AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74931

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74931.t1 MTR_1g112740 88.945 398 30 1 239 622 1 398 0.0 679
MS.gene74931.t1 MTR_1g112740 77.155 232 48 2 2 233 91 317 3.18e-118 357
MS.gene74931.t1 MTR_1g090667 79.310 406 66 2 235 622 1 406 0.0 635
MS.gene74931.t1 MTR_1g090667 75.862 232 55 1 2 233 95 325 3.82e-116 352
MS.gene74931.t1 MTR_1g112780 80.856 397 55 3 247 622 401 797 0.0 616
MS.gene74931.t1 MTR_1g112780 74.873 394 84 2 240 619 9 401 0.0 590
MS.gene74931.t1 MTR_1g112780 76.824 233 52 2 1 233 482 712 3.02e-113 357
MS.gene74931.t1 MTR_1g112780 72.889 225 60 1 9 233 100 323 3.72e-109 347
MS.gene74931.t1 MTR_1g112750 73.645 406 89 3 235 622 1 406 0.0 554
MS.gene74931.t1 MTR_1g112750 87.983 233 24 2 1 233 94 322 1.20e-137 407
MS.gene74931.t1 MTR_5g013260 37.037 405 228 6 238 622 41 438 4.55e-76 249
MS.gene74931.t1 MTR_5g013260 37.751 249 148 3 3 248 128 372 1.41e-42 159
MS.gene74931.t1 MTR_5g013250 36.207 406 234 6 234 622 33 430 1.27e-72 240
MS.gene74931.t1 MTR_5g013250 38.222 225 132 3 12 233 133 353 1.14e-41 156
MS.gene74931.t1 MTR_4g035655 34.211 380 228 5 235 596 476 851 9.07e-61 218
MS.gene74931.t1 MTR_4g035655 33.240 358 216 6 235 574 1 353 1.61e-53 197
MS.gene74931.t1 MTR_4g035655 36.726 226 138 3 12 233 572 796 8.74e-44 168
MS.gene74931.t1 MTR_4g035655 35.398 226 141 3 12 233 97 321 4.79e-42 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74931.t1 AT5G05320 49.140 407 183 4 235 621 1 403 6.92e-135 400
MS.gene74931.t1 AT5G05320 54.955 222 96 2 12 233 100 317 6.39e-78 253
MS.gene74931.t1 AT4G38540 50.735 408 177 4 235 621 1 405 9.55e-128 382
MS.gene74931.t1 AT4G38540 50.901 222 106 1 12 233 100 318 1.27e-66 223
MS.gene74931.t1 AT2G35660 37.093 399 226 7 240 621 44 434 9.71e-72 238
MS.gene74931.t1 AT2G35660 39.462 223 132 2 12 233 138 358 4.70e-41 155
MS.gene74931.t1 AT2G29720 36.141 368 212 6 253 605 55 414 1.45e-64 219
MS.gene74931.t1 AT2G29720 38.117 223 135 2 12 233 136 356 2.17e-40 153
MS.gene74931.t1 AT4G15760 31.538 390 242 6 251 621 39 422 5.26e-56 196
MS.gene74931.t1 AT4G15760 33.036 224 145 2 12 233 119 339 1.45e-37 145
MS.gene74931.t1 AT4G15760 31.095 402 240 7 251 621 39 434 3.80e-55 194
MS.gene74931.t1 AT4G15760 33.036 224 145 2 12 233 131 351 2.05e-37 144
MS.gene74931.t1 AT2G35660 34.688 320 185 6 319 621 8 320 2.43e-46 167
MS.gene74931.t1 AT2G35660 39.462 223 132 2 12 233 24 244 6.91e-42 154
MS.gene74931.t1 AT2G35660 34.688 320 185 6 319 621 8 320 2.43e-46 167
MS.gene74931.t1 AT2G35660 39.462 223 132 2 12 233 24 244 6.91e-42 154
MS.gene74931.t1 AT4G15765 29.795 292 169 7 239 523 1 263 3.82e-32 125
MS.gene74931.t1 AT4G15765 26.699 206 138 3 12 215 69 263 4.04e-21 94.0
MS.gene74931.t1 AT4G15765 25.946 185 135 2 31 215 8 190 1.87e-21 93.2
MS.gene74931.t1 AT4G15765 23.529 153 116 1 372 523 38 190 1.23e-13 70.5
MS.gene74931.t1 AT4G15765 25.946 185 135 2 31 215 8 190 1.87e-21 93.2
MS.gene74931.t1 AT4G15765 23.529 153 116 1 372 523 38 190 1.23e-13 70.5
MS.gene74931.t1 AT4G15765 25.946 185 135 2 31 215 8 190 1.87e-21 93.2
MS.gene74931.t1 AT4G15765 23.529 153 116 1 372 523 38 190 1.23e-13 70.5
MS.gene74931.t1 AT4G15765 25.946 185 135 2 31 215 8 190 1.87e-21 93.2
MS.gene74931.t1 AT4G15765 23.529 153 116 1 372 523 38 190 1.23e-13 70.5
MS.gene74931.t1 AT5G67030 24.869 382 225 12 231 572 71 430 1.54e-15 80.5
MS.gene74931.t1 AT5G67030 24.869 382 225 12 231 572 71 430 2.92e-15 79.7

Find 146 sgRNAs with CRISPR-Local

Find 423 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTTCCTTTGGTTTCT+TGG 0.080457 1.3:+76486019 None:intergenic
CAAAATTTGTTAACTTCTTT+AGG 0.144756 1.3:-76485884 MS.gene74931:CDS
GTCAAAGGTTGTTGCTATTC+AGG 0.183324 1.3:-76486859 MS.gene74931:CDS
CTTCTTTAGGGATAAAATTC+TGG 0.205709 1.3:-76485871 MS.gene74931:CDS
GCGGATTTGCTTTAACAATA+TGG 0.223001 1.3:-76488109 MS.gene74931:CDS
CGTCCTTGGGAGCTTATAAT+TGG 0.230667 1.3:-76490390 MS.gene74931:CDS
AATATGCAAGTGAGAGAAAA+TGG 0.232349 1.3:-76485965 MS.gene74931:CDS
GGTATTTCACCTTGGCTAAT+AGG 0.258501 1.3:+76486564 None:intergenic
AAAATTTGTTAACTTCTTTA+GGG 0.269584 1.3:-76485883 MS.gene74931:CDS
AAAGACAATGTTTGTATTGC+TGG 0.273414 1.3:-76490357 MS.gene74931:CDS
TGCTGGTCTCACAACATCTT+TGG 0.308223 1.3:-76489050 MS.gene74931:CDS
AAAGGAAATGTTTGTGTTGT+TGG 0.311040 1.3:-76486140 MS.gene74931:CDS
CGGATTTGCTTTAACAATAT+GGG 0.317160 1.3:-76488108 MS.gene74931:CDS
TTCCTTTGGTTTCTTGGAAA+AGG 0.321296 1.3:+76486025 None:intergenic
TTGTATTCTTCTTCTTCCTT+TGG 0.323398 1.3:+76486011 None:intergenic
GTGATGACAAGTGTGCTTAT+TGG 0.331848 1.3:-76490842 MS.gene74931:CDS
GTTGTTGCTATTCAGGAATC+TGG 0.332949 1.3:-76486852 MS.gene74931:CDS
AAAATATTACATCTTGTTGA+TGG 0.342630 1.3:-76486822 MS.gene74931:CDS
TGCATATCTCCCTGTGTTAG+AGG 0.344088 1.3:+76486719 None:intergenic
GTGAAGTTCGTTGTGTTAGA+AGG 0.345398 1.3:-76486938 MS.gene74931:CDS
GTGGTTGCTATTCAAGAATC+TGG 0.357986 1.3:-76492057 MS.gene74931:CDS
TTCAAAGAGGCCTCTAACAC+AGG 0.364705 1.3:-76486729 MS.gene74931:CDS
ATTGTGGGAGCTGGAATTGC+TGG 0.365284 1.3:-76489067 MS.gene74931:CDS
AGCTTCCAAGTGGCACTATT+AGG 0.367504 1.3:-76492092 MS.gene74931:CDS
GTGATGAGAGGAGTGTTTAT+TGG 0.370317 1.3:-76486602 MS.gene74931:CDS
TTGTATTCACCTTGCTTGCT+AGG 0.372193 1.3:+76490801 None:intergenic
GGGTGTTGTGCTTTAGAGGA+TGG 0.372973 1.3:-76486077 MS.gene74931:CDS
GGGTGTTGTGCTTTAGAGGA+TGG 0.372973 1.3:-76490294 MS.gene74931:CDS
TGAACTCTATGGTGGCAAAA+TGG 0.376691 1.3:-76490998 MS.gene74931:CDS
GGCAAAATGGTTAGGCTTCA+AGG 0.377121 1.3:-76490985 MS.gene74931:CDS
CATCGACATATTCAACTTCA+TGG 0.377254 1.3:-76488035 MS.gene74931:CDS
GTGACGACTACTTTGATTAC+GGG 0.384896 1.3:-76487118 MS.gene74931:CDS
GGTGTTGTGCTTTAGAGGAT+GGG 0.387261 1.3:-76486076 MS.gene74931:CDS
GGTGTTGTGCTTTAGAGGAT+GGG 0.387261 1.3:-76490293 MS.gene74931:CDS
TGACCAAGATCAGGTGTCAT+AGG 0.390228 1.3:+76486104 None:intergenic
CACCCTATGACACCTGATCT+TGG 0.391704 1.3:-76486107 MS.gene74931:CDS
TGTGACGACTACTTTGATTA+CGG 0.393200 1.3:-76487119 MS.gene74931:CDS
GCCTTGGATGTTGTTGGTGT+TGG 0.395609 1.3:-76488071 MS.gene74931:CDS
ATTACTGCATCTTATATTGT+GGG 0.404848 1.3:-76485927 MS.gene74931:CDS
AATAGTTATGGAAAGTGTAA+TGG 0.415988 1.3:-76489104 MS.gene74931:intron
TGGAAGGCCTTGGATGTTGT+TGG 0.417071 1.3:-76488077 MS.gene74931:CDS
ACATATTGTTTCAGATTAGC+AGG 0.417614 1.3:+76486290 None:intergenic
AAAATTTGAAAGGTATTGAT+TGG 0.421221 1.3:-76491032 MS.gene74931:intron
GTGTTGTGCTTTAGAGGATG+GGG 0.426399 1.3:-76486075 MS.gene74931:CDS
GTGTTGTGCTTTAGAGGATG+GGG 0.426399 1.3:-76490292 MS.gene74931:CDS
CATTACTGCATCTTATATTG+TGG 0.430022 1.3:-76485928 MS.gene74931:CDS
TTTCCTTTGTTATTCTTGAA+AGG 0.430760 1.3:+76487076 None:intergenic
CCACCTTGAAAACCTTTGCC+TGG 0.432731 1.3:+76490876 None:intergenic
TGGAGATGCTTTGCACCCTA+TGG 0.434991 1.3:-76490337 MS.gene74931:CDS
TGTTAGAAGAAAGTTATTGT+TGG 0.451552 1.3:-76492130 MS.gene74931:CDS
TACAAAACTCTCCACGTAAG+AGG 0.457475 1.3:+76490959 None:intergenic
CCAATGTTCATGCAGTACTT+TGG 0.458036 1.3:-76486654 MS.gene74931:CDS
TAACAATATGGGAAAATGCT+TGG 0.460242 1.3:-76488097 MS.gene74931:CDS
TGTTAGAAGGAAGTTATTGT+TGG 0.460274 1.3:-76486925 MS.gene74931:CDS
GGAAAATGCTTGGAAGGCCT+TGG 0.464232 1.3:-76488087 MS.gene74931:CDS
AACCTTTGACATGTACCTAA+TGG 0.465605 1.3:+76486872 None:intergenic
TCTAACACAACGAACTTCAC+AGG 0.470521 1.3:+76492146 None:intergenic
CATTGAGATATAGACGTCCT+TGG 0.472350 1.3:-76490404 MS.gene74931:CDS
CATTGAGATATAGACATCCT+TGG 0.475442 1.3:-76486187 MS.gene74931:CDS
AGCTTCCTAGTGGCACCATT+AGG 0.478225 1.3:-76486887 MS.gene74931:CDS
CTTTAACTCTGCATAACCTC+TGG 0.478251 1.3:+76486695 None:intergenic
ATGATAGATCTAACATAACT+TGG 0.482878 1.3:+76490462 None:intergenic
CAACATCTTTGGCACTTCAC+AGG 0.490371 1.3:-76489039 MS.gene74931:intron
ACATCCTTGGGAGCTTATGA+TGG 0.490825 1.3:-76486174 MS.gene74931:CDS
TCTGTGGTGGCAAAGTGGTT+AGG 0.491813 1.3:-76486753 MS.gene74931:intron
GGAAGAAGATATTGTGATTG+TGG 0.495610 1.3:-76489083 MS.gene74931:CDS
ATTGAGATATAGACATCCTT+GGG 0.500029 1.3:-76486186 MS.gene74931:CDS
AGTGCCACTTGGAAGCTCAT+TGG 0.500633 1.3:+76492098 None:intergenic
AGGAAGAAGAAGAATACAAA+AGG 0.505964 1.3:-76486007 MS.gene74931:CDS
TGGTTTCTTGGAAAAGGCCT+CGG 0.506552 1.3:+76486031 None:intergenic
TTGTGCTTTAGAGGATGGGG+TGG 0.506803 1.3:-76486072 MS.gene74931:CDS
TTGTGCTTTAGAGGATGGGG+TGG 0.506803 1.3:-76490289 MS.gene74931:CDS
GTGTGATGGAGTGAACTCTA+TGG 0.507728 1.3:-76491009 MS.gene74931:CDS
TCTATGGTGGCAAAATGGTT+AGG 0.510513 1.3:-76490993 MS.gene74931:CDS
AGAAGAATACAAAAGGATTG+AGG 0.512161 1.3:-76486000 MS.gene74931:CDS
TAGGGGTTATGCAGAGTTGA+AGG 0.512223 1.3:-76490934 MS.gene74931:CDS
ATTGAGATATAGACGTCCTT+GGG 0.513919 1.3:-76490403 MS.gene74931:CDS
CAAGGATGTCTATATCTCAA+TGG 0.515761 1.3:+76486188 None:intergenic
TCGAATAGTTTGCGAGTAAG+CGG 0.516449 1.3:-76488128 MS.gene74931:CDS
GATATTGTGATTGTGGGAGC+TGG 0.518765 1.3:-76489076 MS.gene74931:CDS
CACCTTGAAAACCTTTGCCT+GGG 0.520382 1.3:+76490877 None:intergenic
CCAAAGTACTGCATGAACAT+TGG 0.523201 1.3:+76486654 None:intergenic
AAAATACTCCATCTTGCTGA+TGG 0.525970 1.3:-76492027 MS.gene74931:CDS
ATGATGGGAAATATTAGTAA+AGG 0.531699 1.3:-76486158 MS.gene74931:CDS
CAAGGACGTCTATATCTCAA+TGG 0.532851 1.3:+76490405 None:intergenic
TTGTTGTTCCATCAGCAAGA+TGG 0.534536 1.3:+76492019 None:intergenic
AAGGTATTGATTGGGTGTGA+TGG 0.536631 1.3:-76491023 MS.gene74931:CDS
AAATTTGAAAGGTATTGATT+GGG 0.538486 1.3:-76491031 MS.gene74931:intron
TTCATGCAGTACTTTGGCAA+AGG 0.540273 1.3:-76486648 MS.gene74931:CDS
GACCAAGATCAGGTGTCATA+GGG 0.545249 1.3:+76486105 None:intergenic
TGTGCGATATAAGGTGCCAT+AGG 0.548512 1.3:+76490321 None:intergenic
AATATGGGAAAATGCTTGGA+AGG 0.553301 1.3:-76488093 MS.gene74931:CDS
GAAGAAGATATTGTGATTGT+GGG 0.553596 1.3:-76489082 MS.gene74931:CDS
TTTGTTATTCTTGAAAGGTG+TGG 0.554455 1.3:+76487081 None:intergenic
GGGCTCTTCCATGTGATGAG+AGG 0.554636 1.3:-76486614 MS.gene74931:CDS
GTGGGTTATATTCAACAAAG+TGG 0.555643 1.3:-76485909 MS.gene74931:CDS
GGTGCCACTAGGAAGCTCAT+TGG 0.561305 1.3:+76486893 None:intergenic
CCTGGGTATATCATGAACAT+TGG 0.565547 1.3:+76490894 None:intergenic
GTTGAATATGTCGATGGCGA+AGG 0.567318 1.3:+76488042 None:intergenic
TGCTAATCTGAAACAATATG+TGG 0.570705 1.3:-76486288 MS.gene74931:CDS
ATGACACCTGATCTTGGTCA+AGG 0.570907 1.3:-76486101 MS.gene74931:CDS
CACCATTAGGTACATGTCAA+AGG 0.572299 1.3:-76486874 MS.gene74931:CDS
TTTAGCAAGGTGCTTAGCCG+AGG 0.575073 1.3:-76486048 MS.gene74931:CDS
TTTCCAATTATAAGCTCCCA+AGG 0.577322 1.3:+76490387 None:intergenic
ATCGACATATTCAACTTCAT+GGG 0.578947 1.3:-76488034 MS.gene74931:intron
GTGCGATATAAGGTGCCATA+GGG 0.583014 1.3:+76490322 None:intergenic
TGACACCTGATCTTGGTCAA+GGG 0.585117 1.3:-76486100 MS.gene74931:CDS
CATATTGTTTCAGATTAGCA+GGG 0.586481 1.3:+76486291 None:intergenic
CACTATTAGGTACTTATCAA+AGG 0.589383 1.3:-76492079 MS.gene74931:CDS
TCTTCAACAGTTGAACAGCT+AGG 0.593198 1.3:+76485841 None:intergenic
CATCCTTGGGAGCTTATGAT+GGG 0.594050 1.3:-76486173 MS.gene74931:CDS
TTTCCCATCATAAGCTCCCA+AGG 0.596739 1.3:+76486170 None:intergenic
CTTCAAGGAGGCCTCTTACG+TGG 0.598000 1.3:-76490970 MS.gene74931:CDS
TTCATGATATACCCAGGCAA+AGG 0.600582 1.3:-76490888 MS.gene74931:CDS
GACACCTGATCTTGGTCAAG+GGG 0.601603 1.3:-76486099 MS.gene74931:CDS
ACATGGACTCCTATTAGCCA+AGG 0.609077 1.3:-76486573 MS.gene74931:intron
CATGAAGTTGAATATGTCGA+TGG 0.612735 1.3:+76488036 None:intergenic
TAAACACTCCTCTCATCACA+TGG 0.612843 1.3:+76486606 None:intergenic
TCCAACACCAACAACATCCA+AGG 0.623961 1.3:+76488070 None:intergenic
GGCACCTTATATCGCACAAG+GGG 0.624597 1.3:-76490316 MS.gene74931:CDS
CTAACACAACGAACTTCACA+GGG 0.625635 1.3:+76492147 None:intergenic
ACACCTTTCAAGAATAACAA+AGG 0.628535 1.3:-76487079 MS.gene74931:CDS
TCAAAGAGGCCTCTAACACA+GGG 0.635552 1.3:-76486728 MS.gene74931:CDS
ATGTACCTAATGGTGCCACT+AGG 0.636331 1.3:+76486882 None:intergenic
TATTAGGTACTTATCAAAGG+TGG 0.643674 1.3:-76492076 MS.gene74931:CDS
CATTGGTTCAAGCTTGTGAG+TGG 0.645311 1.3:+76486671 None:intergenic
TGTACTTCTCCTAGCAAGCA+AGG 0.645404 1.3:-76490810 MS.gene74931:intron
CACCTGATCTTGGTCAAGGG+GGG 0.646163 1.3:-76486097 MS.gene74931:CDS
ACGTCTTTCATGGACAACAA+AGG 0.652008 1.3:-76492310 None:intergenic
CCAATGTTCATGATATACCC+AGG 0.658894 1.3:-76490894 MS.gene74931:CDS
TAAGCACACTTGTCATCACA+TGG 0.662663 1.3:+76490846 None:intergenic
CTTACCAATGAGCTTCCAAG+TGG 0.664772 1.3:-76492102 MS.gene74931:CDS
ATGGCACCTTATATCGCACA+AGG 0.665939 1.3:-76490318 MS.gene74931:CDS
CTTGCCAATGAGCTTCCTAG+TGG 0.666218 1.3:-76486897 MS.gene74931:CDS
AAGTACCTAATAGTGCCACT+TGG 0.667803 1.3:+76492087 None:intergenic
ACACCTGATCTTGGTCAAGG+GGG 0.668650 1.3:-76486098 MS.gene74931:CDS
TGACGACTACTTTGATTACG+GGG 0.673218 1.3:-76487117 MS.gene74931:CDS
CACCTTATATCGCACAAGGG+GGG 0.686911 1.3:-76490314 MS.gene74931:CDS
TGGAACAACAATCAAAACCA+AGG 0.693752 1.3:-76492007 MS.gene74931:intron
GCACCTTATATCGCACAAGG+GGG 0.699638 1.3:-76490315 MS.gene74931:CDS
TGGAACAACCATCAAAACCA+AGG 0.703968 1.3:-76486802 MS.gene74931:intron
TGATGGAGTGAACTCTATGG+TGG 0.705940 1.3:-76491006 MS.gene74931:CDS
TGGCACCTTATATCGCACAA+GGG 0.711434 1.3:-76490317 MS.gene74931:CDS
AAAGTGGTTAGGCTTCAAAG+AGG 0.718391 1.3:-76486742 MS.gene74931:intron
ACAGGGAGATATGCAACCAG+AGG 0.723621 1.3:-76486711 MS.gene74931:CDS
AAAATGGTTAGGCTTCAAGG+AGG 0.781388 1.3:-76490982 MS.gene74931:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAATAAATACAATT+TGG - chr1.3:76490867-76490886 MS.gene74931:CDS 10.0%
!! AATTAAAAAAAGAATAAATG+TGG - chr1.3:76488674-76488693 MS.gene74931:intron 10.0%
!! AGAAAAAATAAATACAATTT+GGG - chr1.3:76490868-76490887 MS.gene74931:CDS 10.0%
!!! AAAATAGTATATTGTTTTTT+GGG - chr1.3:76489141-76489160 MS.gene74931:intron 10.0%
!!! AAAATTTGTTAACTTTTTTA+AGG - chr1.3:76488016-76488035 MS.gene74931:intron 10.0%
!!! AAATTTGTTAACTTTTTTAA+GGG - chr1.3:76488017-76488036 MS.gene74931:intron 10.0%
!!! ATAATTTTGTTATTTACATA+TGG - chr1.3:76490132-76490151 MS.gene74931:intron 10.0%
!!! ATTCTAAAAAATTTACTAAT+CGG + chr1.3:76491724-76491743 None:intergenic 10.0%
!!! ATTTTAGTTTTTATTATAAG+TGG - chr1.3:76486769-76486788 MS.gene74931:intron 10.0%
!!! CATTTATTCTTTTTTTAATT+AGG + chr1.3:76488674-76488693 None:intergenic 10.0%
!!! TAAAATAGTATATTGTTTTT+TGG - chr1.3:76489140-76489159 MS.gene74931:intron 10.0%
!!! TAAATTAATATATGGTTTTT+GGG + chr1.3:76488986-76489005 None:intergenic 10.0%
!!! TAGTAAATTTTTTAGAATAT+TGG - chr1.3:76491726-76491745 MS.gene74931:intron 10.0%
!!! TAGTATAATTTTTAAATCAT+TGG - chr1.3:76487508-76487527 MS.gene74931:intron 10.0%
!!! TTAAATTAATATATGGTTTT+TGG + chr1.3:76488987-76489006 None:intergenic 10.0%
!!! TTTTAATTTGATTTTAATGT+TGG - chr1.3:76489708-76489727 MS.gene74931:intron 10.0%
!!! TTTTTATTTATAAATATGAC+CGG - chr1.3:76486392-76486411 MS.gene74931:intron 10.0%
!! AAGAAGTTTATATATATAGT+TGG + chr1.3:76488853-76488872 None:intergenic 15.0%
!! AATATTTCACATTAATAGTA+TGG + chr1.3:76490684-76490703 None:intergenic 15.0%
!! ACATAACATATAAAATAGAT+AGG - chr1.3:76486568-76486587 MS.gene74931:intron 15.0%
!! AGAAGTTTATATATATAGTT+GGG + chr1.3:76488852-76488871 None:intergenic 15.0%
!! CAAATTAAATATATATCACT+TGG - chr1.3:76489411-76489430 MS.gene74931:intron 15.0%
!! CATTGAATAATTAATATATC+CGG + chr1.3:76486357-76486376 None:intergenic 15.0%
!! GTTAAAAAAAAAACAATCTA+AGG - chr1.3:76488564-76488583 MS.gene74931:intron 15.0%
!! TGAAAATAAAATGTTAATGT+TGG - chr1.3:76489643-76489662 MS.gene74931:intron 15.0%
!!! AAAAAATAACATTTTGTTGA+TGG + chr1.3:76486835-76486854 None:intergenic 15.0%
!!! AAAATTTGTTAACTTCTTTA+GGG - chr1.3:76492227-76492246 MS.gene74931:intron 15.0%
!!! AAATTTTTTTCTCTTTCAAT+TGG - chr1.3:76491604-76491623 MS.gene74931:intron 15.0%
!!! ACACTAAAATGATATAATTT+TGG - chr1.3:76490339-76490358 MS.gene74931:CDS 15.0%
!!! ATTGTTAACTTTTAGATTTT+TGG - chr1.3:76490241-76490260 MS.gene74931:intron 15.0%
!!! TAAGTAAAAAACAACTTTTT+AGG - chr1.3:76486293-76486312 MS.gene74931:CDS 15.0%
!!! TATTAATTTTATTTAGAGAG+AGG + chr1.3:76490193-76490212 None:intergenic 15.0%
!!! TTTTGTATTTCTTACAAAAT+AGG - chr1.3:76489569-76489588 MS.gene74931:intron 15.0%
!!! TTTTTTAACCATTTGTTTTT+AGG + chr1.3:76488553-76488572 None:intergenic 15.0%
!! AAAATAAATACAATTTGGGA+CGG - chr1.3:76490872-76490891 MS.gene74931:CDS 20.0%
!! AAAATATTACATCTTGTTGA+TGG - chr1.3:76491288-76491307 MS.gene74931:intron 20.0%
!! AAATATTGTTCACTTTGTAA+TGG - chr1.3:76490697-76490716 MS.gene74931:intron 20.0%
!! AAATTCAAATGAACCAATTA+TGG - chr1.3:76487382-76487401 MS.gene74931:intron 20.0%
!! AAGTAGAAGAAGAATATAAA+AGG - chr1.3:76487892-76487911 MS.gene74931:intron 20.0%
!! AATCAACATAAAATCATACT+TGG + chr1.3:76488219-76488238 None:intergenic 20.0%
!! AATTACTACAAGTTATATTG+TGG - chr1.3:76487971-76487990 MS.gene74931:intron 20.0%
!! ACTAAATTGTTCAATTCAAA+TGG + chr1.3:76487492-76487511 None:intergenic 20.0%
!! AGATAGTATATACAACAATT+AGG - chr1.3:76489196-76489215 MS.gene74931:intron 20.0%
!! ATAGTATATACAACAATTAG+GGG - chr1.3:76489198-76489217 MS.gene74931:intron 20.0%
!! ATCATAATTGTACTACAATT+TGG + chr1.3:76491657-76491676 None:intergenic 20.0%
!! ATGAATATGCAAAAGAAAAA+TGG + chr1.3:76491581-76491600 None:intergenic 20.0%
!! ATTACTACAAGTTATATTGT+GGG - chr1.3:76487972-76487991 MS.gene74931:intron 20.0%
!! ATTCATAAGATAACAATCAT+TGG + chr1.3:76488644-76488663 None:intergenic 20.0%
!! ATTTCATATACAGACAAAAA+AGG - chr1.3:76486877-76486896 MS.gene74931:CDS 20.0%
!! CATTAAATCAATCATTAACT+AGG + chr1.3:76488282-76488301 None:intergenic 20.0%
!! GATAGTATATACAACAATTA+GGG - chr1.3:76489197-76489216 MS.gene74931:intron 20.0%
!! GTCAAAATTAATTTACTTGA+TGG + chr1.3:76490458-76490477 None:intergenic 20.0%
!! TACATAGTTGAAAATATGAA+CGG + chr1.3:76486630-76486649 None:intergenic 20.0%
!! TATCTATTATTAATTGTTCG+CGG + chr1.3:76489912-76489931 None:intergenic 20.0%
!! TATTTATTTATCTTGCAGTT+CGG - chr1.3:76489852-76489871 MS.gene74931:intron 20.0%
!! TCAACAAAAAAAACAATCAA+TGG + chr1.3:76488613-76488632 None:intergenic 20.0%
!! TGAATATGCAAAAGAAAAAT+GGG + chr1.3:76491580-76491599 None:intergenic 20.0%
!! TGATAAAAATAAGTGAAAGA+GGG + chr1.3:76489099-76489118 None:intergenic 20.0%
!! TGGTAATTTGAAAATTTGAA+AGG - chr1.3:76487068-76487087 MS.gene74931:intron 20.0%
!!! AAAAACTTGATTTGGAAATT+AGG - chr1.3:76490966-76490985 MS.gene74931:CDS 20.0%
!!! AAAATTTGAAAGGTATTGAT+TGG - chr1.3:76487078-76487097 MS.gene74931:CDS 20.0%
!!! AAATTTGAAAGGTATTGATT+GGG - chr1.3:76487079-76487098 MS.gene74931:CDS 20.0%
!!! AAGACATAGTTTCTTTTTTT+TGG + chr1.3:76488421-76488440 None:intergenic 20.0%
!!! AGTGATTGTCTAATTTTTTT+TGG + chr1.3:76490530-76490549 None:intergenic 20.0%
!!! CAAAATTTGTTAACTTCTTT+AGG - chr1.3:76492226-76492245 MS.gene74931:intron 20.0%
!!! GATATTCTAAAAACTTGATT+TGG - chr1.3:76490958-76490977 MS.gene74931:CDS 20.0%
!!! TATATGGTATTTGTTTTCTT+TGG - chr1.3:76490556-76490575 MS.gene74931:intron 20.0%
!!! TATATTTTAAGCCTTTTTTG+AGG + chr1.3:76488935-76488954 None:intergenic 20.0%
!!! TTTTTACTTATAAATGTGAC+CGG + chr1.3:76486283-76486302 None:intergenic 20.0%
! AAAGAAAAATGGGAAGAAAA+TGG + chr1.3:76491570-76491589 None:intergenic 25.0%
! AAATCGTAAAAAACAGCATT+TGG - chr1.3:76489277-76489296 MS.gene74931:intron 25.0%
! AAATTTACTAATCGGTCAAT+TGG + chr1.3:76491716-76491735 None:intergenic 25.0%
! AACACATATATTGTTTACCT+TGG + chr1.3:76486123-76486142 None:intergenic 25.0%
! AAGAAGAATAAACAGAATTG+TGG + chr1.3:76485911-76485930 None:intergenic 25.0%
! ACGTAGACTAAATTTAAATG+CGG + chr1.3:76489604-76489623 None:intergenic 25.0%
! AGATAAATAAATATGCGGTT+TGG + chr1.3:76489845-76489864 None:intergenic 25.0%
! AGTGATTATTTGACAATTGA+TGG + chr1.3:76490841-76490860 None:intergenic 25.0%
! ATCTAACTCATAAATATGAC+CGG - chr1.3:76486335-76486354 MS.gene74931:intron 25.0%
! ATGAGATTAAATTATAGCTC+GGG - chr1.3:76488802-76488821 MS.gene74931:intron 25.0%
! ATGATAGATCTAACATAACT+TGG + chr1.3:76487651-76487670 None:intergenic 25.0%
! ATTACTGCATCTTATATTGT+GGG - chr1.3:76492183-76492202 MS.gene74931:intron 25.0%
! CAATAAGAAGAATATAGAGT+TGG + chr1.3:76491128-76491147 None:intergenic 25.0%
! CATGAGATTAAATTATAGCT+CGG - chr1.3:76488801-76488820 MS.gene74931:intron 25.0%
! CTGCAAGATAAATAAATATG+CGG + chr1.3:76489850-76489869 None:intergenic 25.0%
! GAATATAAAAGGATTGAAGA+AGG - chr1.3:76487903-76487922 MS.gene74931:intron 25.0%
! GCAAAAGATATCTAATGAAT+GGG - chr1.3:76488704-76488723 MS.gene74931:intron 25.0%
! GTGATAAAAATAAGTGAAAG+AGG + chr1.3:76489100-76489119 None:intergenic 25.0%
! TATTTAGACAGATCAGTAAA+AGG + chr1.3:76489122-76489141 None:intergenic 25.0%
! TATTTATAAATATGACCGGA+GGG - chr1.3:76486396-76486415 MS.gene74931:intron 25.0%
! TCAATTTCTACTCATAATCA+TGG + chr1.3:76486912-76486931 None:intergenic 25.0%
! TGCAAAAGATATCTAATGAA+TGG - chr1.3:76488703-76488722 MS.gene74931:intron 25.0%
! TGTTAGAAGAAAGTTATTGT+TGG - chr1.3:76485980-76485999 MS.gene74931:CDS 25.0%
! TTATTTATAAATATGACCGG+AGG - chr1.3:76486395-76486414 MS.gene74931:intron 25.0%
! TTTGTGTTTGTCATATATTG+CGG + chr1.3:76489395-76489414 None:intergenic 25.0%
!! AAATTCAATTTTGCAAGCTA+AGG - chr1.3:76488750-76488769 MS.gene74931:intron 25.0%
!! AATAGTTATGGAAAGTGTAA+TGG - chr1.3:76489006-76489025 MS.gene74931:intron 25.0%
!! AGCATTTTCCTAAAAACAAA+TGG - chr1.3:76488542-76488561 MS.gene74931:intron 25.0%
!! ATACATTTTTGCATTTCCAT+AGG - chr1.3:76490771-76490790 MS.gene74931:intron 25.0%
!! ATGATGGGAAATATTAGTAA+AGG - chr1.3:76491952-76491971 MS.gene74931:intron 25.0%
!! GTTTTTCTATTGAATTGGTT+CGG + chr1.3:76489233-76489252 None:intergenic 25.0%
!! TCAAAATTTGACTTCTTCAA+CGG + chr1.3:76488074-76488093 None:intergenic 25.0%
!! TGTAACCATTCTATTTCTTT+GGG + chr1.3:76488344-76488363 None:intergenic 25.0%
!! TTTTTCTCTTTCAATTGGAT+TGG - chr1.3:76491609-76491628 MS.gene74931:intron 25.0%
!!! AAGAAGTCAAATTTTGATTG+TGG - chr1.3:76488077-76488096 MS.gene74931:CDS 25.0%
!!! AATGCTGTTTTTTACGATTT+TGG + chr1.3:76489277-76489296 None:intergenic 25.0%
!!! ACATATTGTTTTAGTTTAGC+AGG + chr1.3:76487606-76487625 None:intergenic 25.0%
!!! ATCTAATTTTAACTGTGTTG+TGG - chr1.3:76486978-76486997 MS.gene74931:intron 25.0%
!!! CAATCTAAGGATTTTTTTAG+AGG - chr1.3:76488577-76488596 MS.gene74931:intron 25.0%
!!! CAATGTATAGTGTTATTTGT+TGG - chr1.3:76490382-76490401 MS.gene74931:CDS 25.0%
!!! GTGGGTTTTATTAATGAAAA+TGG - chr1.3:76487990-76488009 MS.gene74931:intron 25.0%
!!! TGTTTTTTACGATTTTGGTT+TGG + chr1.3:76489272-76489291 None:intergenic 25.0%
!!! TTTCAGCCAAAATTTTAACT+AGG + chr1.3:76490907-76490926 None:intergenic 25.0%
!!! TTTCCTTTGTTATTCTTGAA+AGG + chr1.3:76491037-76491056 None:intergenic 25.0%
!!! TTTGTGTTGATTCTAAAAGT+TGG + chr1.3:76490494-76490513 None:intergenic 25.0%
!!! TTTTTTTTGGTTGCTATACT+TGG + chr1.3:76490517-76490536 None:intergenic 25.0%
AAAGACAATGTTTGTATTGC+TGG - chr1.3:76487753-76487772 MS.gene74931:intron 30.0%
AAAGGAAATGTTTGTGTTGT+TGG - chr1.3:76491970-76491989 MS.gene74931:intron 30.0%
AAGAAAATGGTATTTCACCT+TGG + chr1.3:76491557-76491576 None:intergenic 30.0%
AAGAAATTGAAACACTAGCT+TGG + chr1.3:76485878-76485897 None:intergenic 30.0%
AATATGCAAGTGAGAGAAAA+TGG - chr1.3:76492145-76492164 MS.gene74931:CDS 30.0%
AATCAATCATTAACTAGGCT+TGG + chr1.3:76488277-76488296 None:intergenic 30.0%
ACAAGTGTTTCAATTTGTGT+AGG - chr1.3:76491091-76491110 MS.gene74931:intron 30.0%
ACACCTTTCAAGAATAACAA+AGG - chr1.3:76491031-76491050 MS.gene74931:intron 30.0%
ACATATTGTTTCAGATTAGC+AGG + chr1.3:76491823-76491842 None:intergenic 30.0%
ACTTAGTTAATCACGACATT+TGG + chr1.3:76486699-76486718 None:intergenic 30.0%
AGAAGAATACAAAAGGATTG+AGG - chr1.3:76492110-76492129 MS.gene74931:CDS 30.0%
AGAATAAACAGAATTGTGGT+AGG + chr1.3:76485907-76485926 None:intergenic 30.0%
AGGAAGAAGAAGAATACAAA+AGG - chr1.3:76492103-76492122 MS.gene74931:CDS 30.0%
AGGTTTGAAGAAATATGCAA+AGG - chr1.3:76487923-76487942 MS.gene74931:intron 30.0%
AGTTTCCCAAAGAAATAGAA+TGG - chr1.3:76488336-76488355 MS.gene74931:intron 30.0%
ATATACCTACCACTAAAGAA+AGG + chr1.3:76490753-76490772 None:intergenic 30.0%
ATCGACATATTCAACTTCAT+GGG - chr1.3:76490076-76490095 MS.gene74931:intron 30.0%
ATTGAGATATAGACATCCTT+GGG - chr1.3:76491924-76491943 MS.gene74931:intron 30.0%
CAATTTATTACTCAACTGCA+TGG - chr1.3:76489317-76489336 MS.gene74931:intron 30.0%
CACTATTAGGTACTTATCAA+AGG - chr1.3:76486031-76486050 MS.gene74931:CDS 30.0%
CATATTGTTTCAGATTAGCA+GGG + chr1.3:76491822-76491841 None:intergenic 30.0%
CATTACTGCATCTTATATTG+TGG - chr1.3:76492182-76492201 MS.gene74931:intron 30.0%
CATTGAGTTTCTATGAGTAT+TGG + chr1.3:76489438-76489457 None:intergenic 30.0%
GAAGAAGATATTGTGATTGT+GGG - chr1.3:76489028-76489047 MS.gene74931:intron 30.0%
GAATAAACAGAATTGTGGTA+GGG + chr1.3:76485906-76485925 None:intergenic 30.0%
GACAATCACTTCTAAGTATA+TGG - chr1.3:76490540-76490559 MS.gene74931:intron 30.0%
GTAAAAAACAGCATTTGGTT+TGG - chr1.3:76489282-76489301 MS.gene74931:intron 30.0%
GTCAATCTTCATTAGGAAAT+TGG - chr1.3:76490719-76490738 MS.gene74931:intron 30.0%
TAACAATATGGGAAAATGCT+TGG - chr1.3:76490013-76490032 MS.gene74931:intron 30.0%
TATTAGGTACTTATCAAAGG+TGG - chr1.3:76486034-76486053 MS.gene74931:CDS 30.0%
TGTAAAACATGTCAAGAAAG+TGG + chr1.3:76491779-76491798 None:intergenic 30.0%
TGTAATGGTCAATCTTCATT+AGG - chr1.3:76490712-76490731 MS.gene74931:intron 30.0%
TGTTAGAAGGAAGTTATTGT+TGG - chr1.3:76491185-76491204 MS.gene74931:intron 30.0%
TTAAGAGATCAATTGACACA+TGG - chr1.3:76487048-76487067 MS.gene74931:intron 30.0%
TTATTTGACAATTGATGGAG+TGG + chr1.3:76490836-76490855 None:intergenic 30.0%
TTGTATTCTTCTTCTTCCTT+TGG + chr1.3:76492102-76492121 None:intergenic 30.0%
! AAGTTCACATTTTATTGTCC+TGG + chr1.3:76488173-76488192 None:intergenic 30.0%
! AGTTCACATTTTATTGTCCT+GGG + chr1.3:76488172-76488191 None:intergenic 30.0%
! ATCCCTCCTAGTTAAAATTT+TGG - chr1.3:76490898-76490917 MS.gene74931:CDS 30.0%
! CGGATTTGCTTTAACAATAT+GGG - chr1.3:76490002-76490021 MS.gene74931:intron 30.0%
! CTATTTCTTTGGGAAACTAT+TGG + chr1.3:76488334-76488353 None:intergenic 30.0%
! CTGTAACCATTCTATTTCTT+TGG + chr1.3:76488345-76488364 None:intergenic 30.0%
! CTTCTTTAGGGATAAAATTC+TGG - chr1.3:76492239-76492258 MS.gene74931:intron 30.0%
! GAAGTGATTAGTTCATTAGT+TGG + chr1.3:76491684-76491703 None:intergenic 30.0%
! GTTTTTATTATAAGTGGAGC+CGG - chr1.3:76486775-76486794 MS.gene74931:intron 30.0%
! TGCTAATCTGAAACAATATG+TGG - chr1.3:76491822-76491841 MS.gene74931:intron 30.0%
! TTGCGGTTTTTCTATTGAAT+TGG + chr1.3:76489238-76489257 None:intergenic 30.0%
!! AATAAATATGCGGTTTGGTT+TGG + chr1.3:76489840-76489859 None:intergenic 30.0%
!! TTTGTTATTCTTGAAAGGTG+TGG + chr1.3:76491032-76491051 None:intergenic 30.0%
!!! AAGAAGTCAGATTTTGATTG+TGG - chr1.3:76492288-76492307 MS.gene74931:intron 30.0%
!!! AGCCAAAATTTTAACTAGGA+GGG + chr1.3:76490903-76490922 None:intergenic 30.0%
!!! CTTTTTTAAGGGCAGATTTT+TGG - chr1.3:76488028-76488047 MS.gene74931:intron 30.0%
!!! GATATAATTTTGGCTTGTAG+TGG - chr1.3:76490349-76490368 MS.gene74931:CDS 30.0%
!!! GTGTTTATTGGTTTTTCACA+TGG - chr1.3:76491520-76491539 MS.gene74931:intron 30.0%
!!! TTTACGATTTTGGTTTGGAT+TGG + chr1.3:76489267-76489286 None:intergenic 30.0%
!!! TTTTAAGCCTTTTTTGAGGT+AGG + chr1.3:76488931-76488950 None:intergenic 30.0%
AAAATACTCCATCTTGCTGA+TGG - chr1.3:76486083-76486102 MS.gene74931:CDS 35.0%
AAACTAACCGGTGAACTAAT+CGG - chr1.3:76487454-76487473 MS.gene74931:intron 35.0%
AAATATCACCAGAACAGAAG+AGG - chr1.3:76490297-76490316 MS.gene74931:CDS 35.0%
AAATGCTAACAAGTGCTCTA+AGG + chr1.3:76488529-76488548 None:intergenic 35.0%
AACCTTTGACATGTACCTAA+TGG + chr1.3:76491241-76491260 None:intergenic 35.0%
AAGAATATAGAGTTGGAGCA+GGG + chr1.3:76491121-76491140 None:intergenic 35.0%
AATATGCAAAGGAGAGAAGA+TGG - chr1.3:76487934-76487953 MS.gene74931:intron 35.0%
AATATGGGAAAATGCTTGGA+AGG - chr1.3:76490017-76490036 MS.gene74931:intron 35.0%
AATGCTAACAAGTGCTCTAA+GGG + chr1.3:76488528-76488547 None:intergenic 35.0%
ACTCTATCCTACCTCAAAAA+AGG - chr1.3:76488921-76488940 MS.gene74931:intron 35.0%
AGGTATGCCTAAATTACGTA+TGG - chr1.3:76488770-76488789 MS.gene74931:intron 35.0%
ATTATTAATTGTTCGCGGTG+CGG + chr1.3:76489907-76489926 None:intergenic 35.0%
ATTGAGATATAGACGTCCTT+GGG - chr1.3:76487707-76487726 MS.gene74931:intron 35.0%
CAAGGATGTCTATATCTCAA+TGG + chr1.3:76491925-76491944 None:intergenic 35.0%
CATCGACATATTCAACTTCA+TGG - chr1.3:76490075-76490094 MS.gene74931:intron 35.0%
CATGAAGTTGAATATGTCGA+TGG + chr1.3:76490077-76490096 None:intergenic 35.0%
CATTGAGATATAGACATCCT+TGG - chr1.3:76491923-76491942 MS.gene74931:intron 35.0%
GATGCTGATAATTGCAGATT+AGG - chr1.3:76489934-76489953 MS.gene74931:intron 35.0%
GATTATCGACCTTTCTTTAG+TGG - chr1.3:76490741-76490760 MS.gene74931:intron 35.0%
GCAATTGAGATCAAACTAAC+CGG - chr1.3:76487442-76487461 MS.gene74931:intron 35.0%
GCACACACAAAAGTTTCTTA+TGG - chr1.3:76486590-76486609 MS.gene74931:CDS 35.0%
GGAAGAAGATATTGTGATTG+TGG - chr1.3:76489027-76489046 MS.gene74931:intron 35.0%
GTAAAACAAATCGAGTGAAG+TGG + chr1.3:76487561-76487580 None:intergenic 35.0%
GTTTGTCATATATTGCGGTT+TGG + chr1.3:76489390-76489409 None:intergenic 35.0%
TACTTATAAATGTGACCGGA+GGG + chr1.3:76486279-76486298 None:intergenic 35.0%
TATTACTCAACTGCATGGTT+TGG - chr1.3:76489322-76489341 MS.gene74931:intron 35.0%
TCAAGAAAATATACTCCCTC+CGG - chr1.3:76486261-76486280 MS.gene74931:CDS 35.0%
TCTTCTTCTACTTCTTCCTT+TGG + chr1.3:76487885-76487904 None:intergenic 35.0%
TGAACTGAATTGAACCAAGT+TGG + chr1.3:76487409-76487428 None:intergenic 35.0%
TGGAACAACAATCAAAACCA+AGG - chr1.3:76486103-76486122 MS.gene74931:CDS 35.0%
TGTGACGACTACTTTGATTA+CGG - chr1.3:76490991-76491010 MS.gene74931:CDS 35.0%
TTACATTAACCCACTTGAGT+TGG - chr1.3:76486141-76486160 MS.gene74931:CDS 35.0%
TTACTTATAAATGTGACCGG+AGG + chr1.3:76486280-76486299 None:intergenic 35.0%
TTCCTTAAACAATGCCCTTA+GGG + chr1.3:76488398-76488417 None:intergenic 35.0%
TTTAGCTAGTGCACATGATT+AGG - chr1.3:76486443-76486462 MS.gene74931:intron 35.0%
TTTCATAACCTGCCTTTATC+CGG + chr1.3:76486797-76486816 None:intergenic 35.0%
TTTCCAATTATAAGCTCCCA+AGG + chr1.3:76487726-76487745 None:intergenic 35.0%
! CTCTTTCAATTGGATTGGAT+CGG - chr1.3:76491614-76491633 MS.gene74931:intron 35.0%
! GCGGATTTGCTTTAACAATA+TGG - chr1.3:76490001-76490020 MS.gene74931:intron 35.0%
! GTGGGTTATATTCAACAAAG+TGG - chr1.3:76492201-76492220 MS.gene74931:intron 35.0%
! TACTTCTTCCTTTGGTTTCT+TGG + chr1.3:76487877-76487896 None:intergenic 35.0%
! TGTTGATGGATCTAAAACGA+GGG + chr1.3:76486821-76486840 None:intergenic 35.0%
! TTCCTTTGGTTTCTTGGAAA+AGG + chr1.3:76487871-76487890 None:intergenic 35.0%
! TTCTTCTTCCTTTGGTTTCT+TGG + chr1.3:76492094-76492113 None:intergenic 35.0%
! TTGTTGATGGATCTAAAACG+AGG + chr1.3:76486822-76486841 None:intergenic 35.0%
!! ATCAAAACCAAGGTGTTGAT+TGG - chr1.3:76491318-76491337 MS.gene74931:intron 35.0%
!! TCAAAACCAAGGTGTTGATT+GGG - chr1.3:76491319-76491338 MS.gene74931:intron 35.0%
!! TCATATATTGCGGTTTGGTT+TGG + chr1.3:76489385-76489404 None:intergenic 35.0%
!! TGGAGTGTTGCTATTTAGTA+TGG - chr1.3:76490261-76490280 MS.gene74931:intron 35.0%
!!! AATCAACACCTTGGTTTTGA+TGG + chr1.3:76491319-76491338 None:intergenic 35.0%
!!! CAGCCAAAATTTTAACTAGG+AGG + chr1.3:76490904-76490923 None:intergenic 35.0%
!!! GATTTTGGTTTGGATTGGTT+CGG + chr1.3:76489262-76489281 None:intergenic 35.0%
!!! TTTTTTGAGGTAGGATAGAG+TGG + chr1.3:76488922-76488941 None:intergenic 35.0%
AAAATGGTTAGGCTTCAAGG+AGG - chr1.3:76487128-76487147 MS.gene74931:intron 40.0%
AAAGTGGTTAGGCTTCAAAG+AGG - chr1.3:76491368-76491387 MS.gene74931:intron 40.0%
AATGTAACACATACTCCCTC+CGG + chr1.3:76486414-76486433 None:intergenic 40.0%
ACAATTGATGGAGTGGAACT+TGG + chr1.3:76490829-76490848 None:intergenic 40.0%
ATCGACCTTTCTTTAGTGGT+AGG - chr1.3:76490745-76490764 MS.gene74931:intron 40.0%
ATGGGATGTGAGTGAACATA+TGG - chr1.3:76488722-76488741 MS.gene74931:intron 40.0%
CAAACCAAACCAAACCATTG+CGG + chr1.3:76489787-76489806 None:intergenic 40.0%
CAAGGACGTCTATATCTCAA+TGG + chr1.3:76487708-76487727 None:intergenic 40.0%
CACCATTAGGTACATGTCAA+AGG - chr1.3:76491236-76491255 MS.gene74931:intron 40.0%
CATTGAGATATAGACGTCCT+TGG - chr1.3:76487706-76487725 MS.gene74931:intron 40.0%
CCAATGTTCATGATATACCC+AGG - chr1.3:76487216-76487235 MS.gene74931:intron 40.0%
CCAATGTTCATGCAGTACTT+TGG - chr1.3:76491456-76491475 MS.gene74931:intron 40.0%
CCTGGGTATATCATGAACAT+TGG + chr1.3:76487219-76487238 None:intergenic 40.0%
CTAACACAACGAACTTCACA+GGG + chr1.3:76485966-76485985 None:intergenic 40.0%
CTTTAACTCTGCATAACCTC+TGG + chr1.3:76491418-76491437 None:intergenic 40.0%
GAACCAATTATGGTCCAACT+TGG - chr1.3:76487392-76487411 MS.gene74931:intron 40.0%
GAAGAATATAGAGTTGGAGC+AGG + chr1.3:76491122-76491141 None:intergenic 40.0%
GAATTCGAGACACTGCTTTA+TGG - chr1.3:76490796-76490815 MS.gene74931:intron 40.0%
GGAGTACATGTGAAAAACCA+TGG + chr1.3:76487346-76487365 None:intergenic 40.0%
GGTATTTCACCTTGGCTAAT+AGG + chr1.3:76491549-76491568 None:intergenic 40.0%
GTGAAAAACCATGGATCAGA+GGG + chr1.3:76487337-76487356 None:intergenic 40.0%
GTGAAGTTCGTTGTGTTAGA+AGG - chr1.3:76485967-76485986 MS.gene74931:CDS 40.0%
GTGACGACTACTTTGATTAC+GGG - chr1.3:76490992-76491011 MS.gene74931:CDS 40.0%
GTGATGACAAGTGTGCTTAT+TGG - chr1.3:76487268-76487287 MS.gene74931:intron 40.0%
GTGCACTAGCTAAATGCAAT+AGG + chr1.3:76486437-76486456 None:intergenic 40.0%
GTTCCTTAAACAATGCCCTT+AGG + chr1.3:76488399-76488418 None:intergenic 40.0%
TAAACACTCCTCTCATCACA+TGG + chr1.3:76491507-76491526 None:intergenic 40.0%
TAACCCACCTTAATTGACAC+CGG + chr1.3:76486230-76486249 None:intergenic 40.0%
TAAGCACACTTGTCATCACA+TGG + chr1.3:76487267-76487286 None:intergenic 40.0%
TACAAAACTCTCCACGTAAG+AGG + chr1.3:76487154-76487173 None:intergenic 40.0%
TCTAACACAACGAACTTCAC+AGG + chr1.3:76485967-76485986 None:intergenic 40.0%
TCTATGGTGGCAAAATGGTT+AGG - chr1.3:76487117-76487136 MS.gene74931:CDS 40.0%
TCTTCAACAGTTGAACAGCT+AGG + chr1.3:76492272-76492291 None:intergenic 40.0%
TGAAAAACCATGGATCAGAG+GGG + chr1.3:76487336-76487355 None:intergenic 40.0%
TGAACTCTATGGTGGCAAAA+TGG - chr1.3:76487112-76487131 MS.gene74931:CDS 40.0%
TGACGACTACTTTGATTACG+GGG - chr1.3:76490993-76491012 MS.gene74931:CDS 40.0%
TGGAACAACCATCAAAACCA+AGG - chr1.3:76491308-76491327 MS.gene74931:intron 40.0%
TGTGAAAAACCATGGATCAG+AGG + chr1.3:76487338-76487357 None:intergenic 40.0%
TTATAAGTGGAGCCGGATAA+AGG - chr1.3:76486782-76486801 MS.gene74931:intron 40.0%
TTCATGATATACCCAGGCAA+AGG - chr1.3:76487222-76487241 MS.gene74931:intron 40.0%
TTCATGCAGTACTTTGGCAA+AGG - chr1.3:76491462-76491481 MS.gene74931:intron 40.0%
TTGGCCTAGTGGTATTAGTT+TGG - chr1.3:76486160-76486179 MS.gene74931:CDS 40.0%
TTGTATTCACCTTGCTTGCT+AGG + chr1.3:76487312-76487331 None:intergenic 40.0%
! AAGTACCTAATAGTGCCACT+TGG + chr1.3:76486026-76486045 None:intergenic 40.0%
! ACGATAACCGATTAGTTCAC+CGG + chr1.3:76487464-76487483 None:intergenic 40.0%
! AGAGTGGAGAAACTTGCTTT+AGG + chr1.3:76488906-76488925 None:intergenic 40.0%
! ATTCTCACCGGTGTCAATTA+AGG - chr1.3:76486220-76486239 MS.gene74931:CDS 40.0%
! GAACCAAGTTGGACCATAAT+TGG + chr1.3:76487398-76487417 None:intergenic 40.0%
! GGAGAAACTTGCTTTAGGTA+AGG + chr1.3:76488901-76488920 None:intergenic 40.0%
! GGCATTTTCCAAGAAACCAA+AGG - chr1.3:76487866-76487885 MS.gene74931:intron 40.0%
! GTCAAAGGTTGTTGCTATTC+AGG - chr1.3:76491251-76491270 MS.gene74931:intron 40.0%
! GTGGTTGCTATTCAAGAATC+TGG - chr1.3:76486053-76486072 MS.gene74931:CDS 40.0%
! GTTGTTGCTATTCAGGAATC+TGG - chr1.3:76491258-76491277 MS.gene74931:intron 40.0%
! TCGAATAGTTTGCGAGTAAG+CGG - chr1.3:76489982-76490001 MS.gene74931:intron 40.0%
! TGGCCTAGTGGTATTAGTTT+GGG - chr1.3:76486161-76486180 MS.gene74931:CDS 40.0%
! TTGTTGTTCCATCAGCAAGA+TGG + chr1.3:76486094-76486113 None:intergenic 40.0%
!! AAGGTATTGATTGGGTGTGA+TGG - chr1.3:76487087-76487106 MS.gene74931:CDS 40.0%
!! ACGTGGAGAGTTTTGTAACT+AGG - chr1.3:76487157-76487176 MS.gene74931:intron 40.0%
!! ATATGCGGTTTGGTTTGGTT+CGG + chr1.3:76489835-76489854 None:intergenic 40.0%
!! CCAAAGTACTGCATGAACAT+TGG + chr1.3:76491459-76491478 None:intergenic 40.0%
!! CGTGGAGAGTTTTGTAACTA+GGG - chr1.3:76487158-76487177 MS.gene74931:intron 40.0%
!! GATGTTTTTATGCCATGCAG+TGG - chr1.3:76485936-76485955 MS.gene74931:CDS 40.0%
!! GTGATGAGAGGAGTGTTTAT+TGG - chr1.3:76491508-76491527 MS.gene74931:intron 40.0%
!! GTGGAGAGTTTTGTAACTAG+GGG - chr1.3:76487159-76487178 MS.gene74931:intron 40.0%
!! TATTGCGGTTTGGTTTGGTT+TGG + chr1.3:76489380-76489399 None:intergenic 40.0%
!! TGGTTTGGTTTGGTTTGGTT+CGG - chr1.3:76489790-76489809 MS.gene74931:intron 40.0%
!! TTGGCTTGTAGTGGAAATCA+TGG - chr1.3:76490358-76490377 MS.gene74931:CDS 40.0%
!! TTGGTTTGGTTTGGTTAGGT+TGG + chr1.3:76489371-76489390 None:intergenic 40.0%
!!! TTGGCAAAGGTTTTAGAGCT+GGG - chr1.3:76491475-76491494 MS.gene74931:intron 40.0%
!!! TTTGGCAAAGGTTTTAGAGC+TGG - chr1.3:76491474-76491493 MS.gene74931:intron 40.0%
ACACAACGAACTTCACTGCT+TGG + chr1.3:76491168-76491187 None:intergenic 45.0%
ACATCCTTGGGAGCTTATGA+TGG - chr1.3:76491936-76491955 MS.gene74931:intron 45.0%
ACATGGACTCCTATTAGCCA+AGG - chr1.3:76491537-76491556 MS.gene74931:intron 45.0%
AGCTTCCAAGTGGCACTATT+AGG - chr1.3:76486018-76486037 MS.gene74931:CDS 45.0%
AGTGTCTCGAATTCGACCTA+TGG + chr1.3:76490790-76490809 None:intergenic 45.0%
ATACAAACCCCTCTGATCCA+TGG - chr1.3:76487326-76487345 MS.gene74931:intron 45.0%
ATCACACCCAATCAACACCT+TGG + chr1.3:76491328-76491347 None:intergenic 45.0%
ATGACACCTGATCTTGGTCA+AGG - chr1.3:76492009-76492028 MS.gene74931:CDS 45.0%
ATGGCACCTTATATCGCACA+AGG - chr1.3:76487792-76487811 MS.gene74931:intron 45.0%
CAAACCAAACCATTGCGGTT+TGG + chr1.3:76489782-76489801 None:intergenic 45.0%
CAACATCTTTGGCACTTCAC+AGG - chr1.3:76489071-76489090 MS.gene74931:CDS 45.0%
CAATCCAAACCGCAATGGTT+TGG - chr1.3:76489775-76489794 MS.gene74931:intron 45.0%
CACCTTGAAAACCTTTGCCT+GGG + chr1.3:76487236-76487255 None:intergenic 45.0%
CATCCTTGGGAGCTTATGAT+GGG - chr1.3:76491937-76491956 MS.gene74931:intron 45.0%
CGACACGCCATACGTAATTT+AGG + chr1.3:76488780-76488799 None:intergenic 45.0%
CGTCCTTGGGAGCTTATAAT+TGG - chr1.3:76487720-76487739 MS.gene74931:intron 45.0%
CTTACCAATGAGCTTCCAAG+TGG - chr1.3:76486008-76486027 MS.gene74931:CDS 45.0%
CTTGCTAACAAGTGCCCTAA+GGG - chr1.3:76488381-76488400 MS.gene74931:intron 45.0%
GATATTGTGATTGTGGGAGC+TGG - chr1.3:76489034-76489053 MS.gene74931:intron 45.0%
GGCAAAATGGTTAGGCTTCA+AGG - chr1.3:76487125-76487144 MS.gene74931:CDS 45.0%
GGTCCCAAACTAATACCACT+AGG + chr1.3:76486167-76486186 None:intergenic 45.0%
GTTGAATATGTCGATGGCGA+AGG + chr1.3:76490071-76490090 None:intergenic 45.0%
GTTGTCTTCAACCCTTCCTT+AGG - chr1.3:76486467-76486486 MS.gene74931:intron 45.0%
TAAACTCTGTGGTGGCAAAG+TGG - chr1.3:76491352-76491371 MS.gene74931:intron 45.0%
TAGGGGTTATGCAGAGTTGA+AGG - chr1.3:76487176-76487195 MS.gene74931:intron 45.0%
TATCACCAGAACAGAAGAGG+CGG - chr1.3:76490300-76490319 MS.gene74931:CDS 45.0%
TCAAAGAGGCCTCTAACACA+GGG - chr1.3:76491382-76491401 MS.gene74931:intron 45.0%
TCAACCCTTCCTTAGGAAGT+GGG - chr1.3:76486474-76486493 MS.gene74931:intron 45.0%
TCCAACACCAACAACATCCA+AGG + chr1.3:76490043-76490062 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTA+AGG - chr1.3:76488380-76488399 MS.gene74931:intron 45.0%
TCTTGGAAAATGCCTCACCT+AGG + chr1.3:76487860-76487879 None:intergenic 45.0%
TCTTTGGTCGTCGTAACGTA+AGG - chr1.3:76490572-76490591 MS.gene74931:intron 45.0%
TGACACCTGATCTTGGTCAA+GGG - chr1.3:76492010-76492029 MS.gene74931:CDS 45.0%
TGATGGAGTAAACTCTGTGG+TGG - chr1.3:76491344-76491363 MS.gene74931:intron 45.0%
TGATGGAGTGAACTCTATGG+TGG - chr1.3:76487104-76487123 MS.gene74931:CDS 45.0%
TGCATATCTCCCTGTGTTAG+AGG + chr1.3:76491394-76491413 None:intergenic 45.0%
TGGCACCTTATATCGCACAA+GGG - chr1.3:76487793-76487812 MS.gene74931:intron 45.0%
TGGTTTCTTGGAAAAGGCCT+CGG + chr1.3:76492082-76492101 None:intergenic 45.0%
TGTACTTCTCCTAGCAAGCA+AGG - chr1.3:76487300-76487319 MS.gene74931:intron 45.0%
TTCAAAGAGGCCTCTAACAC+AGG - chr1.3:76491381-76491400 MS.gene74931:intron 45.0%
TTCAACCCTTCCTTAGGAAG+TGG - chr1.3:76486473-76486492 MS.gene74931:intron 45.0%
TTTCCCATCATAAGCTCCCA+AGG + chr1.3:76491943-76491962 None:intergenic 45.0%
! AGTGGTATTAGTTTGGGACC+TGG - chr1.3:76486167-76486186 MS.gene74931:CDS 45.0%
! CAAACCATTGCGGTTTGGAT+TGG + chr1.3:76489777-76489796 None:intergenic 45.0%
! CATTGCGGTTTGGATTGGAT+CGG + chr1.3:76489772-76489791 None:intergenic 45.0%
! GACCAAGATCAGGTGTCATA+GGG + chr1.3:76492008-76492027 None:intergenic 45.0%
! GGCCTTTTCCAAGAAACCAA+AGG - chr1.3:76492083-76492102 MS.gene74931:CDS 45.0%
! GTGCGATATAAGGTGCCATA+GGG + chr1.3:76487791-76487810 None:intergenic 45.0%
! GTGGTATTAGTTTGGGACCT+GGG - chr1.3:76486168-76486187 MS.gene74931:CDS 45.0%
! GTGTGATGGAGTAAACTCTG+TGG - chr1.3:76491341-76491360 MS.gene74931:intron 45.0%
! GTGTGATGGAGTGAACTCTA+TGG - chr1.3:76487101-76487120 MS.gene74931:CDS 45.0%
! GTTGCTTTGATCATCTTCCC+AGG - chr1.3:76488152-76488171 MS.gene74931:CDS 45.0%
! GTTTTTATGCCATGCAGTGG+AGG - chr1.3:76485939-76485958 MS.gene74931:CDS 45.0%
! TACCCAGGCAAAGGTTTTCA+AGG - chr1.3:76487231-76487250 MS.gene74931:intron 45.0%
! TCACCGGTGTCAATTAAGGT+GGG - chr1.3:76486224-76486243 MS.gene74931:CDS 45.0%
! TGACCAAGATCAGGTGTCAT+AGG + chr1.3:76492009-76492028 None:intergenic 45.0%
! TGCTGGTCTCACAACATCTT+TGG - chr1.3:76489060-76489079 MS.gene74931:CDS 45.0%
! TGTGCGATATAAGGTGCCAT+AGG + chr1.3:76487792-76487811 None:intergenic 45.0%
!! AAGGTGTTGATTGGGTGTGA+TGG - chr1.3:76491327-76491346 MS.gene74931:intron 45.0%
!! ATGTACCTAATGGTGCCACT+AGG + chr1.3:76491231-76491250 None:intergenic 45.0%
!! CAAACCGCAATGGTTTGGTT+TGG - chr1.3:76489780-76489799 MS.gene74931:intron 45.0%
!! CATTGGTTCAAGCTTGTGAG+TGG + chr1.3:76491442-76491461 None:intergenic 45.0%
!! CGCAATGGTTTGGTTTGGTT+TGG - chr1.3:76489785-76489804 MS.gene74931:intron 45.0%
!! CGGTTTGGTTTGGTTTGGTT+AGG + chr1.3:76489375-76489394 None:intergenic 45.0%
!! CTCAACTGCATGGTTTGGTT+CGG - chr1.3:76489327-76489346 MS.gene74931:intron 45.0%
!! GGTGTTGTGCTTTAGAGGAT+GGG - chr1.3:76487817-76487836 MS.gene74931:intron 45.0%
!! GTGTGTTGCTACTTGCTATG+CGG - chr1.3:76486719-76486738 MS.gene74931:CDS 45.0%
!! GTGTTGTGCTTTAGAGGATG+GGG - chr1.3:76487818-76487837 MS.gene74931:intron 45.0%
!! GTTTGGATTGGTTCGGTTTG+CGG + chr1.3:76489255-76489274 None:intergenic 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG - chr1.3:76488393-76488412 MS.gene74931:intron 45.0%
!!! TGGCAAAGGTTTTAGAGCTG+GGG - chr1.3:76491476-76491495 MS.gene74931:intron 45.0%
!! TAACTATTTAAATTAATATA+TGG + chr1.3:76488994-76489013 None:intergenic 5.0%
!! TATATTAATTTAAATAGTTA+TGG - chr1.3:76488994-76489013 MS.gene74931:intron 5.0%
!!! AATTTTTTTTTAAACTTTTT+AGG + chr1.3:76487367-76487386 None:intergenic 5.0%
ACACCTGATCTTGGTCAAGG+GGG - chr1.3:76492012-76492031 MS.gene74931:CDS 50.0%
ACAGGGAGATATGCAACCAG+AGG - chr1.3:76491399-76491418 MS.gene74931:intron 50.0%
ACCACTAGGCCAACTCAAGT+GGG + chr1.3:76486153-76486172 None:intergenic 50.0%
AGCTTCCTAGTGGCACCATT+AGG - chr1.3:76491223-76491242 MS.gene74931:intron 50.0%
ATCACTCTCCCCACTTCCTA+AGG + chr1.3:76486486-76486505 None:intergenic 50.0%
ATTGTGGGAGCTGGAATTGC+TGG - chr1.3:76489043-76489062 MS.gene74931:CDS 50.0%
CAACCCTTCCTTAGGAAGTG+GGG - chr1.3:76486475-76486494 MS.gene74931:intron 50.0%
CACCCTATGACACCTGATCT+TGG - chr1.3:76492003-76492022 MS.gene74931:intron 50.0%
CACCTTATATCGCACAAGGG+GGG - chr1.3:76487796-76487815 MS.gene74931:intron 50.0%
CCACCTTGAAAACCTTTGCC+TGG + chr1.3:76487237-76487256 None:intergenic 50.0%
CGATCCAATCCAAACCGCAA+TGG - chr1.3:76489770-76489789 MS.gene74931:intron 50.0%
CTTGCCAATGAGCTTCCTAG+TGG - chr1.3:76491213-76491232 MS.gene74931:intron 50.0%
GACACCTGATCTTGGTCAAG+GGG - chr1.3:76492011-76492030 MS.gene74931:CDS 50.0%
GCACCTTATATCGCACAAGG+GGG - chr1.3:76487795-76487814 MS.gene74931:intron 50.0%
GCCTTGGATGTTGTTGGTGT+TGG - chr1.3:76490039-76490058 MS.gene74931:intron 50.0%
GGAAAATGCTTGGAAGGCCT+TGG - chr1.3:76490023-76490042 MS.gene74931:intron 50.0%
GGCACCTTATATCGCACAAG+GGG - chr1.3:76487794-76487813 MS.gene74931:intron 50.0%
GTCTCAGGTTCGATTCTCAC+CGG - chr1.3:76486208-76486227 MS.gene74931:CDS 50.0%
TAATTGTTCGCGGTGCGGTT+TGG + chr1.3:76489902-76489921 None:intergenic 50.0%
TACCACTAGGCCAACTCAAG+TGG + chr1.3:76486154-76486173 None:intergenic 50.0%
TCTCCCCACTTCCTAAGGAA+GGG + chr1.3:76486481-76486500 None:intergenic 50.0%
TCTGTGGTGGCAAAGTGGTT+AGG - chr1.3:76491357-76491376 MS.gene74931:intron 50.0%
TGGAAGGCCTTGGATGTTGT+TGG - chr1.3:76490033-76490052 MS.gene74931:intron 50.0%
TGGAGATGCTTTGCACCCTA+TGG - chr1.3:76487773-76487792 MS.gene74931:intron 50.0%
TGTAACCGCCTCTTCTGTTC+TGG + chr1.3:76490308-76490327 None:intergenic 50.0%
! CTCACCGGTGTCAATTAAGG+TGG - chr1.3:76486223-76486242 MS.gene74931:CDS 50.0%
! TTTAGCAAGGTGCCTAGGTG+AGG - chr1.3:76487845-76487864 MS.gene74931:intron 50.0%
! TTTAGCAAGGTGCTTAGCCG+AGG - chr1.3:76492062-76492081 MS.gene74931:CDS 50.0%
!! AGTGCCACTTGGAAGCTCAT+TGG + chr1.3:76486015-76486034 None:intergenic 50.0%
!! CCAGGCAAAGGTTTTCAAGG+TGG - chr1.3:76487234-76487253 MS.gene74931:intron 50.0%
!! GCATGGTTTGGTTCGGTTTG+CGG - chr1.3:76489334-76489353 MS.gene74931:intron 50.0%
!! GGGTGTTGTGCTTTAGAGGA+TGG - chr1.3:76487816-76487835 MS.gene74931:intron 50.0%
!! TGTTGCTACTTGCTATGCGG+TGG - chr1.3:76486722-76486741 MS.gene74931:CDS 50.0%
!! TTGTGCTTTAGAGGATGGGG+TGG - chr1.3:76487821-76487840 MS.gene74931:intron 50.0%
!!! AGGATGGGGTGGTTTTAGCA+AGG - chr1.3:76487832-76487851 MS.gene74931:intron 50.0%
!!! GTGGTTTTAGCAAGGTGCCT+AGG - chr1.3:76487840-76487859 MS.gene74931:intron 50.0%
!!! TGCGGTTTGGTTCGGTTTTG+AGG + chr1.3:76489889-76489908 None:intergenic 50.0%
AAGTGGAGCCGGATAAAGGC+AGG - chr1.3:76486786-76486805 MS.gene74931:intron 55.0%
CACCCCCCTTGTGCGATATA+AGG + chr1.3:76487801-76487820 None:intergenic 55.0%
CACCTGATCTTGGTCAAGGG+GGG - chr1.3:76492013-76492032 MS.gene74931:CDS 55.0%
CTCTCCCCACTTCCTAAGGA+AGG + chr1.3:76486482-76486501 None:intergenic 55.0%
CTTCAAGGAGGCCTCTTACG+TGG - chr1.3:76487140-76487159 MS.gene74931:intron 55.0%
GAATCGAACCTGAGACCTCG+AGG + chr1.3:76486204-76486223 None:intergenic 55.0%
GGGCTCTTCCATGTGATGAG+AGG - chr1.3:76491496-76491515 MS.gene74931:intron 55.0%
! GCGGTTTGGATTGGATCGGT+TGG + chr1.3:76489768-76489787 None:intergenic 55.0%
!! ACCCACTTGAGTTGGCCTAG+TGG - chr1.3:76486149-76486168 MS.gene74931:CDS 55.0%
!! AGGGGGGTGTTGTGCTTTAG+AGG - chr1.3:76487812-76487831 MS.gene74931:intron 55.0%
!! GGTGCCACTAGGAAGCTCAT+TGG + chr1.3:76491220-76491239 None:intergenic 55.0%
CACCCCCCTTGACCAAGATC+AGG + chr1.3:76492018-76492037 None:intergenic 60.0%
TCACAGGGTCCTCCACTGCA+TGG + chr1.3:76485951-76485970 None:intergenic 60.0%
TCGAACCTGAGACCTCGAGG+AGG + chr1.3:76486201-76486220 None:intergenic 60.0%
!! GTTCGCGGTGCGGTTTGGTT+CGG + chr1.3:76489897-76489916 None:intergenic 60.0%
CTGGGATGTGCTCCTCCTCG+AGG - chr1.3:76486186-76486205 MS.gene74931:CDS 65.0%
GTGCTCCTCCTCGAGGTCTC+AGG - chr1.3:76486193-76486212 MS.gene74931:CDS 65.0%
! CTCGAGGAGGAGCACATCCC+AGG + chr1.3:76486188-76486207 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 76485809 76492323 76485809 ID=MS.gene74931
chr1.3 mRNA 76485809 76492323 76485809 ID=MS.gene74931.t1;Parent=MS.gene74931
chr1.3 exon 76492304 76492323 76492304 ID=MS.gene74931.t1.exon1;Parent=MS.gene74931.t1
chr1.3 CDS 76492304 76492323 76492304 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76492008 76492176 76492008 ID=MS.gene74931.t1.exon2;Parent=MS.gene74931.t1
chr1.3 CDS 76492008 76492176 76492008 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76490811 76491042 76490811 ID=MS.gene74931.t1.exon3;Parent=MS.gene74931.t1
chr1.3 CDS 76490811 76491042 76490811 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76490271 76490549 76490271 ID=MS.gene74931.t1.exon4;Parent=MS.gene74931.t1
chr1.3 CDS 76490271 76490549 76490271 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76489040 76489121 76489040 ID=MS.gene74931.t1.exon5;Parent=MS.gene74931.t1
chr1.3 CDS 76489040 76489121 76489040 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76488035 76488181 76488035 ID=MS.gene74931.t1.exon6;Parent=MS.gene74931.t1
chr1.3 CDS 76488035 76488181 76488035 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76487073 76487144 76487073 ID=MS.gene74931.t1.exon7;Parent=MS.gene74931.t1
chr1.3 CDS 76487073 76487144 76487073 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76486803 76486959 76486803 ID=MS.gene74931.t1.exon8;Parent=MS.gene74931.t1
chr1.3 CDS 76486803 76486959 76486803 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76486574 76486760 76486574 ID=MS.gene74931.t1.exon9;Parent=MS.gene74931.t1
chr1.3 CDS 76486574 76486760 76486574 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
chr1.3 exon 76485809 76486332 76485809 ID=MS.gene74931.t1.exon10;Parent=MS.gene74931.t1
chr1.3 CDS 76485809 76486332 76485809 ID=cds.MS.gene74931.t1;Parent=MS.gene74931.t1
Gene Sequence

>MS.gene74931

ATGGACAACAAAGGAAAACAGTAAGTGCACTGAACATATTATATAGTCTTAACATTGACACATACTCCAAGCTAGTGTTTCAATTTCTTTCATACCCTACCACAATTCTGTTTATTCTTCTTGCTATGATGTTTTTATGCCATGCAGTGGAGGACCCTGTGAAGTTCGTTGTGTTAGAAGAAAGTTATTGTTGGAAGTTCTTACCAATGAGCTTCCAAGTGGCACTATTAGGTACTTATCAAAGGTGGTTGCTATTCAAGAATCTGGCTTCTCTAAAATACTCCATCTTGCTGATGGAACAACAATCAAAACCAAGGTAAACAATATATGTGTTACATTAACCCACTTGAGTTGGCCTAGTGGTATTAGTTTGGGACCTGGGATGTGCTCCTCCTCGAGGTCTCAGGTTCGATTCTCACCGGTGTCAATTAAGGTGGGTTAATTTAACTTCTTCAAGAAAATATACTCCCTCCGGTCACATTTATAAGTAAAAAACAACTTTTTAGGTACATTCAATAATTAATGTATCTAACTCATAAATATGACCGGATATATTAATTATTCAATGTATCTAAAAAGTCATTTTTTATTTATAAATATGACCGGAGGGAGTATGTGTTACATTCCTATTGCATTTAGCTAGTGCACATGATTAGGTGTTGTCTTCAACCCTTCCTTAGGAAGTGGGGAGAGTGATTACTAATGATACTGAGCTAGATGAATTTTAATCAATTGATTTGCTTATAATTAAAAAGTGTGACATAACATATAAAATAGATAGGCACACACAAAAGTTTCTTATGGTCACAAGTATCATACCGTTCATATTTTCAACTATGTAAATCAAATTTATAGAGAAACTCAAATATGAGCTATTTAATCTTCATCCAAATGTCGTGATTAACTAAGTGTGTGTTGCTACTTGCTATGCGGTGGCACTAACTGATTGTGAATTAATTGATTTTAGTTTTTATTATAAGTGGAGCCGGATAAAGGCAGGTTATGAAAACCCTCGTTTTAGATCCATCAACAAAATGTTATTTTTTATTAGATTTTATAAACAAAAAGATTTCATATACAGACAAAAAAGGTCTTATATGCCATGATTATGAGTAGAAATTGAAAAATACTCACACACATTGCGCACTTAGCAAATTTGTGATAGACTCATCTAATTTTAACTGTGTTGTGGTGACTTAAGCTAGAAAAAAAAGAAAATAAAAAATAGAATATACTGTTTTAAGAGATCAATTGACACATGGTAATTTGAAAATTTGAAAGGTATTGATTGGGTGTGATGGAGTGAACTCTATGGTGGCAAAATGGTTAGGCTTCAAGGAGGCCTCTTACGTGGAGAGTTTTGTAACTAGGGGTTATGCAGAGTTGAAGGACACTCACGAACTTGAGCCAATGTTCATGATATACCCAGGCAAAGGTTTTCAAGGTGGAGCTGTTCCATGTGATGACAAGTGTGCTTATTGGTTTTTCGCATGTACTTCTCCTAGCAAGCAAGGTGAATACAAACCCCTCTGATCCATGGTTTTTCACATGTACTCCTAAAAAGTTTAAAAAAAAATTCAAATGAACCAATTATGGTCCAACTTGGTTCAATTCAGTTCAATCAAACTGTAGTGCAATTGAGATCAAACTAACCGGTGAACTAATCGGTTATCGTATCAACCATTTGAATTGAACAATTTAGTATAATTTTTAAATCATTGGTTTCAACTTTGAAAATGAAATAAGTTTCCACTTCACTCGATTTGTTTTACAGATAAAGAGCTAGCACAAGATCCTGCTAAACTAAAACAATATGTGTTAAGCAAGCTAGAGAAGATTCCAAGTTATGTTAGATCTATCATAGAAAATACTGATTTAGATGCTTTACATTCAGCTCCATTGAGATATAGACGTCCTTGGGAGCTTATAATTGGAAATATTAGTAAAGACAATGTTTGTATTGCTGGAGATGCTTTGCACCCTATGGCACCTTATATCGCACAAGGGGGGTGTTGTGCTTTAGAGGATGGGGTGGTTTTAGCAAGGTGCCTAGGTGAGGCATTTTCCAAGAAACCAAAGGAAGAAGTAGAAGAAGAATATAAAAGGATTGAAGAAGGTTTGAAGAAATATGCAAAGGAGAGAAGATGGAGATGCGTTGATCTAATTACTACAAGTTATATTGTGGGTTTTATTAATGAAAATGGTTCAAAATTTGTTAACTTTTTTAAGGGCAGATTTTTGGCTACATTCTTTGCTGCTCTGCCGTTGAAGAAGTCAAATTTTGATTGTGGACAATTAAAATAGCTTTATAAATAGTGACACAATTGTCTTCAATTAATCGTTGTTGCTTTGATCATCTTCCCAGGACAATAAAATGTGAACTTTTGTTCGTTACAATAATATATAACCAAGTATGATTTTATGTTGATTAGAGAATTCAACAAGTATAATAATGTAATCTTAGTCCAAGCCTAGTTAATGATTGATTTAATGAAAAAACTTAACAAGTATAATAATGTAATCCAATAGTTTCCCAAAGAAATAGAATGGTTACAGTAATAAAAACAAGCGTCTTGCTAACAAGTGCCCTAAGGGCATTGTTTAAGGAACCAAAAAAAAGAAACTATGTCTTGAAAATACAAGTCAAACACTTTTTAAAGTCATGTGTGTACAATTTTCAATGCAAAAATTGCTACTTTTAGATGCTTAAACAATGCCCTTAGAGCACTTGTTAGCATTTTCCTAAAAACAAATGGTTAAAAAAAAAACAATCTAAGGATTTTTTTAGAGGAAAAAAAAATCCATTGATTGTTTTTTTTGTTGAGCAAAAATCCAATGATTGTTATCTTATGAATAAATGTGCCTAATTAAAAAAAGAATAAATGTGGCAATTTTGCAAAAGATATCTAATGAATGGGATGTGAGTGAACATATGGAACTCAAATTCAATTTTGCAAGCTAAGGTATGCCTAAATTACGTATGGCGTGTCGTCATGAGATTAAATTATAGCTCGGGACAGTAACGATGCATTATCTCTTACCCAACTATATATATAAACTTCTTGTAGTGTTGTTCTTTGAAGCATTATCCTTACCTAAAGCAAGTTTCTCCACTCTATCCTACCTCAAAAAAGGCTTAAAATATACTAGTATACTAGAAATATTTAATTAGCACCCAAAAACCATATATTAATTTAAATAGTTATGGAAAGTGTAATGGAAGAAGATATTGTGATTGTGGGAGCTGGAATTGCTGGTCTCACAACATCTTTGGCACTTCACAGGTACCCTCTTTCACTTATTTTTATCACCTTTTACTGATCTGTCTAAATAAAATAGTATATTGTTTTTTGGGATGAAAAATATAGTATATTGTTAATGTAATTAAGATAGTATATACAACAATTAGGGGTGTTCAAAACCGAACCAATTCAATAGAAAAACCGCAAACCGAACCAATCCAAACCAAAATCGTAAAAAACAGCATTTGGTTTGGATGTATTCAGATCAATTTATTACTCAACTGCATGGTTTGGTTCGGTTTGCGGTTTTGATTTTACCAACCTAACCAAACCAAACCAAACCGCAATATATGACAAACACAAATTAAATATATATCACTTGGACCAATACTCATAGAAACTCAATGAAAACTTTAATAAAATGACTTTTTTTTTCTTGTTAAGTTTCTTTACTTTTTCTTTCAAAAATGTATTTATGTACTACTTGAACTCTTAGAGAATGATTAAAAAAAATTGTATTTTGTATTTCTTACAAAATAGGATTATTTGTCCGCATTTAAATTTAGTCTACGTAGTTAAGAACATTGTTTGATGAAAATAAAATGTTAATGTTGGATGAAATTTAAAACATTGCTGAAAATATGTCATGTTTTAACTTTTTAATTTGATTTTAATGTTGGAAACAAAAAAAAATTATTGTCTAAAAAAATCGCGCCAACCGATCCAATCCAAACCGCAATGGTTTGGTTTGGTTTGGTTCGGATTTTATTTTAAAAGTCAACCGAACCAAACCAAACCGCATATTTATTTATCTTGCAGTTCGGATGACTTTTAACCTCAAAACCGAACCAAACCGCACCGCGAACAATTAATAATAGATAATGATGCTGATAATTGCAGATTAGGTGTTGAAAGTTTAGTATTAGAATCTTCGAATAGTTTGCGAGTAAGCGGATTTGCTTTAACAATATGGGAAAATGCTTGGAAGGCCTTGGATGTTGTTGGTGTTGGAGATATCCTTCGCCATCGACATATTCAACTTCATGGGTGAGTACAAAATAATATTGTTAGACAATAATTTATAATTTTGTTATTTACATATGGTGTTGATACAATTTTATTTTTGTATTAGTTTTTTTCCTCTCTCTAAATAAAATTAATATCAATAAATTTTTTATAATATCAAATACATTGTTAACTTTTAGATTTTTGGAGTGTTGCTATTTAGTATGGTGACAAAAACAACAAATATCACCAGAACAGAAGAGGCGGTTACAATTTTTATTTCACACTAAAATGATATAATTTTGGCTTGTAGTGGAAATCATGGACAATGTATAGTGTTATTTGTTGGTTTTCGTTTGTCATGCTTCGTACAAAGAGTGTTTCTCATTCAAATAATATCCATCAAGTAAATTAATTTTGACATTTTATACGATGCCAACTTTTAGAATCAACACAAACCAAGTATAGCAACCAAAAAAAATTAGACAATCACTTCTAAGTATATGGTATTTGTTTTCTTTGGTCGTCGTAACGTAAGGATGTCATTTAAAGTTTCTTTTTATGATATGTGATATAGAGTATTCTTTGAAGTATGAACACAATTGTCGTCGAATAATTTTGTTAACCATACTATTAATGTGAAATATTGTTCACTTTGTAATGGTCAATCTTCATTAGGAAATTGGATTATCGACCTTTCTTTAGTGGTAGGTATATACATTTTTGCATTTCCATAGGTCGAATTCGAGACACTGCTTTATGGATACGAACCAAGTTCCACTCCATCAATTGTCAAATAATCACTACAAGCAAGAAAAAATAAATACAATTTGGGACGGAAAATCCCTCCTAGTTAAAATTTTGGCTGAAATAAGAGCAAAACAAAAATATTTATCAATTGTGATATTCTAAAAACTTGATTTGGAAATTAGGAATGTGACGACTACTTTGATTACGGGGCAACAAACATCAACCACACCTTTCAAGAATAACAAAGGAAAACAGTAAGTGTATTGTGTAACATTCACATCAACTACAAGTGTTTCAATTTGTGTAGGCATACCCTGCTCCAACTCTATATTCTTCTTATTGTGTGTTTTTAATTTGTGCCAAGCAGTGAAGTTCGTTGTGTTAGAAGGAAGTTATTGTTGGAAGCACTTGCCAATGAGCTTCCTAGTGGCACCATTAGGTACATGTCAAAGGTTGTTGCTATTCAGGAATCTGGCTTCTCTAAAATATTACATCTTGTTGATGGAACAACCATCAAAACCAAGGTGTTGATTGGGTGTGATGGAGTAAACTCTGTGGTGGCAAAGTGGTTAGGCTTCAAAGAGGCCTCTAACACAGGGAGATATGCAACCAGAGGTTATGCAGAGTTAAAGACCACTCACAAGCTTGAACCAATGTTCATGCAGTACTTTGGCAAAGGTTTTAGAGCTGGGGCTCTTCCATGTGATGAGAGGAGTGTTTATTGGTTTTTCACATGGACTCCTATTAGCCAAGGTGAAATACCATTTTCTTCCCATTTTTCTTTTGCATATTCATATTAAATTTTTTTCTCTTTCAATTGGATTGGATCGGAGATCAAACTAGTTCGACCAAATTGTAGTACAATTATGATCAAACCAACTAATGAACTAATCACTTCTCGATTCAACCAATTGACCGATTAGTAAATTTTTTAGAATATTGGTTTCAACGCAAAAAATGAAATAATAGTCCACTTTCTTGACATGTTTTACAGATAAAGAGCTAACACGAGACCCTGCTAATCTGAAACAATATGTGGTAAGCAAACTAGACAAGATGTCGAGCGATGTTAGATATTTCATAGAAAACACAGAATTAGATGCATTTCAATCAGCTCCATTGAGATATAGACATCCTTGGGAGCTTATGATGGGAAATATTAGTAAAGGAAATGTTTGTGTTGTTGGAGATGCTTTACACCCTATGACACCTGATCTTGGTCAAGGGGGGTGTTGTGCTTTAGAGGATGGGGTGGTTTTAGCAAGGTGCTTAGCCGAGGCCTTTTCCAAGAAACCAAAGGAAGAAGAAGAATACAAAAGGATTGAGGAAAGTTTGAAGAAATATGCAAGTGAGAGAAAATGGAGATGCATTGATCTCATTACTGCATCTTATATTGTGGGTTATATTCAACAAAGTGGTTCAAAATTTGTTAACTTCTTTAGGGATAAAATTCTGGCTACATTCCTAGCTGTTCAACTGTTGAAGAAGTCAGATTTTGATTGTGGACAACTAAAATAG
Protein sequence

>MS.gene74931.t1

MDNKGKHGGPCEVRCVRRKLLLEVLTNELPSGTIRYLSKVVAIQESGFSKILHLADGTTIKTKVLIGCDGVNSMVAKWLGFKEASYVESFVTRGYAELKDTHELEPMFMIYPGKGFQGGAVPCDDKCAYWFFACTSPSKQDKELAQDPAKLKQYVLSKLEKIPSYVRSIIENTDLDALHSAPLRYRRPWELIIGNISKDNVCIAGDALHPMAPYIAQGGCCALEDGVVLARCLVMESVMEEDIVIVGAGIAGLTTSLALHRLGVESLVLESSNSLRVSGFALTIWENAWKALDVVGVGDILRHRHIQLHGNVTTTLITGQQTSTTPFKNNKGKHEVRCVRRKLLLEALANELPSGTIRYMSKVVAIQESGFSKILHLVDGTTIKTKWLGFKEASNTGRYATRGYAELKTTHKLEPMFMQYFGKGFRAGALPCDERSVYWFFTWTPISQDKELTRDPANLKQYVVSKLDKMSSDVRYFIENTELDAFQSAPLRYRHPWELMMGNISKGNVCVVGDALHPMTPDLGQGGCCALEDGVVLARCLAEAFSKKPKEEEEYKRIEESLKKYASERKWRCIDLITASYIVGYIQQSGSKFVNFFRDKILATFLAVQLLKKSDFDCGQLK