AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74628

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74628.t1 MTR_6g033165 98.429 764 11 1 22 784 56 819 0.0 1543
MS.gene74628.t1 MTR_6g007697 56.818 792 318 11 1 784 1 776 0.0 901
MS.gene74628.t1 MTR_8g099090 57.347 769 316 6 25 784 27 792 0.0 886
MS.gene74628.t1 MTR_3g094090 54.286 805 322 12 12 784 4 794 0.0 849
MS.gene74628.t1 MTR_5g071860 53.411 777 326 6 9 784 13 754 0.0 847
MS.gene74628.t1 MTR_5g034500 54.430 790 336 9 7 784 5 782 0.0 846
MS.gene74628.t1 MTR_5g071630 51.711 760 322 6 25 784 11 725 0.0 783
MS.gene74628.t1 MTR_5g071827 52.367 697 301 4 88 784 1 666 0.0 755
MS.gene74628.t1 MTR_2g438150 50.458 765 349 6 25 784 50 789 0.0 735
MS.gene74628.t1 MTR_2g438150 49.935 765 353 6 25 784 50 789 0.0 731
MS.gene74628.t1 MTR_4g094660 49.084 764 359 4 25 784 50 787 0.0 715
MS.gene74628.t1 MTR_8g107510 46.373 772 392 10 22 781 18 779 0.0 689
MS.gene74628.t1 MTR_8g063840 46.094 768 399 5 19 784 86 840 0.0 682
MS.gene74628.t1 MTR_4g099260 43.038 790 426 7 1 784 44 815 0.0 664
MS.gene74628.t1 MTR_3g094090 52.989 619 253 9 191 784 4 609 0.0 644
MS.gene74628.t1 MTR_7g108480 42.632 760 379 6 25 782 67 771 0.0 635
MS.gene74628.t1 MTR_2g438160 55.044 565 251 1 33 597 58 619 0.0 624
MS.gene74628.t1 MTR_2g008820 42.765 774 416 7 19 784 95 849 0.0 622
MS.gene74628.t1 MTR_8g022130 43.205 780 384 13 6 784 45 766 0.0 620
MS.gene74628.t1 MTR_5g070670 41.720 779 409 7 23 784 99 849 0.0 593
MS.gene74628.t1 MTR_8g088200 39.218 793 435 7 7 784 22 782 0.0 578
MS.gene74628.t1 MTR_8g063900 45.253 632 326 6 1 623 42 662 0.0 576
MS.gene74628.t1 MTR_4g094660 48.237 624 296 3 165 784 1 601 0.0 565
MS.gene74628.t1 MTR_5g034590 40.000 315 139 5 424 738 88 352 3.19e-74 246
MS.gene74628.t1 MTR_5g034590 54.651 86 34 1 87 167 5 90 1.03e-17 86.3
MS.gene74628.t1 MTR_8g022160 48.039 204 92 6 6 208 45 235 1.77e-47 169
MS.gene74628.t1 MTR_1g029310 36.508 126 73 2 175 300 12 130 2.14e-14 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74628.t1 AT3G02050 76.172 789 183 4 1 784 1 789 0.0 1204
MS.gene74628.t1 AT4G23640 57.532 770 311 8 25 784 12 775 0.0 895
MS.gene74628.t1 AT1G70300 55.359 793 334 10 1 784 1 782 0.0 867
MS.gene74628.t1 AT2G40540 54.000 800 327 7 10 784 11 794 0.0 855
MS.gene74628.t1 AT2G40540 54.000 800 327 7 10 784 11 794 0.0 855
MS.gene74628.t1 AT2G40540 54.000 800 327 7 10 784 11 794 0.0 855
MS.gene74628.t1 AT2G40540 54.000 800 327 7 10 784 11 794 0.0 855
MS.gene74628.t1 AT2G40540 54.000 800 327 7 10 784 11 794 0.0 855
MS.gene74628.t1 AT5G14880 56.203 790 317 12 9 784 7 781 0.0 849
MS.gene74628.t1 AT2G30070 58.132 621 260 0 2 622 3 623 0.0 781
MS.gene74628.t1 AT2G30070 61.111 72 28 0 713 784 641 712 1.22e-22 103
MS.gene74628.t1 AT2G35060 48.276 754 361 6 33 784 66 792 0.0 706
MS.gene74628.t1 AT2G35060 48.276 754 361 6 33 784 66 792 0.0 706
MS.gene74628.t1 AT2G35060 48.276 754 361 6 33 784 66 792 0.0 706
MS.gene74628.t1 AT2G35060 48.212 755 361 7 33 784 66 793 0.0 702
MS.gene74628.t1 AT1G60160 45.038 786 407 7 1 784 65 827 0.0 702
MS.gene74628.t1 AT1G31120 48.404 752 368 4 33 784 65 796 0.0 697
MS.gene74628.t1 AT4G19960 47.694 759 381 6 29 784 62 807 0.0 674
MS.gene74628.t1 AT4G19960 46.710 775 381 7 29 784 62 823 0.0 665
MS.gene74628.t1 AT4G19960 46.115 785 381 7 29 784 62 833 0.0 661
MS.gene74628.t1 AT4G13420 42.746 772 407 9 12 782 46 783 0.0 637
MS.gene74628.t1 AT2G30070 56.773 502 217 0 121 622 2 503 0.0 625
MS.gene74628.t1 AT2G30070 61.111 72 28 0 713 784 521 592 9.07e-23 103
MS.gene74628.t1 AT4G33530 40.736 788 423 8 14 784 95 855 0.0 607
MS.gene74628.t1 AT5G09400 41.244 788 413 7 19 784 99 858 0.0 592
MS.gene74628.t1 AT4G19960 46.870 591 301 5 197 784 6 586 2.11e-177 522
MS.gene74628.t1 AT4G33530 40.063 639 342 6 162 784 14 627 7.07e-169 501

Find 185 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGTAACCATTGGATTTC+AGG 0.110674 6.3:-22352968 MS.gene74628:CDS
TTTCAGGACATAACCTTAAT+TGG 0.151323 6.3:-22352952 MS.gene74628:CDS
CTCTTTATTCGCTGCTTTGC+AGG 0.205975 6.3:-22354873 MS.gene74628:CDS
ACCATAAGCATTTCCAATTA+AGG 0.215797 6.3:+22352939 None:intergenic
GTACTTTCTCCAGCTATTTC+AGG 0.226069 6.3:-22354661 MS.gene74628:intron
GTGTTGCAGGACCTGTATTT+TGG 0.244964 6.3:-22353182 MS.gene74628:intron
ATTGGGAAGCAAGTTAAATT+TGG 0.262524 6.3:+22354846 None:intergenic
CACACCTCGAAACACATATT+TGG 0.267140 6.3:-22353039 MS.gene74628:CDS
ACGGGTACAAGGACATTAAA+AGG 0.272084 6.3:-22351688 MS.gene74628:CDS
ATTGAAATGGTTACTAGGTT+TGG 0.295346 6.3:-22351945 MS.gene74628:CDS
ACCTTAATTGGAAATGCTTA+TGG 0.301902 6.3:-22352940 MS.gene74628:intron
TCTGAAGCTTCTTCATTTGA+TGG 0.310126 6.3:-22351581 MS.gene74628:CDS
CAAAGCTTCGGTGTTGTATA+TGG 0.317218 6.3:-22355184 MS.gene74628:CDS
TGGAGTTGATTCGAAGCTTC+TGG 0.317444 6.3:+22351538 None:intergenic
ACAGTTCTGGCATCGGTATC+AGG 0.318446 6.3:-22354107 MS.gene74628:intron
GAAGATGAAGCTATGGATTC+TGG 0.325547 6.3:+22356543 None:intergenic
GGCTGGAGTTGCGTATATAA+TGG 0.328115 6.3:-22351309 MS.gene74628:CDS
TTGAAATGGTTACTAGGTTT+GGG 0.329362 6.3:-22351944 MS.gene74628:CDS
GATGGAAGGATGGCTGTTAT+AGG 0.329614 6.3:-22351563 MS.gene74628:CDS
ATAAGTATCCAGTTAATTTC+TGG 0.335195 6.3:+22353003 None:intergenic
TATACATCCCAGAAATTAAC+TGG 0.342006 6.3:-22353011 MS.gene74628:CDS
ACAACAAAGTTTCATTGAAA+TGG 0.345551 6.3:-22351958 MS.gene74628:CDS
ATCAACTCCAAGCTTGATTT+CGG 0.358230 6.3:-22351525 MS.gene74628:CDS
AGAAATTAACTGGATACTTA+TGG 0.362899 6.3:-22353001 MS.gene74628:CDS
GCTACCTTGGCCGCTATTGT+TGG 0.373549 6.3:-22353144 MS.gene74628:CDS
CTCATCGGCAGCTTGTTGAT+TGG 0.374737 6.3:+22354828 None:intergenic
CGTTTCTGCGAAAGAATTGC+AGG 0.376232 6.3:-22351217 MS.gene74628:CDS
CTCGACGCCTTCTTACTTGC+GGG 0.386663 6.3:+22351411 None:intergenic
TCATCTCATACAAAGTATAA+TGG 0.387176 6.3:-22351645 MS.gene74628:CDS
CATGATGAAGAAACTATCTT+TGG 0.391665 6.3:-22355097 MS.gene74628:CDS
GAAGCCATGTTTGCAGATCT+TGG 0.393510 6.3:-22353518 MS.gene74628:CDS
TCATCGGCAGCTTGTTGATT+GGG 0.394227 6.3:+22354829 None:intergenic
CTTCTTGTTGTCGTACTGTT+TGG 0.394514 6.3:-22354709 MS.gene74628:CDS
ACGGAAACAAAATTCAATAA+TGG 0.397484 6.3:-22354074 MS.gene74628:intron
TTGCACCAATTGTAATCATC+TGG 0.398378 6.3:-22353880 MS.gene74628:CDS
AAAAGGAATATTGTAGCAAT+CGG 0.405929 6.3:+22352133 None:intergenic
TTGACTCTTGCTGTAACCAT+TGG 0.407207 6.3:-22352976 MS.gene74628:CDS
TGATCCAATCCAGGGTTGTT+AGG 0.412649 6.3:+22351374 None:intergenic
TAAGTATCCAGTTAATTTCT+GGG 0.413836 6.3:+22353004 None:intergenic
CTACCTTGGCCGCTATTGTT+GGG 0.413857 6.3:-22353143 MS.gene74628:CDS
GGTCTTTGTTTGCGTAAAAT+CGG 0.416825 6.3:-22351801 MS.gene74628:CDS
TTTGGTGCTTGCATGGTCAT+AGG 0.421597 6.3:-22354691 MS.gene74628:CDS
CACATCAGTCTTATCGAAGT+TGG 0.424667 6.3:-22351167 MS.gene74628:CDS
CTGTTAGCATATCAAAGCTT+CGG 0.428880 6.3:-22355196 MS.gene74628:CDS
AAGTTGATTGCAAGCGGCGC+AGG 0.430238 6.3:+22351447 None:intergenic
CTAGGAATTGTCCGTGTCCC+AGG 0.433982 6.3:-22351914 MS.gene74628:CDS
CCAATCAGAAAACGTTCTTC+AGG 0.435007 6.3:+22351758 None:intergenic
GTTTATAAAAGTACATTTGA+AGG 0.435121 6.3:-22355136 MS.gene74628:CDS
CTTCATCAAGACTAGTACTC+AGG 0.438904 6.3:-22353765 MS.gene74628:CDS
CGCAATGTTGGAGAGCAAAT+AGG 0.439763 6.3:+22353927 None:intergenic
ATCTACTCGGAACTTGCAAC+TGG 0.441741 6.3:-22351881 MS.gene74628:CDS
AAGTAAGAAGGCGTCGAGTA+AGG 0.442966 6.3:-22351406 MS.gene74628:CDS
CAACTCCAGCCTCCTTGGCT+TGG 0.448016 6.3:+22351321 None:intergenic
GTTTCATTGAAATGGTTACT+AGG 0.450379 6.3:-22351950 MS.gene74628:CDS
CCTGCTAGCATGTCTCATAC+TGG 0.452739 6.3:-22353954 MS.gene74628:CDS
TGCTCGGCCGAAATCAAGCT+TGG 0.452895 6.3:+22351518 None:intergenic
ATTGTCCGTGTCCCAGGGAT+TGG 0.453671 6.3:-22351908 MS.gene74628:CDS
GCGGTTCCACTGCCTCCATC+TGG 0.454956 6.3:+22351615 None:intergenic
GTTATGTATGTGTGGCATTA+CGG 0.456184 6.3:-22352010 MS.gene74628:CDS
CGACAATCCAAAAGAACAAA+AGG 0.456707 6.3:+22352116 None:intergenic
GCTGGAGTTGCGTATATAAT+GGG 0.459552 6.3:-22351308 MS.gene74628:CDS
ATGGTTCTCTGCAGTTGTCA+TGG 0.466926 6.3:-22355240 MS.gene74628:intron
CAAAGATAGTTTCTTCATCA+TGG 0.471376 6.3:+22355098 None:intergenic
GGGTTATAGATCTGCTACTA+GGG 0.472351 6.3:+22351468 None:intergenic
CACTAGTCATAATCTTTGTC+TGG 0.474410 6.3:-22352168 MS.gene74628:CDS
GAGGCTCCAGTCTGCGATGA+AGG 0.475101 6.3:+22354781 None:intergenic
ATGAAAACCCGCAAGTAAGA+AGG 0.476574 6.3:-22351418 MS.gene74628:CDS
ATCTTCTCGAAATCCTTCTC+AGG 0.477411 6.3:-22356526 MS.gene74628:intron
CTAGGTTTGGGCCCTAGTCT+AGG 0.478706 6.3:-22351932 MS.gene74628:CDS
ATACGCAACTCCAGCCTCCT+TGG 0.478895 6.3:+22351316 None:intergenic
CTCTGTGTGTTCCGCAATGT+TGG 0.480499 6.3:+22353915 None:intergenic
TTAACAGCATGATCCAATCC+AGG 0.482648 6.3:+22351365 None:intergenic
TCCTGCATTTCACAAGGTGT+TGG 0.483278 6.3:-22351822 MS.gene74628:CDS
TTAATCCAAGCCAAGGAGGC+TGG 0.483772 6.3:-22351326 MS.gene74628:CDS
AAGATCTGCAAACATGGCTT+CGG 0.484207 6.3:+22353520 None:intergenic
ATGCACCTATACATTCGATA+TGG 0.486036 6.3:+22351719 None:intergenic
CACGACCATATCGAATGTAT+AGG 0.487235 6.3:-22351724 MS.gene74628:CDS
TATAGGTGCATTGTTAGATA+CGG 0.488450 6.3:-22351707 MS.gene74628:CDS
TAAAAGTGCACCAGGGAGGA+TGG 0.489671 6.3:-22352066 MS.gene74628:CDS
CGTTCTTCAGGTGAGACATA+TGG 0.492867 6.3:+22351770 None:intergenic
TTCTTCATTTGATGGAAGGA+TGG 0.493112 6.3:-22351573 MS.gene74628:CDS
AGAAGCCAGATGATTACAAT+TGG 0.494086 6.3:+22353875 None:intergenic
ACTGCCTAACAACCCTGGAT+TGG 0.494344 6.3:-22351378 MS.gene74628:CDS
AGGGTTATAGATCTGCTACT+AGG 0.501190 6.3:+22351467 None:intergenic
CTATTGAGCGCCGATGATAA+CGG 0.504444 6.3:-22355013 MS.gene74628:CDS
AAGCTTCTTCATTTGATGGA+AGG 0.505745 6.3:-22351577 MS.gene74628:CDS
AAGGACATTAAAAGGGATGA+TGG 0.507864 6.3:-22351680 MS.gene74628:CDS
GTGTTTGGTAATGCAATACA+TGG 0.510091 6.3:-22353366 MS.gene74628:CDS
GGTATCAGGATTAAAAGTTA+CGG 0.511408 6.3:-22354093 MS.gene74628:CDS
CTGTCCAAATATGTGTTTCG+AGG 0.511421 6.3:+22353035 None:intergenic
TACGGTCCTTCATCGCAGAC+TGG 0.516475 6.3:-22354787 MS.gene74628:CDS
ATCAAGCAGTGTCATGCACT+TGG 0.517666 6.3:-22353087 MS.gene74628:CDS
ATTTCGAGAAGATGAAGCTA+TGG 0.518729 6.3:+22356536 None:intergenic
ACCAACACCTTGTGAAATGC+AGG 0.521396 6.3:+22351821 None:intergenic
CGTACTGTTTGGTGCTTGCA+TGG 0.524544 6.3:-22354698 MS.gene74628:CDS
TGTCATGGATTAACTTGTCT+AGG 0.526123 6.3:-22355225 MS.gene74628:CDS
GGCGTTCCTAAAAGTGCACC+AGG 0.530505 6.3:-22352074 MS.gene74628:CDS
AAAGGAATATTGTAGCAATC+GGG 0.530724 6.3:+22352134 None:intergenic
CGGGTACAAGGACATTAAAA+GGG 0.532081 6.3:-22351687 MS.gene74628:CDS
GATATCAACATCTTCTTGCT+CGG 0.532591 6.3:+22351502 None:intergenic
TTTAGATTTAATCCAAGCCA+AGG 0.535244 6.3:-22351333 MS.gene74628:CDS
CATTGTTAGATACGGGTACA+AGG 0.540496 6.3:-22351699 MS.gene74628:CDS
ACTCAGGGTTGGATTTCTCT+CGG 0.541690 6.3:-22353749 MS.gene74628:CDS
GAGCTGTCGTCGTACAAATA+CGG 0.542689 6.3:-22354805 MS.gene74628:CDS
GTTTATCCAGATGGAGGCAG+TGG 0.542753 6.3:-22351621 MS.gene74628:CDS
CTAGCATGTCTCATACTGGT+TGG 0.543181 6.3:-22353950 MS.gene74628:CDS
ACTCCCAACAATAGCGGCCA+AGG 0.543271 6.3:+22353140 None:intergenic
TTACCCTACAGTTCTGGCAT+CGG 0.546800 6.3:-22354114 MS.gene74628:intron
ACTACCTTACCTGAAATAGC+TGG 0.548887 6.3:+22354652 None:intergenic
TGCATGACACTGCTTGATGA+TGG 0.549256 6.3:+22353092 None:intergenic
ACACGGACAATTCCTAGACT+AGG 0.553888 6.3:+22351920 None:intergenic
TCAAGACTAGTACTCAGGGT+TGG 0.554454 6.3:-22353760 MS.gene74628:CDS
TCTTGATTGTTATGTATGTG+TGG 0.554494 6.3:-22352018 MS.gene74628:CDS
GTTCATAACCACATTTCTGA+TGG 0.556704 6.3:-22352191 MS.gene74628:CDS
CATAACAATCAAGAAGAAGA+AGG 0.558991 6.3:+22352027 None:intergenic
ATGACCAAGATCTGCAAACA+TGG 0.559044 6.3:+22353514 None:intergenic
CAAGAGGAACCCATCCTCCC+TGG 0.559228 6.3:+22352056 None:intergenic
TATAATGGAGTTTATCCAGA+TGG 0.560256 6.3:-22351630 MS.gene74628:CDS
GGAATGTTGAGAGCCACAGC+TGG 0.564106 6.3:+22351191 None:intergenic
AAAAGTGCACCAGGGAGGAT+GGG 0.564191 6.3:-22352065 MS.gene74628:CDS
CGTCAAAAGTTGATTGCAAG+CGG 0.565019 6.3:+22351441 None:intergenic
AATACCTTCACCGTTATCAT+CGG 0.565220 6.3:+22355003 None:intergenic
AGGAAGGTTTGTTACGAAGT+GGG 0.566294 6.3:+22351841 None:intergenic
ACTCGACGCCTTCTTACTTG+CGG 0.568178 6.3:+22351410 None:intergenic
CAGGAAGGTTTGTTACGAAG+TGG 0.569332 6.3:+22351840 None:intergenic
TTTCAACTGCCTAACAACCC+TGG 0.571708 6.3:-22351383 MS.gene74628:CDS
CCAGTATGAGACATGCTAGC+AGG 0.572488 6.3:+22353954 None:intergenic
GGATCTATAATACGATACAC+TGG 0.573433 6.3:-22353835 MS.gene74628:CDS
AGAACTTGATGATATAATGT+GGG 0.574528 6.3:+22353786 None:intergenic
AGGGTTGGATTTCTCTCGGA+GGG 0.577288 6.3:-22353745 MS.gene74628:CDS
GGTTATGTCCTGAAATCCAA+TGG 0.581083 6.3:+22352960 None:intergenic
GTACGACGACAGCTCCTCAT+CGG 0.584229 6.3:+22354813 None:intergenic
AAGAAGAAGGACAAGACAAG+AGG 0.585159 6.3:+22352040 None:intergenic
TCAGGTGAGACATATGGTAC+AGG 0.585971 6.3:+22351776 None:intergenic
TTCATCAAGACTAGTACTCA+GGG 0.586587 6.3:-22353764 MS.gene74628:CDS
CACGGACAATTCCTAGACTA+GGG 0.586686 6.3:+22351921 None:intergenic
GGTGTGTACGACTTTGACGC+GGG 0.588179 6.3:+22353056 None:intergenic
GGGATACTTCTCTGCATCAC+CGG 0.588408 6.3:-22353725 MS.gene74628:intron
GCTTGCATGGTCATAGGTGA+TGG 0.589102 6.3:-22354685 MS.gene74628:CDS
ATAGGTGCATTGTTAGATAC+GGG 0.589766 6.3:-22351706 MS.gene74628:CDS
TAGGAATTGTCCGTGTCCCA+GGG 0.591674 6.3:-22351913 MS.gene74628:CDS
AAGAACTTGATGATATAATG+TGG 0.595238 6.3:+22353785 None:intergenic
CGGGTATATAACAAAAGCAA+AGG 0.595997 6.3:+22353388 None:intergenic
AGTTGATTGCAAGCGGCGCA+GGG 0.596111 6.3:+22351448 None:intergenic
GATATGGTCGTGGACAAGCT+CGG 0.598042 6.3:+22351735 None:intergenic
CAATCAACAAGCTGCCGATG+AGG 0.599619 6.3:-22354827 MS.gene74628:CDS
AGGGTCGGTTGTACCTGAGA+AGG 0.600575 6.3:+22356513 None:intergenic
AGTAGATGAGTCCAATCCCT+GGG 0.601618 6.3:+22351897 None:intergenic
ATGTATTGCATTACCAAACA+CGG 0.601781 6.3:+22353368 None:intergenic
GACACTCGTATGTGAAGGCA+AGG 0.602824 6.3:-22351286 MS.gene74628:CDS
AAACGTCTTCAGCGGAGACG+AGG 0.602875 6.3:+22354762 None:intergenic
GAGTAGATGAGTCCAATCCC+TGG 0.603429 6.3:+22351896 None:intergenic
ATGAATACATATTTAAGCAA+CGG 0.604438 6.3:+22355037 None:intergenic
GTTTCTGCGAAAGAATTGCA+GGG 0.607197 6.3:-22351216 MS.gene74628:CDS
AACTATTATGAACAGAGTCG+AGG 0.607255 6.3:+22353318 None:intergenic
ACGAAGTGGGTGAATATCGA+TGG 0.607427 6.3:+22351854 None:intergenic
CTATACATTCGATATGGTCG+TGG 0.608299 6.3:+22351725 None:intergenic
GCTTCAGAACTCGAGAATTG+CGG 0.608404 6.3:+22351596 None:intergenic
TAACAGCATGATCCAATCCA+GGG 0.608772 6.3:+22351366 None:intergenic
TGTGGCATTACGGTATTCGT+AGG 0.609257 6.3:-22352000 MS.gene74628:CDS
GAATTGCAGGGGTCCAGCTG+TGG 0.613283 6.3:-22351204 MS.gene74628:CDS
GACTAGTGCCATCAGAAATG+TGG 0.617430 6.3:+22352183 None:intergenic
TGCAGGACTTGCTTGTATGA+CGG 0.622018 6.3:-22352218 MS.gene74628:intron
AGCGCCGATGATAACGGTGA+AGG 0.624946 6.3:-22355007 MS.gene74628:intron
AATGGGACACTCGTATGTGA+AGG 0.630197 6.3:-22351291 MS.gene74628:CDS
TGAGTCCAATCCCTGGGACA+CGG 0.634316 6.3:+22351903 None:intergenic
AGATAGTTTCTTCATCATGG+TGG 0.637899 6.3:+22355101 None:intergenic
AGGTGTGTACGACTTTGACG+CGG 0.639117 6.3:+22353055 None:intergenic
AAACCTTCCTGCATTTCACA+AGG 0.643965 6.3:-22351828 MS.gene74628:CDS
AATGGAGTTTATCCAGATGG+AGG 0.651775 6.3:-22351627 MS.gene74628:CDS
AGCTTGACTCCCAACAATAG+CGG 0.652223 6.3:+22353134 None:intergenic
CGAAGGCGTGTATCTATCAG+CGG 0.653373 6.3:-22352095 MS.gene74628:CDS
TGTATTGCATTACCAAACAC+GGG 0.653373 6.3:+22353369 None:intergenic
AGGGATTGGACTCATCTACT+CGG 0.657568 6.3:-22351894 MS.gene74628:CDS
CTATTTGCTCTCCAACATTG+CGG 0.663991 6.3:-22353926 MS.gene74628:CDS
TTTCTGCGAAAGAATTGCAG+GGG 0.665372 6.3:-22351215 MS.gene74628:CDS
ACACCTTGTGAAATGCAGGA+AGG 0.668467 6.3:+22351825 None:intergenic
CAGGGTTGGATTTCTCTCGG+AGG 0.669872 6.3:-22353746 MS.gene74628:CDS
TTCCTAAAAGTGCACCAGGG+AGG 0.703180 6.3:-22352070 MS.gene74628:CDS
TGTTTGGTAATGCAATACAT+GGG 0.708247 6.3:-22353365 MS.gene74628:CDS
GAACTTGATGATATAATGTG+GGG 0.708764 6.3:+22353787 None:intergenic
AGATTTAATCCAAGCCAAGG+AGG 0.711722 6.3:-22351330 MS.gene74628:CDS
ACTTCGATAAGACTGATGTG+AGG 0.732857 6.3:+22351170 None:intergenic
GTGTGTACGACTTTGACGCG+GGG 0.733832 6.3:+22353057 None:intergenic
GCGTTCCTAAAAGTGCACCA+GGG 0.755406 6.3:-22352073 MS.gene74628:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATGAATTATATGATT+TGG - chr6.3:22354925-22354944 MS.gene74628:intron 10.0%
!!! AACTATAATTTAAGTTTTTT+CGG + chr6.3:22355250-22355269 None:intergenic 10.0%
!! AATTGCATATAAATAAGTTT+GGG + chr6.3:22354901-22354920 None:intergenic 15.0%
!! ACTTGAAACATAAATTTAAA+AGG + chr6.3:22352744-22352763 None:intergenic 15.0%
!! ATTTAACGAATAATAATACT+TGG + chr6.3:22352414-22352433 None:intergenic 15.0%
!! TAATTGCATATAAATAAGTT+TGG + chr6.3:22354902-22354921 None:intergenic 15.0%
!!! AAAACAAATTGATTTCATTA+AGG + chr6.3:22354473-22354492 None:intergenic 15.0%
!!! AAATGTATCGATTTTTTTTA+TGG - chr6.3:22352438-22352457 MS.gene74628:intron 15.0%
!!! GCTTAAATTTAAAGTTATAA+GGG + chr6.3:22354072-22354091 None:intergenic 15.0%
!!! TTTTAAATTTATGTTTCAAG+TGG - chr6.3:22352743-22352762 MS.gene74628:intron 15.0%
!! AATAAAATAAACATCTGCAA+TGG - chr6.3:22352165-22352184 MS.gene74628:CDS 20.0%
!! ACCAACTTATCAAAAAAAAA+AGG + chr6.3:22351328-22351347 None:intergenic 20.0%
!! ATGAATACATATTTAAGCAA+CGG + chr6.3:22352663-22352682 None:intergenic 20.0%
!! CAAAACAATATGATAAACAT+TGG + chr6.3:22355309-22355328 None:intergenic 20.0%
!! TCTTATCATATAAGTTCTTA+TGG - chr6.3:22353143-22353162 MS.gene74628:CDS 20.0%
!!! CGCTTAAATTTAAAGTTATA+AGG + chr6.3:22354073-22354092 None:intergenic 20.0%
!!! CTACTTTGAATAATTTTCTA+TGG - chr6.3:22352366-22352385 MS.gene74628:intron 20.0%
!!! GTTTATAAAAGTACATTTGA+AGG - chr6.3:22352561-22352580 MS.gene74628:intron 20.0%
!!! TCCTTTTTTTTTTGATAAGT+TGG - chr6.3:22351324-22351343 MS.gene74628:CDS 20.0%
!!! TTCTATCGATTTTTATTCTT+GGG - chr6.3:22353841-22353860 MS.gene74628:CDS 20.0%
!!! TTCTTTAGTGTATTTTTGAT+GGG - chr6.3:22351652-22351671 MS.gene74628:CDS 20.0%
!!! TTTTAAAAACTAAAATACCG+AGG + chr6.3:22351814-22351833 None:intergenic 20.0%
!!! TTTTGATTCAAATCTTCTAT+TGG - chr6.3:22351364-22351383 MS.gene74628:CDS 20.0%
! AAAAGGAATATTGTAGCAAT+CGG + chr6.3:22355567-22355586 None:intergenic 25.0%
! AATACTCGGAAAACTTATTA+CGG + chr6.3:22355455-22355474 None:intergenic 25.0%
! ACAACAAAGTTTCATTGAAA+TGG - chr6.3:22355739-22355758 MS.gene74628:intron 25.0%
! ACGGAAACAAAATTCAATAA+TGG - chr6.3:22353623-22353642 MS.gene74628:intron 25.0%
! AGAAATTAACTGGATACTTA+TGG - chr6.3:22354696-22354715 MS.gene74628:CDS 25.0%
! ATAAGTATCCAGTTAATTTC+TGG + chr6.3:22354697-22354716 None:intergenic 25.0%
! ATCTACTAAAAACTGTTGTA+TGG + chr6.3:22353494-22353513 None:intergenic 25.0%
! GAAAATAACTTACAGCTTAA+TGG + chr6.3:22353207-22353226 None:intergenic 25.0%
! GAAACAACGTGAAATTTATT+AGG + chr6.3:22353710-22353729 None:intergenic 25.0%
! TAAGCTGAAAATAAACTTAC+AGG - chr6.3:22353254-22353273 MS.gene74628:intron 25.0%
! TAAGTATCCAGTTAATTTCT+GGG + chr6.3:22354696-22354715 None:intergenic 25.0%
! TATCTCTAGCAAATGAAAAT+TGG + chr6.3:22353653-22353672 None:intergenic 25.0%
! TCATCTCATACAAAGTATAA+TGG - chr6.3:22356052-22356071 MS.gene74628:intron 25.0%
! TGAGAATTTGAACAAGTTAA+AGG + chr6.3:22353534-22353553 None:intergenic 25.0%
! TGATAATTGATACAAGAAAG+TGG - chr6.3:22351538-22351557 MS.gene74628:CDS 25.0%
!! AAATGAGTTACTAAGTTGAA+TGG - chr6.3:22354126-22354145 MS.gene74628:intron 25.0%
!! AAGAACTTGATGATATAATG+TGG + chr6.3:22353915-22353934 None:intergenic 25.0%
!! AGAACTTGATGATATAATGT+GGG + chr6.3:22353914-22353933 None:intergenic 25.0%
!! ATTTTTCGTAACCATGTTAT+TGG + chr6.3:22352298-22352317 None:intergenic 25.0%
!! CAATATTCCTTTTGTTCTTT+TGG - chr6.3:22355574-22355593 MS.gene74628:intron 25.0%
!! GTACTTTTATAAACATAGAG+CGG + chr6.3:22352555-22352574 None:intergenic 25.0%
!! TAATAAGTTTTCCGAGTATT+TGG - chr6.3:22355455-22355474 MS.gene74628:intron 25.0%
!! TTTGAGATTGAGATAAGAAA+GGG + chr6.3:22351206-22351225 None:intergenic 25.0%
!!! AGGGTAAATTATTTCTGAAA+AGG + chr6.3:22354053-22354072 None:intergenic 25.0%
!!! ATTTAAGTTTTTTCGGTAAG+AGG + chr6.3:22355243-22355262 None:intergenic 25.0%
!!! ATTTCATACTTTGAGATTTG+AGG - chr6.3:22351426-22351445 MS.gene74628:CDS 25.0%
!!! CTTCTATCGATTTTTATTCT+TGG - chr6.3:22353840-22353859 MS.gene74628:CDS 25.0%
!!! CTTCTTTAGTGTATTTTTGA+TGG - chr6.3:22351651-22351670 MS.gene74628:CDS 25.0%
!!! GTTATTTTCATAAGCTATCT+TGG - chr6.3:22353218-22353237 MS.gene74628:intron 25.0%
!!! TATGCTTGATAGTGAATTAT+TGG + chr6.3:22351456-22351475 None:intergenic 25.0%
!!! TTTAAGTTTTTTCGGTAAGA+GGG + chr6.3:22355242-22355261 None:intergenic 25.0%
!!! TTTCATACTTTGAGATTTGA+GGG - chr6.3:22351427-22351446 MS.gene74628:CDS 25.0%
AAAAAGCTTGTGATCGATAT+GGG - chr6.3:22356452-22356471 MS.gene74628:intron 30.0%
AAAGGAATATTGTAGCAATC+GGG + chr6.3:22355566-22355585 None:intergenic 30.0%
AAGCTTATGGAAACATCTAA+TGG + chr6.3:22353284-22353303 None:intergenic 30.0%
AAGGTAGCAATAACAAAAAC+AGG + chr6.3:22354541-22354560 None:intergenic 30.0%
AATAAGAAAATCCAGAGAGT+CGG - chr6.3:22353073-22353092 MS.gene74628:CDS 30.0%
AATACTTCACACCAATAACA+TGG - chr6.3:22352284-22352303 MS.gene74628:intron 30.0%
ACCATAAGCATTTCCAATTA+AGG + chr6.3:22354761-22354780 None:intergenic 30.0%
ACCTTAATTGGAAATGCTTA+TGG - chr6.3:22354757-22354776 MS.gene74628:CDS 30.0%
AGAACTTAATTAAGCACTTC+TGG + chr6.3:22353112-22353131 None:intergenic 30.0%
AGACAGTTTATGAAAGCTTA+TGG + chr6.3:22353297-22353316 None:intergenic 30.0%
ATCATGATGCAATTATTGTC+AGG - chr6.3:22352790-22352809 MS.gene74628:intron 30.0%
ATGTATTGCATTACCAAACA+CGG + chr6.3:22354332-22354351 None:intergenic 30.0%
ATTGAAATGGTTACTAGGTT+TGG - chr6.3:22355752-22355771 MS.gene74628:intron 30.0%
ATTGGGAAGCAAGTTAAATT+TGG + chr6.3:22352854-22352873 None:intergenic 30.0%
CAAAGATAGTTTCTTCATCA+TGG + chr6.3:22352602-22352621 None:intergenic 30.0%
CATAACAATCAAGAAGAAGA+AGG + chr6.3:22355673-22355692 None:intergenic 30.0%
CATATAAATAAGTTTGGGCT+AGG + chr6.3:22354896-22354915 None:intergenic 30.0%
CATGATGAAGAAACTATCTT+TGG - chr6.3:22352600-22352619 MS.gene74628:intron 30.0%
CTTGTTCAAATTCTCAGTTA+CGG - chr6.3:22353538-22353557 MS.gene74628:intron 30.0%
GAACTTAATTAAGCACTTCT+GGG + chr6.3:22353111-22353130 None:intergenic 30.0%
GGTATCAGGATTAAAAGTTA+CGG - chr6.3:22353604-22353623 MS.gene74628:intron 30.0%
GTTGTATGGAAATTTGAACA+CGG + chr6.3:22353480-22353499 None:intergenic 30.0%
GTTTCATTGAAATGGTTACT+AGG - chr6.3:22355747-22355766 MS.gene74628:intron 30.0%
TAAACATCTGCAATGGAATA+TGG - chr6.3:22352172-22352191 MS.gene74628:CDS 30.0%
TATACATCCCAGAAATTAAC+TGG - chr6.3:22354686-22354705 MS.gene74628:CDS 30.0%
TATAGGTGCATTGTTAGATA+CGG - chr6.3:22355990-22356009 MS.gene74628:intron 30.0%
TCTTGATTGTTATGTATGTG+TGG - chr6.3:22355679-22355698 MS.gene74628:intron 30.0%
TTGAAATGGTTACTAGGTTT+GGG - chr6.3:22355753-22355772 MS.gene74628:intron 30.0%
TTTAGATTTAATCCAAGCCA+AGG - chr6.3:22356364-22356383 MS.gene74628:intron 30.0%
TTTCAGGACATAACCTTAAT+TGG - chr6.3:22354745-22354764 MS.gene74628:CDS 30.0%
! AAAGTACCTAGCTTGAAATA+TGG + chr6.3:22352135-22352154 None:intergenic 30.0%
! AGTTACACTTTTCAGCTTAT+AGG + chr6.3:22355149-22355168 None:intergenic 30.0%
! ATAAATTTCACGTTGTTTCC+AGG - chr6.3:22353711-22353730 MS.gene74628:intron 30.0%
! ATTTTACTGCTTCGTCAATA+AGG - chr6.3:22354204-22354223 MS.gene74628:intron 30.0%
! GAACTTGATGATATAATGTG+GGG + chr6.3:22353913-22353932 None:intergenic 30.0%
! GAGATAGCAAAGACTATTTT+TGG + chr6.3:22353891-22353910 None:intergenic 30.0%
! GTTTGAGATTGAGATAAGAA+AGG + chr6.3:22351207-22351226 None:intergenic 30.0%
! TATAATGGAGTTTATCCAGA+TGG - chr6.3:22356067-22356086 MS.gene74628:intron 30.0%
! TTCTTTTCATAATCAGTAGC+AGG + chr6.3:22355332-22355351 None:intergenic 30.0%
! TTTTACTGCTTCGTCAATAA+GGG - chr6.3:22354205-22354224 MS.gene74628:intron 30.0%
! TTTTAGACAAAAAAGCTGCT+TGG + chr6.3:22354358-22354377 None:intergenic 30.0%
!! TGTTTGGTAATGCAATACAT+GGG - chr6.3:22354332-22354351 MS.gene74628:intron 30.0%
!! TTCATACTTTGAGATTTGAG+GGG - chr6.3:22351428-22351447 MS.gene74628:CDS 30.0%
!! TTTTGTTATATACCCGTGTT+TGG - chr6.3:22354316-22354335 MS.gene74628:intron 30.0%
!!! ATGTAATGCTTGTGCTATTT+TGG - chr6.3:22355278-22355297 MS.gene74628:intron 30.0%
!!! GTGTTTTTTCGTTGATTTTC+TGG - chr6.3:22352622-22352641 MS.gene74628:intron 30.0%
!!! TGTTTTTGTTATTGCTACCT+TGG - chr6.3:22354540-22354559 MS.gene74628:intron 30.0%
AACTATTATGAACAGAGTCG+AGG + chr6.3:22354382-22354401 None:intergenic 35.0%
AAGCTTCTTCATTTGATGGA+AGG - chr6.3:22356120-22356139 MS.gene74628:intron 35.0%
AAGGACATTAAAAGGGATGA+TGG - chr6.3:22356017-22356036 MS.gene74628:intron 35.0%
AATACCTTCACCGTTATCAT+CGG + chr6.3:22352697-22352716 None:intergenic 35.0%
ACAAAAACAGGCCAAAATAC+AGG + chr6.3:22354529-22354548 None:intergenic 35.0%
ACTAACGCAATTTGAATTCG+AGG - chr6.3:22352220-22352239 MS.gene74628:intron 35.0%
ACTGTCAAATCTCAATCCAA+CGG + chr6.3:22351780-22351799 None:intergenic 35.0%
AGAAGCCAGATGATTACAAT+TGG + chr6.3:22353825-22353844 None:intergenic 35.0%
AGATAGTTTCTTCATCATGG+TGG + chr6.3:22352599-22352618 None:intergenic 35.0%
AGATTGAGATAAGAAAGGGT+CGG + chr6.3:22351202-22351221 None:intergenic 35.0%
AGTTTAGTTATTGGCAAAGC+CGG - chr6.3:22352259-22352278 MS.gene74628:intron 35.0%
ATAGGTGCATTGTTAGATAC+GGG - chr6.3:22355991-22356010 MS.gene74628:intron 35.0%
ATCAACTCCAAGCTTGATTT+CGG - chr6.3:22356172-22356191 MS.gene74628:intron 35.0%
ATGATGCAATTATTGTCAGG+TGG - chr6.3:22352793-22352812 MS.gene74628:intron 35.0%
ATGCACCTATACATTCGATA+TGG + chr6.3:22355981-22356000 None:intergenic 35.0%
ATTTCGAGAAGATGAAGCTA+TGG + chr6.3:22351164-22351183 None:intergenic 35.0%
CACGTAAGATAACTACTTGT+AGG + chr6.3:22354013-22354032 None:intergenic 35.0%
CACTAGTCATAATCTTTGTC+TGG - chr6.3:22355529-22355548 MS.gene74628:intron 35.0%
CATTTCAGTGTAGACTTCTT+TGG - chr6.3:22352322-22352341 MS.gene74628:intron 35.0%
CCCTAATGAAGTTTAGTCAT+CGG + chr6.3:22352019-22352038 None:intergenic 35.0%
CCGATGACTAAACTTCATTA+GGG - chr6.3:22352016-22352035 MS.gene74628:CDS 35.0%
CGACAATCCAAAAGAACAAA+AGG + chr6.3:22355584-22355603 None:intergenic 35.0%
CGGGTATATAACAAAAGCAA+AGG + chr6.3:22354312-22354331 None:intergenic 35.0%
CTAACGCAATTTGAATTCGA+GGG - chr6.3:22352221-22352240 MS.gene74628:intron 35.0%
CTACAAGTAGTTATCTTACG+TGG - chr6.3:22354011-22354030 MS.gene74628:intron 35.0%
CTGTTAGCATATCAAAGCTT+CGG - chr6.3:22352501-22352520 MS.gene74628:intron 35.0%
GAAAAAGCTTGTGATCGATA+TGG - chr6.3:22356451-22356470 MS.gene74628:intron 35.0%
GATATCAACATCTTCTTGCT+CGG + chr6.3:22356198-22356217 None:intergenic 35.0%
GCGTTGAAACCAAAACTATA+GGG - chr6.3:22354815-22354834 MS.gene74628:CDS 35.0%
GGATCTATAATACGATACAC+TGG - chr6.3:22353862-22353881 MS.gene74628:CDS 35.0%
GTTATGTATGTGTGGCATTA+CGG - chr6.3:22355687-22355706 MS.gene74628:intron 35.0%
GTTCATAACCACATTTCTGA+TGG - chr6.3:22355506-22355525 MS.gene74628:intron 35.0%
TAACGCAATTTGAATTCGAG+GGG - chr6.3:22352222-22352241 MS.gene74628:intron 35.0%
TAGACTTCTTTGGATTTCCA+CGG - chr6.3:22352332-22352351 MS.gene74628:intron 35.0%
TATCTGACTATGTGAATGCA+AGG - chr6.3:22351890-22351909 MS.gene74628:CDS 35.0%
TATGCAAAGTTCAACTCGTT+TGG + chr6.3:22354988-22355007 None:intergenic 35.0%
TCCAAGAATTGCACTTCTAA+GGG + chr6.3:22353370-22353389 None:intergenic 35.0%
TCGAATTCAAATTGCGTTAG+TGG + chr6.3:22352221-22352240 None:intergenic 35.0%
TGCATAGGCAAAATACAGAT+TGG + chr6.3:22355416-22355435 None:intergenic 35.0%
TGCGAGAAATCTGAATTTGA+GGG - chr6.3:22351922-22351941 MS.gene74628:CDS 35.0%
TGTATTGCATTACCAAACAC+GGG + chr6.3:22354331-22354350 None:intergenic 35.0%
TTCACATAGTCAGATATCAC+TGG + chr6.3:22351886-22351905 None:intergenic 35.0%
TTCATCAAGACTAGTACTCA+GGG - chr6.3:22353933-22353952 MS.gene74628:CDS 35.0%
TTCCAAGAATTGCACTTCTA+AGG + chr6.3:22353371-22353390 None:intergenic 35.0%
TTCTTCATTTGATGGAAGGA+TGG - chr6.3:22356124-22356143 MS.gene74628:intron 35.0%
TTGCACCAATTGTAATCATC+TGG - chr6.3:22353817-22353836 MS.gene74628:CDS 35.0%
TTGCGAGAAATCTGAATTTG+AGG - chr6.3:22351921-22351940 MS.gene74628:CDS 35.0%
! ACACTTTTCAGCTTATAGGT+TGG + chr6.3:22355145-22355164 None:intergenic 35.0%
! ACTTTTCAGCTTATAGGTTG+GGG + chr6.3:22355143-22355162 None:intergenic 35.0%
! AGCGTTGAAACCAAAACTAT+AGG - chr6.3:22354814-22354833 MS.gene74628:CDS 35.0%
! AGTTTTTACGACTCAATACC+TGG - chr6.3:22354398-22354417 MS.gene74628:intron 35.0%
! ATGCAATCTCCCTATAGTTT+TGG + chr6.3:22354827-22354846 None:intergenic 35.0%
! CACTTTTCAGCTTATAGGTT+GGG + chr6.3:22355144-22355163 None:intergenic 35.0%
! GAGCTCAAGTTTGACTTATT+TGG - chr6.3:22355034-22355053 MS.gene74628:CDS 35.0%
! GGTCTTTGTTTGCGTAAAAT+CGG - chr6.3:22355896-22355915 MS.gene74628:intron 35.0%
! TATTGGTGTGAAGTATTCAC+CGG + chr6.3:22352281-22352300 None:intergenic 35.0%
! TCTGAAGCTTCTTCATTTGA+TGG - chr6.3:22356116-22356135 MS.gene74628:intron 35.0%
! TTGTTCTTTTGGATTGTCGA+AGG - chr6.3:22355585-22355604 MS.gene74628:intron 35.0%
! TTTGGATTTCCACGGTTTTT+CGG - chr6.3:22352340-22352359 MS.gene74628:intron 35.0%
!! AAACTGCTTTCAAGTTGGTT+CGG - chr6.3:22355099-22355118 MS.gene74628:CDS 35.0%
!! GTGTTTGGTAATGCAATACA+TGG - chr6.3:22354331-22354350 MS.gene74628:intron 35.0%
!! TGTCATGGATTAACTTGTCT+AGG - chr6.3:22352472-22352491 MS.gene74628:intron 35.0%
AAACCTTCCTGCATTTCACA+AGG - chr6.3:22355869-22355888 MS.gene74628:intron 40.0%
AAGAAGAAGGACAAGACAAG+AGG + chr6.3:22355660-22355679 None:intergenic 40.0%
AAGATCTGCAAACATGGCTT+CGG + chr6.3:22354180-22354199 None:intergenic 40.0%
AAGCAGTTTGAGTCTCGATT+CGG + chr6.3:22355088-22355107 None:intergenic 40.0%
AAGTAGAAACCGAAAAACCG+TGG + chr6.3:22352352-22352371 None:intergenic 40.0%
AAGTCCTGCAACCAAATACT+CGG + chr6.3:22355469-22355488 None:intergenic 40.0%
AATGGAGTTTATCCAGATGG+AGG - chr6.3:22356070-22356089 MS.gene74628:intron 40.0%
ACAATGACTAATCTCCGATG+AGG + chr6.3:22351978-22351997 None:intergenic 40.0%
ACGGGTACAAGGACATTAAA+AGG - chr6.3:22356009-22356028 MS.gene74628:intron 40.0%
ACTACCTTACCTGAAATAGC+TGG + chr6.3:22353048-22353067 None:intergenic 40.0%
ACTGGTCGTTGTATTGAGAT+CGG + chr6.3:22351868-22351887 None:intergenic 40.0%
ACTTCGATAAGACTGATGTG+AGG + chr6.3:22356530-22356549 None:intergenic 40.0%
AGATTTAATCCAAGCCAAGG+AGG - chr6.3:22356367-22356386 MS.gene74628:intron 40.0%
AGGGTTATAGATCTGCTACT+AGG + chr6.3:22356233-22356252 None:intergenic 40.0%
AGTGAAACGTTTCCATCAAG+AGG + chr6.3:22355182-22355201 None:intergenic 40.0%
AGTTTAGTCATCGGCAAAGT+TGG + chr6.3:22352010-22352029 None:intergenic 40.0%
ATCTTCTCGAAATCCTTCTC+AGG - chr6.3:22351171-22351190 MS.gene74628:CDS 40.0%
ATGAAAACCCGCAAGTAAGA+AGG - chr6.3:22356279-22356298 MS.gene74628:intron 40.0%
ATGACCAAGATCTGCAAACA+TGG + chr6.3:22354186-22354205 None:intergenic 40.0%
CACACCTCGAAACACATATT+TGG - chr6.3:22354658-22354677 MS.gene74628:intron 40.0%
CACGACCATATCGAATGTAT+AGG - chr6.3:22355973-22355992 MS.gene74628:intron 40.0%
CATAATATTCCGCATACACG+CGG - chr6.3:22351739-22351758 MS.gene74628:CDS 40.0%
CATTGTTAGATACGGGTACA+AGG - chr6.3:22355998-22356017 MS.gene74628:intron 40.0%
CCAATAACTAAACTCCGTCA+CGG + chr6.3:22352253-22352272 None:intergenic 40.0%
CCAATCAGAAAACGTTCTTC+AGG + chr6.3:22355942-22355961 None:intergenic 40.0%
CGGGTACAAGGACATTAAAA+GGG - chr6.3:22356010-22356029 MS.gene74628:intron 40.0%
CGGTAATTAACCGTTACACT+AGG + chr6.3:22355068-22355087 None:intergenic 40.0%
CTAATCTCCGATGAGGAATT+TGG + chr6.3:22351971-22351990 None:intergenic 40.0%
CTATACATTCGATATGGTCG+TGG + chr6.3:22355975-22355994 None:intergenic 40.0%
CTATTTGCTCTCCAACATTG+CGG - chr6.3:22353771-22353790 MS.gene74628:CDS 40.0%
CTGTCCAAATATGTGTTTCG+AGG + chr6.3:22354665-22354684 None:intergenic 40.0%
CTTCATCAAGACTAGTACTC+AGG - chr6.3:22353932-22353951 MS.gene74628:CDS 40.0%
CTTTGTGGATGGAAAAACTG+TGG - chr6.3:22351681-22351700 MS.gene74628:CDS 40.0%
GAAAGTCGGAATTACTAACC+AGG + chr6.3:22354419-22354438 None:intergenic 40.0%
GAAGATGAAGCTATGGATTC+TGG + chr6.3:22351157-22351176 None:intergenic 40.0%
GACAGTCATGATTTCAACCT+CGG - chr6.3:22351794-22351813 MS.gene74628:CDS 40.0%
GCCGATGACTAAACTTCATT+AGG - chr6.3:22352015-22352034 MS.gene74628:CDS 40.0%
GCGAGAAATCTGAATTTGAG+GGG - chr6.3:22351923-22351942 MS.gene74628:CDS 40.0%
GCTGGAGTTGCGTATATAAT+GGG - chr6.3:22356389-22356408 MS.gene74628:intron 40.0%
GGGTTATAGATCTGCTACTA+GGG + chr6.3:22356232-22356251 None:intergenic 40.0%
GGTTATGTCCTGAAATCCAA+TGG + chr6.3:22354740-22354759 None:intergenic 40.0%
GTGAAACGTTTCCATCAAGA+GGG + chr6.3:22355181-22355200 None:intergenic 40.0%
GTTTCTGCGAAAGAATTGCA+GGG - chr6.3:22356481-22356500 MS.gene74628:intron 40.0%
TAACAGCATGATCCAATCCA+GGG + chr6.3:22356334-22356353 None:intergenic 40.0%
TGAAGGCAAACCCAATTCAA+GGG + chr6.3:22352048-22352067 None:intergenic 40.0%
TGCTGTAACCATTGGATTTC+AGG - chr6.3:22354729-22354748 MS.gene74628:CDS 40.0%
TGGATGGAAAAACTGTGGTT+GGG - chr6.3:22351686-22351705 MS.gene74628:CDS 40.0%
TTAACAGCATGATCCAATCC+AGG + chr6.3:22356335-22356354 None:intergenic 40.0%
TTCTCCAAAAACGTCTTCAG+CGG + chr6.3:22352946-22352965 None:intergenic 40.0%
TTCTTCTTACCCTACAGTTC+TGG - chr6.3:22353577-22353596 MS.gene74628:intron 40.0%
TTTCTGCGAAAGAATTGCAG+GGG - chr6.3:22356482-22356501 MS.gene74628:intron 40.0%
! AATGTTTTGCCTTGTGTTGC+AGG - chr6.3:22354502-22354521 MS.gene74628:intron 40.0%
! CACATCAGTCTTATCGAAGT+TGG - chr6.3:22356530-22356549 MS.gene74628:CDS 40.0%
! CCTGAAGAACGTTTTCTGAT+TGG - chr6.3:22355939-22355958 MS.gene74628:intron 40.0%
! CGTCAAAAGTTGATTGCAAG+CGG + chr6.3:22356259-22356278 None:intergenic 40.0%
! CTTCTTGTTGTCGTACTGTT+TGG - chr6.3:22352988-22353007 MS.gene74628:CDS 40.0%
! GACTCAAACTGCTTTCAAGT+TGG - chr6.3:22355094-22355113 MS.gene74628:CDS 40.0%
! GTACTTTCTCCAGCTATTTC+AGG - chr6.3:22353036-22353055 MS.gene74628:CDS 40.0%
! TTATACCAAAACCGACTCTC+TGG + chr6.3:22353087-22353106 None:intergenic 40.0%
! TTCTCCAGCTATTTCAGGTA+AGG - chr6.3:22353041-22353060 MS.gene74628:CDS 40.0%
! TTGACTCTTGCTGTAACCAT+TGG - chr6.3:22354721-22354740 MS.gene74628:CDS 40.0%
! TTTTCCGAGTATTTGGTTGC+AGG - chr6.3:22355462-22355481 MS.gene74628:intron 40.0%
!! AAAATCCAGAGAGTCGGTTT+TGG - chr6.3:22353079-22353098 MS.gene74628:CDS 40.0%
!! AGGAAGGTTTGTTACGAAGT+GGG + chr6.3:22355859-22355878 None:intergenic 40.0%
!! CAAAGCTTCGGTGTTGTATA+TGG - chr6.3:22352513-22352532 MS.gene74628:intron 40.0%
!! CGTTTTTGGAGAAGCACAAA+CGG - chr6.3:22352953-22352972 MS.gene74628:CDS 40.0%
!! CTTTTCAGCTTATAGGTTGG+GGG + chr6.3:22355142-22355161 None:intergenic 40.0%
!! TGTCTCAGAAGTGCTTATGT+TGG - chr6.3:22353312-22353331 MS.gene74628:CDS 40.0%
!! TTTGATGGGTTTGAGCTTTG+TGG - chr6.3:22351666-22351685 MS.gene74628:CDS 40.0%
AATACAGGTCCTGCAACACA+AGG + chr6.3:22354514-22354533 None:intergenic 45.0%
AATGGGACACTCGTATGTGA+AGG - chr6.3:22356406-22356425 MS.gene74628:intron 45.0%
ACACCTTGTGAAATGCAGGA+AGG + chr6.3:22355875-22355894 None:intergenic 45.0%
ACACGGACAATTCCTAGACT+AGG + chr6.3:22355780-22355799 None:intergenic 45.0%
ACCAACACCTTGTGAAATGC+AGG + chr6.3:22355879-22355898 None:intergenic 45.0%
ACGAAGTGGGTGAATATCGA+TGG + chr6.3:22355846-22355865 None:intergenic 45.0%
ACTCAGGGTTGGATTTCTCT+CGG - chr6.3:22353948-22353967 MS.gene74628:CDS 45.0%
AGCTTGACTCCCAACAATAG+CGG + chr6.3:22354566-22354585 None:intergenic 45.0%
AGGGAGTTTCCCCTTGAATT+GGG - chr6.3:22352035-22352054 MS.gene74628:CDS 45.0%
AGGGATTGGACTCATCTACT+CGG - chr6.3:22355803-22355822 MS.gene74628:intron 45.0%
AGTAGATGAGTCCAATCCCT+GGG + chr6.3:22355803-22355822 None:intergenic 45.0%
ATACCGATGCCAGAACTGTA+GGG + chr6.3:22353589-22353608 None:intergenic 45.0%
ATCAAGCAGTGTCATGCACT+TGG - chr6.3:22354610-22354629 MS.gene74628:intron 45.0%
ATCTACTCGGAACTTGCAAC+TGG - chr6.3:22355816-22355835 MS.gene74628:intron 45.0%
ATGGAAAAACTGTGGTTGGG+AGG - chr6.3:22351689-22351708 MS.gene74628:CDS 45.0%
ATGGTTCTCTGCAGTTGTCA+TGG - chr6.3:22352457-22352476 MS.gene74628:intron 45.0%
CACGGACAATTCCTAGACTA+GGG + chr6.3:22355779-22355798 None:intergenic 45.0%
CGCAATGTTGGAGAGCAAAT+AGG + chr6.3:22353773-22353792 None:intergenic 45.0%
CGCGTGTATGCGGAATATTA+TGG + chr6.3:22351741-22351760 None:intergenic 45.0%
CGCTCACACACATATTGAGT+TGG - chr6.3:22354954-22354973 MS.gene74628:intron 45.0%
CGTTCTTCAGGTGAGACATA+TGG + chr6.3:22355930-22355949 None:intergenic 45.0%
CGTTTCTGCGAAAGAATTGC+AGG - chr6.3:22356480-22356499 MS.gene74628:intron 45.0%
CTAGCATGTCTCATACTGGT+TGG - chr6.3:22353747-22353766 MS.gene74628:CDS 45.0%
CTGAAGGCAAACCCAATTCA+AGG + chr6.3:22352049-22352068 None:intergenic 45.0%
CTGATATAACGCCCTCTTGA+TGG - chr6.3:22355167-22355186 MS.gene74628:CDS 45.0%
GAAGCCATGTTTGCAGATCT+TGG - chr6.3:22354179-22354198 MS.gene74628:intron 45.0%
GAAGGCAAACCCAATTCAAG+GGG + chr6.3:22352047-22352066 None:intergenic 45.0%
GAATTGGGTTTGCCTTCAGT+CGG - chr6.3:22352050-22352069 MS.gene74628:CDS 45.0%
GACGGTCCATATTTCAAGCT+AGG - chr6.3:22352126-22352145 MS.gene74628:CDS 45.0%
GACTAGTGCCATCAGAAATG+TGG + chr6.3:22355517-22355536 None:intergenic 45.0%
GAGCTGTCGTCGTACAAATA+CGG - chr6.3:22352892-22352911 MS.gene74628:intron 45.0%
GATGGAAGGATGGCTGTTAT+AGG - chr6.3:22356134-22356153 MS.gene74628:intron 45.0%
GCTTCAGAACTCGAGAATTG+CGG + chr6.3:22356104-22356123 None:intergenic 45.0%
GGCTGGAGTTGCGTATATAA+TGG - chr6.3:22356388-22356407 MS.gene74628:intron 45.0%
GGTTCGTGAACCTAGTGTAA+CGG - chr6.3:22355055-22355074 MS.gene74628:CDS 45.0%
GTAAGAGGGCGAATTTGATG+TGG + chr6.3:22355228-22355247 None:intergenic 45.0%
GTCGTTGTATTGAGATCGGA+TGG + chr6.3:22351864-22351883 None:intergenic 45.0%
GTGGATGGAAAAACTGTGGT+TGG - chr6.3:22351685-22351704 MS.gene74628:CDS 45.0%
TAGGCCAAGAACTAACGTAC+CGG + chr6.3:22353994-22354013 None:intergenic 45.0%
TAGGGAGTTTCCCCTTGAAT+TGG - chr6.3:22352034-22352053 MS.gene74628:CDS 45.0%
TCAAGACTAGTACTCAGGGT+TGG - chr6.3:22353937-22353956 MS.gene74628:CDS 45.0%
TCAGGTGAGACATATGGTAC+AGG + chr6.3:22355924-22355943 None:intergenic 45.0%
TCCTGCATTTCACAAGGTGT+TGG - chr6.3:22355875-22355894 MS.gene74628:intron 45.0%
TCGTGAACACGTCAGAAAGT+CGG + chr6.3:22354433-22354452 None:intergenic 45.0%
TCTCCGATGAGGAATTTGGT+TGG + chr6.3:22351967-22351986 None:intergenic 45.0%
TGATCCAATCCAGGGTTGTT+AGG + chr6.3:22356326-22356345 None:intergenic 45.0%
TGCATGACACTGCTTGATGA+TGG + chr6.3:22354608-22354627 None:intergenic 45.0%
TGGAAAAACTGTGGTTGGGA+GGG - chr6.3:22351690-22351709 MS.gene74628:CDS 45.0%
TGGCCAACCAAATTCCTCAT+CGG - chr6.3:22351961-22351980 MS.gene74628:CDS 45.0%
TGTGGCATTACGGTATTCGT+AGG - chr6.3:22355697-22355716 MS.gene74628:intron 45.0%
TTTCAACTGCCTAACAACCC+TGG - chr6.3:22356314-22356333 MS.gene74628:intron 45.0%
! ATCACCGGTACGTTAGTTCT+TGG - chr6.3:22353987-22354006 MS.gene74628:intron 45.0%
! ATGGGTTTGAGCTTTGTGGA+TGG - chr6.3:22351670-22351689 MS.gene74628:CDS 45.0%
! CCGTGACGGAGTTTAGTTAT+TGG - chr6.3:22352250-22352269 MS.gene74628:intron 45.0%
! CTCTTTATTCGCTGCTTTGC+AGG - chr6.3:22352824-22352843 MS.gene74628:intron 45.0%
! GCCCTTAGAAGTGCAATTCT+TGG - chr6.3:22353366-22353385 MS.gene74628:CDS 45.0%
! GTGTTGCAGGACCTGTATTT+TGG - chr6.3:22354515-22354534 MS.gene74628:intron 45.0%
! TGCACTTCTAAGGGCTTGTT+TGG + chr6.3:22353361-22353380 None:intergenic 45.0%
! TGCAGGACTTGCTTGTATGA+CGG - chr6.3:22355479-22355498 MS.gene74628:intron 45.0%
! TGCTGGAAATTACCGACTGA+AGG + chr6.3:22352065-22352084 None:intergenic 45.0%
! TTACCCTACAGTTCTGGCAT+CGG - chr6.3:22353583-22353602 MS.gene74628:intron 45.0%
!! AAGTAAGAAGGCGTCGAGTA+AGG - chr6.3:22356291-22356310 MS.gene74628:intron 45.0%
!! CAGGAAGGTTTGTTACGAAG+TGG + chr6.3:22355860-22355879 None:intergenic 45.0%
!! CTATTGAGCGCCGATGATAA+CGG - chr6.3:22352684-22352703 MS.gene74628:intron 45.0%
!! TCATCGGCAGCTTGTTGATT+GGG + chr6.3:22352871-22352890 None:intergenic 45.0%
!! TGGAGTTGATTCGAAGCTTC+TGG + chr6.3:22356162-22356181 None:intergenic 45.0%
!! TTTGGTGCTTGCATGGTCAT+AGG - chr6.3:22353006-22353025 MS.gene74628:CDS 45.0%
!!! TGTCATTTTTGCGTCTCACC+AGG - chr6.3:22354152-22354171 MS.gene74628:intron 45.0%
ACACACTAACCGCGTGTATG+CGG + chr6.3:22351751-22351770 None:intergenic 50.0%
ACCATCCGATCTCGATGCAA+CGG - chr6.3:22352195-22352214 MS.gene74628:CDS 50.0%
ACTCGACGCCTTCTTACTTG+CGG + chr6.3:22356290-22356309 None:intergenic 50.0%
ACTGCCTAACAACCCTGGAT+TGG - chr6.3:22356319-22356338 MS.gene74628:intron 50.0%
AGGGTTGGATTTCTCTCGGA+GGG - chr6.3:22353952-22353971 MS.gene74628:CDS 50.0%
AGGTGTGTACGACTTTGACG+CGG + chr6.3:22354645-22354664 None:intergenic 50.0%
CAATCAACAAGCTGCCGATG+AGG - chr6.3:22352870-22352889 MS.gene74628:intron 50.0%
CACTCGCACAGTTGTCACAT+CGG - chr6.3:22352083-22352102 MS.gene74628:CDS 50.0%
CCAGTATGAGACATGCTAGC+AGG + chr6.3:22353746-22353765 None:intergenic 50.0%
CCTGCTAGCATGTCTCATAC+TGG - chr6.3:22353743-22353762 MS.gene74628:CDS 50.0%
CTACCTTGGCCGCTATTGTT+GGG - chr6.3:22354554-22354573 MS.gene74628:intron 50.0%
CTCTGTGTGTTCCGCAATGT+TGG + chr6.3:22353785-22353804 None:intergenic 50.0%
GACACTCGTATGTGAAGGCA+AGG - chr6.3:22356411-22356430 MS.gene74628:intron 50.0%
GAGTAGATGAGTCCAATCCC+TGG + chr6.3:22355804-22355823 None:intergenic 50.0%
GATACCGATGCCAGAACTGT+AGG + chr6.3:22353590-22353609 None:intergenic 50.0%
GATATGGTCGTGGACAAGCT+CGG + chr6.3:22355965-22355984 None:intergenic 50.0%
GCTTGCATGGTCATAGGTGA+TGG - chr6.3:22353012-22353031 MS.gene74628:CDS 50.0%
GGAAAAACTGTGGTTGGGAG+GGG - chr6.3:22351691-22351710 MS.gene74628:CDS 50.0%
GGAGGTCGTTGGATCAAGAT+CGG - chr6.3:22352104-22352123 MS.gene74628:CDS 50.0%
GGGATACTTCTCTGCATCAC+CGG - chr6.3:22353972-22353991 MS.gene74628:intron 50.0%
GTCGTTGGATCAAGATCGGA+CGG - chr6.3:22352108-22352127 MS.gene74628:CDS 50.0%
GTTTATCCAGATGGAGGCAG+TGG - chr6.3:22356076-22356095 MS.gene74628:intron 50.0%
TAGGAATTGTCCGTGTCCCA+GGG - chr6.3:22355784-22355803 MS.gene74628:intron 50.0%
TATCTTACGTGGACCGCACA+TGG - chr6.3:22354022-22354041 MS.gene74628:intron 50.0%
TGAAAAGGTCCTGCCATGTG+CGG + chr6.3:22354038-22354057 None:intergenic 50.0%
TTAATCCAAGCCAAGGAGGC+TGG - chr6.3:22356371-22356390 MS.gene74628:intron 50.0%
TTGAGGGGAGACCACACTAA+AGG - chr6.3:22351938-22351957 MS.gene74628:CDS 50.0%
! AAAAGTGCACCAGGGAGGAT+GGG - chr6.3:22355632-22355651 MS.gene74628:intron 50.0%
! ATCCTCCCTGGTGCACTTTT+AGG + chr6.3:22355632-22355651 None:intergenic 50.0%
! CGAAGGCGTGTATCTATCAG+CGG - chr6.3:22355602-22355621 MS.gene74628:intron 50.0%
! GCGTTCCTAAAAGTGCACCA+GGG - chr6.3:22355624-22355643 MS.gene74628:intron 50.0%
! GTCTCCGCTGAAGACGTTTT+TGG - chr6.3:22352939-22352958 MS.gene74628:intron 50.0%
! TAAAAGTGCACCAGGGAGGA+TGG - chr6.3:22355631-22355650 MS.gene74628:intron 50.0%
! TATAGGTTGGGGGCTAGTGT+TGG + chr6.3:22355132-22355151 None:intergenic 50.0%
! TTCCTAAAAGTGCACCAGGG+AGG - chr6.3:22355627-22355646 MS.gene74628:intron 50.0%
! TTGGTTGGCCACCTTTAGTG+TGG + chr6.3:22351952-22351971 None:intergenic 50.0%
!! ACAGTTCTGGCATCGGTATC+AGG - chr6.3:22353590-22353609 MS.gene74628:intron 50.0%
!! CGTACTGTTTGGTGCTTGCA+TGG - chr6.3:22352999-22353018 MS.gene74628:CDS 50.0%
!! CTCATCGGCAGCTTGTTGAT+TGG + chr6.3:22352872-22352891 None:intergenic 50.0%
!! GGGCGTCGAATTTGGATTGT+CGG - chr6.3:22351711-22351730 MS.gene74628:CDS 50.0%
AAACGTCTTCAGCGGAGACG+AGG + chr6.3:22352938-22352957 None:intergenic 55.0%
ACACGCGGTTAGTGTGTCAG+TGG - chr6.3:22351754-22351773 MS.gene74628:CDS 55.0%
ACTCCCAACAATAGCGGCCA+AGG + chr6.3:22354560-22354579 None:intergenic 55.0%
AGGGGAGACCACACTAAAGG+TGG - chr6.3:22351941-22351960 MS.gene74628:CDS 55.0%
AGGGTCGGTTGTACCTGAGA+AGG + chr6.3:22351187-22351206 None:intergenic 55.0%
AGTGGCCGTTGCATCGAGAT+CGG + chr6.3:22352203-22352222 None:intergenic 55.0%
AGTTGATTGCAAGCGGCGCA+GGG + chr6.3:22356252-22356271 None:intergenic 55.0%
ATACGCAACTCCAGCCTCCT+TGG + chr6.3:22356384-22356403 None:intergenic 55.0%
ATTGTCCGTGTCCCAGGGAT+TGG - chr6.3:22355789-22355808 MS.gene74628:intron 55.0%
CAGGGTTGGATTTCTCTCGG+AGG - chr6.3:22353951-22353970 MS.gene74628:CDS 55.0%
CTAGGAATTGTCCGTGTCCC+AGG - chr6.3:22355783-22355802 MS.gene74628:intron 55.0%
CTAGGTTTGGGCCCTAGTCT+AGG - chr6.3:22355765-22355784 MS.gene74628:intron 55.0%
CTCGACGCCTTCTTACTTGC+GGG + chr6.3:22356289-22356308 None:intergenic 55.0%
GCTACCTTGGCCGCTATTGT+TGG - chr6.3:22354553-22354572 MS.gene74628:intron 55.0%
GGAATGTTGAGAGCCACAGC+TGG + chr6.3:22356509-22356528 None:intergenic 55.0%
GGTGTGTACGACTTTGACGC+GGG + chr6.3:22354644-22354663 None:intergenic 55.0%
GTACGACGACAGCTCCTCAT+CGG + chr6.3:22352887-22352906 None:intergenic 55.0%
GTGTGTACGACTTTGACGCG+GGG + chr6.3:22354643-22354662 None:intergenic 55.0%
GTTAGTGTGTCAGTGGCCGT+TGG - chr6.3:22351761-22351780 MS.gene74628:CDS 55.0%
GTTGTCACATCGGAGGTCGT+TGG - chr6.3:22352093-22352112 MS.gene74628:CDS 55.0%
TACGGTCCTTCATCGCAGAC+TGG - chr6.3:22352910-22352929 MS.gene74628:intron 55.0%
TCGCACAGTTGTCACATCGG+AGG - chr6.3:22352086-22352105 MS.gene74628:CDS 55.0%
TGAGTCCAATCCCTGGGACA+CGG + chr6.3:22355797-22355816 None:intergenic 55.0%
TGCTCGGCCGAAATCAAGCT+TGG + chr6.3:22356182-22356201 None:intergenic 55.0%
TGTGACAACTGTGCGAGTGC+TGG + chr6.3:22352082-22352101 None:intergenic 55.0%
! AAGTTGATTGCAAGCGGCGC+AGG + chr6.3:22356253-22356272 None:intergenic 55.0%
! GGCGTTCCTAAAAGTGCACC+AGG - chr6.3:22355623-22355642 MS.gene74628:intron 55.0%
!! AGCGCCGATGATAACGGTGA+AGG - chr6.3:22352690-22352709 MS.gene74628:intron 55.0%
CAACTCCAGCCTCCTTGGCT+TGG + chr6.3:22356379-22356398 None:intergenic 60.0%
CAAGAGGAACCCATCCTCCC+TGG + chr6.3:22355644-22355663 None:intergenic 60.0%
GAATTGCAGGGGTCCAGCTG+TGG - chr6.3:22356493-22356512 MS.gene74628:intron 60.0%
GAGGCTCCAGTCTGCGATGA+AGG + chr6.3:22352919-22352938 None:intergenic 60.0%
GCAAACATGGCTTCGGCTCC+TGG + chr6.3:22354173-22354192 None:intergenic 60.0%
GCCGTTGCATCGAGATCGGA+TGG + chr6.3:22352199-22352218 None:intergenic 60.0%
GCTAGCAGGACAAGTTCGCC+TGG + chr6.3:22353732-22353751 None:intergenic 60.0%
TTACGTGGACCGCACATGGC+AGG - chr6.3:22354026-22354045 MS.gene74628:intron 60.0%
TTCGAGGGGAGACTCCGTGA+CGG - chr6.3:22352236-22352255 MS.gene74628:intron 60.0%
!! GTTGGGAGGGGCGTCGAATT+TGG - chr6.3:22351703-22351722 MS.gene74628:CDS 60.0%
GCGGTTCCACTGCCTCCATC+TGG + chr6.3:22356085-22356104 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 22351148 22356571 22351148 ID=MS.gene74628
chr6.3 mRNA 22351148 22356571 22351148 ID=MS.gene74628.t1;Parent=MS.gene74628
chr6.3 exon 22356527 22356571 22356527 ID=MS.gene74628.t1.exon1;Parent=MS.gene74628.t1
chr6.3 CDS 22356527 22356571 22356527 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22355008 22355248 22355008 ID=MS.gene74628.t1.exon2;Parent=MS.gene74628.t1
chr6.3 CDS 22355008 22355248 22355008 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22354662 22354907 22354662 ID=MS.gene74628.t1.exon3;Parent=MS.gene74628.t1
chr6.3 CDS 22354662 22354907 22354662 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22354075 22354125 22354075 ID=MS.gene74628.t1.exon4;Parent=MS.gene74628.t1
chr6.3 CDS 22354075 22354125 22354075 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22353726 22353986 22353726 ID=MS.gene74628.t1.exon5;Parent=MS.gene74628.t1
chr6.3 CDS 22353726 22353986 22353726 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22353493 22353545 22353493 ID=MS.gene74628.t1.exon6;Parent=MS.gene74628.t1
chr6.3 CDS 22353493 22353545 22353493 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22353300 22353414 22353300 ID=MS.gene74628.t1.exon7;Parent=MS.gene74628.t1
chr6.3 CDS 22353300 22353414 22353300 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22352941 22353195 22352941 ID=MS.gene74628.t1.exon8;Parent=MS.gene74628.t1
chr6.3 CDS 22352941 22353195 22352941 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
chr6.3 exon 22351148 22352235 22351148 ID=MS.gene74628.t1.exon9;Parent=MS.gene74628.t1
chr6.3 CDS 22351148 22352235 22351148 ID=cds.MS.gene74628.t1;Parent=MS.gene74628.t1
Gene Sequence

>MS.gene74628

ATGGAACCAGAATCCATAGCTTCATCTTCTCGAAATCCTTCTCAGGTACAACCGACCCTTTCTTATCTCAATCTCAAACTCATTTTTGTTTTGTCTTTTGTTCTTGTTTCATTTGACTGTGTTTTTTTTATTCATGTTTATGTTTTACTTCACTTCAACACTGTCTTTTGTTTTTGTCCTTTTTTTTTTGATAAGTTGGTATTTTATTATGCATAATTTTGATTCAAATCTTCTATTGGTCATTGAATTTTCATAGTTCATAATATTTTGAAAATTTGATTTCATACTTTGAGATTTGAGGGGTTCCAATAATTCACTATCAAGCATATCTGTAGCAGTAAAATTTAGCTTATTTCATGTGTTTTGAACTGTACTATACTTTTTATGAGTTGATAATTGATACAAGAAAGTGGTAGATGTTGATTTTCATGCAGTAGTTTATTATGTTCACATTTTTTTTAATTAATTTGTGAATTTTTATTGACATATATGATTCAATTGTTCTTCTTTAGTGTATTTTTGATGGGTTTGAGCTTTGTGGATGGAAAAACTGTGGTTGGGAGGGGCGTCGAATTTGGATTGTCGGTAGTCCATAATATTCCGCATACACGCGGTTAGTGTGTCAGTGGCCGTTGGATTGAGATTTGACAGTCATGATTTCAACCTCGGTATTTTAGTTTTTAAAAAAGTCAAAATTTTCATTGAAATCTGAACCATCCGATCTCAATACAACGACCAGTGATATCTGACTATGTGAATGCAAGGATTGCTGATTGCGAGAAATCTGAATTTGAGGGGAGACCACACTAAAGGTGGCCAACCAAATTCCTCATCGGAGATTAGTCATTGTGCATAAACTCCAACTTTGCCGATGACTAAACTTCATTAGGGAGTTTCCCCTTGAATTGGGTTTGCCTTCAGTCGGTAATTTCCAGCACTCGCACAGTTGTCACATCGGAGGTCGTTGGATCAAGATCGGACGGTCCATATTTCAAGCTAGGTACTTTAGTTTTGAAAAATAAAATAAACATCTGCAATGGAATATGGACCATCCGATCTCGATGCAACGGCCACTAACGCAATTTGAATTCGAGGGGAGACTCCGTGACGGAGTTTAGTTATTGGCAAAGCCGGTGAATACTTCACACCAATAACATGGTTACGAAAAATAAATCATTTCAGTGTAGACTTCTTTGGATTTCCACGGTTTTTCGGTTTCTACTTTGAATAATTTTCTATGGTATTGTCTACTGATTGTTTTTTCCAAGTATTATTATTCGTTAAATAATGAAATGTATCGATTTTTTTTATGGTTCTCTGCAGTTGTCATGGATTAACTTGTCTAGGAATTTACTGTTAGCATATCAAAGCTTCGGTGTTGTATATGGAGATCTAAGCACATCGCCGCTCTATGTTTATAAAAGTACATTTGAAGGAAAGTTGCAGAACCACCATGATGAAGAAACTATCTTTGGTGTTTTTTCGTTGATTTTCTGGACTCTTACATTAATACCGTTGCTTAAATATGTATTCATTCTATTGAGCGCCGATGATAACGGTGAAGGTATTCTAACGAGTAACGATATCTATTTTCCTTTTAAATTTATGTTTCAAGTGGAAAAGTTATGAACTGAATGTTATGATCATGATGCAATTATTGTCAGGTGGAACATTTGCTCTTTATTCGCTGCTTTGCAGGCATGCCAAATTTAACTTGCTTCCCAATCAACAAGCTGCCGATGAGGAGCTGTCGTCGTACAAATACGGTCCTTCATCGCAGACTGGAGCCTCGTCTCCGCTGAAGACGTTTTTGGAGAAGCACAAACGGTCAAGAACAGTTCTTCTTGTTGTCGTACTGTTTGGTGCTTGCATGGTCATAGGTGATGGTGTACTTTCTCCAGCTATTTCAGGTAAGGTAGTCTTGTAATAAGAAAATCCAGAGAGTCGGTTTTGGTATAATCCCAGAAGTGCTTAATTAAGTTCTGATAGATAAGATCTTATCATATAAGTTCTTATGGATACACTATTTCTATAACAGATAAAGTCAAACTGTTTTCCATTAAGCTGTAAGTTATTTTCATAAGCTATCTTGGAGAGCTTTAGAAATAAGCTGAAAATAAACTTACAGGCATGCCATTAGATGTTTCCATAAGCTTTCATAAACTGTCTCAGAAGTGCTTATGTTGGTAGAAAAACTCAAATAATCTAATCCAAACAAGCCCTTAGAAGTGCAATTCTTGGAACTTAATGCAGCATATTACTCTTCGCATGTTGATTTTGTGAAAGAATTAAAAGCTATGCTAGTAAAACTGATTTACGAATTTTTCATCCGTGTTCAAATTTCCATACAACAGTTTTTAGTAGATTAATACACAAGTCAATTCCTTTAACTTGTTCAAATTCTCAGTTACGGAAATTAACTGTTACTTTTCTTCTTACCCTACAGTTCTGGCATCGGTATCAGGATTAAAAGTTACGGAAACAAAATTCAATAATGGTATGCCAATTTTCATTTGCTAGAGATATTTCAATTCTTATAAAGTGAGAAATATTATATTACCTAATAAATTTCACGTTGTTTCCAGGCGAACTTGTCCTGCTAGCATGTCTCATACTGGTTGGCCTATTTGCTCTCCAACATTGCGGAACACACAGAGTTGCATTTATGTTTGCACCAATTGTAATCATCTGGCTTCTATCGATTTTTATTCTTGGGATCTATAATACGATACACTGGAATCCAAAAATAGTCTTTGCTATCTCCCCACATTATATCATCAAGTTCTTCATCAAGACTAGTACTCAGGGTTGGATTTCTCTCGGAGGGATACTTCTCTGCATCACCGGTACGTTAGTTCTTGGCCTACAAGTAGTTATCTTACGTGGACCGCACATGGCAGGACCTTTTCAGAAATAATTTACCCTTATAACTTTAAATTTAAGCGAGCTTTGATTAACTAGCTAGAAGCTGAGATTTAAAATGAGTTACTAAGTTGAATGGTTATGTCATTTTTGCGTCTCACCAGGAGCCGAAGCCATGTTTGCAGATCTTGGTCATTTTACTGCTTCGTCAATAAGGGTGAGAGCTTATAGCTTGAGTAAATTTTATGCATCAAATTTACGAGATGTCATAACATTATTATTTTTTTGTACGCAGCTTGCCTTTGCTTTTGTTATATACCCGTGTTTGGTAATGCAATACATGGGCCAAGCAGCTTTTTTGTCTAAAAACCTCGACTCTGTTCATAATAGTTTTTACGACTCAATACCTGGTTAGTAATTCCGACTTTCTGACGTGTTCACGATTCAATGTCTTTTTTTTCCTTAATGAAATCAATTTGTTTTAAATTTTTCAATGTTTTGCCTTGTGTTGCAGGACCTGTATTTTGGCCTGTTTTTGTTATTGCTACCTTGGCCGCTATTGTTGGGAGTCAAGCTACTATCACTGCTACTTTCTCCATCATCAAGCAGTGTCATGCACTTGGTTGTTTTCCCCGCGTCAAAGTCGTACACACCTCGAAACACATATTTGGACAGATATACATCCCAGAAATTAACTGGATACTTATGGTCTTGACTCTTGCTGTAACCATTGGATTTCAGGACATAACCTTAATTGGAAATGCTTATGGTAAGTTATATTTAGTTTTGAAACAGTCTATGTTTAGCGTTGAAACCAAAACTATAGGGAGATTGCATTAATGAAAAGTGAAAAGTAGAATACAGAAAGTATATGCAGAATGCTCCTAGCCCAAACTTATTTATATGCAATTAATTATAAAATGAATTATATGATTTGGATCACACGCTCACACACATATTGAGTTGGTTCATGAGCCAAACGAGTTGAACTTTGCATAGCTCAAGTTCAACTCATTTAGTCAACGAGCTCAAGTTTGACTTATTTGGTTCGTGAACCTAGTGTAACGGTTAATTACCGAATCGAGACTCAAACTGCTTTCAAGTTGGTTCGGTTCGTTGCCAACACTAGCCCCCAACCTATAAGCTGAAAAGTGTAACTGATATAACGCCCTCTTGATGGAAACGTTTCACTTTAATCAGTTCTACTTTCTCTGTCCACATCAAATTCGCCCTCTTACCGAAAAAACTTAAATTATAGTTTAATTTATATGTAATGCTTGTGCTATTTTGGTGAGTCCAATGTTTATCATATTGTTTTGCCTGCTACTGATTATGAAAAGAAATTGAAGTTTGAATGTTAGTTTTGCATTGATAAATGCACAAATTTACAAGTGCTCATTCGTCCAATCTGTATTTTGCCTATGCATGTTTTCAATTGAAATCCGTAATAAGTTTTCCGAGTATTTGGTTGCAGGACTTGCTTGTATGACGGTAATGTTCATAACCACATTTCTGATGGCACTAGTCATAATCTTTGTCTGGCAGAAAAGCATCCCGATTGCTACAATATTCCTTTTGTTCTTTTGGATTGTCGAAGGCGTGTATCTATCAGCGGCGTTCCTAAAAGTGCACCAGGGAGGATGGGTTCCTCTTGTCTTGTCCTTCTTCTTCTTGATTGTTATGTATGTGTGGCATTACGGTATTCGTAGGAAGTACAAATACGATCTACACAACAAAGTTTCATTGAAATGGTTACTAGGTTTGGGCCCTAGTCTAGGAATTGTCCGTGTCCCAGGGATTGGACTCATCTACTCGGAACTTGCAACTGGAATACCATCGATATTCACCCACTTCGTAACAAACCTTCCTGCATTTCACAAGGTGTTGGTCTTTGTTTGCGTAAAATCGGTTCCTGTACCATATGTCTCACCTGAAGAACGTTTTCTGATTGGCCGAGCTTGTCCACGACCATATCGAATGTATAGGTGCATTGTTAGATACGGGTACAAGGACATTAAAAGGGATGATGGAGAGTTTGAGAATCATCTCATACAAAGTATAATGGAGTTTATCCAGATGGAGGCAGTGGAACCGCAATTCTCGAGTTCTGAAGCTTCTTCATTTGATGGAAGGATGGCTGTTATAGGTACCAGAAGCTTCGAATCAACTCCAAGCTTGATTTCGGCCGAGCAAGAAGATGTTGATATCGACGAAAGCATCCCTAGTAGCAGATCTATAACCCTGCGCCGCTTGCAATCAACTTTTGACGATGAAAACCCGCAAGTAAGAAGGCGTCGAGTAAGGTTTCAACTGCCTAACAACCCTGGATTGGATCATGCTGTTAAAGAAGAGCTTTTAGATTTAATCCAAGCCAAGGAGGCTGGAGTTGCGTATATAATGGGACACTCGTATGTGAAGGCAAGGAAATCATCGTCGTTCTTGAAAAAGCTTGTGATCGATATGGGATACTCGTTTCTGCGAAAGAATTGCAGGGGTCCAGCTGTGGCTCTCAACATTCCTCACATCAGTCTTATCGAAGTTGGAATGATATATTATGTCTAG
Protein sequence

>MS.gene74628.t1

MEPESIASSSRNPSQLSWINLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFEGKLQNHHDEETIFGVFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQTGASSPLKTFLEKHKRSRTVLLVVVLFGACMVIGDGVLSPAISVLASVSGLKVTETKFNNGELVLLACLILVGLFALQHCGTHRVAFMFAPIVIIWLLSIFILGIYNTIHWNPKIVFAISPHYIIKFFIKTSTQGWISLGGILLCITGAEAMFADLGHFTASSIRLAFAFVIYPCLVMQYMGQAAFLSKNLDSVHNSFYDSIPGPVFWPVFVIATLAAIVGSQATITATFSIIKQCHALGCFPRVKVVHTSKHIFGQIYIPEINWILMVLTLAVTIGFQDITLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIPIATIFLLFFWIVEGVYLSAAFLKVHQGGWVPLVLSFFFLIVMYVWHYGIRRKYKYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGIPSIFTHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRACPRPYRMYRCIVRYGYKDIKRDDGEFENHLIQSIMEFIQMEAVEPQFSSSEASSFDGRMAVIGTRSFESTPSLISAEQEDVDIDESIPSSRSITLRRLQSTFDDENPQVRRRRVRFQLPNNPGLDHAVKEELLDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDMGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV