTTTTTTTCGTCTATAACCGGTATTTAATTTCATCCCCTTTTCCTTTATCTTATTTTGGGGTTCTATATTTCAAATCCCTTATTGAGTTGGGAATTTATTGTCAGTATTGTGTTTGGGAAGATATGGTTTCGTTTTTTTATAAAACTATGGTTGTTTCAAGTGGAGATTCATACCCAAAATCATTGTCTCACAGTTGTAGATTGCTACTAAAATTTAAATTATTTGACCACTGTAGTTTGTCTCGGCAATCAGTCAAGTTCAAGATACTTATCAGCGATAATCTAGTTTATGAAACTATAGCCAACAACATGAAGTAAAGCTATTACGTATAATATAAAGGTCATGATAATAGTAAATGAGCCAGGAAAGTTGCAGGCTATAGTAGAAAAGCCATAAAAGTATATATCTAAAAGAACAAGGAATCGATGTTGATTTCATGAGAAAGAAGAATGCTAGACATGGATGGAATTGGCATAAGGAGAATGCCATAACAAGCTGGAAATGTCATTTGTGCTTCTTTGTTAATGATAACTAACGGTGTTAACCCAAGGGAGGTGATTGCTTTGTTTAAAACTAGAGGGGCTCTCTATGTTATTTAGTGAAACCTCAGGGGAGGTTAGTGCAATTTCCCCTAAAAACTATCATACATAAATAAAACAACATCTAAATCACAACATCAAACTAAGTTAATTAGACATTCATAACCATCAGTCCTTAAATACATAAATAATTCAAATCTAAGTTCATAAATAAATTCACCCACAGTTCAGACAGAGGAAGGCAGAAATGAAGGAAAAAAAAACAGCCCTTTAAAAAACCAGAAACAGCGGAAGTAAGGTCCATGTGTAACTGAAAGAAAACCTGGGTAGGCAGCAAAAGTTGAGAACATGTCGCACGCGGCGGCACACATTTGAGAACCGTAGTTCAGTTGGCGGTGGCGCAAGGAGGAACGACATCACAGAGAAGAGAGGAGACTAGACCGTGAGAGAGTAAGGGGCAAACTTTTCTTACTTTTAGTGTCCGTGTTTCAGCAAAGGAAGTGTTCAAGAAGCACAAGTGTTTTCACAGTACCAGACCAGTTTCAGAAAGGTCTGTTGCGAAACAGATGGCTCAAATTTGTGATCCTATAGTCCTGCTTCAAACTCGCGAGTTCAAACCCGCCGTGGACACACCTCCAGCAATCCTGGCTGTATGACGGCAAGGAACCATGGCCGTGGATCGTAGAATCGTCTGATACTACTCGGCGGTTCGCGATCATGACTACATTGGTTAGGCCTGGACTTGAGAGTATTATTGTAACAAACTCTTGAATTTTCATGAGTACTTGCAATATCTACTTTGATTTGTTAATCAATGGTGAATTGTTTCCCTTTAGAGGAGCCGGAGAGTATGTTTTACTGTGAATTAGAGTCTTTAATCTTGAATCTTGATGCCAAAGAGAGTGACTTGAGTTACTTTGTACTTGCCTGCTTGCTTTGAACATAGATGAATGTAAGTGATACTACAGTCCATTTTAGTGTAAATGAGCTTCTAAACGACATTTTTCTTTCTATTTTATTTAAGCTTCTACCGTCAACTTTGGATGGTAGCAGTAGCAGATAATACAGAGAATGGGTGTTTCAGCTTCATTTCTTTTCTTTCTAAAATACAAAGTCAATGATAAAATTATTCAAAATCAATTGCCAATAACACTAACAAAAGTTGTAGAAATAGTTTCAGTGGAATGATTATTCATCCATAGTATTTAACTACCATTTAAACTTAAAGTAGCTTGAAACATTATATGGAACTAGAATTTTGCTTATGCTTTCCTTTTTATTTTTCAAAGTAAGATTTATGTGCAAGAATTGAAAAATTCGACTATACAAAGAGTCAGGATCAAGTTCCAAGTTAAATTAGTTCATAATTACAGAGTAGGTAGATGGCTTTTATGCCATGAGAGTATTACCAGTAATTCAAATATTTTCTACAATAAGTATTGGAGCATCTTCAATTGAATTTATAGGATTACTCGATAACATCACATAATATGTATGTCAAACTAGTGTTTAACTGTGTATTATAGGTTGCTTAATGTTGTTTCAAAATGTGACTGTAGCAAACAAGTTATTCAGACATGCTGGATTTGGCGGTTCAACATATCAAAGGTCTTCAAACTCAAGTTCAGGTGTGTAAAGCTACCGTAGCTTCTACTGAGTAGAATATTCTTTATATATATGTATATTCCCAAATTAAAAAGAGCTTCACATGAATACAGCATTCTTAAAAATTAATATTTCATTGATAGGCTAGTACATACTACTGTTAAAAATAAAGTGTTTGCATTCTGTAATTCTTAATACTCTGTTGATCTTGACTATATCTTTTCACTACTTTGCAGAAGCTTCACGAAGACCTTGAGAATTGCACCTGCGGATGCAAACAAAGTACATAA
Protein sequence

>MS.gene74255.t1

MYRPPSSSGSSSSSSSQQQQSSISQTGLTRYGSAPSSLLNTTVDAIIGVGGSRLLPGTGQHYFSDDTTQQQQQQQHHHQQQQQRSSYEGQAGGFDGSALLRQKSSPAGFLNHLATLNHNNNNNNAGGFTITRGNSRLKSELSFTGGGQECLSRISENVVDYASAAAGNGSLHTSTNTWGGGPDNNNNNNSNSIVFSSSQTQTNNNNNNNNSKKRSSRTDTNDDPDLLLHCLNALETQYSLPQTSLEMDQLMHNIPQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQVQKLHEDLENCTCGCKQST