Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74968.t1 | XP_013470282.1 | 94.4 | 1168 | 55 | 1 | 1 | 1168 | 1 | 1158 | 0.00E+00 | 2053.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74968.t1 | A0A072W234 | 94.4 | 1168 | 55 | 1 | 1 | 1168 | 1 | 1158 | 0.0e+00 | 2053.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051433 | MS.gene74968 | 0.800879 | 1.17E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74968.t1 | MTR_1g112190 | 95.120 | 1168 | 47 | 1 | 1 | 1168 | 1 | 1158 | 0.0 | 2234 |
| MS.gene74968.t1 | MTR_1g112190 | 95.034 | 1168 | 47 | 2 | 1 | 1168 | 1 | 1157 | 0.0 | 2227 |
| MS.gene74968.t1 | MTR_4g053240 | 31.326 | 1229 | 649 | 40 | 81 | 1165 | 38 | 1215 | 2.04e-110 | 374 |
| MS.gene74968.t1 | MTR_4g053240 | 30.690 | 1261 | 628 | 43 | 81 | 1165 | 38 | 1228 | 3.14e-101 | 348 |
| MS.gene74968.t1 | MTR_4g053240 | 30.288 | 1248 | 652 | 39 | 81 | 1165 | 38 | 1230 | 1.21e-98 | 341 |
| MS.gene74968.t1 | MTR_4g053240 | 30.288 | 1248 | 652 | 39 | 81 | 1165 | 90 | 1282 | 1.93e-98 | 341 |
| MS.gene74968.t1 | MTR_2g040470 | 30.429 | 769 | 403 | 26 | 473 | 1165 | 554 | 1266 | 1.18e-64 | 240 |
| MS.gene74968.t1 | MTR_2g040470 | 30.299 | 769 | 405 | 25 | 473 | 1165 | 554 | 1267 | 1.63e-64 | 240 |
| MS.gene74968.t1 | MTR_4g125820 | 28.200 | 961 | 495 | 32 | 331 | 1165 | 413 | 1304 | 6.65e-53 | 203 |
| MS.gene74968.t1 | MTR_2g040470 | 29.020 | 510 | 269 | 14 | 473 | 929 | 554 | 1023 | 6.29e-40 | 161 |
| MS.gene74968.t1 | MTR_4g125820 | 27.419 | 682 | 350 | 22 | 331 | 923 | 413 | 1038 | 2.27e-35 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74968.t1 | AT2G19390 | 26.935 | 1266 | 631 | 51 | 70 | 1165 | 64 | 1205 | 2.11e-58 | 221 |
| MS.gene74968.t1 | AT2G19390 | 26.935 | 1266 | 631 | 51 | 70 | 1165 | 64 | 1205 | 2.11e-58 | 221 |
| MS.gene74968.t1 | AT4G29790 | 26.573 | 1287 | 681 | 52 | 34 | 1165 | 28 | 1205 | 8.21e-53 | 203 |
| MS.gene74968.t1 | AT5G22450 | 32.653 | 392 | 183 | 11 | 785 | 1168 | 835 | 1153 | 1.78e-42 | 170 |
| MS.gene74968.t1 | AT5G22450 | 33.110 | 447 | 216 | 16 | 328 | 747 | 333 | 723 | 1.12e-34 | 144 |
| MS.gene74968.t1 | AT5G22450 | 30.682 | 264 | 175 | 5 | 50 | 311 | 4 | 261 | 8.75e-18 | 90.1 |
| MS.gene74968.t1 | AT5G22450 | 32.653 | 392 | 183 | 11 | 785 | 1168 | 835 | 1153 | 1.78e-42 | 170 |
| MS.gene74968.t1 | AT5G22450 | 33.110 | 447 | 216 | 16 | 328 | 747 | 333 | 723 | 1.12e-34 | 144 |
| MS.gene74968.t1 | AT5G22450 | 30.682 | 264 | 175 | 5 | 50 | 311 | 4 | 261 | 8.75e-18 | 90.1 |
| MS.gene74968.t1 | AT5G22450 | 32.653 | 392 | 183 | 11 | 785 | 1168 | 835 | 1153 | 1.78e-42 | 170 |
| MS.gene74968.t1 | AT5G22450 | 33.110 | 447 | 216 | 16 | 328 | 747 | 333 | 723 | 1.12e-34 | 144 |
| MS.gene74968.t1 | AT5G22450 | 30.682 | 264 | 175 | 5 | 50 | 311 | 4 | 261 | 8.75e-18 | 90.1 |
Find 289 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCCTGCTGTTGTTAAAT+TGG | 0.155577 | 1.3:-76058901 | None:intergenic |
| GACAGTCAGACGTTTGTTTC+TGG | 0.207012 | 1.3:+76051408 | MS.gene74968:CDS |
| TCATTCTGAAATTGATTCTT+TGG | 0.208369 | 1.3:-76052056 | None:intergenic |
| TACACAAATTGAACAAAGTT+TGG | 0.242640 | 1.3:+76052021 | MS.gene74968:CDS |
| GGTCTCAAGGCCAGCTGCTT+TGG | 0.250182 | 1.3:+76066214 | MS.gene74968:CDS |
| GTCTCAAGGCCAGCTGCTTT+GGG | 0.257683 | 1.3:+76066215 | MS.gene74968:CDS |
| TTATTCAGAATGACATTCTT+AGG | 0.257932 | 1.3:-76052182 | None:intergenic |
| AACTCTTGGCAATTCGTTCT+TGG | 0.259541 | 1.3:+76066752 | MS.gene74968:CDS |
| AGAGGTAGCATTCCCTTTAC+AGG | 0.260163 | 1.3:-76058951 | None:intergenic |
| TTGGCTGTTCTAGTTCATTT+TGG | 0.265840 | 1.3:+76055969 | MS.gene74968:CDS |
| TAGAAGTTTACCACTAGTTC+TGG | 0.282708 | 1.3:-76059031 | None:intergenic |
| TCCCGTGTTTCTTCAATTGC+TGG | 0.282994 | 1.3:-76052905 | None:intergenic |
| TGATTCTCCTTTGGAGGCTT+GGG | 0.284378 | 1.3:+76058868 | MS.gene74968:CDS |
| CAGCAAGAATGTGCACTATC+AGG | 0.299539 | 1.3:+76066398 | MS.gene74968:CDS |
| CTCCAAGGCTTTGAGTGTTT+CGG | 0.312802 | 1.3:-76054187 | None:intergenic |
| AAATGGTGAAAGTAAATTAA+AGG | 0.330480 | 1.3:+76054542 | MS.gene74968:CDS |
| TTAGGCCTGCTCTTTAATCT+TGG | 0.338568 | 1.3:-76052164 | None:intergenic |
| TTACATACAGCTGGCATTGC+TGG | 0.340371 | 1.3:-76055862 | None:intergenic |
| GGCTTGTGGCTCTGGTCAAC+TGG | 0.340810 | 1.3:+76066986 | MS.gene74968:CDS |
| AAGCTGACAGGAGCAAAATT+AGG | 0.342707 | 1.3:-76056004 | None:intergenic |
| TTCTGGTGCTAATATGTTGC+AGG | 0.344256 | 1.3:+76051425 | MS.gene74968:CDS |
| AATCAGTTGGCTTGTGGCTC+TGG | 0.348365 | 1.3:+76066978 | MS.gene74968:CDS |
| ACTCTTGGCAATTCGTTCTT+GGG | 0.349689 | 1.3:+76066753 | MS.gene74968:CDS |
| CAATAGCTTTGGACAGCCTT+TGG | 0.357348 | 1.3:+76052805 | MS.gene74968:CDS |
| AAGTATACTGTTACTAGTTC+AGG | 0.360250 | 1.3:+76051522 | MS.gene74968:CDS |
| CATGTAGGAACTTATATTAC+AGG | 0.360509 | 1.3:-76054613 | None:intergenic |
| ATGATTCTCCTTTGGAGGCT+TGG | 0.360754 | 1.3:+76058867 | MS.gene74968:CDS |
| GCACGAATGCAAGAGGCTTC+TGG | 0.361404 | 1.3:+76051663 | MS.gene74968:CDS |
| TAGGTAAAGACCTGGATTCT+TGG | 0.362606 | 1.3:+76067135 | MS.gene74968:CDS |
| GGAACTAGCGCTGCAAAGTA+TGG | 0.362981 | 1.3:+76066182 | MS.gene74968:CDS |
| GTGTTTCGGAAGAATGAGAT+AGG | 0.365732 | 1.3:-76054173 | None:intergenic |
| CACGAGCCGGAGTTGCAAAT+AGG | 0.371672 | 1.3:-76066322 | None:intergenic |
| TTTCATCACAATTTAAGAAC+GGG | 0.373777 | 1.3:-76054338 | None:intergenic |
| GGCTCTGCTCGATCCATTGA+TGG | 0.377170 | 1.3:+76052962 | MS.gene74968:CDS |
| CTTAACAGACGTGCCTGAAC+TGG | 0.379880 | 1.3:+76067094 | MS.gene74968:CDS |
| GCCTAACCCATTGTGCCAAA+TGG | 0.380115 | 1.3:-76054269 | None:intergenic |
| TTCGACATCTTCAGCTGATT+CGG | 0.380329 | 1.3:+76051452 | MS.gene74968:CDS |
| GAATCTGGCGCTGGAGAAAA+TGG | 0.383496 | 1.3:+76054525 | MS.gene74968:CDS |
| GACCCACTTATCGTTTCATT+TGG | 0.386874 | 1.3:-76052086 | None:intergenic |
| GAAGGCTTCATATTTCGAAT+TGG | 0.394462 | 1.3:-76054780 | None:intergenic |
| GACCTGGATGCTGCCAAGAT+TGG | 0.397485 | 1.3:+76066651 | MS.gene74968:CDS |
| TATGGAGGATAAACTCTTGC+TGG | 0.397570 | 1.3:+76058985 | MS.gene74968:CDS |
| TGCCGGATGTTTGAGGAAAC+CGG | 0.399684 | 1.3:+76066263 | MS.gene74968:CDS |
| CAGGTCCCGGGGACATCTCT+TGG | 0.401708 | 1.3:+76051555 | MS.gene74968:CDS |
| ACACAAATTGAACAAAGTTT+GGG | 0.413212 | 1.3:+76052022 | MS.gene74968:CDS |
| CACTTTGAGATAATCTAGTC+GGG | 0.413876 | 1.3:-76054500 | None:intergenic |
| TAAATTAAAGGCGGAAGGAT+TGG | 0.414365 | 1.3:+76054554 | MS.gene74968:CDS |
| TCCCGGTTTCCTCAAACATC+CGG | 0.414699 | 1.3:-76066265 | None:intergenic |
| TGCTAGATGCCGGATGTTTG+AGG | 0.415315 | 1.3:+76066256 | MS.gene74968:CDS |
| GAAATGCAAGTTCCATTAGA+AGG | 0.416262 | 1.3:+76054357 | MS.gene74968:CDS |
| TTGATAGCACCCTTGGATAT+TGG | 0.416356 | 1.3:-76054435 | None:intergenic |
| CTCCCGCATACCAGTGGATT+CGG | 0.421173 | 1.3:+76051620 | MS.gene74968:CDS |
| ACGTACCCATTTGGCACAAT+GGG | 0.423952 | 1.3:+76054263 | MS.gene74968:CDS |
| CCGACACTGTTTCCTGTAAA+GGG | 0.424460 | 1.3:+76058939 | MS.gene74968:CDS |
| AGTAAAGCTCTTGCTCATCT+TGG | 0.424989 | 1.3:+76054942 | MS.gene74968:CDS |
| TGCAAAGTATGGACTTTCTA+AGG | 0.426606 | 1.3:+76066193 | MS.gene74968:CDS |
| TACATCAGCTATTGAGATAC+AGG | 0.434445 | 1.3:+76052214 | MS.gene74968:CDS |
| TTCGAAAAGCACAATCTTCA+AGG | 0.434742 | 1.3:-76051584 | None:intergenic |
| CCCATTTGGCACAATGGGTT+AGG | 0.435068 | 1.3:+76054268 | MS.gene74968:CDS |
| AGATTGGACCAATACTGAAC+GGG | 0.436516 | 1.3:+76066667 | MS.gene74968:CDS |
| CAATGGTAAACGTACCCATT+TGG | 0.437771 | 1.3:+76054254 | MS.gene74968:CDS |
| TCCAACCTGGCAGGTAGGTC+AGG | 0.438054 | 1.3:+76055801 | MS.gene74968:intron |
| GCTCATCTTGGAGATATTGC+GGG | 0.438055 | 1.3:+76054954 | MS.gene74968:CDS |
| TCCAGGTCAGAGGGATGGTC+TGG | 0.438178 | 1.3:-76066636 | None:intergenic |
| TGAGGCTCGTTCACATTTGA+AGG | 0.438569 | 1.3:-76054213 | None:intergenic |
| TCGTTCTTGGGTGGAGCAAA+AGG | 0.439437 | 1.3:+76066765 | MS.gene74968:CDS |
| TTCAAGGGGACTTTGTCAAA+TGG | 0.441047 | 1.3:+76051324 | MS.gene74968:CDS |
| ACTTCTGTGGAGTCCAGTTC+AGG | 0.443329 | 1.3:-76067107 | None:intergenic |
| GCTTCAAGGGCACCTCGAAC+TGG | 0.443422 | 1.3:+76054123 | MS.gene74968:CDS |
| TTTGGACAGCCTTTGGCAAT+CGG | 0.443677 | 1.3:+76052812 | MS.gene74968:CDS |
| AAGAGATGATTCTCCTTTGG+AGG | 0.446072 | 1.3:+76058862 | MS.gene74968:CDS |
| GTTCAGTATTGGTCCAATCT+TGG | 0.446244 | 1.3:-76066664 | None:intergenic |
| GAAGGGGAACAACCTTCTAA+TGG | 0.447725 | 1.3:-76054369 | None:intergenic |
| GAAGGGCAAAACAATAGCTT+TGG | 0.448410 | 1.3:+76052794 | MS.gene74968:CDS |
| TGAAAGAGATGATTCTCCTT+TGG | 0.449392 | 1.3:+76058859 | MS.gene74968:CDS |
| TTCCGAAACACTCAAAGCCT+TGG | 0.449624 | 1.3:+76054185 | MS.gene74968:CDS |
| CTAAAGCGAGCTAATGAGTC+TGG | 0.450921 | 1.3:+76053013 | MS.gene74968:CDS |
| CTTGGATTTGCAAACTCTGT+AGG | 0.451805 | 1.3:-76052146 | None:intergenic |
| GCTGGCATTGCTGGCAAAGT+TGG | 0.453233 | 1.3:-76055853 | None:intergenic |
| AAATGGGCAGAGGGGAAATT+CGG | 0.454592 | 1.3:+76051341 | MS.gene74968:CDS |
| GAGAATTATGAGCAAGTGGC+AGG | 0.454793 | 1.3:-76066376 | None:intergenic |
| TTCAAGCAGTAGAAGAAGGC+AGG | 0.455185 | 1.3:+76065713 | MS.gene74968:CDS |
| CGAACTGGTGATTTGATAGC+TGG | 0.455232 | 1.3:+76054138 | MS.gene74968:CDS |
| TCGCGAGGAATCGACTTTCA+AGG | 0.457431 | 1.3:+76051308 | MS.gene74968:CDS |
| CCTAACCCATTGTGCCAAAT+GGG | 0.457881 | 1.3:-76054268 | None:intergenic |
| GCAGAAGGAATGCTTCCAAC+AGG | 0.459208 | 1.3:+76065544 | MS.gene74968:CDS |
| TTATCTCAAAGTGAAGAATC+TGG | 0.461189 | 1.3:+76054510 | MS.gene74968:CDS |
| TATATTACAGGAATTATTTG+TGG | 0.461643 | 1.3:-76054601 | None:intergenic |
| GCATCAGGTTAAAACAATAG+AGG | 0.462878 | 1.3:+76056138 | MS.gene74968:intron |
| ACCGACACTGTTTCCTGTAA+AGG | 0.465916 | 1.3:+76058938 | MS.gene74968:CDS |
| TCAGTAAGTGGGACAATCAA+TGG | 0.466217 | 1.3:+76054237 | MS.gene74968:CDS |
| TTACCGGGGCATCACTTTGA+AGG | 0.467253 | 1.3:-76056192 | None:intergenic |
| TTGAAACCTACATCAACTCT+TGG | 0.468880 | 1.3:+76066738 | MS.gene74968:CDS |
| TGCAGGTTCATTTCCTTGCA+CGG | 0.469228 | 1.3:+76066593 | MS.gene74968:intron |
| TTCAATTTCTCCGAATCCAC+TGG | 0.471800 | 1.3:-76051630 | None:intergenic |
| TTGCACGGAGCAAAATGTCT+TGG | 0.471921 | 1.3:+76066608 | MS.gene74968:CDS |
| ATCAGCTCAGTCTTCAAAGT+TGG | 0.472482 | 1.3:+76051479 | MS.gene74968:CDS |
| TGAGGAACAAAGACACTTCT+CGG | 0.472612 | 1.3:+76066805 | MS.gene74968:CDS |
| TTGTCGCAAAGTCCTCTTGA+GGG | 0.473433 | 1.3:+76058623 | MS.gene74968:CDS |
| ACTCTTTGATACAATGGTGC+TGG | 0.474021 | 1.3:-76058767 | None:intergenic |
| CTCCGAATCCACTGGTATGC+GGG | 0.476667 | 1.3:-76051622 | None:intergenic |
| CTGCTTTGGGTTTCATGAAG+AGG | 0.478689 | 1.3:+76066228 | MS.gene74968:CDS |
| CAAATCCAAGATTAAAGAGC+AGG | 0.478922 | 1.3:+76052159 | MS.gene74968:CDS |
| AGAACCAATTTAACAACAGC+AGG | 0.480454 | 1.3:+76058897 | MS.gene74968:CDS |
| ATCAAAAGAGCCACCCTCAA+TGG | 0.480773 | 1.3:+76058679 | MS.gene74968:CDS |
| TGCACGGAGCAAAATGTCTT+GGG | 0.480816 | 1.3:+76066609 | MS.gene74968:CDS |
| AGGCACGTCTGTTAAGTCCA+TGG | 0.484505 | 1.3:-76067087 | None:intergenic |
| CTTGGCAATTCGTTCTTGGG+TGG | 0.488638 | 1.3:+76066756 | MS.gene74968:CDS |
| AGGTGAGTTAAGACAGGTCC+CGG | 0.491255 | 1.3:+76051542 | MS.gene74968:CDS |
| AGTAGAAGAAGGCAGGGAAA+TGG | 0.492162 | 1.3:+76065720 | MS.gene74968:CDS |
| AGACAAAAGGCAAAGCTTCA+AGG | 0.493547 | 1.3:+76054109 | MS.gene74968:CDS |
| TATTAATTCTGAAAATCAGT+TGG | 0.494790 | 1.3:+76066965 | MS.gene74968:CDS |
| TCAAGGGGACTTTGTCAAAT+GGG | 0.495511 | 1.3:+76051325 | MS.gene74968:CDS |
| TTGGATTTGCAAACTCTGTA+GGG | 0.495606 | 1.3:-76052145 | None:intergenic |
| CGCGAGGAATCGACTTTCAA+GGG | 0.495893 | 1.3:+76051309 | MS.gene74968:CDS |
| GGCACGTCTGTTAAGTCCAT+GGG | 0.502249 | 1.3:-76067086 | None:intergenic |
| TGCTCATCTTGGAGATATTG+CGG | 0.502630 | 1.3:+76054953 | MS.gene74968:CDS |
| AAATAGGATGTCTTTAAACA+TGG | 0.504700 | 1.3:-76066306 | None:intergenic |
| TTCATGAAACCCAAAGCAGC+TGG | 0.504765 | 1.3:-76066224 | None:intergenic |
| TAAAAGCCTGATCTTGCTGA+TGG | 0.504853 | 1.3:+76065485 | MS.gene74968:intron |
| AACTTTGAAGACTGAGCTGA+TGG | 0.505026 | 1.3:-76051477 | None:intergenic |
| GGTATTTATCTACAGACAAA+AGG | 0.505651 | 1.3:+76054096 | MS.gene74968:CDS |
| AAATTCGGTAAATAGTGATT+CGG | 0.505843 | 1.3:+76051356 | MS.gene74968:CDS |
| AGGATCTCTCGGCAAGTTGG+TGG | 0.506045 | 1.3:+76066938 | MS.gene74968:CDS |
| AATGTTGTTGATAGCACCCT+TGG | 0.507366 | 1.3:-76054442 | None:intergenic |
| ATCAAAGATGTTTGTCTCAA+GGG | 0.507612 | 1.3:+76056164 | MS.gene74968:CDS |
| CAACCTCCATCAGCAAGATC+AGG | 0.507945 | 1.3:-76065491 | None:intergenic |
| GGCCCTTGAGCAAGTTGCTA+TGG | 0.508158 | 1.3:+76065866 | MS.gene74968:CDS |
| GACTTTGTCAAATGGGCAGA+GGG | 0.508226 | 1.3:+76051332 | MS.gene74968:CDS |
| TACCTCTGAGCAAACGTGTA+TGG | 0.509694 | 1.3:+76058967 | MS.gene74968:CDS |
| GCTCTGCTCGATCCATTGAT+GGG | 0.510443 | 1.3:+76052963 | MS.gene74968:CDS |
| AAGCTGAACAAAGTAGAGAC+TGG | 0.511005 | 1.3:+76054654 | MS.gene74968:CDS |
| GACAAAAGGCAAAGCTTCAA+GGG | 0.511520 | 1.3:+76054110 | MS.gene74968:CDS |
| TTCCTCGCGACTAGCTGTGC+TGG | 0.511869 | 1.3:-76051295 | None:intergenic |
| CTTATTCAAGCAGTAGAAGA+AGG | 0.514559 | 1.3:+76065709 | MS.gene74968:CDS |
| TTGAATAATAGTTTGATCAA+CGG | 0.516324 | 1.3:-76065519 | None:intergenic |
| TGTTTCGGAAGAATGAGATA+GGG | 0.517088 | 1.3:-76054172 | None:intergenic |
| CTGCCTCTGTCTCCCTCAAG+AGG | 0.518984 | 1.3:-76058635 | None:intergenic |
| TTTACCTACACCTACTTCTG+TGG | 0.520097 | 1.3:-76067120 | None:intergenic |
| ATAGCACCCTTGGATATTGG+TGG | 0.520217 | 1.3:-76054432 | None:intergenic |
| ATTGTCCCACTTACTGAATG+AGG | 0.521792 | 1.3:-76054231 | None:intergenic |
| AACGAGCCTCATTCAGTAAG+TGG | 0.522312 | 1.3:+76054225 | MS.gene74968:CDS |
| TATGGACAAACTTGTTGAGT+TGG | 0.522623 | 1.3:+76065884 | MS.gene74968:CDS |
| CTATTCTTTCCGATTGCCAA+AGG | 0.523542 | 1.3:-76052821 | None:intergenic |
| TCACTTTGAGATAATCTAGT+CGG | 0.524689 | 1.3:-76054501 | None:intergenic |
| AACGTACCCATTTGGCACAA+TGG | 0.526428 | 1.3:+76054262 | MS.gene74968:CDS |
| CACATTTGAAGGTTGCTCCA+AGG | 0.531123 | 1.3:-76054202 | None:intergenic |
| GAAGGATTGGACAGAAGCAA+AGG | 0.531529 | 1.3:+76054567 | MS.gene74968:CDS |
| GTCCAATCTTGGCAGCATCC+AGG | 0.532965 | 1.3:-76066653 | None:intergenic |
| CTGCGGATAATAGTTCTTCA+CGG | 0.534224 | 1.3:-76055830 | None:intergenic |
| TCTGAAAATCAGTTGGCTTG+TGG | 0.534672 | 1.3:+76066972 | MS.gene74968:CDS |
| CCTGTGTTACCTCAAACCTA+TGG | 0.536754 | 1.3:-76053053 | None:intergenic |
| TGTCCATAGCAACTTGCTCA+AGG | 0.536950 | 1.3:-76065869 | None:intergenic |
| ATCAACCGTGTCAACCATTG+AGG | 0.538086 | 1.3:-76058693 | None:intergenic |
| TGCTGAGAATTATGAGCAAG+TGG | 0.538433 | 1.3:-76066380 | None:intergenic |
| TTGCCAAATGAAACGATAAG+TGG | 0.539020 | 1.3:+76052083 | MS.gene74968:CDS |
| CTACATGTCAGTGACAGAAA+AGG | 0.539919 | 1.3:+76054629 | MS.gene74968:CDS |
| GTTCTAGTATCAACTTCAGA+AGG | 0.540712 | 1.3:-76054387 | None:intergenic |
| CAAAGTGAAGAATCTGGCGC+TGG | 0.540817 | 1.3:+76054516 | MS.gene74968:CDS |
| AAGGATTGGACAGAAGCAAA+GGG | 0.541925 | 1.3:+76054568 | MS.gene74968:CDS |
| CTTGTGATGCCATAGGTTTG+AGG | 0.543178 | 1.3:+76053044 | MS.gene74968:CDS |
| TCAAGCAGTAGAAGAAGGCA+GGG | 0.543470 | 1.3:+76065714 | MS.gene74968:CDS |
| AGACATCCTATTTGCAACTC+CGG | 0.544450 | 1.3:+76066316 | MS.gene74968:CDS |
| AACTATTATTCAATTGCAGA+AGG | 0.545686 | 1.3:+76065529 | MS.gene74968:CDS |
| TCCAGACCATCCCTCTGACC+TGG | 0.546662 | 1.3:+76066635 | MS.gene74968:CDS |
| GTGCAGTCTTGTGATGCCAT+AGG | 0.548176 | 1.3:+76053037 | MS.gene74968:CDS |
| GAATTGCCAAGAGTTGATGT+AGG | 0.549037 | 1.3:-76066744 | None:intergenic |
| ACGAATTCTACTACAACTAG+TGG | 0.549368 | 1.3:+76054408 | MS.gene74968:CDS |
| AGAAAACCTTCCATGTGCAC+TGG | 0.549511 | 1.3:+76052941 | MS.gene74968:CDS |
| GATCAAAGATGTTTGTCTCA+AGG | 0.549537 | 1.3:+76056163 | MS.gene74968:CDS |
| TAGTTCAGGTGAGTTAAGAC+AGG | 0.550045 | 1.3:+76051536 | MS.gene74968:CDS |
| CAACACCGAGGATGGTGGTA+AGG | 0.553181 | 1.3:+76052847 | MS.gene74968:CDS |
| ACAAACCTTACCACCATCCT+CGG | 0.553794 | 1.3:-76052852 | None:intergenic |
| ATGGACTTTCTAAGGTCTCA+AGG | 0.553908 | 1.3:+76066201 | MS.gene74968:CDS |
| TTGCCTTCAAAGTGATGCCC+CGG | 0.555945 | 1.3:+76056189 | MS.gene74968:CDS |
| AATCATCCATAGGTATGTCT+AGG | 0.556030 | 1.3:-76067205 | None:intergenic |
| CATGGGTTCCTCAGTTTCAA+CGG | 0.556209 | 1.3:-76067069 | None:intergenic |
| CATAGTCTACTTGAAGCAGC+TGG | 0.556894 | 1.3:+76056033 | MS.gene74968:CDS |
| GAAAGAGGAGTGGAAGAGTG+AGG | 0.556919 | 1.3:+76066787 | MS.gene74968:CDS |
| CTAGCTGTGCTGGAACCAAA+CGG | 0.557811 | 1.3:-76051285 | None:intergenic |
| ACCTATGGATGATTTGTCCA+TGG | 0.558680 | 1.3:+76067214 | MS.gene74968:CDS |
| AGAGGACTCTTGCTAGATGC+CGG | 0.560381 | 1.3:+76066246 | MS.gene74968:CDS |
| GAAAGTAAATTAAAGGCGGA+AGG | 0.560796 | 1.3:+76054549 | MS.gene74968:CDS |
| AAGAGGCTTCTGGCAAGTCT+AGG | 0.560990 | 1.3:+76051673 | MS.gene74968:CDS |
| TGTTTCCAAGAGATGTCCCC+GGG | 0.561992 | 1.3:-76051560 | None:intergenic |
| ATTTCATCACAATTTAAGAA+CGG | 0.562207 | 1.3:-76054339 | None:intergenic |
| GCTCGATCCATTGATGGGGA+AGG | 0.562995 | 1.3:+76052968 | MS.gene74968:CDS |
| GAACTGGACTCCACAGAAGT+AGG | 0.565988 | 1.3:+76067110 | MS.gene74968:CDS |
| AGAAGGATCTCTCGGCAAGT+TGG | 0.566379 | 1.3:+76066935 | MS.gene74968:CDS |
| AATAGGATGTCTTTAAACAT+GGG | 0.566852 | 1.3:-76066305 | None:intergenic |
| GTTGGCTTATAAGAAGAAGC+TGG | 0.567275 | 1.3:+76065902 | MS.gene74968:CDS |
| AACAACAGCAGGAGCGAACA+CGG | 0.568159 | 1.3:+76058908 | MS.gene74968:CDS |
| TCGAGCAGAGCCAGTGCACA+TGG | 0.568733 | 1.3:-76052951 | None:intergenic |
| GTATCTCAATAGCTGATGTA+CGG | 0.569687 | 1.3:-76052211 | None:intergenic |
| ACAAGATGATGAGGTTGCGG+TGG | 0.570723 | 1.3:+76067181 | MS.gene74968:CDS |
| GGAGCAAAAGGAAAGAGGAG+TGG | 0.571632 | 1.3:+76066777 | MS.gene74968:CDS |
| AATAGAGACAACACCGAGGA+TGG | 0.572865 | 1.3:+76052839 | MS.gene74968:CDS |
| AGAAGAAGTGCTACTTGATG+AGG | 0.574275 | 1.3:+76066698 | MS.gene74968:CDS |
| ACTATGACATCCAAGCTGAC+AGG | 0.574722 | 1.3:-76056016 | None:intergenic |
| GTCCATAGCAACTTGCTCAA+GGG | 0.575062 | 1.3:-76065868 | None:intergenic |
| AAAGTTGGGTCTGTATCTCA+TGG | 0.575701 | 1.3:+76067035 | MS.gene74968:CDS |
| GTTGATAAATACTAGGCCGA+AGG | 0.575874 | 1.3:+76052776 | MS.gene74968:intron |
| GCCGGATGTTTGAGGAAACC+GGG | 0.576397 | 1.3:+76066264 | MS.gene74968:CDS |
| CAATGTCTAACCAAGAATCC+AGG | 0.577864 | 1.3:-76067145 | None:intergenic |
| CAAATTGAACAAAGTTTGGG+AGG | 0.579124 | 1.3:+76052025 | MS.gene74968:CDS |
| CTTCTTCTGAAAAGAAAGCA+AGG | 0.579313 | 1.3:+76054799 | MS.gene74968:CDS |
| CGGAGAAGTTCTGTTCAAAG+AGG | 0.581970 | 1.3:+76066825 | MS.gene74968:CDS |
| TAATATTTATAGGCGACTCG+TGG | 0.583866 | 1.3:+76066161 | MS.gene74968:intron |
| ACTTCTGCAGAAGGATCTCT+CGG | 0.584321 | 1.3:+76066927 | MS.gene74968:CDS |
| GGTGAGTTAAGACAGGTCCC+GGG | 0.586910 | 1.3:+76051543 | MS.gene74968:CDS |
| CAAGATGATGAGGTTGCGGT+GGG | 0.587515 | 1.3:+76067182 | MS.gene74968:CDS |
| CTGTTTCCAAGAGATGTCCC+CGG | 0.589943 | 1.3:-76051561 | None:intergenic |
| GACAATACTCTTTGATACAA+TGG | 0.590727 | 1.3:-76058773 | None:intergenic |
| ATTCAAAGCACGAATGCAAG+AGG | 0.591247 | 1.3:+76051656 | MS.gene74968:CDS |
| CGGTAAATAGTGATTCGGAT+AGG | 0.592307 | 1.3:+76051361 | MS.gene74968:CDS |
| AGTCCTCTTGAGGGAGACAG+AGG | 0.594083 | 1.3:+76058632 | MS.gene74968:CDS |
| CCCTTTACAGGAAACAGTGT+CGG | 0.594759 | 1.3:-76058939 | None:intergenic |
| ATTTCGAATTGGCTTTGTCG+AGG | 0.595555 | 1.3:-76054769 | None:intergenic |
| TAGTGGACCACCAATATCCA+AGG | 0.596107 | 1.3:+76054425 | MS.gene74968:CDS |
| GCAGAGCCAGTGCACATGGA+AGG | 0.596161 | 1.3:-76052947 | None:intergenic |
| ACGGTTGATCAACATCGTGC+AGG | 0.596928 | 1.3:+76058707 | MS.gene74968:CDS |
| CTTGGCAGCATCCAGGTCAG+AGG | 0.599394 | 1.3:-76066646 | None:intergenic |
| TTCTAGTATCAACTTCAGAA+GGG | 0.600671 | 1.3:-76054386 | None:intergenic |
| GGACTTTGTCAAATGGGCAG+AGG | 0.604970 | 1.3:+76051331 | MS.gene74968:CDS |
| GCTATCAAATCACCAGTTCG+AGG | 0.605287 | 1.3:-76054135 | None:intergenic |
| GATCAAACTGAAGAAACCGT+TGG | 0.606225 | 1.3:+76058812 | MS.gene74968:CDS |
| TTGGCAGCATCCAGGTCAGA+GGG | 0.607725 | 1.3:-76066645 | None:intergenic |
| CTCTGCTCGATCCATTGATG+GGG | 0.610826 | 1.3:+76052964 | MS.gene74968:CDS |
| TCAAAATCCCAAGCCTCCAA+AGG | 0.611920 | 1.3:-76058875 | None:intergenic |
| TGGGTGGAGCAAAAGGAAAG+AGG | 0.612196 | 1.3:+76066772 | MS.gene74968:CDS |
| AGTAGGTGTAGGTAAAGACC+TGG | 0.612927 | 1.3:+76067127 | MS.gene74968:CDS |
| TAGGTCTGCAAGAGTTCGTG+AGG | 0.614234 | 1.3:+76051380 | MS.gene74968:CDS |
| TTGATAAATACTAGGCCGAA+GGG | 0.615660 | 1.3:+76052777 | MS.gene74968:intron |
| CTCCATACACGTTTGCTCAG+AGG | 0.616772 | 1.3:-76058969 | None:intergenic |
| TACCAGCAATTGAAGAAACA+CGG | 0.617762 | 1.3:+76052903 | MS.gene74968:CDS |
| TCTGATCTCCCGCATACCAG+TGG | 0.619063 | 1.3:+76051614 | MS.gene74968:CDS |
| TTGCTGGAGCTACAGAGTGT+CGG | 0.619163 | 1.3:+76059001 | MS.gene74968:CDS |
| TTTACAAGATGATGAGGTTG+CGG | 0.621336 | 1.3:+76067178 | MS.gene74968:CDS |
| TCAACCGTGTCAACCATTGA+GGG | 0.622838 | 1.3:-76058692 | None:intergenic |
| CGGCATTTATCCAGAACTAG+TGG | 0.622881 | 1.3:+76059021 | MS.gene74968:CDS |
| CAGCATCCAGGTCAGAGGGA+TGG | 0.623245 | 1.3:-76066641 | None:intergenic |
| TTCATCACAATTTAAGAACG+GGG | 0.623424 | 1.3:-76054337 | None:intergenic |
| TCGCACTCGAAGAGCAAATG+TGG | 0.623799 | 1.3:+76054311 | MS.gene74968:CDS |
| AAGCCTGATCTTGCTGATGG+AGG | 0.624176 | 1.3:+76065488 | MS.gene74968:intron |
| CAACTGTCTACTTCTGCAGA+AGG | 0.624476 | 1.3:+76066918 | MS.gene74968:CDS |
| TTCTTGGTTAGACATTGATG+TGG | 0.624762 | 1.3:+76067151 | MS.gene74968:CDS |
| TGTCTGTAGATAAATACCAC+CGG | 0.626571 | 1.3:-76054091 | None:intergenic |
| TGAGCGTAAAATAAAACCAA+AGG | 0.626997 | 1.3:+76066878 | MS.gene74968:CDS |
| TCTCCGAATCCACTGGTATG+CGG | 0.628198 | 1.3:-76051623 | None:intergenic |
| ATTGCTGGCAAAGTTGGCTG+CGG | 0.628484 | 1.3:-76055847 | None:intergenic |
| AAGATTGGACCAATACTGAA+CGG | 0.628744 | 1.3:+76066666 | MS.gene74968:CDS |
| GGTGGGCCTAGACATACCTA+TGG | 0.629682 | 1.3:+76067199 | MS.gene74968:CDS |
| GTGTTGAAGAGAAGATTCAA+AGG | 0.631741 | 1.3:+76052879 | MS.gene74968:CDS |
| CTCTGAGCAAACGTGTATGG+AGG | 0.634585 | 1.3:+76058970 | MS.gene74968:CDS |
| TGGTGAAAGTAAATTAAAGG+CGG | 0.634748 | 1.3:+76054545 | MS.gene74968:CDS |
| TCTAGTATCAACTTCAGAAG+GGG | 0.634804 | 1.3:-76054385 | None:intergenic |
| AACAAAGTAGAGACTGGAGA+TGG | 0.636547 | 1.3:+76054660 | MS.gene74968:CDS |
| CGTTGAAACTGAGGAACCCA+TGG | 0.639492 | 1.3:+76067070 | MS.gene74968:CDS |
| ACCAGCAATTGAAGAAACAC+GGG | 0.640027 | 1.3:+76052904 | MS.gene74968:CDS |
| GATGGTGGTAAGGTTTGTGA+TGG | 0.640212 | 1.3:+76052857 | MS.gene74968:CDS |
| TGCCAAATGAAACGATAAGT+GGG | 0.640551 | 1.3:+76052084 | MS.gene74968:CDS |
| TATGCGGGAGATCAGATTAG+CGG | 0.644517 | 1.3:-76051607 | None:intergenic |
| TCTGGTGCTAATATGTTGCA+GGG | 0.644953 | 1.3:+76051426 | MS.gene74968:CDS |
| ACTTTGAGATAATCTAGTCG+GGG | 0.645712 | 1.3:-76054499 | None:intergenic |
| TTTGTCGCAAAGTCCTCTTG+AGG | 0.647090 | 1.3:+76058622 | MS.gene74968:CDS |
| CATTAATCTTCACAGAACCA+TGG | 0.649855 | 1.3:-76067231 | None:intergenic |
| ACGAGCCTCATTCAGTAAGT+GGG | 0.650960 | 1.3:+76054226 | MS.gene74968:CDS |
| AGAGACAACACCGAGGATGG+TGG | 0.651254 | 1.3:+76052842 | MS.gene74968:CDS |
| AGACTGGAGATGGTCTGCGT+AGG | 0.659070 | 1.3:+76054670 | MS.gene74968:CDS |
| GCCACCCTCAATGGTTGACA+CGG | 0.659236 | 1.3:+76058688 | MS.gene74968:CDS |
| GGTCTGCGTAGGCAGTGTCG+TGG | 0.659646 | 1.3:+76054681 | MS.gene74968:CDS |
| GTGAGTTAAGACAGGTCCCG+GGG | 0.666016 | 1.3:+76051544 | MS.gene74968:CDS |
| ACCATGGACAAATCATCCAT+AGG | 0.666202 | 1.3:-76067215 | None:intergenic |
| GGATGCTTTACAAGATGATG+AGG | 0.673649 | 1.3:+76067172 | MS.gene74968:CDS |
| TTGGACCAATACTGAACGGG+GGG | 0.674966 | 1.3:+76066670 | MS.gene74968:CDS |
| AAGGCAGGGAAATGGAGCCA+CGG | 0.677413 | 1.3:+76065728 | MS.gene74968:CDS |
| ACCGTGTCAACCATTGAGGG+TGG | 0.678945 | 1.3:-76058689 | None:intergenic |
| GTTCTTCTGCAAGTAACACA+AGG | 0.680779 | 1.3:+76066853 | MS.gene74968:CDS |
| GATTGGACCAATACTGAACG+GGG | 0.681882 | 1.3:+76066668 | MS.gene74968:CDS |
| GCGAGGAATCGACTTTCAAG+GGG | 0.684813 | 1.3:+76051310 | MS.gene74968:CDS |
| TTCCAGCACAGCTAGTCGCG+AGG | 0.685484 | 1.3:+76051293 | MS.gene74968:CDS |
| GAAGTGCTACTTGATGAGGT+TGG | 0.688688 | 1.3:+76066702 | MS.gene74968:CDS |
| ACTTTGTCAAATGGGCAGAG+GGG | 0.689557 | 1.3:+76051333 | MS.gene74968:CDS |
| AGTGGACCACCAATATCCAA+GGG | 0.702970 | 1.3:+76054426 | MS.gene74968:CDS |
| GACTCCACAGAAGTAGGTGT+AGG | 0.713793 | 1.3:+76067116 | MS.gene74968:CDS |
| AGGATTGGACAGAAGCAAAG+GGG | 0.717146 | 1.3:+76054569 | MS.gene74968:CDS |
| ATTGGACCAATACTGAACGG+GGG | 0.718927 | 1.3:+76066669 | MS.gene74968:CDS |
| AGGTCTGCAAGAGTTCGTGA+GGG | 0.721861 | 1.3:+76051381 | MS.gene74968:CDS |
| AAAGAATAGAGACAACACCG+AGG | 0.821156 | 1.3:+76052835 | MS.gene74968:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76051279 | 76067244 | 76051279 | ID=MS.gene74968 |
| chr1.3 | mRNA | 76051279 | 76067244 | 76051279 | ID=MS.gene74968.t1;Parent=MS.gene74968 |
| chr1.3 | exon | 76051279 | 76051694 | 76051279 | ID=MS.gene74968.t1.exon1;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76051279 | 76051694 | 76051279 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76051995 | 76052235 | 76051995 | ID=MS.gene74968.t1.exon2;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76051995 | 76052235 | 76051995 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76052791 | 76053065 | 76052791 | ID=MS.gene74968.t1.exon3;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76052791 | 76053065 | 76052791 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76054065 | 76054820 | 76054065 | ID=MS.gene74968.t1.exon4;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76054065 | 76054820 | 76054065 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76054920 | 76054975 | 76054920 | ID=MS.gene74968.t1.exon5;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76054920 | 76054975 | 76054920 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76055814 | 76055876 | 76055814 | ID=MS.gene74968.t1.exon6;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76055814 | 76055876 | 76055814 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76055966 | 76056054 | 76055966 | ID=MS.gene74968.t1.exon7;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76055966 | 76056054 | 76055966 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76056145 | 76056210 | 76056145 | ID=MS.gene74968.t1.exon8;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76056145 | 76056210 | 76056145 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76058596 | 76059042 | 76058596 | ID=MS.gene74968.t1.exon9;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76058596 | 76059042 | 76058596 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76065491 | 76065565 | 76065491 | ID=MS.gene74968.t1.exon10;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76065491 | 76065565 | 76065491 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76065679 | 76065749 | 76065679 | ID=MS.gene74968.t1.exon11;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76065679 | 76065749 | 76065679 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76065866 | 76065923 | 76065866 | ID=MS.gene74968.t1.exon12;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76065866 | 76065923 | 76065866 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76066173 | 76066419 | 76066173 | ID=MS.gene74968.t1.exon13;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76066173 | 76066419 | 76066173 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| chr1.3 | exon | 76066598 | 76067244 | 76066598 | ID=MS.gene74968.t1.exon14;Parent=MS.gene74968.t1 |
| chr1.3 | CDS | 76066598 | 76067244 | 76066598 | ID=cds.MS.gene74968.t1;Parent=MS.gene74968.t1 |
| Gene Sequence |
| Protein sequence |
