Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75202.t1 | XP_013470142.1 | 97.6 | 708 | 17 | 0 | 1 | 708 | 127 | 834 | 0.00E+00 | 1432.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75202.t1 | F4I1S7 | 63.1 | 719 | 243 | 12 | 1 | 707 | 127 | 835 | 8.1e-267 | 921.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75202.t1 | A0A072W1L5 | 97.6 | 708 | 17 | 0 | 1 | 708 | 127 | 834 | 0.0e+00 | 1432.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene75202 | 0.853568 | 2.19E-61 | -1.69E-46 |
| MS.gene056228 | MS.gene75202 | 0.803084 | 4.13E-49 | -1.69E-46 |
| MS.gene05638 | MS.gene75202 | 0.819089 | 1.39E-52 | -1.69E-46 |
| MS.gene059154 | MS.gene75202 | 0.81869 | 1.72E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75202.t1 | MTR_1g109490 | 97.324 | 710 | 19 | 0 | 1 | 710 | 127 | 836 | 0.0 | 1430 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75202.t1 | AT1G49540 | 62.881 | 722 | 246 | 12 | 1 | 710 | 127 | 838 | 0.0 | 917 |
| MS.gene75202.t1 | AT1G49540 | 62.881 | 722 | 246 | 12 | 1 | 710 | 129 | 840 | 0.0 | 917 |
Find 190 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACAAACATCCAGATTT+TGG | 0.080849 | 1.3:-74492540 | MS.gene75202:CDS |
| CAGATGGTACTGTTTGTATA+TGG | 0.208305 | 1.3:-74494676 | MS.gene75202:CDS |
| ACCTCTCCATTGATGCTTAC+AGG | 0.211910 | 1.3:+74494191 | None:intergenic |
| AACTAACCTTGGGCATAAAT+AGG | 0.234409 | 1.3:+74492482 | None:intergenic |
| AAGACAAATGCATACGAATT+TGG | 0.242871 | 1.3:-74494139 | MS.gene75202:CDS |
| ATGGTGGATCGTTCCATCTT+TGG | 0.278484 | 1.3:-74493725 | MS.gene75202:CDS |
| GTACATTCATGTGAGCTAAA+AGG | 0.291991 | 1.3:-74494251 | MS.gene75202:CDS |
| GCTAAAATTGAATCTCCATT+TGG | 0.295581 | 1.3:+74493756 | None:intergenic |
| ACAGACTCCACAACTCTATT+TGG | 0.297076 | 1.3:+74489734 | None:intergenic |
| TCCAATCAAAAGAGATTCTA+AGG | 0.303182 | 1.3:+74493995 | None:intergenic |
| CCATAGAGTTTATGTGATTC+AGG | 0.311737 | 1.3:+74491140 | None:intergenic |
| TACAGATTGGATCCGGAGTT+TGG | 0.311793 | 1.3:-74494225 | MS.gene75202:CDS |
| TCCATCCTCTTGTCTGTTAT+AGG | 0.312730 | 1.3:+74489711 | None:intergenic |
| TTCTTTATGCTGTGATCATA+AGG | 0.318251 | 1.3:-74491099 | MS.gene75202:CDS |
| ACATATTTGCACCCAAAATC+TGG | 0.321358 | 1.3:+74492528 | None:intergenic |
| GGATTATCTGGTCATGTTCT+TGG | 0.328711 | 1.3:-74489951 | MS.gene75202:CDS |
| TTCCGTTGGTTCTAAATCTA+TGG | 0.332083 | 1.3:-74494499 | MS.gene75202:CDS |
| CACTGTGCTCTGGGATTCTA+TGG | 0.332419 | 1.3:-74493792 | MS.gene75202:CDS |
| GCGACAAGACAGTGAAAATC+TGG | 0.332615 | 1.3:-74489894 | MS.gene75202:CDS |
| AATGCTTTGTGGTTGATAAC+AGG | 0.332640 | 1.3:+74493908 | None:intergenic |
| TGGCGACAAAGATACCTTTC+CGG | 0.344773 | 1.3:+74494377 | None:intergenic |
| TAAATAGGTCGAGTTACTTA+TGG | 0.352568 | 1.3:-74489351 | MS.gene75202:intron |
| GTAGAGGCATGACATATAAA+AGG | 0.354208 | 1.3:+74489640 | None:intergenic |
| ACATGAGGATTGGGTATATT+CGG | 0.356150 | 1.3:-74493973 | MS.gene75202:CDS |
| GGCTTTGGCAGGTTGGTTCA+TGG | 0.357324 | 1.3:-74490725 | MS.gene75202:CDS |
| ATTCCATCATTTCTTCGATT+GGG | 0.357838 | 1.3:+74489781 | None:intergenic |
| GCTGTCACACTACTCGTAAA+TGG | 0.364831 | 1.3:+74489823 | None:intergenic |
| TGGCAGCCTGAAAAGACTTC+TGG | 0.377252 | 1.3:-74493852 | MS.gene75202:CDS |
| CCTGAATCACATAAACTCTA+TGG | 0.383126 | 1.3:-74491140 | MS.gene75202:CDS |
| GTGAACCTGTTGCAAATTCA+TGG | 0.386968 | 1.3:+74489917 | None:intergenic |
| GCTTGTTGCTTCTTCATGTA+AGG | 0.391628 | 1.3:-74491072 | MS.gene75202:intron |
| CTACTGCTGTGGCAGAAGTA+TGG | 0.394606 | 1.3:-74490746 | MS.gene75202:CDS |
| TATGACAGTTGTTCATAGTA+AGG | 0.395282 | 1.3:-74492684 | MS.gene75202:CDS |
| CTAAAATTGAATCTCCATTT+GGG | 0.396876 | 1.3:+74493757 | None:intergenic |
| CGAACTAAGCCACTGTGCTC+TGG | 0.400762 | 1.3:-74493802 | MS.gene75202:CDS |
| TTCTGCCACAGCAGTAGATT+GGG | 0.401219 | 1.3:+74490752 | None:intergenic |
| TACATTCATGTGAGCTAAAA+GGG | 0.406622 | 1.3:-74494250 | MS.gene75202:CDS |
| AATTCCATCATTTCTTCGAT+TGG | 0.407892 | 1.3:+74489780 | None:intergenic |
| ACCTCCAATTGAAGATCAAC+TGG | 0.411643 | 1.3:-74491180 | MS.gene75202:CDS |
| TCTGATACAAATGGGGTTGA+TGG | 0.415325 | 1.3:-74491254 | MS.gene75202:CDS |
| CTTCTGCCACAGCAGTAGAT+TGG | 0.418879 | 1.3:+74490751 | None:intergenic |
| ATTGCGCGGCCTCAGGTTCA+TGG | 0.422152 | 1.3:-74492722 | MS.gene75202:CDS |
| TGGGATTCTATGGTGGTCAT+TGG | 0.423535 | 1.3:-74493782 | MS.gene75202:CDS |
| TTATAGTCTTCTTGCGAGGC+AGG | 0.424206 | 1.3:-74489986 | MS.gene75202:CDS |
| TCTTTATGCTGTGATCATAA+GGG | 0.426565 | 1.3:-74491098 | MS.gene75202:CDS |
| TTATCGATGGCGGAATTGCC+TGG | 0.427069 | 1.3:-74494471 | MS.gene75202:CDS |
| GAAGAGCCAGCCACAAGGAC+AGG | 0.427978 | 1.3:+74494032 | None:intergenic |
| TCATTACCTGTAAGCATCAA+TGG | 0.428341 | 1.3:-74494197 | MS.gene75202:CDS |
| GTATGAGATTGCGCGGCCTC+AGG | 0.431270 | 1.3:-74492729 | MS.gene75202:CDS |
| AGCTAAAAGGGCATACAGAT+TGG | 0.432748 | 1.3:-74494238 | MS.gene75202:CDS |
| TACAAATGGGGTTGATGGTC+TGG | 0.434125 | 1.3:-74491249 | MS.gene75202:CDS |
| GAAGTATGGCTTTGGCAGGT+TGG | 0.434435 | 1.3:-74490732 | MS.gene75202:CDS |
| AAGGACAGGACCTTCTATAT+AGG | 0.435333 | 1.3:+74494046 | None:intergenic |
| AACTGGCATGGCACACACTT+TGG | 0.435584 | 1.3:-74491163 | MS.gene75202:CDS |
| TTTGATTGGACATGAGGATT+GGG | 0.435859 | 1.3:-74493982 | MS.gene75202:CDS |
| CATGAGACCTCTGATACAAA+TGG | 0.436275 | 1.3:-74491263 | MS.gene75202:CDS |
| CTGTATATGCCATTCCCGTT+TGG | 0.438205 | 1.3:+74494092 | None:intergenic |
| GAAGGTCCTGTCCTTGTGGC+TGG | 0.439711 | 1.3:-74494038 | MS.gene75202:CDS |
| AGGGACACAAGCGGATTATC+TGG | 0.442277 | 1.3:-74489963 | MS.gene75202:CDS |
| ATGAGACCTCTGATACAAAT+GGG | 0.444909 | 1.3:-74491262 | MS.gene75202:CDS |
| CACGGCCATGAATTTGCAAC+AGG | 0.445611 | 1.3:-74489922 | MS.gene75202:CDS |
| AGATGGTACTGTTTGTATAT+GGG | 0.448027 | 1.3:-74494675 | MS.gene75202:CDS |
| CAAACGGGAATGGCATATAC+AGG | 0.452267 | 1.3:-74494091 | MS.gene75202:CDS |
| CGTCCTTGCAATGGGAGGAT+TGG | 0.455070 | 1.3:-74494433 | MS.gene75202:CDS |
| AACACAGTTGGAACTGCGTC+GGG | 0.458249 | 1.3:+74491209 | None:intergenic |
| ATTGGGTATATTCGGTTGAA+TGG | 0.458591 | 1.3:-74493965 | MS.gene75202:CDS |
| GGTGGTCATTGGAGCCCAAA+TGG | 0.468423 | 1.3:-74493771 | MS.gene75202:CDS |
| GGTGCAAATATGTCAGCTCT+TGG | 0.475040 | 1.3:-74492518 | MS.gene75202:CDS |
| GTGTTTACAATCACAACAAC+AGG | 0.476242 | 1.3:-74490597 | MS.gene75202:intron |
| CTCCCCAATCGAAGAAATGA+TGG | 0.478352 | 1.3:-74489784 | MS.gene75202:CDS |
| TACGTAGCTCCGTGCCAAAC+GGG | 0.479132 | 1.3:-74494106 | MS.gene75202:CDS |
| AGGCAATTCCGCCATCGATA+AGG | 0.479680 | 1.3:+74494473 | None:intergenic |
| TGACAACTGGCTTACACAAA+AGG | 0.480622 | 1.3:-74493688 | MS.gene75202:CDS |
| CATGCCAGTTGATCTTCAAT+TGG | 0.481967 | 1.3:+74491176 | None:intergenic |
| GATATAGCATGGGCTAGATC+TGG | 0.482923 | 1.3:-74493636 | MS.gene75202:CDS |
| TGGACAAGACTATGATGATC+TGG | 0.487149 | 1.3:-74493872 | MS.gene75202:CDS |
| CTTCCGTGGATGCAACCAAA+GGG | 0.488239 | 1.3:+74493937 | None:intergenic |
| AGAGAAACCTCGACTTTCCA+TGG | 0.491446 | 1.3:+74492770 | None:intergenic |
| AATTATGGTTTCTCAAACTG+AGG | 0.493661 | 1.3:-74494720 | None:intergenic |
| GGATGGAAGCATTGTAGTAC+CGG | 0.495177 | 1.3:-74489695 | MS.gene75202:CDS |
| ACAAGATTCACCTTTACTGC+GGG | 0.496063 | 1.3:-74494407 | MS.gene75202:CDS |
| CTGTGTCACTGTTAAGCTAT+GGG | 0.496668 | 1.3:+74490680 | None:intergenic |
| CAACTAGAATTTATGCTCCA+TGG | 0.497145 | 1.3:-74492787 | MS.gene75202:CDS |
| TGATGAAGATTTCTTCTCTA+CGG | 0.497228 | 1.3:+74489870 | None:intergenic |
| TTACGTAGCTCCGTGCCAAA+CGG | 0.497618 | 1.3:-74494107 | MS.gene75202:CDS |
| CTAGCTGTTGGAATGGAAAA+CGG | 0.499403 | 1.3:-74489757 | MS.gene75202:CDS |
| GTAGTGTGACAGCATTGTCT+TGG | 0.501252 | 1.3:-74489813 | MS.gene75202:CDS |
| AGCTTATCATCCTATATAGA+AGG | 0.501427 | 1.3:-74494056 | MS.gene75202:CDS |
| TGATTGTAAACACAGAGAAC+TGG | 0.501451 | 1.3:+74490607 | None:intergenic |
| CTGTCATACAATTTATATCA+TGG | 0.501729 | 1.3:+74492699 | None:intergenic |
| TCTGTGTCACTGTTAAGCTA+TGG | 0.504079 | 1.3:+74490679 | None:intergenic |
| CTCTTCAAGATGGAGAGTCT+TGG | 0.504927 | 1.3:-74492751 | MS.gene75202:CDS |
| GGTCAAATCGTCCTTGCAAT+GGG | 0.506094 | 1.3:-74494441 | MS.gene75202:CDS |
| GCCAGTTGATCTTCAATTGG+AGG | 0.508620 | 1.3:+74491179 | None:intergenic |
| AAGACTATAACTAATTTCAC+TGG | 0.509024 | 1.3:+74489999 | None:intergenic |
| GTCGAGGTTTCTCTTCAAGA+TGG | 0.509924 | 1.3:-74492761 | MS.gene75202:CDS |
| AAAATGTTGGTGATGACAAC+TGG | 0.510399 | 1.3:-74493701 | MS.gene75202:CDS |
| CTGTGGCAGAAGTATGGCTT+TGG | 0.512071 | 1.3:-74490740 | MS.gene75202:CDS |
| TGACTGTAAATTATCATGCC+TGG | 0.515474 | 1.3:-74494529 | MS.gene75202:CDS |
| AATGATGGAATTCTAGCTGT+TGG | 0.518192 | 1.3:-74489769 | MS.gene75202:CDS |
| GGCAGAAGTATGGCTTTGGC+AGG | 0.518853 | 1.3:-74490736 | MS.gene75202:CDS |
| TAGTGTGACAGCATTGTCTT+GGG | 0.519272 | 1.3:-74489812 | MS.gene75202:CDS |
| TTTGCATCTACTTCTTCAGA+TGG | 0.519491 | 1.3:-74494692 | MS.gene75202:CDS |
| GAACTAAGCCACTGTGCTCT+GGG | 0.520247 | 1.3:-74493801 | MS.gene75202:CDS |
| AGCTCCGTGCCAAACGGGAA+TGG | 0.521165 | 1.3:-74494101 | MS.gene75202:CDS |
| CCTTTGGTTGCATCCACGGA+AGG | 0.522914 | 1.3:-74493936 | MS.gene75202:CDS |
| ATGACAGTTGTTCATAGTAA+GGG | 0.523352 | 1.3:-74492683 | MS.gene75202:CDS |
| ATAACAGGCTTCCCCTTCCG+TGG | 0.525346 | 1.3:+74493923 | None:intergenic |
| TTCCATCATTTCTTCGATTG+GGG | 0.526646 | 1.3:+74489782 | None:intergenic |
| AGTCTACAACTTGCTTCTTG+TGG | 0.530154 | 1.3:-74489574 | MS.gene75202:CDS |
| TGGTCAAATCGTCCTTGCAA+TGG | 0.532210 | 1.3:-74494442 | MS.gene75202:CDS |
| AAGGGCATACAGATTGGATC+CGG | 0.534028 | 1.3:-74494232 | MS.gene75202:CDS |
| TGCCTCTACAGTAAACCGTC+TGG | 0.535874 | 1.3:-74489626 | MS.gene75202:CDS |
| TTTGGTTGCATCCACGGAAG+GGG | 0.535971 | 1.3:-74493934 | MS.gene75202:CDS |
| TCACATAAACTCTATGGCCA+TGG | 0.537110 | 1.3:-74491134 | MS.gene75202:CDS |
| GTGACAGCATTGTCTTGGGT+TGG | 0.548956 | 1.3:-74489808 | MS.gene75202:CDS |
| GGAGGTTCAGTAAACACAGT+TGG | 0.549347 | 1.3:+74491197 | None:intergenic |
| GATGCAGATAAAATGCTTTG+TGG | 0.550954 | 1.3:+74493897 | None:intergenic |
| CTACAGTAAACCGTCTGGCA+TGG | 0.553191 | 1.3:-74489621 | MS.gene75202:CDS |
| CTTTGGTTGCATCCACGGAA+GGG | 0.553868 | 1.3:-74493935 | MS.gene75202:CDS |
| AGAAGAGCAGCGGCGAAACC+CGG | 0.555080 | 1.3:+74489676 | None:intergenic |
| CATCAGCTCCGCCAACAAAA+CGG | 0.556187 | 1.3:+74492654 | None:intergenic |
| CCTTCCGTGGATGCAACCAA+AGG | 0.557493 | 1.3:+74493936 | None:intergenic |
| CATCGGTGACTGATATAGCA+TGG | 0.557572 | 1.3:-74493647 | MS.gene75202:CDS |
| ATGCATACGAATTTGGAAGA+TGG | 0.561651 | 1.3:-74494132 | MS.gene75202:CDS |
| AAGAAAATAGCTCATTTCCA+TGG | 0.561954 | 1.3:+74491117 | None:intergenic |
| TATCCAATCCTCCCATTGCA+AGG | 0.562834 | 1.3:+74494430 | None:intergenic |
| GTTGGTTCATGGAAAGCAGT+TGG | 0.566583 | 1.3:-74490714 | MS.gene75202:CDS |
| TATGCCATTCCCGTTTGGCA+CGG | 0.567694 | 1.3:+74494097 | None:intergenic |
| TGCCAGACGGTTTACTGTAG+AGG | 0.573011 | 1.3:+74489624 | None:intergenic |
| TATAGAAGGTCCTGTCCTTG+TGG | 0.573054 | 1.3:-74494042 | MS.gene75202:CDS |
| CTTACACAAAAGGTTCCCTC+TGG | 0.573072 | 1.3:-74493678 | MS.gene75202:CDS |
| TGGAATTCTAGCTGTTGGAA+TGG | 0.578033 | 1.3:-74489764 | MS.gene75202:CDS |
| TACCATAGATTTAGAACCAA+CGG | 0.580301 | 1.3:+74494497 | None:intergenic |
| ATCAACCCCATTTGTATCAG+AGG | 0.580402 | 1.3:+74491256 | None:intergenic |
| CGACAAGACAGTGAAAATCT+GGG | 0.588108 | 1.3:-74489893 | MS.gene75202:CDS |
| AAACACAGTTGGAACTGCGT+CGG | 0.588864 | 1.3:+74491208 | None:intergenic |
| GATCATCATAGTCTTGTCCA+TGG | 0.589029 | 1.3:+74493875 | None:intergenic |
| TAGTCTTCTTGCGAGGCAGG+AGG | 0.589362 | 1.3:-74489983 | MS.gene75202:CDS |
| TGCGTCGGGAACAGTTTCAA+AGG | 0.592159 | 1.3:+74491223 | None:intergenic |
| ACGATTTGACCACTACATCC+AGG | 0.600975 | 1.3:+74494453 | None:intergenic |
| TCCTATAACAGACAAGAGGA+TGG | 0.602584 | 1.3:-74489712 | MS.gene75202:CDS |
| TGACAGTTGTTCATAGTAAG+GGG | 0.603153 | 1.3:-74492682 | MS.gene75202:CDS |
| TATATCAGCTAGCCATGACC+AGG | 0.603806 | 1.3:-74493604 | MS.gene75202:intron |
| TCTGGCATGGAGGAAAATTG+AGG | 0.604356 | 1.3:-74489608 | MS.gene75202:CDS |
| AGTCTTCTTGCGAGGCAGGA+GGG | 0.605997 | 1.3:-74489982 | MS.gene75202:CDS |
| ATCGGTGACTGATATAGCAT+GGG | 0.610638 | 1.3:-74493646 | MS.gene75202:CDS |
| ACCTGTAAGCATCAATGGAG+AGG | 0.613920 | 1.3:-74494192 | MS.gene75202:CDS |
| CGAGGCAGGAGGGACACAAG+CGG | 0.615848 | 1.3:-74489972 | MS.gene75202:CDS |
| TAGCTTAACAGTGACACAGA+TGG | 0.618590 | 1.3:-74490676 | MS.gene75202:CDS |
| TGGATGAATGTGGTTACTGT+TGG | 0.619332 | 1.3:-74493825 | MS.gene75202:CDS |
| GCGGAATTGCCTGGATGTAG+TGG | 0.621195 | 1.3:-74494462 | MS.gene75202:CDS |
| AAGAAGAAGAGCCAGCCACA+AGG | 0.621956 | 1.3:+74494027 | None:intergenic |
| AAGATTCACCTTTACTGCGG+GGG | 0.621967 | 1.3:-74494405 | MS.gene75202:CDS |
| TTATGCTCCATGGAAAGTCG+AGG | 0.623529 | 1.3:-74492777 | MS.gene75202:CDS |
| TCCGTGGATGCAACCAAAGG+GGG | 0.625596 | 1.3:+74493939 | None:intergenic |
| GTACTTCCACTGACGAGTAG+TGG | 0.627306 | 1.3:-74494647 | MS.gene75202:intron |
| GCAGGCCCAATCTACTGCTG+TGG | 0.627705 | 1.3:-74490757 | MS.gene75202:intron |
| CAATTGAAGATCAACTGGCA+TGG | 0.629052 | 1.3:-74491175 | MS.gene75202:CDS |
| TTAAGCTATGGGATTGCAAG+CGG | 0.629501 | 1.3:+74490691 | None:intergenic |
| CAAATCGTCCTTGCAATGGG+AGG | 0.631304 | 1.3:-74494438 | MS.gene75202:CDS |
| AACAAGATTCACCTTTACTG+CGG | 0.631780 | 1.3:-74494408 | MS.gene75202:CDS |
| ATCTATGGTAGCCTTATCGA+TGG | 0.631961 | 1.3:-74494484 | MS.gene75202:CDS |
| TGTGCTCTGGGATTCTATGG+TGG | 0.635038 | 1.3:-74493789 | MS.gene75202:CDS |
| ATAACAAGACTTCTGCAAAG+TGG | 0.637064 | 1.3:+74492574 | None:intergenic |
| GATGGAAGCATTGTAGTACC+GGG | 0.637075 | 1.3:-74489694 | MS.gene75202:CDS |
| GGCTTACCACTACTCGTCAG+TGG | 0.637295 | 1.3:+74494641 | None:intergenic |
| AAAACGGCCAAATAGAGTTG+TGG | 0.638326 | 1.3:-74489741 | MS.gene75202:CDS |
| AGTCTTGGTATGAGATTGCG+CGG | 0.641165 | 1.3:-74492736 | MS.gene75202:CDS |
| ACCGATGCAAAATGACCAGA+GGG | 0.642490 | 1.3:+74493663 | None:intergenic |
| GTTGCAAATTCATGGCCGTG+TGG | 0.643567 | 1.3:+74489925 | None:intergenic |
| CTGAAAAGACTTCTGGTGTG+TGG | 0.643767 | 1.3:-74493845 | MS.gene75202:CDS |
| TCATGTTCTTGGAACCCACA+CGG | 0.651148 | 1.3:-74489940 | MS.gene75202:CDS |
| ATATCATGGCCATGAACCTG+AGG | 0.654048 | 1.3:+74492713 | None:intergenic |
| TTGCAAATTCATGGCCGTGT+GGG | 0.657111 | 1.3:+74489926 | None:intergenic |
| CAGTAAACCGTCTGGCATGG+AGG | 0.660516 | 1.3:-74489618 | MS.gene75202:CDS |
| TTCCGTGGATGCAACCAAAG+GGG | 0.666647 | 1.3:+74493938 | None:intergenic |
| TCTGTCCTATAACAGACAAG+AGG | 0.667351 | 1.3:-74489716 | MS.gene75202:CDS |
| CACCGATGCAAAATGACCAG+AGG | 0.669482 | 1.3:+74493662 | None:intergenic |
| TACGCGAACAAGAAGAGCAG+CGG | 0.669620 | 1.3:+74489666 | None:intergenic |
| TTAGTTATAGTCTTCTTGCG+AGG | 0.676218 | 1.3:-74489990 | MS.gene75202:CDS |
| GTAATGAGAAGTCCAAACTC+CGG | 0.676979 | 1.3:+74494213 | None:intergenic |
| CAAGATTCACCTTTACTGCG+GGG | 0.678899 | 1.3:-74494406 | MS.gene75202:CDS |
| AAACGGGAATGGCATATACA+GGG | 0.680280 | 1.3:-74494090 | MS.gene75202:CDS |
| TTCTGGTGTGTGGATGAATG+TGG | 0.682155 | 1.3:-74493835 | MS.gene75202:CDS |
| TATGGTAGCCTTATCGATGG+CGG | 0.688793 | 1.3:-74494481 | MS.gene75202:CDS |
| GTCACACTACTCGTAAATGG+AGG | 0.699933 | 1.3:+74489826 | None:intergenic |
| TGAGACCTCTGATACAAATG+GGG | 0.710699 | 1.3:-74491261 | MS.gene75202:CDS |
| CGGGAATGGCATATACAGGG+AGG | 0.738065 | 1.3:-74494087 | MS.gene75202:CDS |
| CATAGAATCCCAGAGCACAG+TGG | 0.755507 | 1.3:+74493793 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGATCATTTTTTTTTTTT+TGG | - | chr1.3:74493549-74493568 | MS.gene75202:intron | 10.0% |
| !! | AAATACTTGAATAAAACTAT+TGG | - | chr1.3:74491766-74491785 | MS.gene75202:intron | 15.0% |
| !! | AAATAGGATACAATAATATA+GGG | - | chr1.3:74491915-74491934 | MS.gene75202:intron | 15.0% |
| !! | AATTAATGTATATCAAATGT+TGG | + | chr1.3:74493166-74493185 | None:intergenic | 15.0% |
| !! | ATGTTAGTAATCTATAATTA+TGG | + | chr1.3:74489705-74489724 | None:intergenic | 15.0% |
| !! | TAAATAGGATACAATAATAT+AGG | - | chr1.3:74491914-74491933 | MS.gene75202:intron | 15.0% |
| !! | TACAGATATATCAAAAAATA+AGG | + | chr1.3:74494572-74494591 | None:intergenic | 15.0% |
| !! | TATCTGTTAATTTATCTATT+AGG | - | chr1.3:74490525-74490544 | MS.gene75202:intron | 15.0% |
| !! | TTTAATTAGTTGTATAAACT+TGG | - | chr1.3:74491154-74491173 | MS.gene75202:CDS | 15.0% |
| !!! | TAATAATTCATATTTTCAAG+AGG | + | chr1.3:74494659-74494678 | None:intergenic | 15.0% |
| !! | AAACAATTATATATCTGTTC+TGG | - | chr1.3:74492714-74492733 | MS.gene75202:CDS | 20.0% |
| !! | AAATACTAATCACTTAATTG+TGG | - | chr1.3:74494027-74494046 | MS.gene75202:CDS | 20.0% |
| !! | AATAGGATACAATAATATAG+GGG | - | chr1.3:74491916-74491935 | MS.gene75202:intron | 20.0% |
| !! | ATAAATAATTTATGCATTGC+AGG | - | chr1.3:74493284-74493303 | MS.gene75202:intron | 20.0% |
| !! | TAACATCAGAAAATAAAACA+CGG | + | chr1.3:74492680-74492699 | None:intergenic | 20.0% |
| !! | TAGATGATCTATTAACTTAT+TGG | - | chr1.3:74491001-74491020 | MS.gene75202:intron | 20.0% |
| !! | TTATACAACTAATTAAACCA+TGG | + | chr1.3:74491151-74491170 | None:intergenic | 20.0% |
| !!! | AACGTTTTCAAAAATGATAA+TGG | + | chr1.3:74491457-74491476 | None:intergenic | 20.0% |
| !!! | AGACATTTTCGAATTATAAA+AGG | + | chr1.3:74490572-74490591 | None:intergenic | 20.0% |
| !!! | ATGATGTATTTTTAAATACC+TGG | + | chr1.3:74490476-74490495 | None:intergenic | 20.0% |
| !!! | GAATATTTTTTTACTCCTAT+AGG | - | chr1.3:74494597-74494616 | MS.gene75202:intron | 20.0% |
| !!! | TCTTTTCAATTCAATTTCTT+TGG | - | chr1.3:74492493-74492512 | MS.gene75202:CDS | 20.0% |
| !!! | TGAAGTATTTTTTGCTAAAT+AGG | - | chr1.3:74494693-74494712 | MS.gene75202:CDS | 20.0% |
| !!! | TTCCTTATAGTTTTCTTTTT+GGG | - | chr1.3:74489735-74489754 | MS.gene75202:CDS | 20.0% |
| !!! | TTTAAAATGCCACATTTTAT+TGG | - | chr1.3:74491057-74491076 | MS.gene75202:intron | 20.0% |
| !!! | TTTTTTATGTGACAAATAAC+AGG | - | chr1.3:74491624-74491643 | MS.gene75202:intron | 20.0% |
| ! | AACATCAGAAAATAAAACAC+GGG | + | chr1.3:74492679-74492698 | None:intergenic | 25.0% |
| ! | AAGACTATAACTAATTTCAC+TGG | + | chr1.3:74494063-74494082 | None:intergenic | 25.0% |
| ! | AATAAAAAGTTACGAGAGTT+GGG | - | chr1.3:74492531-74492550 | MS.gene75202:CDS | 25.0% |
| ! | ACTTGAATAAAACTATTGGT+TGG | - | chr1.3:74491770-74491789 | MS.gene75202:intron | 25.0% |
| ! | ATAACAGTAAACATTGTCAT+TGG | + | chr1.3:74489452-74489471 | None:intergenic | 25.0% |
| ! | ATCCTCAAATTTACAAACTT+TGG | + | chr1.3:74492753-74492772 | None:intergenic | 25.0% |
| ! | ATCTTTCTGTCAAATTATAC+AGG | + | chr1.3:74493038-74493057 | None:intergenic | 25.0% |
| ! | ATGCGTAGATAAACAAAAAA+AGG | + | chr1.3:74490951-74490970 | None:intergenic | 25.0% |
| ! | CTAAAATTGAATCTCCATTT+GGG | + | chr1.3:74490305-74490324 | None:intergenic | 25.0% |
| ! | CTGTCATACAATTTATATCA+TGG | + | chr1.3:74491363-74491382 | None:intergenic | 25.0% |
| ! | GAAATAAGTCAAAAAAGGAA+TGG | + | chr1.3:74492339-74492358 | None:intergenic | 25.0% |
| ! | TAAAGGTGAATTAGTAGTTA+AGG | - | chr1.3:74491858-74491877 | MS.gene75202:intron | 25.0% |
| ! | TAATAAAAAGTTACGAGAGT+TGG | - | chr1.3:74492530-74492549 | MS.gene75202:CDS | 25.0% |
| ! | TACATTAATTTCAACCAACT+TGG | - | chr1.3:74493176-74493195 | MS.gene75202:intron | 25.0% |
| ! | TAGGAATATTGTGTGTAAAT+AGG | - | chr1.3:74491899-74491918 | MS.gene75202:intron | 25.0% |
| ! | TAGTAAATAGTTACAGCTTA+TGG | - | chr1.3:74491807-74491826 | MS.gene75202:intron | 25.0% |
| ! | TCAACAAATTAACTAACCTT+GGG | + | chr1.3:74491590-74491609 | None:intergenic | 25.0% |
| ! | TCATAATAGTAATGCAGAAA+AGG | + | chr1.3:74493534-74493553 | None:intergenic | 25.0% |
| ! | TGCGTAGATAAACAAAAAAA+GGG | + | chr1.3:74490950-74490969 | None:intergenic | 25.0% |
| ! | TTAGCAAAAAATACTTCATG+TGG | + | chr1.3:74494691-74494710 | None:intergenic | 25.0% |
| ! | TTCAACAAATTAACTAACCT+TGG | + | chr1.3:74491591-74491610 | None:intergenic | 25.0% |
| ! | TTGTCATTACCAATAAAATG+TGG | + | chr1.3:74491069-74491088 | None:intergenic | 25.0% |
| !! | AATCTATAGTAAAGCTTTTG+TGG | + | chr1.3:74490504-74490523 | None:intergenic | 25.0% |
| !! | ACTTTTTATTAACAGCTGTT+AGG | + | chr1.3:74492521-74492540 | None:intergenic | 25.0% |
| !! | AGAGGTAAACAATATTTTTC+TGG | - | chr1.3:74489885-74489904 | MS.gene75202:CDS | 25.0% |
| !! | ATTAAGTTGTTCATTCAAAC+AGG | - | chr1.3:74493929-74493948 | MS.gene75202:CDS | 25.0% |
| !! | GCTGATATTTCTACATTATT+TGG | - | chr1.3:74493251-74493270 | MS.gene75202:intron | 25.0% |
| !! | GTGGCATTTTAAACATTTTT+AGG | + | chr1.3:74491050-74491069 | None:intergenic | 25.0% |
| !! | GTTCCTTATAGTTTTCTTTT+TGG | - | chr1.3:74489734-74489753 | MS.gene75202:CDS | 25.0% |
| !! | TATTTCACATAGCGTATTTT+TGG | - | chr1.3:74492387-74492406 | MS.gene75202:intron | 25.0% |
| !! | TCTTACAATTTTCTTGACTA+TGG | - | chr1.3:74493083-74493102 | MS.gene75202:intron | 25.0% |
| !! | TTAAGTTGTTCATTCAAACA+GGG | - | chr1.3:74493930-74493949 | MS.gene75202:CDS | 25.0% |
| !!! | AGTTACTTATGGTGTTTTAA+AGG | - | chr1.3:74494719-74494738 | MS.gene75202:CDS | 25.0% |
| !!! | GAAAAAAGAGCATTAGAAAT+TGG | + | chr1.3:74493144-74493163 | None:intergenic | 25.0% |
| !!! | TATTTTTAAATACCTGGTCA+TGG | + | chr1.3:74490470-74490489 | None:intergenic | 25.0% |
| !!! | TTTTTTACTCCTATAGGTAT+AGG | - | chr1.3:74494603-74494622 | MS.gene75202:intron | 25.0% |
| !!! | TTTTTTTTGGTGACTTTCTT+TGG | - | chr1.3:74493562-74493581 | MS.gene75202:intron | 25.0% |
| AACAAAACCATAGTCATAGA+AGG | - | chr1.3:74492638-74492657 | MS.gene75202:CDS | 30.0% | |
| AACATTGTCATTGGAAAAGT+AGG | + | chr1.3:74489443-74489462 | None:intergenic | 30.0% | |
| AAGAAAATAGCTCATTTCCA+TGG | + | chr1.3:74492945-74492964 | None:intergenic | 30.0% | |
| AAGACAAATGCATACGAATT+TGG | - | chr1.3:74489920-74489939 | MS.gene75202:CDS | 30.0% | |
| AATCATTTATACTCTCAGTC+AGG | + | chr1.3:74493669-74493688 | None:intergenic | 30.0% | |
| AATTCCATCATTTCTTCGAT+TGG | + | chr1.3:74494282-74494301 | None:intergenic | 30.0% | |
| ACAAAACCATAGTCATAGAA+GGG | - | chr1.3:74492639-74492658 | MS.gene75202:CDS | 30.0% | |
| ACATTGTCATTGGAAAAGTA+GGG | + | chr1.3:74489442-74489461 | None:intergenic | 30.0% | |
| AGATGGTACTGTTTGTATAT+GGG | - | chr1.3:74489384-74489403 | MS.gene75202:intron | 30.0% | |
| AGATTCATCATTATGAATCC+GGG | + | chr1.3:74490834-74490853 | None:intergenic | 30.0% | |
| AGCTTATCATCCTATATAGA+AGG | - | chr1.3:74490003-74490022 | MS.gene75202:CDS | 30.0% | |
| AGTGATTCATTAGAGTGAAT+CGG | + | chr1.3:74490874-74490893 | None:intergenic | 30.0% | |
| ATATATCTGTTCTGGTGTAT+TGG | - | chr1.3:74492722-74492741 | MS.gene75202:CDS | 30.0% | |
| ATGACAGTTGTTCATAGTAA+GGG | - | chr1.3:74491376-74491395 | MS.gene75202:intron | 30.0% | |
| ATGTTATCAATAGCAGATTG+CGG | + | chr1.3:74492427-74492446 | None:intergenic | 30.0% | |
| ATTCCATCATTTCTTCGATT+GGG | + | chr1.3:74494281-74494300 | None:intergenic | 30.0% | |
| ATTGGAAGCTTTACGTATTA+TGG | + | chr1.3:74492293-74492312 | None:intergenic | 30.0% | |
| CACACTGATATGTAAATACT+TGG | - | chr1.3:74491942-74491961 | MS.gene75202:intron | 30.0% | |
| CTCCAAAGTTTGTAAATTTG+AGG | - | chr1.3:74492748-74492767 | MS.gene75202:CDS | 30.0% | |
| CTCCCAAAAAGAAAACTATA+AGG | + | chr1.3:74489740-74489759 | None:intergenic | 30.0% | |
| GACAAATTCAAGATAACAAG+TGG | + | chr1.3:74491213-74491232 | None:intergenic | 30.0% | |
| GAGATCACATTGTTTAATGT+TGG | - | chr1.3:74491655-74491674 | MS.gene75202:intron | 30.0% | |
| GAGATTCATCATTATGAATC+CGG | + | chr1.3:74490835-74490854 | None:intergenic | 30.0% | |
| GATACAAAACTGAATCCAAT+TGG | - | chr1.3:74490656-74490675 | MS.gene75202:CDS | 30.0% | |
| GATATTTAGTCCATCATTCT+AGG | - | chr1.3:74489507-74489526 | MS.gene75202:intron | 30.0% | |
| GCGTAGATAAACAAAAAAAG+GGG | + | chr1.3:74490949-74490968 | None:intergenic | 30.0% | |
| GCTAAAATTGAATCTCCATT+TGG | + | chr1.3:74490306-74490325 | None:intergenic | 30.0% | |
| GGGTTGAAATAAGTCAAAAA+AGG | + | chr1.3:74492344-74492363 | None:intergenic | 30.0% | |
| TAAATAGGTCGAGTTACTTA+TGG | - | chr1.3:74494708-74494727 | MS.gene75202:CDS | 30.0% | |
| TACATTCATGTGAGCTAAAA+GGG | - | chr1.3:74489809-74489828 | MS.gene75202:CDS | 30.0% | |
| TAGTAGTTAAGGTTAGTAGT+TGG | - | chr1.3:74491869-74491888 | MS.gene75202:intron | 30.0% | |
| TATGACAGTTGTTCATAGTA+AGG | - | chr1.3:74491375-74491394 | MS.gene75202:intron | 30.0% | |
| TATGGAACTGAATTGAACAT+TGG | - | chr1.3:74493618-74493637 | MS.gene75202:CDS | 30.0% | |
| TCCAATCAAAAGAGATTCTA+AGG | + | chr1.3:74490067-74490086 | None:intergenic | 30.0% | |
| TCTCGAGTATGTATCTATTT+CGG | - | chr1.3:74490685-74490704 | MS.gene75202:CDS | 30.0% | |
| TCTTTATGCTGTGATCATAA+GGG | - | chr1.3:74492961-74492980 | MS.gene75202:intron | 30.0% | |
| TGATGAAGATTTCTTCTCTA+CGG | + | chr1.3:74494192-74494211 | None:intergenic | 30.0% | |
| TTCTTTATGCTGTGATCATA+AGG | - | chr1.3:74492960-74492979 | MS.gene75202:intron | 30.0% | |
| ! | ACATGATCTATTTTCACCAT+AGG | - | chr1.3:74492226-74492245 | MS.gene75202:intron | 30.0% |
| ! | ATAGGCAGAAGAAAAAGTAT+AGG | + | chr1.3:74489777-74489796 | None:intergenic | 30.0% |
| ! | ATCACTTAATTGTGGTTTGT+AGG | - | chr1.3:74494035-74494054 | MS.gene75202:CDS | 30.0% |
| ! | TACCATAGATTTAGAACCAA+CGG | + | chr1.3:74489565-74489584 | None:intergenic | 30.0% |
| ! | TCCTTAGAATCTCTTTTGAT+TGG | - | chr1.3:74490063-74490082 | MS.gene75202:intron | 30.0% |
| ! | TCTCGAGTATGTATCTATTT+TGG | - | chr1.3:74490685-74490704 | MS.gene75202:CDS | 30.0% |
| ! | TTCCATCTTTGGAAAAATGT+TGG | - | chr1.3:74490345-74490364 | MS.gene75202:intron | 30.0% |
| ! | TTGACAAACATCCAGATTTT+GGG | - | chr1.3:74491520-74491539 | MS.gene75202:intron | 30.0% |
| !! | CTCTTTATTTCTGCTATTGA+CGG | + | chr1.3:74492168-74492187 | None:intergenic | 30.0% |
| !! | GAGCATCGGTAATAATATAT+TGG | + | chr1.3:74492311-74492330 | None:intergenic | 30.0% |
| !! | TACAGTGTTGACAAAAAAAG+TGG | + | chr1.3:74490919-74490938 | None:intergenic | 30.0% |
| !! | TCAATTTTAGCACATGGATA+TGG | - | chr1.3:74490315-74490334 | MS.gene75202:intron | 30.0% |
| AAACGCGTAAAATAAATGCC+TGG | + | chr1.3:74493958-74493977 | None:intergenic | 35.0% | |
| AACAAGATTCACCTTTACTG+CGG | - | chr1.3:74489651-74489670 | MS.gene75202:CDS | 35.0% | |
| AACGCGTAAAATAAATGCCT+GGG | + | chr1.3:74493957-74493976 | None:intergenic | 35.0% | |
| AACTAACCTTGGGCATAAAT+AGG | + | chr1.3:74491580-74491599 | None:intergenic | 35.0% | |
| AACTTTGACTGCAAAGGATT+TGG | - | chr1.3:74491708-74491727 | MS.gene75202:intron | 35.0% | |
| AATAACCTGAAAACCGCTTA+TGG | + | chr1.3:74493780-74493799 | None:intergenic | 35.0% | |
| AATGTACAAACTGGGTTCAT+AGG | + | chr1.3:74489795-74489814 | None:intergenic | 35.0% | |
| ACATATTTGCACCCAAAATC+TGG | + | chr1.3:74491534-74491553 | None:intergenic | 35.0% | |
| ACATGAGGATTGGGTATATT+CGG | - | chr1.3:74490086-74490105 | MS.gene75202:intron | 35.0% | |
| ACTTATGACATGTCCATAAG+CGG | - | chr1.3:74493764-74493783 | MS.gene75202:CDS | 35.0% | |
| AGATAAACAAAAAAAGGGGC+TGG | + | chr1.3:74490945-74490964 | None:intergenic | 35.0% | |
| AGATTCATCATGATGAATCC+GGG | + | chr1.3:74490732-74490751 | None:intergenic | 35.0% | |
| AGGAAACTAAAGTGAAGAGT+TGG | - | chr1.3:74492246-74492265 | MS.gene75202:intron | 35.0% | |
| AGTTAAGGTTAGTAGTTGGT+TGG | - | chr1.3:74491873-74491892 | MS.gene75202:intron | 35.0% | |
| ATAACAAGACTTCTGCAAAG+TGG | + | chr1.3:74491488-74491507 | None:intergenic | 35.0% | |
| ATGAGACCTCTGATACAAAT+GGG | - | chr1.3:74492797-74492816 | MS.gene75202:intron | 35.0% | |
| ATGCATACGAATTTGGAAGA+TGG | - | chr1.3:74489927-74489946 | MS.gene75202:CDS | 35.0% | |
| ATTGGGTATATTCGGTTGAA+TGG | - | chr1.3:74490094-74490113 | MS.gene75202:intron | 35.0% | |
| CAAAAACCTATTTATGCCCA+AGG | - | chr1.3:74491571-74491590 | MS.gene75202:intron | 35.0% | |
| CAACTAGAATTTATGCTCCA+TGG | - | chr1.3:74491272-74491291 | MS.gene75202:intron | 35.0% | |
| CAGATGGTACTGTTTGTATA+TGG | - | chr1.3:74489383-74489402 | MS.gene75202:intron | 35.0% | |
| CAGTGAGTTAGACAACATAT+AGG | + | chr1.3:74490596-74490615 | None:intergenic | 35.0% | |
| CATGTTGCTATGCAGAATAA+AGG | - | chr1.3:74491841-74491860 | MS.gene75202:intron | 35.0% | |
| CCATAGAGTTTATGTGATTC+AGG | + | chr1.3:74492922-74492941 | None:intergenic | 35.0% | |
| CCTGAATCACATAAACTCTA+TGG | - | chr1.3:74492919-74492938 | MS.gene75202:intron | 35.0% | |
| CTCACATGAATGTACAAACT+GGG | + | chr1.3:74489803-74489822 | None:intergenic | 35.0% | |
| GAATCTCGATTTAACAACCA+TGG | - | chr1.3:74491131-74491150 | MS.gene75202:CDS | 35.0% | |
| GAGATTCATCATGATGAATC+CGG | + | chr1.3:74490733-74490752 | None:intergenic | 35.0% | |
| GATGCAGATAAAATGCTTTG+TGG | + | chr1.3:74490165-74490184 | None:intergenic | 35.0% | |
| GATTCATCATTATGAATCCG+GGG | + | chr1.3:74490833-74490852 | None:intergenic | 35.0% | |
| GCATCTCATATTGAGGATAT+GGG | - | chr1.3:74492581-74492600 | MS.gene75202:CDS | 35.0% | |
| GTACATTCATGTGAGCTAAA+AGG | - | chr1.3:74489808-74489827 | MS.gene75202:CDS | 35.0% | |
| GTGATTCATTAGAGTGAATC+GGG | + | chr1.3:74490873-74490892 | None:intergenic | 35.0% | |
| GTGTTTACAATCACAACAAC+AGG | - | chr1.3:74493462-74493481 | MS.gene75202:intron | 35.0% | |
| GTTAGCATACCTATACCTAT+AGG | + | chr1.3:74494615-74494634 | None:intergenic | 35.0% | |
| TACTCGAGATTAGTACCAAT+TGG | + | chr1.3:74490776-74490795 | None:intergenic | 35.0% | |
| TACTCGAGATTTGTACCAAT+TGG | + | chr1.3:74490674-74490693 | None:intergenic | 35.0% | |
| TAGAGCAGTAAAGTGTACAA+CGG | + | chr1.3:74493229-74493248 | None:intergenic | 35.0% | |
| TCATTACCTGTAAGCATCAA+TGG | - | chr1.3:74489862-74489881 | MS.gene75202:CDS | 35.0% | |
| TCTTTCTCATTGTTATCTGC+TGG | - | chr1.3:74491681-74491700 | MS.gene75202:intron | 35.0% | |
| TGACAGTTGTTCATAGTAAG+GGG | - | chr1.3:74491377-74491396 | MS.gene75202:intron | 35.0% | |
| TGACTGTAAATTATCATGCC+TGG | - | chr1.3:74489530-74489549 | MS.gene75202:intron | 35.0% | |
| TGATTCATTAGAGTGAATCG+GGG | + | chr1.3:74490872-74490891 | None:intergenic | 35.0% | |
| TGATTGTAAACACAGAGAAC+TGG | + | chr1.3:74493455-74493474 | None:intergenic | 35.0% | |
| TGCATCTCATATTGAGGATA+TGG | - | chr1.3:74492580-74492599 | MS.gene75202:CDS | 35.0% | |
| TTAGTTATAGTCTTCTTGCG+AGG | - | chr1.3:74494069-74494088 | MS.gene75202:CDS | 35.0% | |
| TTCCATCATTTCTTCGATTG+GGG | + | chr1.3:74494280-74494299 | None:intergenic | 35.0% | |
| TTGTCAATTAGTGGCAATAG+TGG | - | chr1.3:74492012-74492031 | MS.gene75202:intron | 35.0% | |
| TTTACAGTCACCTAGAATGA+TGG | + | chr1.3:74489520-74489539 | None:intergenic | 35.0% | |
| TTTCAAGAGGAACAGAAACA+GGG | + | chr1.3:74494646-74494665 | None:intergenic | 35.0% | |
| TTTGATTGGACATGAGGATT+GGG | - | chr1.3:74490077-74490096 | MS.gene75202:intron | 35.0% | |
| TTTGCATCTACTTCTTCAGA+TGG | - | chr1.3:74489367-74489386 | MS.gene75202:intron | 35.0% | |
| ! | AAGCATTTTATCTGCATCCA+TGG | - | chr1.3:74490167-74490186 | MS.gene75202:intron | 35.0% |
| ! | AATGATGGAATTCTAGCTGT+TGG | - | chr1.3:74494290-74494309 | MS.gene75202:intron | 35.0% |
| ! | ATACTTGGTGAATAGACCAT+TGG | - | chr1.3:74491957-74491976 | MS.gene75202:intron | 35.0% |
| ! | CACCAACATTTTTCCAAAGA+TGG | + | chr1.3:74490350-74490369 | None:intergenic | 35.0% |
| ! | CTATTGATAACATTGCTCGT+AGG | - | chr1.3:74492434-74492453 | MS.gene75202:intron | 35.0% |
| ! | CTCTTCACTTTAGTTTCCTA+TGG | + | chr1.3:74492245-74492264 | None:intergenic | 35.0% |
| ! | CTTGACAAACATCCAGATTT+TGG | - | chr1.3:74491519-74491538 | MS.gene75202:intron | 35.0% |
| ! | GTAGAGGCATGACATATAAA+AGG | + | chr1.3:74494422-74494441 | None:intergenic | 35.0% |
| ! | GTTAGTAGTTGGTTGGTTAT+AGG | - | chr1.3:74491880-74491899 | MS.gene75202:intron | 35.0% |
| ! | TAAGCGCTTGTGATTTTGTT+CGG | - | chr1.3:74493724-74493743 | MS.gene75202:CDS | 35.0% |
| ! | TGGTTGACATTTGTTGAGTT+TGG | - | chr1.3:74493582-74493601 | MS.gene75202:intron | 35.0% |
| !! | AAAATGTTGGTGATGACAAC+TGG | - | chr1.3:74490358-74490377 | MS.gene75202:intron | 35.0% |
| !! | AATGCTTTGTGGTTGATAAC+AGG | + | chr1.3:74490154-74490173 | None:intergenic | 35.0% |
| !! | AGTTGTCTGCAATTTTGACA+CGG | + | chr1.3:74491257-74491276 | None:intergenic | 35.0% |
| !! | ATCTCTTTTGATTGGACATG+AGG | - | chr1.3:74490071-74490090 | MS.gene75202:intron | 35.0% |
| !! | ATTTTAGCACATGGATATGG+TGG | - | chr1.3:74490318-74490337 | MS.gene75202:intron | 35.0% |
| !! | GGAGATTCAATTTTAGCACA+TGG | - | chr1.3:74490309-74490328 | MS.gene75202:intron | 35.0% |
| !! | TTCCGTTGGTTCTAAATCTA+TGG | - | chr1.3:74489560-74489579 | MS.gene75202:CDS | 35.0% |
| !! | TTTTCAAGAGGAACAGAAAC+AGG | + | chr1.3:74494647-74494666 | None:intergenic | 35.0% |
| !! | TTTTGATTGGACATGAGGAT+TGG | - | chr1.3:74490076-74490095 | MS.gene75202:intron | 35.0% |
| AAAACGGCCAAATAGAGTTG+TGG | - | chr1.3:74494318-74494337 | MS.gene75202:intron | 40.0% | |
| AAACGGGAATGGCATATACA+GGG | - | chr1.3:74489969-74489988 | MS.gene75202:CDS | 40.0% | |
| AAGGACAGGACCTTCTATAT+AGG | + | chr1.3:74490016-74490035 | None:intergenic | 40.0% | |
| AATTGACAACTCCGTCTCTA+AGG | + | chr1.3:74492001-74492020 | None:intergenic | 40.0% | |
| ACAAGATTCACCTTTACTGC+GGG | - | chr1.3:74489652-74489671 | MS.gene75202:CDS | 40.0% | |
| ACAGACTCCACAACTCTATT+TGG | + | chr1.3:74494328-74494347 | None:intergenic | 40.0% | |
| ACAGATATGCTTGCATTCTG+AGG | + | chr1.3:74493506-74493525 | None:intergenic | 40.0% | |
| ACCTCCAATTGAAGATCAAC+TGG | - | chr1.3:74492879-74492898 | MS.gene75202:intron | 40.0% | |
| ACGCGTAAAATAAATGCCTG+GGG | + | chr1.3:74493956-74493975 | None:intergenic | 40.0% | |
| ATATGGGTCCATCCAAATGA+TGG | - | chr1.3:74492597-74492616 | MS.gene75202:CDS | 40.0% | |
| ATCAACCCCATTTGTATCAG+AGG | + | chr1.3:74492806-74492825 | None:intergenic | 40.0% | |
| ATCGGTGACTGATATAGCAT+GGG | - | chr1.3:74490413-74490432 | MS.gene75202:intron | 40.0% | |
| CAAAACGATCTAAGCCAAGT+TGG | + | chr1.3:74493193-74493212 | None:intergenic | 40.0% | |
| CAATTGAAGATCAACTGGCA+TGG | - | chr1.3:74492884-74492903 | MS.gene75202:intron | 40.0% | |
| CATGAGACCTCTGATACAAA+TGG | - | chr1.3:74492796-74492815 | MS.gene75202:intron | 40.0% | |
| CATGCCAGTTGATCTTCAAT+TGG | + | chr1.3:74492886-74492905 | None:intergenic | 40.0% | |
| CGACAAGACAGTGAAAATCT+GGG | - | chr1.3:74494166-74494185 | MS.gene75202:CDS | 40.0% | |
| CTAGCTGTTGGAATGGAAAA+CGG | - | chr1.3:74494302-74494321 | MS.gene75202:intron | 40.0% | |
| GAAATAGCAGCTAGAGTTGT+GGG | + | chr1.3:74492373-74492392 | None:intergenic | 40.0% | |
| GATCATGTTTAGTGCACACA+TGG | + | chr1.3:74492214-74492233 | None:intergenic | 40.0% | |
| GATGTCTGCATCTCATATTG+AGG | - | chr1.3:74492574-74492593 | MS.gene75202:CDS | 40.0% | |
| GATTCATCATGATGAATCCG+GGG | + | chr1.3:74490731-74490750 | None:intergenic | 40.0% | |
| GCTCACATGAATGTACAAAC+TGG | + | chr1.3:74489804-74489823 | None:intergenic | 40.0% | |
| GGACATATTGTCTACGTACT+TGG | - | chr1.3:74492552-74492571 | MS.gene75202:CDS | 40.0% | |
| GGATTATCTGGTCATGTTCT+TGG | - | chr1.3:74494108-74494127 | MS.gene75202:CDS | 40.0% | |
| GGTGTTAACTTTGACTGCAA+AGG | - | chr1.3:74491702-74491721 | MS.gene75202:intron | 40.0% | |
| GTAATGAGAAGTCCAAACTC+CGG | + | chr1.3:74489849-74489868 | None:intergenic | 40.0% | |
| GTGAACCTGTTGCAAATTCA+TGG | + | chr1.3:74494145-74494164 | None:intergenic | 40.0% | |
| TAAAGTGTACAACGGTGAGA+CGG | + | chr1.3:74493221-74493240 | None:intergenic | 40.0% | |
| TACAGCTTATGGTAAGCTGT+TGG | - | chr1.3:74491818-74491837 | MS.gene75202:intron | 40.0% | |
| TAGAAGGGAAACCTTAGAGA+CGG | - | chr1.3:74491987-74492006 | MS.gene75202:intron | 40.0% | |
| TAGCTTAACAGTGACACAGA+TGG | - | chr1.3:74493383-74493402 | MS.gene75202:intron | 40.0% | |
| TAGTGCACACATGGATTCTT+TGG | + | chr1.3:74492205-74492224 | None:intergenic | 40.0% | |
| TAGTGTGACAGCATTGTCTT+GGG | - | chr1.3:74494247-74494266 | MS.gene75202:CDS | 40.0% | |
| TATCACTACCAGCCATCATT+TGG | + | chr1.3:74492612-74492631 | None:intergenic | 40.0% | |
| TCACATAAACTCTATGGCCA+TGG | - | chr1.3:74492925-74492944 | MS.gene75202:intron | 40.0% | |
| TCATGTAAGGTATGCACTGT+TGG | - | chr1.3:74493000-74493019 | MS.gene75202:intron | 40.0% | |
| TCCATCCTCTTGTCTGTTAT+AGG | + | chr1.3:74494351-74494370 | None:intergenic | 40.0% | |
| TCCTATAACAGACAAGAGGA+TGG | - | chr1.3:74494347-74494366 | MS.gene75202:intron | 40.0% | |
| TCGTAGGTAGTTGACTGATA+GGG | - | chr1.3:74491739-74491758 | MS.gene75202:intron | 40.0% | |
| TCTGATACAAATGGGGTTGA+TGG | - | chr1.3:74492805-74492824 | MS.gene75202:intron | 40.0% | |
| TCTGTCCTATAACAGACAAG+AGG | - | chr1.3:74494343-74494362 | MS.gene75202:intron | 40.0% | |
| TGAAATAGCAGCTAGAGTTG+TGG | + | chr1.3:74492374-74492393 | None:intergenic | 40.0% | |
| TGAATCTCATCTTGAATCCC+CGG | - | chr1.3:74490711-74490730 | MS.gene75202:CDS | 40.0% | |
| TGAGACCTCTGATACAAATG+GGG | - | chr1.3:74492798-74492817 | MS.gene75202:intron | 40.0% | |
| TGGACAAGACTATGATGATC+TGG | - | chr1.3:74490187-74490206 | MS.gene75202:intron | 40.0% | |
| TGGATGAATGTGGTTACTGT+TGG | - | chr1.3:74490234-74490253 | MS.gene75202:intron | 40.0% | |
| TTAAGCTATGGGATTGCAAG+CGG | + | chr1.3:74493371-74493390 | None:intergenic | 40.0% | |
| TTATCCTAGCTTCGCCATTA+TGG | - | chr1.3:74492097-74492116 | MS.gene75202:intron | 40.0% | |
| ! | AAGCGCTTGTGATTTTGTTC+GGG | - | chr1.3:74493725-74493744 | MS.gene75202:CDS | 40.0% |
| ! | AGCTAAAAGGGCATACAGAT+TGG | - | chr1.3:74489821-74489840 | MS.gene75202:CDS | 40.0% |
| ! | AGTCTACAACTTGCTTCTTG+TGG | - | chr1.3:74494485-74494504 | MS.gene75202:CDS | 40.0% |
| ! | ATGCACTGTTGGTCTAACTA+TGG | - | chr1.3:74493011-74493030 | MS.gene75202:intron | 40.0% |
| ! | ATTTTGTTCGGGAGAGCTTA+TGG | - | chr1.3:74493736-74493755 | MS.gene75202:CDS | 40.0% |
| ! | CAACTTGGCTTAGATCGTTT+TGG | - | chr1.3:74493191-74493210 | MS.gene75202:intron | 40.0% |
| ! | CTGTGTCACTGTTAAGCTAT+GGG | + | chr1.3:74493382-74493401 | None:intergenic | 40.0% |
| ! | GCTTGTTGCTTCTTCATGTA+AGG | - | chr1.3:74492987-74493006 | MS.gene75202:intron | 40.0% |
| ! | TCTGTGTCACTGTTAAGCTA+TGG | + | chr1.3:74493383-74493402 | None:intergenic | 40.0% |
| ! | TGACAACTGGCTTACACAAA+AGG | - | chr1.3:74490371-74490390 | MS.gene75202:intron | 40.0% |
| ! | TGGAATTCTAGCTGTTGGAA+TGG | - | chr1.3:74494295-74494314 | MS.gene75202:intron | 40.0% |
| ! | TTTGGAGCACATCGATGTTA+TGG | - | chr1.3:74493600-74493619 | MS.gene75202:intron | 40.0% |
| !! | ACCATTGGCTCTTTGTAGAA+GGG | - | chr1.3:74491972-74491991 | MS.gene75202:intron | 40.0% |
| !! | ATCTATGGTAGCCTTATCGA+TGG | - | chr1.3:74489575-74489594 | MS.gene75202:CDS | 40.0% |
| !! | GATCATCATAGTCTTGTCCA+TGG | + | chr1.3:74490187-74490206 | None:intergenic | 40.0% |
| AAACACAGTTGGAACTGCGT+CGG | + | chr1.3:74492854-74492873 | None:intergenic | 45.0% | |
| AAAGTGTACAACGGTGAGAC+GGG | + | chr1.3:74493220-74493239 | None:intergenic | 45.0% | |
| AACCAACGGAAAAAGAGTCC+AGG | + | chr1.3:74489551-74489570 | None:intergenic | 45.0% | |
| AACCATAGTCATAGAAGGGC+TGG | - | chr1.3:74492643-74492662 | MS.gene75202:CDS | 45.0% | |
| AAGATTCACCTTTACTGCGG+GGG | - | chr1.3:74489654-74489673 | MS.gene75202:CDS | 45.0% | |
| AAGGAATGGATGCAGAGCAT+CGG | + | chr1.3:74492325-74492344 | None:intergenic | 45.0% | |
| ACCGATGCAAAATGACCAGA+GGG | + | chr1.3:74490399-74490418 | None:intergenic | 45.0% | |
| ACCTCTCCATTGATGCTTAC+AGG | + | chr1.3:74489871-74489890 | None:intergenic | 45.0% | |
| ACCTGTAAGCATCAATGGAG+AGG | - | chr1.3:74489867-74489886 | MS.gene75202:CDS | 45.0% | |
| ACGATTTGACCACTACATCC+AGG | + | chr1.3:74489609-74489628 | None:intergenic | 45.0% | |
| ACTACCAGCCATCATTTGGA+TGG | + | chr1.3:74492608-74492627 | None:intergenic | 45.0% | |
| AGAGAAACCTCGACTTTCCA+TGG | + | chr1.3:74491292-74491311 | None:intergenic | 45.0% | |
| AGCTAGAGTTGTGGGCAAAT+AGG | + | chr1.3:74492365-74492384 | None:intergenic | 45.0% | |
| AGTCTTGGTATGAGATTGCG+CGG | - | chr1.3:74491323-74491342 | MS.gene75202:intron | 45.0% | |
| ATATCATGGCCATGAACCTG+AGG | + | chr1.3:74491349-74491368 | None:intergenic | 45.0% | |
| CAAACGGGAATGGCATATAC+AGG | - | chr1.3:74489968-74489987 | MS.gene75202:CDS | 45.0% | |
| CAAGATTCACCTTTACTGCG+GGG | - | chr1.3:74489653-74489672 | MS.gene75202:CDS | 45.0% | |
| CAATAGCAGATTGCGGAAAC+TGG | + | chr1.3:74492420-74492439 | None:intergenic | 45.0% | |
| CAGTTTCTGAGCTGATGTAG+CGG | - | chr1.3:74492138-74492157 | MS.gene75202:intron | 45.0% | |
| CATCGGTGACTGATATAGCA+TGG | - | chr1.3:74490412-74490431 | MS.gene75202:intron | 45.0% | |
| CTCCCCAATCGAAGAAATGA+TGG | - | chr1.3:74494275-74494294 | MS.gene75202:intron | 45.0% | |
| CTCGTAGGTAGTTGACTGAT+AGG | - | chr1.3:74491738-74491757 | MS.gene75202:intron | 45.0% | |
| CTCTTCAAGATGGAGAGTCT+TGG | - | chr1.3:74491308-74491327 | MS.gene75202:intron | 45.0% | |
| CTGAAAAGACTTCTGGTGTG+TGG | - | chr1.3:74490214-74490233 | MS.gene75202:intron | 45.0% | |
| CTGTATATGCCATTCCCGTT+TGG | + | chr1.3:74489970-74489989 | None:intergenic | 45.0% | |
| CTTACACAAAAGGTTCCCTC+TGG | - | chr1.3:74490381-74490400 | MS.gene75202:intron | 45.0% | |
| GAGACGGAGTTGTCAATTAG+TGG | - | chr1.3:74492003-74492022 | MS.gene75202:intron | 45.0% | |
| GCCAGTTGATCTTCAATTGG+AGG | + | chr1.3:74492883-74492902 | None:intergenic | 45.0% | |
| GCGACAAGACAGTGAAAATC+TGG | - | chr1.3:74494165-74494184 | MS.gene75202:CDS | 45.0% | |
| GCTAGAGTTGTGGGCAAATA+GGG | + | chr1.3:74492364-74492383 | None:intergenic | 45.0% | |
| GCTGTCACACTACTCGTAAA+TGG | + | chr1.3:74494239-74494258 | None:intergenic | 45.0% | |
| GGAGGTTCAGTAAACACAGT+TGG | + | chr1.3:74492865-74492884 | None:intergenic | 45.0% | |
| GGATTTGGCTGTATACTCGT+AGG | - | chr1.3:74491723-74491742 | MS.gene75202:intron | 45.0% | |
| GGTCAAATCGTCCTTGCAAT+GGG | - | chr1.3:74489618-74489637 | MS.gene75202:CDS | 45.0% | |
| GGTGCAAATATGTCAGCTCT+TGG | - | chr1.3:74491541-74491560 | MS.gene75202:intron | 45.0% | |
| GTAGTGTGACAGCATTGTCT+TGG | - | chr1.3:74494246-74494265 | MS.gene75202:CDS | 45.0% | |
| GTCACACTACTCGTAAATGG+AGG | + | chr1.3:74494236-74494255 | None:intergenic | 45.0% | |
| GTCGAGGTTTCTCTTCAAGA+TGG | - | chr1.3:74491298-74491317 | MS.gene75202:intron | 45.0% | |
| TACAGATTGGATCCGGAGTT+TGG | - | chr1.3:74489834-74489853 | MS.gene75202:CDS | 45.0% | |
| TACCAGCCCTTCTATGACTA+TGG | + | chr1.3:74492648-74492667 | None:intergenic | 45.0% | |
| TATAGAAGGTCCTGTCCTTG+TGG | - | chr1.3:74490017-74490036 | MS.gene75202:intron | 45.0% | |
| TATATCAGCTAGCCATGACC+AGG | - | chr1.3:74490455-74490474 | MS.gene75202:intron | 45.0% | |
| TATCCAATCCTCCCATTGCA+AGG | + | chr1.3:74489632-74489651 | None:intergenic | 45.0% | |
| TCATGTTCTTGGAACCCACA+CGG | - | chr1.3:74494119-74494138 | MS.gene75202:CDS | 45.0% | |
| TCCCTTCTACAAAGAGCCAA+TGG | + | chr1.3:74491976-74491995 | None:intergenic | 45.0% | |
| TCTGGCATGGAGGAAAATTG+AGG | - | chr1.3:74494451-74494470 | MS.gene75202:CDS | 45.0% | |
| TGGCGACAAAGATACCTTTC+CGG | + | chr1.3:74489685-74489704 | None:intergenic | 45.0% | |
| TGGGATTCTATGGTGGTCAT+TGG | - | chr1.3:74490277-74490296 | MS.gene75202:intron | 45.0% | |
| TGGTCAAATCGTCCTTGCAA+TGG | - | chr1.3:74489617-74489636 | MS.gene75202:CDS | 45.0% | |
| TTATAGTCTTCTTGCGAGGC+AGG | - | chr1.3:74494073-74494092 | MS.gene75202:CDS | 45.0% | |
| TTATGCTCCATGGAAAGTCG+AGG | - | chr1.3:74491282-74491301 | MS.gene75202:intron | 45.0% | |
| TTCTGCCACAGCAGTAGATT+GGG | + | chr1.3:74493310-74493329 | None:intergenic | 45.0% | |
| TTCTGGTGTGTGGATGAATG+TGG | - | chr1.3:74490224-74490243 | MS.gene75202:intron | 45.0% | |
| TTGCAAATTCATGGCCGTGT+GGG | + | chr1.3:74494136-74494155 | None:intergenic | 45.0% | |
| ! | AAGGGCATACAGATTGGATC+CGG | - | chr1.3:74489827-74489846 | MS.gene75202:CDS | 45.0% |
| ! | AAGGGGAATCACCGTTTTGT+TGG | - | chr1.3:74491394-74491413 | MS.gene75202:intron | 45.0% |
| ! | CAATTTTCCTCCATGCCAGA+CGG | + | chr1.3:74494451-74494470 | None:intergenic | 45.0% |
| ! | CACACACCAGAAGTCTTTTC+AGG | + | chr1.3:74490216-74490235 | None:intergenic | 45.0% |
| ! | CATGTCCATAAGCGGTTTTC+AGG | - | chr1.3:74493772-74493791 | MS.gene75202:CDS | 45.0% |
| ! | GTTGGTTCATGGAAAGCAGT+TGG | - | chr1.3:74493345-74493364 | MS.gene75202:intron | 45.0% |
| !! | ATGGTGGATCGTTCCATCTT+TGG | - | chr1.3:74490334-74490353 | MS.gene75202:intron | 45.0% |
| !! | GACCATTGGCTCTTTGTAGA+AGG | - | chr1.3:74491971-74491990 | MS.gene75202:intron | 45.0% |
| !! | GATATAGCATGGGCTAGATC+TGG | - | chr1.3:74490423-74490442 | MS.gene75202:intron | 45.0% |
| !! | GATGGAAGCATTGTAGTACC+GGG | - | chr1.3:74494365-74494384 | MS.gene75202:intron | 45.0% |
| !! | GGATGGAAGCATTGTAGTAC+CGG | - | chr1.3:74494364-74494383 | MS.gene75202:intron | 45.0% |
| !! | TACAAATGGGGTTGATGGTC+TGG | - | chr1.3:74492810-74492829 | MS.gene75202:intron | 45.0% |
| !! | TATGGTAGCCTTATCGATGG+CGG | - | chr1.3:74489578-74489597 | MS.gene75202:CDS | 45.0% |
| !! | TCCCTCTGGTCATTTTGCAT+CGG | - | chr1.3:74490395-74490414 | MS.gene75202:intron | 45.0% |
| AACACAGTTGGAACTGCGTC+GGG | + | chr1.3:74492853-74492872 | None:intergenic | 50.0% | |
| AACTGGCATGGCACACACTT+TGG | - | chr1.3:74492896-74492915 | MS.gene75202:intron | 50.0% | |
| AAGAAGAAGAGCCAGCCACA+AGG | + | chr1.3:74490035-74490054 | None:intergenic | 50.0% | |
| AGGCAATTCCGCCATCGATA+AGG | + | chr1.3:74489589-74489608 | None:intergenic | 50.0% | |
| ATCGCCATAATGGCGAAGCT+AGG | + | chr1.3:74492104-74492123 | None:intergenic | 50.0% | |
| CAAATCGTCCTTGCAATGGG+AGG | - | chr1.3:74489621-74489640 | MS.gene75202:CDS | 50.0% | |
| CACCGATGCAAAATGACCAG+AGG | + | chr1.3:74490400-74490419 | None:intergenic | 50.0% | |
| CACGGCCATGAATTTGCAAC+AGG | - | chr1.3:74494137-74494156 | MS.gene75202:CDS | 50.0% | |
| CATAGAATCCCAGAGCACAG+TGG | + | chr1.3:74490269-74490288 | None:intergenic | 50.0% | |
| CATCAGCTCCGCCAACAAAA+CGG | + | chr1.3:74491408-74491427 | None:intergenic | 50.0% | |
| CGCTACATCAGCTCAGAAAC+TGG | + | chr1.3:74492140-74492159 | None:intergenic | 50.0% | |
| CTACAGTAAACCGTCTGGCA+TGG | - | chr1.3:74494438-74494457 | MS.gene75202:CDS | 50.0% | |
| CTACTGCTGTGGCAGAAGTA+TGG | - | chr1.3:74493313-74493332 | MS.gene75202:intron | 50.0% | |
| CTTCCGTGGATGCAACCAAA+GGG | + | chr1.3:74490125-74490144 | None:intergenic | 50.0% | |
| CTTCTGCCACAGCAGTAGAT+TGG | + | chr1.3:74493311-74493330 | None:intergenic | 50.0% | |
| CTTTGGTTGCATCCACGGAA+GGG | - | chr1.3:74490124-74490143 | MS.gene75202:intron | 50.0% | |
| GAACTAAGCCACTGTGCTCT+GGG | - | chr1.3:74490258-74490277 | MS.gene75202:intron | 50.0% | |
| GAGTGAATCGGGGTTCATTG+CGG | + | chr1.3:74490862-74490881 | None:intergenic | 50.0% | |
| GTACTTCCACTGACGAGTAG+TGG | - | chr1.3:74489412-74489431 | MS.gene75202:intron | 50.0% | |
| GTGACAGCATTGTCTTGGGT+TGG | - | chr1.3:74494251-74494270 | MS.gene75202:CDS | 50.0% | |
| GTTGCAAATTCATGGCCGTG+TGG | + | chr1.3:74494137-74494156 | None:intergenic | 50.0% | |
| TACGCGAACAAGAAGAGCAG+CGG | + | chr1.3:74494396-74494415 | None:intergenic | 50.0% | |
| TAGCTTCGCCATTATGGCGA+TGG | - | chr1.3:74492103-74492122 | MS.gene75202:intron | 50.0% | |
| TATGCCATTCCCGTTTGGCA+CGG | + | chr1.3:74489965-74489984 | None:intergenic | 50.0% | |
| TGCCAGACGGTTTACTGTAG+AGG | + | chr1.3:74494438-74494457 | None:intergenic | 50.0% | |
| TGCCTCTACAGTAAACCGTC+TGG | - | chr1.3:74494433-74494452 | MS.gene75202:CDS | 50.0% | |
| TGCGTCGGGAACAGTTTCAA+AGG | + | chr1.3:74492839-74492858 | None:intergenic | 50.0% | |
| TGGCAGCCTGAAAAGACTTC+TGG | - | chr1.3:74490207-74490226 | MS.gene75202:intron | 50.0% | |
| TTACGTAGCTCCGTGCCAAA+CGG | - | chr1.3:74489952-74489971 | MS.gene75202:CDS | 50.0% | |
| TTCCGTGGATGCAACCAAAG+GGG | + | chr1.3:74490124-74490143 | None:intergenic | 50.0% | |
| TTTGGTTGCATCCACGGAAG+GGG | - | chr1.3:74490125-74490144 | MS.gene75202:intron | 50.0% | |
| ! | CTGTGGCAGAAGTATGGCTT+TGG | - | chr1.3:74493319-74493338 | MS.gene75202:intron | 50.0% |
| ! | TGCCTGGACTCTTTTTCCGT+TGG | - | chr1.3:74489546-74489565 | MS.gene75202:CDS | 50.0% |
| !! | AGGGACACAAGCGGATTATC+TGG | - | chr1.3:74494096-74494115 | MS.gene75202:CDS | 50.0% |
| !! | CACTGTGCTCTGGGATTCTA+TGG | - | chr1.3:74490267-74490286 | MS.gene75202:intron | 50.0% |
| !! | GGGAATCACCGTTTTGTTGG+CGG | - | chr1.3:74491397-74491416 | MS.gene75202:intron | 50.0% |
| !! | TGTGCTCTGGGATTCTATGG+TGG | - | chr1.3:74490270-74490289 | MS.gene75202:intron | 50.0% |
| !! | TTATCGATGGCGGAATTGCC+TGG | - | chr1.3:74489588-74489607 | MS.gene75202:CDS | 50.0% |
| AACAGCCGCCATCGCCATAA+TGG | + | chr1.3:74492114-74492133 | None:intergenic | 55.0% | |
| ACCCCCTTTGGTTGCATCCA+CGG | - | chr1.3:74490119-74490138 | MS.gene75202:intron | 55.0% | |
| AGTCTTCTTGCGAGGCAGGA+GGG | - | chr1.3:74494077-74494096 | MS.gene75202:CDS | 55.0% | |
| ATAACAGGCTTCCCCTTCCG+TGG | + | chr1.3:74490139-74490158 | None:intergenic | 55.0% | |
| CAGTAAACCGTCTGGCATGG+AGG | - | chr1.3:74494441-74494460 | MS.gene75202:CDS | 55.0% | |
| CCTTCCGTGGATGCAACCAA+AGG | + | chr1.3:74490126-74490145 | None:intergenic | 55.0% | |
| CCTTTGGTTGCATCCACGGA+AGG | - | chr1.3:74490123-74490142 | MS.gene75202:intron | 55.0% | |
| CGAACTAAGCCACTGTGCTC+TGG | - | chr1.3:74490257-74490276 | MS.gene75202:intron | 55.0% | |
| CGGGAATGGCATATACAGGG+AGG | - | chr1.3:74489972-74489991 | MS.gene75202:CDS | 55.0% | |
| CGTCCTTGCAATGGGAGGAT+TGG | - | chr1.3:74489626-74489645 | MS.gene75202:CDS | 55.0% | |
| CTTCGCCATTATGGCGATGG+CGG | - | chr1.3:74492106-74492125 | MS.gene75202:intron | 55.0% | |
| GCGGAATTGCCTGGATGTAG+TGG | - | chr1.3:74489597-74489616 | MS.gene75202:CDS | 55.0% | |
| GGCTTACCACTACTCGTCAG+TGG | + | chr1.3:74489421-74489440 | None:intergenic | 55.0% | |
| GGGTCCATCCAAATGATGGC+TGG | - | chr1.3:74492601-74492620 | MS.gene75202:CDS | 55.0% | |
| GGTGGTCATTGGAGCCCAAA+TGG | - | chr1.3:74490288-74490307 | MS.gene75202:intron | 55.0% | |
| GGTTGAATGGCAACCCCCTT+TGG | - | chr1.3:74490107-74490126 | MS.gene75202:intron | 55.0% | |
| GTTCATTCAAACAGGGCCCC+AGG | - | chr1.3:74493937-74493956 | MS.gene75202:CDS | 55.0% | |
| TACGTAGCTCCGTGCCAAAC+GGG | - | chr1.3:74489953-74489972 | MS.gene75202:CDS | 55.0% | |
| TAGTCTTCTTGCGAGGCAGG+AGG | - | chr1.3:74494076-74494095 | MS.gene75202:CDS | 55.0% | |
| TCCGTGGATGCAACCAAAGG+GGG | + | chr1.3:74490123-74490142 | None:intergenic | 55.0% | |
| TTCACCTTTACTGCGGGGGA+AGG | - | chr1.3:74489658-74489677 | MS.gene75202:CDS | 55.0% | |
| AGAAGAGCAGCGGCGAAACC+CGG | + | chr1.3:74494386-74494405 | None:intergenic | 60.0% | |
| AGCTCCGTGCCAAACGGGAA+TGG | - | chr1.3:74489958-74489977 | MS.gene75202:CDS | 60.0% | |
| ATTGCGCGGCCTCAGGTTCA+TGG | - | chr1.3:74491337-74491356 | MS.gene75202:intron | 60.0% | |
| CTTTACTGCGGGGGAAGGAC+CGG | - | chr1.3:74489663-74489682 | MS.gene75202:CDS | 60.0% | |
| GAAGAGCCAGCCACAAGGAC+AGG | + | chr1.3:74490030-74490049 | None:intergenic | 60.0% | |
| GAAGGTCCTGTCCTTGTGGC+TGG | - | chr1.3:74490021-74490040 | MS.gene75202:intron | 60.0% | |
| GCAGGCCCAATCTACTGCTG+TGG | - | chr1.3:74493302-74493321 | MS.gene75202:intron | 60.0% | |
| GTATGAGATTGCGCGGCCTC+AGG | - | chr1.3:74491330-74491349 | MS.gene75202:intron | 60.0% | |
| CGAGGCAGGAGGGACACAAG+CGG | - | chr1.3:74494087-74494106 | MS.gene75202:CDS | 65.0% | |
| CGGTCCTTCCCCCGCAGTAA+AGG | + | chr1.3:74489665-74489684 | None:intergenic | 65.0% | |
| CTGCGGGGGAAGGACCGGAA+AGG | - | chr1.3:74489668-74489687 | MS.gene75202:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 74489343 | 74494738 | 74489343 | ID=MS.gene75202 |
| chr1.3 | mRNA | 74489343 | 74494738 | 74489343 | ID=MS.gene75202.t1;Parent=MS.gene75202 |
| chr1.3 | exon | 74494648 | 74494738 | 74494648 | ID=MS.gene75202.t1.exon1;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74494648 | 74494738 | 74494648 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| chr1.3 | exon | 74494392 | 74494552 | 74494392 | ID=MS.gene75202.t1.exon2;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74494392 | 74494552 | 74494392 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| chr1.3 | exon | 74493605 | 74494276 | 74493605 | ID=MS.gene75202.t1.exon3;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74493605 | 74494276 | 74493605 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| chr1.3 | exon | 74492489 | 74492810 | 74492489 | ID=MS.gene75202.t1.exon4;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74492489 | 74492810 | 74492489 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| chr1.3 | exon | 74491073 | 74491290 | 74491073 | ID=MS.gene75202.t1.exon5;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74491073 | 74491290 | 74491073 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| chr1.3 | exon | 74490598 | 74490775 | 74490598 | ID=MS.gene75202.t1.exon6;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74490598 | 74490775 | 74490598 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| chr1.3 | exon | 74489546 | 74490024 | 74489546 | ID=MS.gene75202.t1.exon7;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74489546 | 74490024 | 74489546 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| chr1.3 | exon | 74489343 | 74489366 | 74489343 | ID=MS.gene75202.t1.exon8;Parent=MS.gene75202.t1 |
| chr1.3 | CDS | 74489343 | 74489366 | 74489343 | ID=cds.MS.gene75202.t1;Parent=MS.gene75202.t1 |
| Gene Sequence |
| Protein sequence |
