Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75140.t1 | XP_024628525.1 | 97.9 | 751 | 12 | 3 | 1 | 750 | 1 | 748 | 0.00E+00 | 1380.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75140.t1 | A0A396JZT7 | 98.7 | 719 | 7 | 2 | 33 | 750 | 17 | 734 | 0.0e+00 | 1360.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75140 | MS.gene80831 | PPI |
| MS.gene75140 | MS.gene98829 | PPI |
| MS.gene82577 | MS.gene75140 | PPI |
| MS.gene75140 | MS.gene05448 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75140.t1 | MTR_1g115260 | 97.970 | 739 | 9 | 3 | 15 | 750 | 1 | 736 | 0.0 | 1473 |
| MS.gene75140.t1 | MTR_6g084190 | 42.984 | 677 | 349 | 6 | 69 | 740 | 39 | 683 | 0.0 | 540 |
| MS.gene75140.t1 | MTR_7g086350 | 30.339 | 679 | 437 | 10 | 77 | 741 | 8 | 664 | 1.38e-101 | 327 |
| MS.gene75140.t1 | MTR_2g007330 | 28.886 | 727 | 440 | 17 | 59 | 747 | 97 | 784 | 1.20e-78 | 269 |
| MS.gene75140.t1 | MTR_7g006750 | 40.411 | 146 | 77 | 1 | 267 | 412 | 562 | 697 | 8.81e-28 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75140.t1 | AT5G23390 | 58.345 | 725 | 288 | 5 | 34 | 750 | 11 | 729 | 0.0 | 834 |
| MS.gene75140.t1 | AT1G48840 | 44.477 | 688 | 340 | 7 | 69 | 749 | 37 | 689 | 0.0 | 554 |
| MS.gene75140.t1 | AT3G18350 | 42.027 | 671 | 352 | 4 | 74 | 741 | 46 | 682 | 3.65e-175 | 519 |
| MS.gene75140.t1 | AT3G18350 | 42.027 | 671 | 352 | 4 | 74 | 741 | 46 | 682 | 3.65e-175 | 519 |
| MS.gene75140.t1 | AT3G18350 | 42.027 | 671 | 352 | 4 | 74 | 741 | 46 | 682 | 3.65e-175 | 519 |
| MS.gene75140.t1 | AT2G21720 | 31.721 | 703 | 432 | 14 | 61 | 740 | 51 | 728 | 5.78e-103 | 332 |
| MS.gene75140.t1 | AT2G21720 | 31.676 | 704 | 434 | 14 | 61 | 740 | 51 | 731 | 7.04e-103 | 332 |
| MS.gene75140.t1 | AT1G71240 | 28.412 | 718 | 443 | 14 | 59 | 738 | 111 | 795 | 7.53e-74 | 256 |
| MS.gene75140.t1 | AT1G71240 | 28.737 | 689 | 420 | 14 | 88 | 738 | 141 | 796 | 1.89e-73 | 255 |
| MS.gene75140.t1 | AT1G71240 | 26.491 | 570 | 352 | 13 | 59 | 594 | 111 | 647 | 1.38e-41 | 162 |
Find 155 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAATTTCTGTGTATCTTTA+AGG | 0.055572 | 1.1:+80890162 | None:intergenic |
| AGTACTTGCCAGGGCTAATT+TGG | 0.149646 | 1.1:-80890138 | MS.gene75140:CDS |
| TCCTCCAAAGTACATATTAT+TGG | 0.204918 | 1.1:-80887308 | MS.gene75140:CDS |
| CAGCTATGAAAACTAGAAAT+AGG | 0.206345 | 1.1:+80887347 | None:intergenic |
| CGCAAGTTCGCTTTAAATTC+AGG | 0.223832 | 1.1:+80890251 | None:intergenic |
| GTTCTACTGCATTTCGATTT+GGG | 0.239473 | 1.1:+80888046 | None:intergenic |
| TGTTCTACTGCATTTCGATT+TGG | 0.299359 | 1.1:+80888045 | None:intergenic |
| CCAAGGGGTCCAGTCAATTC+AGG | 0.301194 | 1.1:+80890437 | None:intergenic |
| CAACCAGTTCTTCAACATAT+TGG | 0.310600 | 1.1:-80891661 | MS.gene75140:CDS |
| TTATTCTAGTTCCACAAATA+TGG | 0.311179 | 1.1:-80892393 | MS.gene75140:CDS |
| TTCCACAAATATGGCAGTTC+AGG | 0.311684 | 1.1:-80892384 | MS.gene75140:intron |
| ATTTATCATAAACAAGAAAA+TGG | 0.332047 | 1.1:+80891887 | None:intergenic |
| ATGGGAGAGAGTTGAGGAAT+AGG | 0.337939 | 1.1:+80892920 | None:intergenic |
| GTTACGTGTGCAGGGTTATC+AGG | 0.338639 | 1.1:-80891774 | MS.gene75140:intron |
| TGCTAACCGACTACAACTTT+TGG | 0.341873 | 1.1:-80889163 | MS.gene75140:CDS |
| CTCAAAGTACAGAGCATAAT+TGG | 0.352628 | 1.1:+80890532 | None:intergenic |
| TTGAAGATTTCCAACAGAAT+TGG | 0.356177 | 1.1:+80891732 | None:intergenic |
| CACAGATTTGTCAGGAAGTT+CGG | 0.358773 | 1.1:-80890185 | MS.gene75140:CDS |
| GAGAGTTGAGGAATAGGTTT+GGG | 0.369960 | 1.1:+80892926 | None:intergenic |
| GAATCAATTTGTAGAAGAAA+TGG | 0.383745 | 1.1:-80893113 | MS.gene75140:CDS |
| AATTCGTTAGGCTGTTTGAC+AGG | 0.383841 | 1.1:+80889997 | None:intergenic |
| ATTCCAATATGTTGAAGAAC+TGG | 0.390982 | 1.1:+80891658 | None:intergenic |
| GTAGTGGCACTCTTCGGTCT+TGG | 0.392297 | 1.1:-80889897 | MS.gene75140:CDS |
| AGAGAGTTGAGGAATAGGTT+TGG | 0.396548 | 1.1:+80892925 | None:intergenic |
| GATGCGCTCACCAATTCTTC+CGG | 0.405340 | 1.1:-80891919 | MS.gene75140:CDS |
| TCAAAGAGTTGTGGTGGTTA+CGG | 0.411252 | 1.1:+80893011 | None:intergenic |
| AAACTCTACCTCGGGGAGAT+AGG | 0.411450 | 1.1:-80890031 | MS.gene75140:CDS |
| ACGAATTCAACTGCTGCTTC+TGG | 0.414117 | 1.1:-80889981 | MS.gene75140:CDS |
| GTACTTGCCAGGGCTAATTT+GGG | 0.414455 | 1.1:-80890137 | MS.gene75140:CDS |
| TTTGATTCCGAACTTCCTCT+TGG | 0.416689 | 1.1:-80892732 | MS.gene75140:CDS |
| GGCAGTAAAACAATCCCTTC+TGG | 0.417122 | 1.1:-80889787 | MS.gene75140:CDS |
| CGTTTGATGTTATGCTTGCT+TGG | 0.418987 | 1.1:-80892593 | MS.gene75140:CDS |
| AGTACAGAGCATAATTGGTC+AGG | 0.424316 | 1.1:+80890537 | None:intergenic |
| GCCTCCGTTGGTGGTGGTGG+TGG | 0.428559 | 1.1:+80893063 | None:intergenic |
| TCAGGCTTAACAAGTTCAAC+AGG | 0.430565 | 1.1:+80887181 | None:intergenic |
| GAAAGCTATTCGGTATGATC+TGG | 0.431018 | 1.1:-80890486 | MS.gene75140:CDS |
| GAGATAGTACTTGATGTTGA+TGG | 0.432041 | 1.1:-80891697 | MS.gene75140:CDS |
| AGCTATGAAAACTAGAAATA+GGG | 0.437514 | 1.1:+80887348 | None:intergenic |
| TCAGGGAATTCAAAGTAAAC+AGG | 0.441197 | 1.1:+80890269 | None:intergenic |
| TACAAATGTTGCAGTTATGA+AGG | 0.441951 | 1.1:-80889703 | MS.gene75140:intron |
| AGTGTCTCCTGCAGCGGTAG+TGG | 0.446176 | 1.1:-80889913 | MS.gene75140:CDS |
| GAAAAGAACCTTACTTATCA+AGG | 0.448588 | 1.1:+80891854 | None:intergenic |
| TTTCACTCCAAGAGGAAGTT+CGG | 0.448815 | 1.1:+80892725 | None:intergenic |
| TTTGAATCACTTATTCAAGC+TGG | 0.449766 | 1.1:-80887991 | MS.gene75140:CDS |
| GAGTCTACGTCCGGAAGAAT+TGG | 0.451248 | 1.1:+80891909 | None:intergenic |
| ATCACCAATAATATGTACTT+TGG | 0.452320 | 1.1:+80887304 | None:intergenic |
| TAACTTAACGCCTCCGTTGG+TGG | 0.458540 | 1.1:+80893054 | None:intergenic |
| TGATCGGTGATGATGGAATC+AGG | 0.460211 | 1.1:+80892965 | None:intergenic |
| GCAGCGGTAGTGGCACTCTT+CGG | 0.461370 | 1.1:-80889903 | MS.gene75140:CDS |
| GCAAGTTCGCTTTAAATTCA+GGG | 0.462657 | 1.1:+80890252 | None:intergenic |
| AACGCCTCCGTTGGTGGTGG+TGG | 0.463590 | 1.1:+80893060 | None:intergenic |
| CGAACTTGCGACGTGACTAC+TGG | 0.464107 | 1.1:-80890238 | MS.gene75140:CDS |
| CGGTTAGCAGATTCGATGAC+TGG | 0.467013 | 1.1:+80889177 | None:intergenic |
| AAATGGTCGGCAATAAGTAC+TGG | 0.473092 | 1.1:+80888151 | None:intergenic |
| ACCAACGGAGGCGTTAAGTT+AGG | 0.475027 | 1.1:-80893052 | MS.gene75140:CDS |
| AACCTGAACTGCCATATTTG+TGG | 0.475661 | 1.1:+80892382 | None:intergenic |
| AATGTTCTGGCCAATTCTGT+TGG | 0.478165 | 1.1:-80891742 | MS.gene75140:CDS |
| AGAATGAGACTTGGAAGAGG+TGG | 0.479084 | 1.1:+80892880 | None:intergenic |
| CGATGCCCTCCACCTTCACT+TGG | 0.480212 | 1.1:+80889727 | None:intergenic |
| AATAGGTTTGGGAGAATTGA+CGG | 0.480722 | 1.1:+80892937 | None:intergenic |
| TACTTTGAGTCACTTGGCGT+TGG | 0.481887 | 1.1:-80890518 | MS.gene75140:CDS |
| TTGCTACTTTCTCTCCTACA+TGG | 0.489627 | 1.1:+80887253 | None:intergenic |
| CCTAGCTGAAACTCTACCTC+GGG | 0.490226 | 1.1:-80890039 | MS.gene75140:CDS |
| AGAAATTAGAAGTACTTGCC+AGG | 0.496232 | 1.1:-80890148 | MS.gene75140:CDS |
| AGGAGAATGAGACTTGGAAG+AGG | 0.497171 | 1.1:+80892877 | None:intergenic |
| ACCAATAATATGTACTTTGG+AGG | 0.498802 | 1.1:+80887307 | None:intergenic |
| ATCAAATAGACGAGCACCAA+GGG | 0.500919 | 1.1:+80890421 | None:intergenic |
| GTTTGATGTTATGCTTGCTT+GGG | 0.506925 | 1.1:-80892592 | MS.gene75140:CDS |
| AAACGTGAAACGACGAAACT+CGG | 0.507710 | 1.1:+80892611 | None:intergenic |
| TTCTACTGCATTTCGATTTG+GGG | 0.507842 | 1.1:+80888047 | None:intergenic |
| ATTGGAATTGCCGCATGGCC+TGG | 0.507979 | 1.1:-80891643 | MS.gene75140:intron |
| AAGAGTGCCACTACCGCTGC+AGG | 0.510941 | 1.1:+80889906 | None:intergenic |
| AAGTGATTCAAACTGTGTAA+TGG | 0.512494 | 1.1:+80888002 | None:intergenic |
| TCTGGGCGCAGACATGAAAC+AGG | 0.514494 | 1.1:-80890468 | MS.gene75140:CDS |
| GGATAAGGCGGTTTAGAGAA+TGG | 0.515622 | 1.1:-80887225 | MS.gene75140:CDS |
| TCAGCAATAAGAATACAAAC+AGG | 0.516154 | 1.1:+80891967 | None:intergenic |
| AAGAAAATGGAGTCTACGTC+CGG | 0.518433 | 1.1:+80891900 | None:intergenic |
| GTGTGCATGAGAAAGCTATT+CGG | 0.523798 | 1.1:-80890496 | MS.gene75140:CDS |
| GAGATTTCAAAGAGTTGTGG+TGG | 0.524519 | 1.1:+80893005 | None:intergenic |
| TGGAAAAGCAGAAGCTGCAC+AGG | 0.524943 | 1.1:-80889760 | MS.gene75140:CDS |
| ACAAGTTCAACAGGAGCAGC+AGG | 0.530029 | 1.1:+80887190 | None:intergenic |
| CCTGAATTGACTGGACCCCT+TGG | 0.530540 | 1.1:-80890437 | MS.gene75140:CDS |
| AAGCAGCAGTTGAATTCGTT+AGG | 0.530582 | 1.1:+80889985 | None:intergenic |
| TCTACTTGCTATATTGCCAC+AGG | 0.531443 | 1.1:-80887938 | MS.gene75140:intron |
| AAAGTAGCAAACGATGGATA+AGG | 0.532811 | 1.1:-80887240 | MS.gene75140:CDS |
| GCTCTGTACTTTGAGTCACT+TGG | 0.533288 | 1.1:-80890524 | MS.gene75140:CDS |
| AAACAATCCCTTCTGGACAC+TGG | 0.536771 | 1.1:-80889780 | MS.gene75140:CDS |
| TCATTGCAATCATTATGCTC+TGG | 0.538139 | 1.1:-80888122 | MS.gene75140:CDS |
| GGAGGAGTGATCGGTGATGA+TGG | 0.540213 | 1.1:+80892958 | None:intergenic |
| GTTGATGATAAGAAGACAGT+TGG | 0.540394 | 1.1:-80892015 | MS.gene75140:CDS |
| AGAATTGACGGAGGAGTGAT+CGG | 0.542016 | 1.1:+80892949 | None:intergenic |
| AAGAGGAAGTTCGGAATCAA+AGG | 0.542337 | 1.1:+80892734 | None:intergenic |
| AGTTGGTGAGATAAATCCCT+TGG | 0.545390 | 1.1:-80889814 | MS.gene75140:CDS |
| CTTCTTTGAGTGCGCGATAG+CGG | 0.545640 | 1.1:+80890108 | None:intergenic |
| AAAGCTATTCGGTATGATCT+GGG | 0.549979 | 1.1:-80890485 | MS.gene75140:CDS |
| GTCATAAAACCTGAATTGAC+TGG | 0.550070 | 1.1:-80890446 | MS.gene75140:CDS |
| GGAGACGACTTCGTTGGCGA+TGG | 0.553154 | 1.1:+80892901 | None:intergenic |
| AGAGAGATTTCAAAGAGTTG+TGG | 0.555169 | 1.1:+80893002 | None:intergenic |
| AAAAGCTCTTTCACTCCAAG+AGG | 0.564109 | 1.1:+80892717 | None:intergenic |
| TGGCGTAGACATTTCAGAAA+GGG | 0.564583 | 1.1:-80888102 | MS.gene75140:CDS |
| TAAGAAGACAGTTGGTCTTG+AGG | 0.570923 | 1.1:-80892007 | MS.gene75140:CDS |
| TGTTGAAGAACTGGTTGAGT+CGG | 0.574153 | 1.1:+80891667 | None:intergenic |
| CTTAACGCCTCCGTTGGTGG+TGG | 0.574634 | 1.1:+80893057 | None:intergenic |
| TACGTGCACACAGATTTGTC+AGG | 0.575818 | 1.1:-80890193 | MS.gene75140:CDS |
| CTTGCGACGTGACTACTGGT+TGG | 0.576162 | 1.1:-80890234 | MS.gene75140:CDS |
| ATTCGTTAGGCTGTTTGACA+GGG | 0.576982 | 1.1:+80889998 | None:intergenic |
| TCCTAACTTAACGCCTCCGT+TGG | 0.577667 | 1.1:+80893051 | None:intergenic |
| GAGACGACTTCGTTGGCGAT+GGG | 0.579569 | 1.1:+80892902 | None:intergenic |
| AACATATTGGAATTGCCGCA+TGG | 0.579713 | 1.1:-80891648 | MS.gene75140:CDS |
| ACTTGATCAGCATGAACACT+AGG | 0.579984 | 1.1:+80892564 | None:intergenic |
| TGTAGAAGAAATGGAAATCG+AGG | 0.581089 | 1.1:-80893104 | MS.gene75140:CDS |
| TTGGCGATGGGAGAGAGTTG+AGG | 0.581701 | 1.1:+80892914 | None:intergenic |
| TCTACTGCATTTCGATTTGG+GGG | 0.582177 | 1.1:+80888048 | None:intergenic |
| AGGCGTTAAGTTAGGAATGT+GGG | 0.582297 | 1.1:-80893044 | MS.gene75140:CDS |
| GAAGATGCCCAAATTAGCCC+TGG | 0.584679 | 1.1:+80890130 | None:intergenic |
| AGAGGTGGAGACGACTTCGT+TGG | 0.584802 | 1.1:+80892895 | None:intergenic |
| TGATGAAACCGTTGGTGATG+AGG | 0.587749 | 1.1:-80892432 | MS.gene75140:CDS |
| CTGGCGTAGACATTTCAGAA+AGG | 0.588478 | 1.1:-80888103 | MS.gene75140:CDS |
| AAAAGAACCTTACTTATCAA+GGG | 0.589932 | 1.1:+80891855 | None:intergenic |
| GTTTCATCATTACTACAAGT+AGG | 0.599242 | 1.1:+80892446 | None:intergenic |
| GTTGTTTGTGATATCCGAGT+TGG | 0.602375 | 1.1:-80889831 | MS.gene75140:CDS |
| ACGAGGCCAAAAGTTGTAGT+CGG | 0.613401 | 1.1:+80889157 | None:intergenic |
| ACCTAGCTGAAACTCTACCT+CGG | 0.613726 | 1.1:-80890040 | MS.gene75140:CDS |
| TGAGCGCATCGAAAAGATTG+TGG | 0.615013 | 1.1:+80891932 | None:intergenic |
| TGTGGACCAAGTGAAGGTGG+AGG | 0.616658 | 1.1:-80889733 | MS.gene75140:CDS |
| TGAGATAAATCCCTTGGACG+TGG | 0.618215 | 1.1:-80889808 | MS.gene75140:CDS |
| ACACAAGGGAGATGCCATGT+AGG | 0.618248 | 1.1:-80887267 | MS.gene75140:CDS |
| GAGGCGTTAAGTTAGGAATG+TGG | 0.618791 | 1.1:-80893045 | MS.gene75140:CDS |
| GTACAGAGCATAATTGGTCA+GGG | 0.621579 | 1.1:+80890538 | None:intergenic |
| GAAATTAGAAGTACTTGCCA+GGG | 0.622596 | 1.1:-80890147 | MS.gene75140:CDS |
| GGCAACTGTGGACCAAGTGA+AGG | 0.624655 | 1.1:-80889739 | MS.gene75140:CDS |
| AACTGTGGACCAAGTGAAGG+TGG | 0.625377 | 1.1:-80889736 | MS.gene75140:CDS |
| AAGAGTTGTGGTGGTTACGG+AGG | 0.632539 | 1.1:+80893014 | None:intergenic |
| GGTTAGCAGATTCGATGACT+GGG | 0.635781 | 1.1:+80889178 | None:intergenic |
| CGTAGACATTTCAGAAAGGG+AGG | 0.636982 | 1.1:-80888099 | MS.gene75140:CDS |
| AGAAGCTGCACAGGCAACTG+TGG | 0.637250 | 1.1:-80889751 | MS.gene75140:CDS |
| ATCAGCAGTGTCTCCTGCAG+CGG | 0.638879 | 1.1:-80889919 | MS.gene75140:CDS |
| CCCGAGGTAGAGTTTCAGCT+AGG | 0.640810 | 1.1:+80890039 | None:intergenic |
| GTGGACCAAGTGAAGGTGGA+GGG | 0.641291 | 1.1:-80889732 | MS.gene75140:CDS |
| GGAGAGAAAGTAGCAAACGA+TGG | 0.648271 | 1.1:-80887246 | MS.gene75140:CDS |
| AGCATCATCCTCATCACCAA+CGG | 0.651464 | 1.1:+80892424 | None:intergenic |
| TATCAAATAGACGAGCACCA+AGG | 0.663449 | 1.1:+80890420 | None:intergenic |
| GTAGCAAACGATGGATAAGG+CGG | 0.668289 | 1.1:-80887237 | MS.gene75140:CDS |
| AGGTTTGGGAGAATTGACGG+AGG | 0.673127 | 1.1:+80892940 | None:intergenic |
| AGGGATTTATCTCACCAACT+CGG | 0.677132 | 1.1:+80889817 | None:intergenic |
| GAAATACTCACCAGGCCATG+CGG | 0.677568 | 1.1:+80891633 | None:intergenic |
| TGTAGTAATGATGAAACCGT+TGG | 0.689726 | 1.1:-80892440 | MS.gene75140:CDS |
| TAAACGAACAAAATTCAACA+AGG | 0.696080 | 1.1:+80892679 | None:intergenic |
| TATTCATCGAGTGTTACACA+AGG | 0.697962 | 1.1:-80887282 | MS.gene75140:CDS |
| TAAGGCGGTTTAGAGAATGG+TGG | 0.706781 | 1.1:-80887222 | MS.gene75140:CDS |
| TCAAATAGACGAGCACCAAG+GGG | 0.719250 | 1.1:+80890422 | None:intergenic |
| ATTCATCGAGTGTTACACAA+GGG | 0.728416 | 1.1:-80887281 | MS.gene75140:CDS |
| TGCAAGATCCTATCTCCCCG+AGG | 0.734645 | 1.1:+80890023 | None:intergenic |
| CTAGCTGAAACTCTACCTCG+GGG | 0.754230 | 1.1:-80890038 | MS.gene75140:CDS |
| TCTATAGAAGTCTTTCCACG+AGG | 0.763515 | 1.1:+80889140 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATAAATATATAGATATAT+AGG | + | chr1.1:80890882-80890901 | None:intergenic | 10.0% |
| !! | TAAAACAAAATAAATAAATG+TGG | - | chr1.1:80891719-80891738 | MS.gene75140:CDS | 10.0% |
| !!! | ACATTTATTTATTTTGTTTT+AGG | + | chr1.1:80891720-80891739 | None:intergenic | 10.0% |
| !!! | TGAATATAAAAACTATTTTT+TGG | + | chr1.1:80891763-80891782 | None:intergenic | 10.0% |
| !!! | TTTTTTCAAAAATAACATTA+AGG | + | chr1.1:80890636-80890655 | None:intergenic | 10.0% |
| !! | AACAATATAAGAACAAAATT+TGG | - | chr1.1:80890715-80890734 | MS.gene75140:intron | 15.0% |
| !! | ATTTATCATAAACAAGAAAA+TGG | + | chr1.1:80888411-80888430 | None:intergenic | 15.0% |
| !! | GAAATAATATATGTTAAAGT+TGG | - | chr1.1:80892064-80892083 | MS.gene75140:intron | 15.0% |
| !! | TAAAAGCAATTATATGATAA+AGG | + | chr1.1:80888025-80888044 | None:intergenic | 15.0% |
| !! | TAATTTAAATGATTCATTTC+AGG | - | chr1.1:80887821-80887840 | MS.gene75140:intron | 15.0% |
| !!! | AAATTATTTTAAAGCAAAGA+GGG | - | chr1.1:80890682-80890701 | MS.gene75140:intron | 15.0% |
| !!! | AACAACTTAAAATATCTTTT+AGG | + | chr1.1:80889712-80889731 | None:intergenic | 15.0% |
| !!! | TAAAAGATATTTTAAGTTGT+TGG | - | chr1.1:80889711-80889730 | MS.gene75140:CDS | 15.0% |
| !!! | TAATTGTTTTGTTTAAAACT+CGG | - | chr1.1:80891220-80891239 | MS.gene75140:intron | 15.0% |
| !!! | TTTTTATATTCATTGACAAA+TGG | - | chr1.1:80891771-80891790 | MS.gene75140:intron | 15.0% |
| !! | AACTAGATTAGTACTAATTA+GGG | + | chr1.1:80887794-80887813 | None:intergenic | 20.0% |
| !! | AATATGAACAGATATTAATG+TGG | + | chr1.1:80891258-80891277 | None:intergenic | 20.0% |
| !! | ACAAAATAAATAAATGTGGA+AGG | - | chr1.1:80891723-80891742 | MS.gene75140:CDS | 20.0% |
| !! | AGATTAATAAATCCATTGTT+GGG | + | chr1.1:80891572-80891591 | None:intergenic | 20.0% |
| !! | ATCTTAATTTCATTTGATCA+TGG | - | chr1.1:80890659-80890678 | MS.gene75140:intron | 20.0% |
| !! | ATGAAAAAGTTATTGTTGAA+AGG | + | chr1.1:80887459-80887478 | None:intergenic | 20.0% |
| !! | ATGTTGTTAGATATAATGAA+AGG | - | chr1.1:80889043-80889062 | MS.gene75140:intron | 20.0% |
| !! | CATATTAAAAGAAGATACTT+TGG | + | chr1.1:80892443-80892462 | None:intergenic | 20.0% |
| !! | GAAAATCATAAAATTTGAAG+TGG | + | chr1.1:80889983-80890002 | None:intergenic | 20.0% |
| !! | TAACTAGATTAGTACTAATT+AGG | + | chr1.1:80887795-80887814 | None:intergenic | 20.0% |
| !! | TAATGTATATAGGTTATGTT+TGG | - | chr1.1:80887966-80887985 | MS.gene75140:CDS | 20.0% |
| !! | TCATTATATCTAACAACATA+AGG | + | chr1.1:80889042-80889061 | None:intergenic | 20.0% |
| !! | TTAATTTACATTGATGTACA+GGG | - | chr1.1:80892114-80892133 | MS.gene75140:intron | 20.0% |
| !!! | AGTAAGTAATGTTTTATAGT+TGG | + | chr1.1:80890231-80890250 | None:intergenic | 20.0% |
| !!! | ATACAAATGCTTTTGATTTA+TGG | + | chr1.1:80892549-80892568 | None:intergenic | 20.0% |
| !!! | GAAATTATTTTAAAGCAAAG+AGG | - | chr1.1:80890681-80890700 | MS.gene75140:intron | 20.0% |
| !!! | TTTAATTTACATTGATGTAC+AGG | - | chr1.1:80892113-80892132 | MS.gene75140:intron | 20.0% |
| ! | AAAAACATTTACAAGTCAGA+AGG | + | chr1.1:80891432-80891451 | None:intergenic | 25.0% |
| ! | AAAAGAACCTTACTTATCAA+GGG | + | chr1.1:80888443-80888462 | None:intergenic | 25.0% |
| ! | AACATACTTGTAAGCAAAAT+TGG | + | chr1.1:80891363-80891382 | None:intergenic | 25.0% |
| ! | AATATGTATGCAGTAATTTG+TGG | - | chr1.1:80892457-80892476 | MS.gene75140:intron | 25.0% |
| ! | ACTACAATAAAGAACAAAAG+CGG | + | chr1.1:80889199-80889218 | None:intergenic | 25.0% |
| ! | AGCTATGAAAACTAGAAATA+GGG | + | chr1.1:80892950-80892969 | None:intergenic | 25.0% |
| ! | ATATTTGATTGTGCATTATG+TGG | + | chr1.1:80888924-80888943 | None:intergenic | 25.0% |
| ! | ATCACCAATAATATGTACTT+TGG | + | chr1.1:80892994-80893013 | None:intergenic | 25.0% |
| ! | ATTGACAATAGTATGCAAAA+TGG | + | chr1.1:80891910-80891929 | None:intergenic | 25.0% |
| ! | ATTTCACATGAAAACATACA+CGG | - | chr1.1:80889258-80889277 | MS.gene75140:intron | 25.0% |
| ! | CATAAAGTTTCATTGAATGA+GGG | + | chr1.1:80891325-80891344 | None:intergenic | 25.0% |
| ! | CCTTTCAAACTCAAATTATA+AGG | - | chr1.1:80891002-80891021 | MS.gene75140:intron | 25.0% |
| ! | CTAATTTCTGTGTATCTTTA+AGG | + | chr1.1:80890136-80890155 | None:intergenic | 25.0% |
| ! | GAAGACAATGGAAAAAAAAA+TGG | - | chr1.1:80891033-80891052 | MS.gene75140:intron | 25.0% |
| ! | GAATCAATTTGTAGAAGAAA+TGG | - | chr1.1:80887182-80887201 | MS.gene75140:CDS | 25.0% |
| ! | GAGATTAATAAATCCATTGT+TGG | + | chr1.1:80891573-80891592 | None:intergenic | 25.0% |
| ! | GTATAATCTGCATATTACTT+AGG | + | chr1.1:80888197-80888216 | None:intergenic | 25.0% |
| ! | GTATATAAAGCAGAAAGAAA+AGG | + | chr1.1:80889642-80889661 | None:intergenic | 25.0% |
| ! | TAAACGAACAAAATTCAACA+AGG | + | chr1.1:80887619-80887638 | None:intergenic | 25.0% |
| ! | TAATTTACATTGATGTACAG+GGG | - | chr1.1:80892115-80892134 | MS.gene75140:intron | 25.0% |
| ! | TATGTTCATAGTAGTTCTTT+GGG | - | chr1.1:80890975-80890994 | MS.gene75140:intron | 25.0% |
| ! | TCATATTTATTGTTTCCGAT+TGG | - | chr1.1:80891271-80891290 | MS.gene75140:intron | 25.0% |
| ! | TCTCAAATCAACATTTAAGA+AGG | - | chr1.1:80891964-80891983 | MS.gene75140:CDS | 25.0% |
| ! | TCTTGGATTCAAATCAAAAA+AGG | - | chr1.1:80890415-80890434 | MS.gene75140:CDS | 25.0% |
| ! | TGAGAATCGATAATGTATAT+AGG | - | chr1.1:80887956-80887975 | MS.gene75140:CDS | 25.0% |
| ! | TGTTCTTTATTGTAGTCAAA+GGG | - | chr1.1:80889012-80889031 | MS.gene75140:intron | 25.0% |
| ! | TTGATGCTCAATTGAAATTT+GGG | - | chr1.1:80889105-80889124 | MS.gene75140:CDS | 25.0% |
| ! | TTGTTCTTTATTGTAGTCAA+AGG | - | chr1.1:80889011-80889030 | MS.gene75140:intron | 25.0% |
| ! | TTTGATGCTCAATTGAAATT+TGG | - | chr1.1:80889104-80889123 | MS.gene75140:CDS | 25.0% |
| !! | ATATGTATGCAGTAATTTGT+GGG | - | chr1.1:80892458-80892477 | MS.gene75140:intron | 25.0% |
| !! | ATTGTTTTCATAAGCTATTC+TGG | - | chr1.1:80888057-80888076 | MS.gene75140:CDS | 25.0% |
| !! | ATTTCAATTTTCAGTCTGAA+AGG | - | chr1.1:80890914-80890933 | MS.gene75140:intron | 25.0% |
| !! | CCTTATAATTTGAGTTTGAA+AGG | + | chr1.1:80891005-80891024 | None:intergenic | 25.0% |
| !! | CTCTTTGACTATTTTATCTT+CGG | + | chr1.1:80891693-80891712 | None:intergenic | 25.0% |
| !! | GAATCAGTTATTTCGTTATA+TGG | - | chr1.1:80891055-80891074 | MS.gene75140:intron | 25.0% |
| !! | TCATTAGTTATTTCCAGAAT+CGG | - | chr1.1:80888120-80888139 | MS.gene75140:CDS | 25.0% |
| !!! | AAATCAAAAGCATTTGTATG+TGG | - | chr1.1:80892550-80892569 | MS.gene75140:intron | 25.0% |
| !!! | GCAATTGCAATGATTTTTTT+AGG | - | chr1.1:80888258-80888277 | MS.gene75140:intron | 25.0% |
| !!! | TAATTCTTTTAACTCCTTGT+AGG | - | chr1.1:80891084-80891103 | MS.gene75140:intron | 25.0% |
| !!! | TTATTCTAGTTCCACAAATA+TGG | - | chr1.1:80887902-80887921 | MS.gene75140:intron | 25.0% |
| AAATGATCATCATTTAGCTG+AGG | + | chr1.1:80888838-80888857 | None:intergenic | 30.0% | |
| AAGTATTAGCAGACAATCAA+TGG | + | chr1.1:80888466-80888485 | None:intergenic | 30.0% | |
| AAGTGATTCAAACTGTGTAA+TGG | + | chr1.1:80892296-80892315 | None:intergenic | 30.0% | |
| AATACAACAACTTACTGACA+AGG | - | chr1.1:80889666-80889685 | MS.gene75140:intron | 30.0% | |
| AATGATCATCATTTAGCTGA+GGG | + | chr1.1:80888837-80888856 | None:intergenic | 30.0% | |
| AATTTACATTGATGTACAGG+GGG | - | chr1.1:80892116-80892135 | MS.gene75140:intron | 30.0% | |
| ACCAATAATATGTACTTTGG+AGG | + | chr1.1:80892991-80893010 | None:intergenic | 30.0% | |
| AGAGCATACCTATATTGAAA+TGG | - | chr1.1:80888706-80888725 | MS.gene75140:intron | 30.0% | |
| ATAAGATCCCTTGATAAGTA+AGG | - | chr1.1:80888433-80888452 | MS.gene75140:intron | 30.0% | |
| ATTCCAATATGTTGAAGAAC+TGG | + | chr1.1:80888640-80888659 | None:intergenic | 30.0% | |
| CAAATGTTGTAGATGTAGTT+AGG | - | chr1.1:80892417-80892436 | MS.gene75140:CDS | 30.0% | |
| CAGCTATGAAAACTAGAAAT+AGG | + | chr1.1:80892951-80892970 | None:intergenic | 30.0% | |
| CATATTACTTAGGTTCTGTT+TGG | + | chr1.1:80888187-80888206 | None:intergenic | 30.0% | |
| CCTATACAATATCTTAAAGC+TGG | - | chr1.1:80889550-80889569 | MS.gene75140:intron | 30.0% | |
| CTCGTGGATTTGATAAAAAA+AGG | - | chr1.1:80889287-80889306 | MS.gene75140:intron | 30.0% | |
| GAAAAGAACCTTACTTATCA+AGG | + | chr1.1:80888444-80888463 | None:intergenic | 30.0% | |
| GATTGCAATGAACAGAAAAA+TGG | + | chr1.1:80892164-80892183 | None:intergenic | 30.0% | |
| GCATAAAGTTTCATTGAATG+AGG | + | chr1.1:80891326-80891345 | None:intergenic | 30.0% | |
| GTATGTTCATAGTAGTTCTT+TGG | - | chr1.1:80890974-80890993 | MS.gene75140:intron | 30.0% | |
| GTTTCATCATTACTACAAGT+AGG | + | chr1.1:80887852-80887871 | None:intergenic | 30.0% | |
| TACAAATGTTGCAGTTATGA+AGG | - | chr1.1:80890592-80890611 | MS.gene75140:intron | 30.0% | |
| TCACATCATACAACTTTGAT+GGG | + | chr1.1:80891514-80891533 | None:intergenic | 30.0% | |
| TCAGCAATAAGAATACAAAC+AGG | + | chr1.1:80888331-80888350 | None:intergenic | 30.0% | |
| TCATGCTGATCAAGTTATAA+CGG | - | chr1.1:80887739-80887758 | MS.gene75140:intron | 30.0% | |
| TCCTCCAAAGTACATATTAT+TGG | - | chr1.1:80892987-80893006 | MS.gene75140:CDS | 30.0% | |
| TGGATTCAAATCAAAAAAGG+CGG | - | chr1.1:80890418-80890437 | MS.gene75140:CDS | 30.0% | |
| TTAGTACTAATTAGGGAAAG+AGG | + | chr1.1:80887787-80887806 | None:intergenic | 30.0% | |
| TTGAAGATTTCCAACAGAAT+TGG | + | chr1.1:80888566-80888585 | None:intergenic | 30.0% | |
| TTGTGTAAAAAAACAGGGTA+AGG | + | chr1.1:80889387-80889406 | None:intergenic | 30.0% | |
| TTGTTGAAAGGAATGAATGA+AGG | + | chr1.1:80887447-80887466 | None:intergenic | 30.0% | |
| TTTGAATCACTTATTCAAGC+TGG | - | chr1.1:80892304-80892323 | MS.gene75140:intron | 30.0% | |
| TTTGATAAAAAAAGGCAACC+TGG | - | chr1.1:80889295-80889314 | MS.gene75140:intron | 30.0% | |
| ! | AAAATTTGAAGTGGAGAACA+AGG | + | chr1.1:80889974-80889993 | None:intergenic | 30.0% |
| ! | AAATTTGAAGTGGAGAACAA+GGG | + | chr1.1:80889973-80889992 | None:intergenic | 30.0% |
| ! | AATAAGTTGAAAACTGTCCA+CGG | - | chr1.1:80888092-80888111 | MS.gene75140:CDS | 30.0% |
| ! | AGTTATTTCGTTATATGGTG+TGG | - | chr1.1:80891060-80891079 | MS.gene75140:intron | 30.0% |
| ! | CAGGAATTCTAAAAATGTTC+TGG | - | chr1.1:80888540-80888559 | MS.gene75140:intron | 30.0% |
| ! | TATGTATGCAGTAATTTGTG+GGG | - | chr1.1:80892459-80892478 | MS.gene75140:intron | 30.0% |
| ! | TTTGATTTATGGTTCATAGC+AGG | + | chr1.1:80892538-80892557 | None:intergenic | 30.0% |
| !! | CCAGCTTTAAGATATTGTAT+AGG | + | chr1.1:80889553-80889572 | None:intergenic | 30.0% |
| !! | GTTTGATTTGTAGTTCTTCT+TGG | - | chr1.1:80892640-80892659 | MS.gene75140:CDS | 30.0% |
| !! | TCAGCTGTTTTGTGATTATA+AGG | - | chr1.1:80891197-80891216 | MS.gene75140:intron | 30.0% |
| !! | TGTTTAAAACTCGGTGTATT+AGG | - | chr1.1:80891229-80891248 | MS.gene75140:intron | 30.0% |
| AAAAACATGGTTGATCTTGC+TGG | + | chr1.1:80891883-80891902 | None:intergenic | 35.0% | |
| AAAGCTATTCGGTATGATCT+GGG | - | chr1.1:80889810-80889829 | MS.gene75140:CDS | 35.0% | |
| AAAGGAATGAATGAAGGAGA+AGG | + | chr1.1:80887441-80887460 | None:intergenic | 35.0% | |
| AAAGTAGCAAACGATGGATA+AGG | - | chr1.1:80893055-80893074 | MS.gene75140:CDS | 35.0% | |
| AATAACTAATGACATGTCCG+TGG | + | chr1.1:80888112-80888131 | None:intergenic | 35.0% | |
| AATAGGTTTGGGAGAATTGA+CGG | + | chr1.1:80887361-80887380 | None:intergenic | 35.0% | |
| ACATACACAGAGTAATCTCA+TGG | - | chr1.1:80889080-80889099 | MS.gene75140:intron | 35.0% | |
| ACATTTAGATGGACAAAGCT+CGG | - | chr1.1:80891607-80891626 | MS.gene75140:intron | 35.0% | |
| AGAGAGATTTCAAAGAGTTG+TGG | + | chr1.1:80887296-80887315 | None:intergenic | 35.0% | |
| AGAGATCGAATGATACTATG+AGG | + | chr1.1:80890844-80890863 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAAAAC+AGG | + | chr1.1:80889393-80889412 | None:intergenic | 35.0% | |
| ATGTGGAAGGATATCAATCA+AGG | - | chr1.1:80891736-80891755 | MS.gene75140:CDS | 35.0% | |
| ATTCATCGAGTGTTACACAA+GGG | - | chr1.1:80893014-80893033 | MS.gene75140:CDS | 35.0% | |
| CAACCAGTTCTTCAACATAT+TGG | - | chr1.1:80888634-80888653 | MS.gene75140:intron | 35.0% | |
| CCACTTGATATTTATGAGGA+AGG | + | chr1.1:80891300-80891319 | None:intergenic | 35.0% | |
| CCTTCCTCATAAATATCAAG+TGG | - | chr1.1:80891297-80891316 | MS.gene75140:intron | 35.0% | |
| CGACACATCCATTTCAATAT+AGG | + | chr1.1:80888717-80888736 | None:intergenic | 35.0% | |
| CTATATTAACTGCTGAGTAC+AGG | + | chr1.1:80891390-80891409 | None:intergenic | 35.0% | |
| CTCAAAGTACAGAGCATAAT+TGG | + | chr1.1:80889766-80889785 | None:intergenic | 35.0% | |
| CTTCGTACTAGAACTAAAAG+TGG | - | chr1.1:80891930-80891949 | MS.gene75140:CDS | 35.0% | |
| GAGATAGTACTTGATGTTGA+TGG | - | chr1.1:80888598-80888617 | MS.gene75140:intron | 35.0% | |
| GAGATCGAATGATACTATGA+GGG | + | chr1.1:80890843-80890862 | None:intergenic | 35.0% | |
| GCAATGAACAGAAAAATGGT+CGG | + | chr1.1:80892160-80892179 | None:intergenic | 35.0% | |
| GCCTCTTGTGTAAAAAAACA+GGG | + | chr1.1:80889392-80889411 | None:intergenic | 35.0% | |
| GGATGTCTGTTGAGTTTATT+AGG | - | chr1.1:80890952-80890971 | MS.gene75140:intron | 35.0% | |
| GTCACATCATACAACTTTGA+TGG | + | chr1.1:80891515-80891534 | None:intergenic | 35.0% | |
| GTCATAAAACCTGAATTGAC+TGG | - | chr1.1:80889849-80889868 | MS.gene75140:CDS | 35.0% | |
| GTTCTACTGCATTTCGATTT+GGG | + | chr1.1:80892252-80892271 | None:intergenic | 35.0% | |
| GTTTGATGTTATGCTTGCTT+GGG | - | chr1.1:80887703-80887722 | MS.gene75140:intron | 35.0% | |
| TAAAGTTGTTGTCATGTGAC+TGG | + | chr1.1:80889443-80889462 | None:intergenic | 35.0% | |
| TAGTTTGAGGATTTGAGCAT+TGG | + | chr1.1:80888687-80888706 | None:intergenic | 35.0% | |
| TATTCATCGAGTGTTACACA+AGG | - | chr1.1:80893013-80893032 | MS.gene75140:CDS | 35.0% | |
| TCAGGGAATTCAAAGTAAAC+AGG | + | chr1.1:80890029-80890048 | None:intergenic | 35.0% | |
| TCATTGCAATCATTATGCTC+TGG | - | chr1.1:80892173-80892192 | MS.gene75140:intron | 35.0% | |
| TGTAGAAGAAATGGAAATCG+AGG | - | chr1.1:80887191-80887210 | MS.gene75140:CDS | 35.0% | |
| TGTAGTAATGATGAAACCGT+TGG | - | chr1.1:80887855-80887874 | MS.gene75140:intron | 35.0% | |
| TGTTCTACTGCATTTCGATT+TGG | + | chr1.1:80892253-80892272 | None:intergenic | 35.0% | |
| TTAAACATACTCTGATCTGC+TGG | + | chr1.1:80889586-80889605 | None:intergenic | 35.0% | |
| TTAGGTACACGAATGAACAA+GGG | + | chr1.1:80889694-80889713 | None:intergenic | 35.0% | |
| TTTAGGTACACGAATGAACA+AGG | + | chr1.1:80889695-80889714 | None:intergenic | 35.0% | |
| ! | AGCTTTGTCCATCTAAATGT+GGG | + | chr1.1:80891607-80891626 | None:intergenic | 35.0% |
| ! | GAAAGGTATGTTCCTTGTTT+AGG | - | chr1.1:80890931-80890950 | MS.gene75140:intron | 35.0% |
| ! | GCAAAATGGTGTCAAAAACA+TGG | + | chr1.1:80891896-80891915 | None:intergenic | 35.0% |
| ! | GCAAGTTCGCTTTAAATTCA+GGG | + | chr1.1:80890046-80890065 | None:intergenic | 35.0% |
| ! | TATAGGTATGCTCTAGTTTG+AGG | + | chr1.1:80888700-80888719 | None:intergenic | 35.0% |
| ! | TTCTACTGCATTTCGATTTG+GGG | + | chr1.1:80892251-80892270 | None:intergenic | 35.0% |
| ! | TTTCTTTTCTTGCACTCTTC+AGG | + | chr1.1:80893135-80893154 | None:intergenic | 35.0% |
| !! | AGAAATTAGAAGTACTTGCC+AGG | - | chr1.1:80890147-80890166 | MS.gene75140:CDS | 35.0% |
| !! | GAAATTAGAAGTACTTGCCA+GGG | - | chr1.1:80890148-80890167 | MS.gene75140:CDS | 35.0% |
| !! | GTTGATGATAAGAAGACAGT+TGG | - | chr1.1:80888280-80888299 | MS.gene75140:intron | 35.0% |
| !! | TAAAGTTGGCTTTCGTTGAT+TGG | - | chr1.1:80892078-80892097 | MS.gene75140:intron | 35.0% |
| !! | TTGTTGGCTGACTTTTTCTA+GGG | - | chr1.1:80889727-80889746 | MS.gene75140:CDS | 35.0% |
| !!! | ACCCTGTTTTTTTACACAAG+AGG | - | chr1.1:80889388-80889407 | MS.gene75140:intron | 35.0% |
| !!! | TGGAATCAGGTTTTTTGAGA+TGG | + | chr1.1:80887320-80887339 | None:intergenic | 35.0% |
| AAAAGCTCTTTCACTCCAAG+AGG | + | chr1.1:80887581-80887600 | None:intergenic | 40.0% | |
| AAACGTGAAACGACGAAACT+CGG | + | chr1.1:80887687-80887706 | None:intergenic | 40.0% | |
| AAATGGTCGGCAATAAGTAC+TGG | + | chr1.1:80892147-80892166 | None:intergenic | 40.0% | |
| AACATATTGGAATTGCCGCA+TGG | - | chr1.1:80888647-80888666 | MS.gene75140:intron | 40.0% | |
| AACCTGAACTGCCATATTTG+TGG | + | chr1.1:80887916-80887935 | None:intergenic | 40.0% | |
| AAGAAAATGGAGTCTACGTC+CGG | + | chr1.1:80888398-80888417 | None:intergenic | 40.0% | |
| AAGAGGAAGTTCGGAATCAA+AGG | + | chr1.1:80887564-80887583 | None:intergenic | 40.0% | |
| AAGCAGCAGTTGAATTCGTT+AGG | + | chr1.1:80890313-80890332 | None:intergenic | 40.0% | |
| AAGGCTTCTCAAGAAGACAA+TGG | - | chr1.1:80891021-80891040 | MS.gene75140:intron | 40.0% | |
| AAGTTGTATGATGTGACCAC+TGG | - | chr1.1:80891518-80891537 | MS.gene75140:intron | 40.0% | |
| AATGTTCTGGCCAATTCTGT+TGG | - | chr1.1:80888553-80888572 | MS.gene75140:intron | 40.0% | |
| AATTCGTTAGGCTGTTTGAC+AGG | + | chr1.1:80890301-80890320 | None:intergenic | 40.0% | |
| ACAGGTGAGTATTCTAGTCA+TGG | - | chr1.1:80892375-80892394 | MS.gene75140:intron | 40.0% | |
| ACTTGATCAGCATGAACACT+AGG | + | chr1.1:80887734-80887753 | None:intergenic | 40.0% | |
| AGAACCACATGGATAAAGAC+GGG | + | chr1.1:80891860-80891879 | None:intergenic | 40.0% | |
| AGAGAGTTGAGGAATAGGTT+TGG | + | chr1.1:80887373-80887392 | None:intergenic | 40.0% | |
| AGGCGTTAAGTTAGGAATGT+GGG | - | chr1.1:80887251-80887270 | MS.gene75140:CDS | 40.0% | |
| AGGGATTTATCTCACCAACT+CGG | + | chr1.1:80890481-80890500 | None:intergenic | 40.0% | |
| AGTACAGAGCATAATTGGTC+AGG | + | chr1.1:80889761-80889780 | None:intergenic | 40.0% | |
| AGTAGTGAGATACTGCTCAT+TGG | - | chr1.1:80888753-80888772 | MS.gene75140:intron | 40.0% | |
| AGTTGTATGATGTGACCACT+GGG | - | chr1.1:80891519-80891538 | MS.gene75140:intron | 40.0% | |
| ATAATCCTATTTGCCCACGA+GGG | + | chr1.1:80892784-80892803 | None:intergenic | 40.0% | |
| ATCAAATAGACGAGCACCAA+GGG | + | chr1.1:80889877-80889896 | None:intergenic | 40.0% | |
| ATCAAATCCACGAGATTGAG+GGG | + | chr1.1:80889484-80889503 | None:intergenic | 40.0% | |
| ATGACTAGAATACTCACCTG+TGG | + | chr1.1:80892376-80892395 | None:intergenic | 40.0% | |
| ATTCGTTAGGCTGTTTGACA+GGG | + | chr1.1:80890300-80890319 | None:intergenic | 40.0% | |
| CACAGATTTGTCAGGAAGTT+CGG | - | chr1.1:80890110-80890129 | MS.gene75140:CDS | 40.0% | |
| CATCAAATCCACGAGATTGA+GGG | + | chr1.1:80889485-80889504 | None:intergenic | 40.0% | |
| CATTTAGATGGACAAAGCTC+GGG | - | chr1.1:80891608-80891627 | MS.gene75140:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1.1:80889361-80889380 | None:intergenic | 40.0% | |
| CGTACTAGAACTAAAAGTGG+AGG | - | chr1.1:80891933-80891952 | MS.gene75140:CDS | 40.0% | |
| CGTTTGATGTTATGCTTGCT+TGG | - | chr1.1:80887702-80887721 | MS.gene75140:intron | 40.0% | |
| CTCAACAGACATCCTAAACA+AGG | + | chr1.1:80890946-80890965 | None:intergenic | 40.0% | |
| GAAAGCTATTCGGTATGATC+TGG | - | chr1.1:80889809-80889828 | MS.gene75140:CDS | 40.0% | |
| GAGAACCACATGGATAAAGA+CGG | + | chr1.1:80891861-80891880 | None:intergenic | 40.0% | |
| GAGAGTTGAGGAATAGGTTT+GGG | + | chr1.1:80887372-80887391 | None:intergenic | 40.0% | |
| GAGATTTCAAAGAGTTGTGG+TGG | + | chr1.1:80887293-80887312 | None:intergenic | 40.0% | |
| GCTTTGTCCATCTAAATGTG+GGG | + | chr1.1:80891606-80891625 | None:intergenic | 40.0% | |
| GTACAGAGCATAATTGGTCA+GGG | + | chr1.1:80889760-80889779 | None:intergenic | 40.0% | |
| GTGTGCATGAGAAAGCTATT+CGG | - | chr1.1:80889799-80889818 | MS.gene75140:CDS | 40.0% | |
| GTTGTTTGTGATATCCGAGT+TGG | - | chr1.1:80890464-80890483 | MS.gene75140:CDS | 40.0% | |
| TATCAAATAGACGAGCACCA+AGG | + | chr1.1:80889878-80889897 | None:intergenic | 40.0% | |
| TCAAAGAGTTGTGGTGGTTA+CGG | + | chr1.1:80887287-80887306 | None:intergenic | 40.0% | |
| TCACGTAGCATATTTGCAAC+AGG | + | chr1.1:80889937-80889956 | None:intergenic | 40.0% | |
| TCAGGCTTAACAAGTTCAAC+AGG | + | chr1.1:80893117-80893136 | None:intergenic | 40.0% | |
| TCTATAGAAGTCTTTCCACG+AGG | + | chr1.1:80891158-80891177 | None:intergenic | 40.0% | |
| TGGCGTAGACATTTCAGAAA+GGG | - | chr1.1:80892193-80892212 | MS.gene75140:intron | 40.0% | |
| TGGGAATAGTAGTTCCTACA+AGG | + | chr1.1:80891101-80891120 | None:intergenic | 40.0% | |
| TGTTGAAGAACTGGTTGAGT+CGG | + | chr1.1:80888631-80888650 | None:intergenic | 40.0% | |
| TTCCACAAATATGGCAGTTC+AGG | - | chr1.1:80887911-80887930 | MS.gene75140:intron | 40.0% | |
| TTTCACTCCAAGAGGAAGTT+CGG | + | chr1.1:80887573-80887592 | None:intergenic | 40.0% | |
| TTTGATTCCGAACTTCCTCT+TGG | - | chr1.1:80887563-80887582 | MS.gene75140:intron | 40.0% | |
| ! | AATGTTTCTACTGGGAAGCT+AGG | + | chr1.1:80888813-80888832 | None:intergenic | 40.0% |
| ! | CGCAAGTTCGCTTTAAATTC+AGG | + | chr1.1:80890047-80890066 | None:intergenic | 40.0% |
| ! | CTGAGGGAAATGTTTCTACT+GGG | + | chr1.1:80888821-80888840 | None:intergenic | 40.0% |
| ! | CTTCGTATTTTGCGTTTTGC+AGG | - | chr1.1:80887504-80887523 | MS.gene75140:intron | 40.0% |
| ! | GAGCTTTGTCCATCTAAATG+TGG | + | chr1.1:80891608-80891627 | None:intergenic | 40.0% |
| ! | GCATTTTCCCCACATTTAGA+TGG | - | chr1.1:80891596-80891615 | MS.gene75140:intron | 40.0% |
| ! | TGCTAACCGACTACAACTTT+TGG | - | chr1.1:80891132-80891151 | MS.gene75140:intron | 40.0% |
| ! | TTTGCGTTTTGCAGGATTCT+TGG | - | chr1.1:80887512-80887531 | MS.gene75140:intron | 40.0% |
| !! | AGTTGGTGAGATAAATCCCT+TGG | - | chr1.1:80890481-80890500 | MS.gene75140:CDS | 40.0% |
| !! | ATAAGCATTGAGACCGATTC+TGG | + | chr1.1:80888136-80888155 | None:intergenic | 40.0% |
| !! | GGTGCCACTTGATATTTATG+AGG | + | chr1.1:80891304-80891323 | None:intergenic | 40.0% |
| !! | GTTGTTGGCTGACTTTTTCT+AGG | - | chr1.1:80889726-80889745 | MS.gene75140:CDS | 40.0% |
| !! | TAACTCGCTCTGAGAAAACA+GGG | + | chr1.1:80888505-80888524 | None:intergenic | 40.0% |
| !! | TAAGAAGACAGTTGGTCTTG+AGG | - | chr1.1:80888288-80888307 | MS.gene75140:intron | 40.0% |
| !! | TCTACTGCATTTCGATTTGG+GGG | + | chr1.1:80892250-80892269 | None:intergenic | 40.0% |
| !! | TCTACTTGCTATATTGCCAC+AGG | - | chr1.1:80892357-80892376 | MS.gene75140:intron | 40.0% |
| !! | TTGCTACTTTCTCTCCTACA+TGG | + | chr1.1:80893045-80893064 | None:intergenic | 40.0% |
| AAACAATCCCTTCTGGACAC+TGG | - | chr1.1:80890515-80890534 | MS.gene75140:CDS | 45.0% | |
| AAGCCAAGCAACTGCTTGAA+TGG | + | chr1.1:80888968-80888987 | None:intergenic | 45.0% | |
| AAGCTGAGCAACTGCTTGAA+TGG | + | chr1.1:80889158-80889177 | None:intergenic | 45.0% | |
| ACATACACGGTGTAATCTCG+TGG | - | chr1.1:80889271-80889290 | MS.gene75140:intron | 45.0% | |
| ACCTAGCTGAAACTCTACCT+CGG | - | chr1.1:80890255-80890274 | MS.gene75140:CDS | 45.0% | |
| ACGAGGCCAAAAGTTGTAGT+CGG | + | chr1.1:80891141-80891160 | None:intergenic | 45.0% | |
| AGAATGAGACTTGGAAGAGG+TGG | + | chr1.1:80887418-80887437 | None:intergenic | 45.0% | |
| AGAATTGACGGAGGAGTGAT+CGG | + | chr1.1:80887349-80887368 | None:intergenic | 45.0% | |
| AGACCATTCAAGCAGTTGCT+TGG | - | chr1.1:80888962-80888981 | MS.gene75140:intron | 45.0% | |
| AGCATCATCCTCATCACCAA+CGG | + | chr1.1:80887874-80887893 | None:intergenic | 45.0% | |
| AGCTCGGGTTCATCACTATT+TGG | - | chr1.1:80891623-80891642 | MS.gene75140:intron | 45.0% | |
| AGGAGAAGGAGAATGAGACT+TGG | + | chr1.1:80887427-80887446 | None:intergenic | 45.0% | |
| AGGAGAATGAGACTTGGAAG+AGG | + | chr1.1:80887421-80887440 | None:intergenic | 45.0% | |
| AGTACTTGCCAGGGCTAATT+TGG | - | chr1.1:80890157-80890176 | MS.gene75140:CDS | 45.0% | |
| AGTGAGATACTGCTCATTGG+TGG | - | chr1.1:80888756-80888775 | MS.gene75140:intron | 45.0% | |
| ATGGGAGAGAGTTGAGGAAT+AGG | + | chr1.1:80887378-80887397 | None:intergenic | 45.0% | |
| ATGTCAGGCATAGGAGAGAA+GGG | + | chr1.1:80891801-80891820 | None:intergenic | 45.0% | |
| CAGCACCAGAGAATACCAAT+GGG | - | chr1.1:80890780-80890799 | MS.gene75140:intron | 45.0% | |
| CATAATCCTATTTGCCCACG+AGG | + | chr1.1:80892785-80892804 | None:intergenic | 45.0% | |
| CATGGATAAAGACGGGATCA+AGG | + | chr1.1:80891853-80891872 | None:intergenic | 45.0% | |
| CCGCTTTATCGTCACTTCTA+CGG | - | chr1.1:80892702-80892721 | MS.gene75140:CDS | 45.0% | |
| CCGTAGAAGTGACGATAAAG+CGG | + | chr1.1:80892705-80892724 | None:intergenic | 45.0% | |
| CGCTTTATCGTCACTTCTAC+GGG | - | chr1.1:80892703-80892722 | MS.gene75140:CDS | 45.0% | |
| CGTAGAAGTGACGATAAAGC+GGG | + | chr1.1:80892704-80892723 | None:intergenic | 45.0% | |
| CGTAGACATTTCAGAAAGGG+AGG | - | chr1.1:80892196-80892215 | MS.gene75140:intron | 45.0% | |
| CTGGCGTAGACATTTCAGAA+AGG | - | chr1.1:80892192-80892211 | MS.gene75140:intron | 45.0% | |
| CTGGGTCACAATCTTTAAGC+TGG | - | chr1.1:80891537-80891556 | MS.gene75140:intron | 45.0% | |
| GCATCAAATCCACGAGATTG+AGG | + | chr1.1:80889486-80889505 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1.1:80889362-80889381 | None:intergenic | 45.0% | |
| GCTCTGTACTTTGAGTCACT+TGG | - | chr1.1:80889771-80889790 | MS.gene75140:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1.1:80889365-80889384 | None:intergenic | 45.0% | |
| GCTTAAAGATTGTGACCCAG+TGG | + | chr1.1:80891537-80891556 | None:intergenic | 45.0% | |
| GGAGAGAAAGTAGCAAACGA+TGG | - | chr1.1:80893049-80893068 | MS.gene75140:CDS | 45.0% | |
| GGATAAGGCGGTTTAGAGAA+TGG | - | chr1.1:80893070-80893089 | MS.gene75140:CDS | 45.0% | |
| GGCAGTAAAACAATCCCTTC+TGG | - | chr1.1:80890508-80890527 | MS.gene75140:CDS | 45.0% | |
| GGTTAGCAGATTCGATGACT+GGG | + | chr1.1:80891120-80891139 | None:intergenic | 45.0% | |
| GTACTTGCCAGGGCTAATTT+GGG | - | chr1.1:80890158-80890177 | MS.gene75140:CDS | 45.0% | |
| GTAGCAAACGATGGATAAGG+CGG | - | chr1.1:80893058-80893077 | MS.gene75140:CDS | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | + | chr1.1:80889439-80889458 | None:intergenic | 45.0% | |
| TAAGGCGGTTTAGAGAATGG+TGG | - | chr1.1:80893073-80893092 | MS.gene75140:CDS | 45.0% | |
| TAATCCTATTTGCCCACGAG+GGG | + | chr1.1:80892783-80892802 | None:intergenic | 45.0% | |
| TACCTAGCAAGATCTCATCC+CGG | + | chr1.1:80892755-80892774 | None:intergenic | 45.0% | |
| TACGTGCACACAGATTTGTC+AGG | - | chr1.1:80890102-80890121 | MS.gene75140:CDS | 45.0% | |
| TACTTTGAGTCACTTGGCGT+TGG | - | chr1.1:80889777-80889796 | MS.gene75140:CDS | 45.0% | |
| TATGCCTGACATCCTCATGA+AGG | - | chr1.1:80891809-80891828 | MS.gene75140:intron | 45.0% | |
| TCAAATAGACGAGCACCAAG+GGG | + | chr1.1:80889876-80889895 | None:intergenic | 45.0% | |
| TCAGCACCAGAGAATACCAA+TGG | - | chr1.1:80890779-80890798 | MS.gene75140:intron | 45.0% | |
| TGAGATAAATCCCTTGGACG+TGG | - | chr1.1:80890487-80890506 | MS.gene75140:CDS | 45.0% | |
| TGAGCGCATCGAAAAGATTG+TGG | + | chr1.1:80888366-80888385 | None:intergenic | 45.0% | |
| TGATCCCGTCTTTATCCATG+TGG | - | chr1.1:80891853-80891872 | MS.gene75140:intron | 45.0% | |
| TTACATTGATGTACAGGGGG+TGG | - | chr1.1:80892119-80892138 | MS.gene75140:intron | 45.0% | |
| TTATGAGGAAGGCAGCCAAT+CGG | + | chr1.1:80891289-80891308 | None:intergenic | 45.0% | |
| TTCATGAGGATGTCAGGCAT+AGG | + | chr1.1:80891810-80891829 | None:intergenic | 45.0% | |
| TTGATCAGCGTCTTCTACGA+CGG | + | chr1.1:80889611-80889630 | None:intergenic | 45.0% | |
| ! | ACACATGTTTTCAACCACCC+GGG | - | chr1.1:80892734-80892753 | MS.gene75140:CDS | 45.0% |
| ! | ACGAATTCAACTGCTGCTTC+TGG | - | chr1.1:80890314-80890333 | MS.gene75140:intron | 45.0% |
| ! | CACACATGTTTTCAACCACC+CGG | - | chr1.1:80892733-80892752 | MS.gene75140:CDS | 45.0% |
| ! | GAGGCGTTAAGTTAGGAATG+TGG | - | chr1.1:80887250-80887269 | MS.gene75140:CDS | 45.0% |
| ! | GATTTAGAACCTCAGCCCAT+TGG | + | chr1.1:80890798-80890817 | None:intergenic | 45.0% |
| ! | GCTGAGGGAAATGTTTCTAC+TGG | + | chr1.1:80888822-80888841 | None:intergenic | 45.0% |
| ! | TGCTTTTCCAGTGTCCAGAA+GGG | + | chr1.1:80890525-80890544 | None:intergenic | 45.0% |
| ! | TGTTTTACTGCCACGTCCAA+GGG | + | chr1.1:80890500-80890519 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1.1:80889399-80889418 | MS.gene75140:intron | 45.0% |
| ! | TTGGTATTCTCTGGTGCTGA+AGG | + | chr1.1:80890779-80890798 | None:intergenic | 45.0% |
| !! | AGTGACGATAAAGCGGGTTA+TGG | + | chr1.1:80892698-80892717 | None:intergenic | 45.0% |
| !! | GAGCATTGGAAATACTCACC+AGG | + | chr1.1:80888673-80888692 | None:intergenic | 45.0% |
| !! | GTAACTCGCTCTGAGAAAAC+AGG | + | chr1.1:80888506-80888525 | None:intergenic | 45.0% |
| !! | TGATCGGTGATGATGGAATC+AGG | + | chr1.1:80887333-80887352 | None:intergenic | 45.0% |
| !! | TGATGAAACCGTTGGTGATG+AGG | - | chr1.1:80887863-80887882 | MS.gene75140:intron | 45.0% |
| !! | TTGTTTTACTGCCACGTCCA+AGG | + | chr1.1:80890501-80890520 | None:intergenic | 45.0% |
| AAACTCTACCTCGGGGAGAT+AGG | - | chr1.1:80890264-80890283 | MS.gene75140:CDS | 50.0% | |
| AACTGTGGACCAAGTGAAGG+TGG | - | chr1.1:80890559-80890578 | MS.gene75140:intron | 50.0% | |
| AAGAGTTGTGGTGGTTACGG+AGG | + | chr1.1:80887284-80887303 | None:intergenic | 50.0% | |
| AAGGTTACCCCTCAATCTCG+TGG | - | chr1.1:80889474-80889493 | MS.gene75140:intron | 50.0% | |
| AAGTCTTGCATCTGTCCTGC+AGG | - | chr1.1:80892909-80892928 | MS.gene75140:CDS | 50.0% | |
| AATCCTATTTGCCCACGAGG+GGG | + | chr1.1:80892782-80892801 | None:intergenic | 50.0% | |
| ACAAGTTCAACAGGAGCAGC+AGG | + | chr1.1:80893108-80893127 | None:intergenic | 50.0% | |
| ACACAAGGGAGATGCCATGT+AGG | - | chr1.1:80893028-80893047 | MS.gene75140:CDS | 50.0% | |
| ACCTAGCAAGATCTCATCCC+GGG | + | chr1.1:80892754-80892773 | None:intergenic | 50.0% | |
| ACGAGATTGAGGGGTAACCT+TGG | + | chr1.1:80889475-80889494 | None:intergenic | 50.0% | |
| ACTTTGATGGGACAACGCAG+AGG | + | chr1.1:80891502-80891521 | None:intergenic | 50.0% | |
| AGGTTTGGGAGAATTGACGG+AGG | + | chr1.1:80887358-80887377 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr1.1:80889455-80889474 | MS.gene75140:intron | 50.0% | |
| CCTAGCTGAAACTCTACCTC+GGG | - | chr1.1:80890256-80890275 | MS.gene75140:CDS | 50.0% | |
| CGGTTAGCAGATTCGATGAC+TGG | + | chr1.1:80891121-80891140 | None:intergenic | 50.0% | |
| CTAGCTGAAACTCTACCTCG+GGG | - | chr1.1:80890257-80890276 | MS.gene75140:CDS | 50.0% | |
| CTCAGCCCATTGGTATTCTC+TGG | + | chr1.1:80890788-80890807 | None:intergenic | 50.0% | |
| CTTCTTTGAGTGCGCGATAG+CGG | + | chr1.1:80890190-80890209 | None:intergenic | 50.0% | |
| GAAATACTCACCAGGCCATG+CGG | + | chr1.1:80888665-80888684 | None:intergenic | 50.0% | |
| GAAGATGCCCAAATTAGCCC+TGG | + | chr1.1:80890168-80890187 | None:intergenic | 50.0% | |
| GAGTCTACGTCCGGAAGAAT+TGG | + | chr1.1:80888389-80888408 | None:intergenic | 50.0% | |
| GATCTTGCTGGAGAACCACA+TGG | + | chr1.1:80891871-80891890 | None:intergenic | 50.0% | |
| GATGCGCTCACCAATTCTTC+CGG | - | chr1.1:80888376-80888395 | MS.gene75140:intron | 50.0% | |
| GATGTCAGGCATAGGAGAGA+AGG | + | chr1.1:80891802-80891821 | None:intergenic | 50.0% | |
| GATGTGCTTGAGCCTTCATG+AGG | + | chr1.1:80891824-80891843 | None:intergenic | 50.0% | |
| GTCATGTGACTGGAAGGTCA+CGG | + | chr1.1:80889433-80889452 | None:intergenic | 50.0% | |
| GTTACGTGTGCAGGGTTATC+AGG | - | chr1.1:80888521-80888540 | MS.gene75140:intron | 50.0% | |
| TAACTTAACGCCTCCGTTGG+TGG | + | chr1.1:80887244-80887263 | None:intergenic | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | + | chr1.1:80889432-80889451 | None:intergenic | 50.0% | |
| TCCTAACTTAACGCCTCCGT+TGG | + | chr1.1:80887247-80887266 | None:intergenic | 50.0% | |
| TGAACAGAATGTCTGCCACC+TGG | - | chr1.1:80892018-80892037 | MS.gene75140:CDS | 50.0% | |
| TGAGCCTTCATGAGGATGTC+AGG | + | chr1.1:80891816-80891835 | None:intergenic | 50.0% | |
| TGGAAAAGCAGAAGCTGCAC+AGG | - | chr1.1:80890535-80890554 | MS.gene75140:CDS | 50.0% | |
| TGGCGTCTAATGCCCAACAA+TGG | - | chr1.1:80891557-80891576 | MS.gene75140:intron | 50.0% | |
| TGTCAGGCATAGGAGAGAAG+GGG | + | chr1.1:80891800-80891819 | None:intergenic | 50.0% | |
| ! | GACTACAACTTTTGGCCTCG+TGG | - | chr1.1:80891140-80891159 | MS.gene75140:intron | 50.0% |
| !! | ACCAACGGAGGCGTTAAGTT+AGG | - | chr1.1:80887243-80887262 | MS.gene75140:CDS | 50.0% |
| !! | ACTGCATTTCGATTTGGGGG+AGG | + | chr1.1:80892247-80892266 | None:intergenic | 50.0% |
| !! | CAGAGAATACCAATGGGCTG+AGG | - | chr1.1:80890786-80890805 | MS.gene75140:intron | 50.0% |
| !! | CTGCTTTTCCAGTGTCCAGA+AGG | + | chr1.1:80890526-80890545 | None:intergenic | 50.0% |
| !! | GACGATAAAGCGGGTTATGG+AGG | + | chr1.1:80892695-80892714 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1.1:80889420-80889439 | None:intergenic | 55.0% | |
| ACCCGGGATGAGATCTTGCT+AGG | - | chr1.1:80892750-80892769 | MS.gene75140:CDS | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr1.1:80889321-80889340 | MS.gene75140:intron | 55.0% | |
| AGAAGCTGCACAGGCAACTG+TGG | - | chr1.1:80890544-80890563 | MS.gene75140:CDS | 55.0% | |
| AGAGGTGGAGACGACTTCGT+TGG | + | chr1.1:80887403-80887422 | None:intergenic | 55.0% | |
| ATCAGCAGTGTCTCCTGCAG+CGG | - | chr1.1:80890376-80890395 | MS.gene75140:intron | 55.0% | |
| ATTGGAATTGCCGCATGGCC+TGG | - | chr1.1:80888652-80888671 | MS.gene75140:intron | 55.0% | |
| CAACTGTCTCTGTAGCCTGC+AGG | + | chr1.1:80892927-80892946 | None:intergenic | 55.0% | |
| CAGAGCGAGTTACGTGTGCA+GGG | - | chr1.1:80888513-80888532 | MS.gene75140:intron | 55.0% | |
| CCAAGGGGTCCAGTCAATTC+AGG | + | chr1.1:80889861-80889880 | None:intergenic | 55.0% | |
| CCCGAGGTAGAGTTTCAGCT+AGG | + | chr1.1:80890259-80890278 | None:intergenic | 55.0% | |
| CCTGAATTGACTGGACCCCT+TGG | - | chr1.1:80889858-80889877 | MS.gene75140:CDS | 55.0% | |
| CGAACTTGCGACGTGACTAC+TGG | - | chr1.1:80890057-80890076 | MS.gene75140:CDS | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr1.1:80889322-80889341 | MS.gene75140:intron | 55.0% | |
| CTTGCGACGTGACTACTGGT+TGG | - | chr1.1:80890061-80890080 | MS.gene75140:CDS | 55.0% | |
| GAGACGACTTCGTTGGCGAT+GGG | + | chr1.1:80887396-80887415 | None:intergenic | 55.0% | |
| GGAGGAGTGATCGGTGATGA+TGG | + | chr1.1:80887340-80887359 | None:intergenic | 55.0% | |
| GGCAACTGTGGACCAAGTGA+AGG | - | chr1.1:80890556-80890575 | MS.gene75140:intron | 55.0% | |
| GGGGGAGGTCTTACTGTGAA+GGG | + | chr1.1:80892232-80892251 | None:intergenic | 55.0% | |
| GTAGTGGCACTCTTCGGTCT+TGG | - | chr1.1:80890398-80890417 | MS.gene75140:CDS | 55.0% | |
| GTGGACCAAGTGAAGGTGGA+GGG | - | chr1.1:80890563-80890582 | MS.gene75140:intron | 55.0% | |
| TAGCAAGATCTCATCCCGGG+TGG | + | chr1.1:80892751-80892770 | None:intergenic | 55.0% | |
| TAGCTGTCACTGTCTGCTCC+AGG | + | chr1.1:80892039-80892058 | None:intergenic | 55.0% | |
| TCAGAGCGAGTTACGTGTGC+AGG | - | chr1.1:80888512-80888531 | MS.gene75140:intron | 55.0% | |
| TCTGGGCGCAGACATGAAAC+AGG | - | chr1.1:80889827-80889846 | MS.gene75140:CDS | 55.0% | |
| TGCAAGATCCTATCTCCCCG+AGG | + | chr1.1:80890275-80890294 | None:intergenic | 55.0% | |
| TGGGGGAGGTCTTACTGTGA+AGG | + | chr1.1:80892233-80892252 | None:intergenic | 55.0% | |
| TGTGGACCAAGTGAAGGTGG+AGG | - | chr1.1:80890562-80890581 | MS.gene75140:intron | 55.0% | |
| TTGGCGATGGGAGAGAGTTG+AGG | + | chr1.1:80887384-80887403 | None:intergenic | 55.0% | |
| ACCACCACCACCACCACCAA+CGG | - | chr1.1:80887228-80887247 | MS.gene75140:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr1.1:80889466-80889485 | None:intergenic | 60.0% | |
| AGTGTCTCCTGCAGCGGTAG+TGG | - | chr1.1:80890382-80890401 | MS.gene75140:intron | 60.0% | |
| CGATGCCCTCCACCTTCACT+TGG | + | chr1.1:80890571-80890590 | None:intergenic | 60.0% | |
| CTACCCCCTCGTGGGCAAAT+AGG | - | chr1.1:80892776-80892795 | MS.gene75140:intron | 60.0% | |
| CTAGGTAGCTACCCCCTCGT+GGG | - | chr1.1:80892768-80892787 | MS.gene75140:CDS | 60.0% | |
| CTGTCACTGTCTGCTCCAGG+TGG | + | chr1.1:80892036-80892055 | None:intergenic | 60.0% | |
| GGAGACGACTTCGTTGGCGA+TGG | + | chr1.1:80887397-80887416 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1.1:80889349-80889368 | None:intergenic | 60.0% |
| ! | CTTAACGCCTCCGTTGGTGG+TGG | + | chr1.1:80887241-80887260 | None:intergenic | 60.0% |
| ! | GCAGCGGTAGTGGCACTCTT+CGG | - | chr1.1:80890392-80890411 | MS.gene75140:CDS | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+AGG | + | chr1.1:80889316-80889335 | None:intergenic | 60.0% |
| !! | AAGAGTGCCACTACCGCTGC+AGG | + | chr1.1:80890392-80890411 | None:intergenic | 60.0% |
| ACCACCACCACCACCAACGG+AGG | - | chr1.1:80887231-80887250 | MS.gene75140:CDS | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr1.1:80889334-80889353 | MS.gene75140:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1.1:80889347-80889366 | MS.gene75140:intron | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr1.1:80889334-80889353 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr1.1:80889333-80889352 | MS.gene75140:intron | 65.0% | |
| GCTAGGTAGCTACCCCCTCG+TGG | - | chr1.1:80892767-80892786 | MS.gene75140:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr1.1:80889333-80889352 | None:intergenic | 65.0% | |
| !! | AACGCCTCCGTTGGTGGTGG+TGG | + | chr1.1:80887238-80887257 | None:intergenic | 65.0% |
| !! | GTTGGTGGTGGTGGTGGTGG+TGG | + | chr1.1:80887229-80887248 | None:intergenic | 65.0% |
| !! | TCCGTTGGTGGTGGTGGTGG+TGG | + | chr1.1:80887232-80887251 | None:intergenic | 65.0% |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr1.1:80889332-80889351 | MS.gene75140:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr1.1:80889328-80889347 | MS.gene75140:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr1.1:80889327-80889346 | MS.gene75140:intron | 70.0% | |
| !! | GCCTCCGTTGGTGGTGGTGG+TGG | + | chr1.1:80887235-80887254 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr1.1:80887220-80887239 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 80887159 | 80893158 | 80887159 | ID=MS.gene75140 |
| chr1.1 | mRNA | 80887159 | 80893158 | 80887159 | ID=MS.gene75140.t1;Parent=MS.gene75140 |
| chr1.1 | exon | 80892890 | 80893158 | 80892890 | ID=MS.gene75140.t1.exon1;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80892890 | 80893158 | 80892890 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80892566 | 80892791 | 80892566 | ID=MS.gene75140.t1.exon2;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80892566 | 80892791 | 80892566 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80892385 | 80892474 | 80892385 | ID=MS.gene75140.t1.exon3;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80892385 | 80892474 | 80892385 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80891868 | 80892037 | 80891868 | ID=MS.gene75140.t1.exon4;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80891868 | 80892037 | 80891868 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80891644 | 80891783 | 80891644 | ID=MS.gene75140.t1.exon5;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80891644 | 80891783 | 80891644 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80890392 | 80890569 | 80890392 | ID=MS.gene75140.t1.exon6;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80890392 | 80890569 | 80890392 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80889704 | 80890298 | 80889704 | ID=MS.gene75140.t1.exon7;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80889704 | 80890298 | 80889704 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80889099 | 80889211 | 80889099 | ID=MS.gene75140.t1.exon8;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80889099 | 80889211 | 80889099 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80887939 | 80888182 | 80887939 | ID=MS.gene75140.t1.exon9;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80887939 | 80888182 | 80887939 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| chr1.1 | exon | 80887159 | 80887386 | 80887159 | ID=MS.gene75140.t1.exon10;Parent=MS.gene75140.t1 |
| chr1.1 | CDS | 80887159 | 80887386 | 80887159 | ID=cds.MS.gene75140.t1;Parent=MS.gene75140.t1 |
| Gene Sequence |
| Protein sequence |
