Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75610.t1 | AES72034.2 | 98.4 | 365 | 5 | 1 | 1 | 365 | 1 | 364 | 9.30E-210 | 739.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75610.t1 | Q9FYF9 | 69.3 | 355 | 91 | 7 | 14 | 362 | 34 | 376 | 4.8e-138 | 492.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75610.t1 | G7JBZ1 | 98.4 | 365 | 5 | 1 | 1 | 365 | 1 | 364 | 6.7e-210 | 739.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055358 | MS.gene75610 | 0.804492 | 2.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75610.t1 | MTR_3g085330 | 98.356 | 365 | 5 | 1 | 1 | 365 | 1 | 364 | 0.0 | 741 |
| MS.gene75610.t1 | MTR_8g080640 | 74.405 | 336 | 73 | 2 | 9 | 341 | 34 | 359 | 0.0 | 521 |
| MS.gene75610.t1 | MTR_3g099300 | 62.315 | 337 | 112 | 3 | 9 | 343 | 2 | 325 | 1.41e-143 | 411 |
| MS.gene75610.t1 | MTR_2g045135 | 62.315 | 337 | 112 | 3 | 9 | 343 | 2 | 325 | 1.41e-143 | 411 |
| MS.gene75610.t1 | MTR_2g045140 | 58.934 | 319 | 113 | 4 | 9 | 322 | 2 | 307 | 9.21e-123 | 358 |
| MS.gene75610.t1 | MTR_3g099300 | 64.029 | 278 | 87 | 2 | 66 | 343 | 1 | 265 | 2.14e-121 | 352 |
| MS.gene75610.t1 | MTR_2g045140 | 60.000 | 260 | 88 | 3 | 66 | 322 | 1 | 247 | 6.86e-101 | 300 |
| MS.gene75610.t1 | MTR_2g045140 | 59.174 | 218 | 73 | 3 | 108 | 322 | 1 | 205 | 1.32e-77 | 239 |
| MS.gene75610.t1 | MTR_2g045140 | 56.853 | 197 | 69 | 3 | 129 | 322 | 1 | 184 | 1.60e-64 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75610.t1 | AT1G67340 | 70.262 | 343 | 87 | 5 | 17 | 358 | 38 | 366 | 3.18e-173 | 487 |
| MS.gene75610.t1 | AT5G50450 | 55.989 | 359 | 129 | 3 | 2 | 359 | 1 | 331 | 1.45e-137 | 395 |
Find 83 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGGTGCTGGTTCTGTTTC+TGG | 0.053970 | 3.3:+71282837 | MS.gene75610:CDS |
| TGTCCTTTGCTGAGTGATTT+TGG | 0.190426 | 3.3:+71282867 | MS.gene75610:CDS |
| GATATTCGAGGCGGGTTTCC+TGG | 0.252033 | 3.3:+71282948 | MS.gene75610:CDS |
| ATGAGGTTATGTTCGAATTC+TGG | 0.259191 | 3.3:+71282978 | MS.gene75610:CDS |
| GCTGGTTCTGTTTCTGGTTC+GGG | 0.299737 | 3.3:+71282843 | MS.gene75610:CDS |
| TACCATTCCAAGAGTGTAAC+AGG | 0.304317 | 3.3:-71282317 | None:intergenic |
| AGGAAGCGGCGCGTCGTTAA+TGG | 0.308133 | 3.3:+71282470 | MS.gene75610:CDS |
| TGCTGGTTCTGTTTCTGGTT+CGG | 0.313707 | 3.3:+71282842 | MS.gene75610:CDS |
| TGGTTGTAACGTTCCGGTTC+AGG | 0.315466 | 3.3:+71282887 | MS.gene75610:CDS |
| TGTGCACGCGCTGCATTTCT+CGG | 0.363700 | 3.3:+71282606 | MS.gene75610:CDS |
| CGCGCCGTCTTTGTATTCAT+TGG | 0.368841 | 3.3:+71282515 | MS.gene75610:CDS |
| GCGCTTGTCAAGCGCTTGAT+TGG | 0.371030 | 3.3:+71283075 | MS.gene75610:CDS |
| CTCAAACGCTGTGTTGATGC+TGG | 0.395843 | 3.3:+71282283 | MS.gene75610:CDS |
| AACTCATGTTTCCTTGTCTC+AGG | 0.404750 | 3.3:-71283011 | None:intergenic |
| ATTGAAGCCTGTTACACTCT+TGG | 0.412205 | 3.3:+71282310 | MS.gene75610:CDS |
| CATTGTTTACAAGACGGTTA+CGG | 0.429974 | 3.3:+71282657 | MS.gene75610:CDS |
| AACAGATGCAAAAGACTAAA+CGG | 0.431674 | 3.3:+71282169 | MS.gene75610:intron |
| CAACACAGCGTTTGAGAAAA+CGG | 0.444420 | 3.3:-71282276 | None:intergenic |
| GGTTTCCTGGACCGGGTATG+AGG | 0.445338 | 3.3:+71282961 | MS.gene75610:CDS |
| ACATGAGTTTCGAAGATGTT+CGG | 0.448702 | 3.3:+71283025 | MS.gene75610:CDS |
| AGGAGACTCACCCAGCGAAC+AGG | 0.452332 | 3.3:+71282907 | MS.gene75610:CDS |
| GAGGAGGAGGAACATGTTGC+CGG | 0.452656 | 3.3:+71283143 | MS.gene75610:CDS |
| GCTGACGTGGAGTGTTAACC+CGG | 0.456764 | 3.3:+71282782 | MS.gene75610:CDS |
| GCCAGTGGAGAGGTGGTTAG+AGG | 0.457892 | 3.3:+71283124 | MS.gene75610:CDS |
| GTTATTGCCGTTAGATAAAA+CGG | 0.459886 | 3.3:-71282745 | None:intergenic |
| GCTGGGTGAGTCTCCTGAAC+CGG | 0.464172 | 3.3:-71282900 | None:intergenic |
| TTGGCAGTGATTCAGTTCAA+TGG | 0.465205 | 3.3:+71282534 | MS.gene75610:CDS |
| GGAGAGGTGGTTAGAGGAGG+AGG | 0.467062 | 3.3:+71283130 | MS.gene75610:CDS |
| TTTCGAAGATGTTCGGTTTG+TGG | 0.474837 | 3.3:+71283032 | MS.gene75610:CDS |
| ATAGAGAGAACTATATCATC+AGG | 0.482596 | 3.3:-71281991 | None:intergenic |
| TCCTCTAACCACCTCTCCAC+TGG | 0.483960 | 3.3:-71283125 | None:intergenic |
| TCGAGGCGGGTTTCCTGGAC+CGG | 0.486003 | 3.3:+71282953 | MS.gene75610:CDS |
| TCCGTCATAAACCTGTTCGC+TGG | 0.486015 | 3.3:-71282918 | None:intergenic |
| GATATAGTTCTCTCTATACT+TGG | 0.489280 | 3.3:+71281997 | MS.gene75610:CDS |
| AACACCACCGTCACCTTCAC+CGG | 0.490736 | 3.3:-71283162 | None:intergenic |
| GTGATTCAGTTCAATGGAAG+TGG | 0.496025 | 3.3:+71282540 | MS.gene75610:CDS |
| CAAGGCGGAGTGTGCGCCAG+TGG | 0.498772 | 3.3:+71283109 | MS.gene75610:CDS |
| TGAGGTGGTTGGTTTGAACC+CGG | 0.521097 | 3.3:-71282801 | None:intergenic |
| ACAAACAACCGTTGCTGACG+TGG | 0.529455 | 3.3:+71282769 | MS.gene75610:CDS |
| GTTCGAATTCTGGTTGTGGA+AGG | 0.530016 | 3.3:+71282988 | MS.gene75610:CDS |
| TGATTGGAAGTTTCGACACA+AGG | 0.534148 | 3.3:+71283091 | MS.gene75610:CDS |
| TGTTTGCAAAACAGAGGAAG+CGG | 0.541749 | 3.3:+71282456 | MS.gene75610:CDS |
| CCGTCATAAACCTGTTCGCT+GGG | 0.542751 | 3.3:-71282917 | None:intergenic |
| TTATGTTCGAATTCTGGTTG+TGG | 0.545212 | 3.3:+71282984 | MS.gene75610:CDS |
| GAGGAACATGTTGCCGGTGA+AGG | 0.549146 | 3.3:+71283149 | MS.gene75610:CDS |
| AAAATCTGAAGGAGAATTTG+CGG | 0.550795 | 3.3:-71282034 | None:intergenic |
| ACGGAGTGGTTCGATATTCG+AGG | 0.557707 | 3.3:+71282936 | MS.gene75610:CDS |
| CATAACCTCATACCCGGTCC+AGG | 0.560065 | 3.3:-71282966 | None:intergenic |
| GCATTTCTCGGTCACATCGA+CGG | 0.562721 | 3.3:+71282618 | MS.gene75610:CDS |
| CGAGGCGGGTTTCCTGGACC+GGG | 0.564242 | 3.3:+71282954 | MS.gene75610:CDS |
| GTTAAACAGAACGTTATTGA+AGG | 0.570072 | 3.3:+71282681 | MS.gene75610:CDS |
| CGGAGTGTGCGCCAGTGGAG+AGG | 0.575589 | 3.3:+71283114 | MS.gene75610:CDS |
| ATCGACGGTTTACGTGAGCT+TGG | 0.585324 | 3.3:+71282633 | MS.gene75610:CDS |
| GAGGTGGTTGGTTTGAACCC+GGG | 0.585702 | 3.3:-71282800 | None:intergenic |
| AGTGTGCGCCAGTGGAGAGG+TGG | 0.586560 | 3.3:+71283117 | MS.gene75610:CDS |
| AAACACGAAGCTGAGGTGGT+TGG | 0.595586 | 3.3:-71282812 | None:intergenic |
| CTTGGTCATTGTTTACAAGA+CGG | 0.596462 | 3.3:+71282651 | MS.gene75610:CDS |
| AGCCTGTTACACTCTTGGAA+TGG | 0.601007 | 3.3:+71282315 | MS.gene75610:CDS |
| AGAACACTGATAAAATCTGA+AGG | 0.607669 | 3.3:-71282045 | None:intergenic |
| CAAAGACTTACGCGCCGGTG+TGG | 0.610989 | 3.3:+71282578 | MS.gene75610:CDS |
| AGTGGTTCGATATTCGAGGC+GGG | 0.622558 | 3.3:+71282940 | MS.gene75610:CDS |
| ATTCAGTTCAATGGAAGTGG+AGG | 0.623225 | 3.3:+71282543 | MS.gene75610:CDS |
| GCTAAAACACGAAGCTGAGG+TGG | 0.627721 | 3.3:-71282816 | None:intergenic |
| TTAACACTCCACGTCAGCAA+CGG | 0.629849 | 3.3:-71282777 | None:intergenic |
| AGAACGTTATTGAAGGTCGA+CGG | 0.630802 | 3.3:+71282688 | MS.gene75610:CDS |
| GTTGTGGAAGGCCTGAGACA+AGG | 0.631392 | 3.3:+71283000 | MS.gene75610:CDS |
| AGTGGAGAGGTGGTTAGAGG+AGG | 0.634916 | 3.3:+71283127 | MS.gene75610:CDS |
| CAACCAAAATCACTCAGCAA+AGG | 0.637304 | 3.3:-71282870 | None:intergenic |
| CCCAGCGAACAGGTTTATGA+CGG | 0.637472 | 3.3:+71282917 | MS.gene75610:CDS |
| CATGTTGCCGGTGAAGGTGA+CGG | 0.641096 | 3.3:+71283155 | MS.gene75610:CDS |
| CCAGCTAAAACACGAAGCTG+AGG | 0.643105 | 3.3:-71282819 | None:intergenic |
| TTCGAACATAACCTCATACC+CGG | 0.646462 | 3.3:-71282972 | None:intergenic |
| GCGTGCACATAAAGCCACAC+CGG | 0.649753 | 3.3:-71282592 | None:intergenic |
| AACGACAAAGACTTACGCGC+CGG | 0.652915 | 3.3:+71282573 | MS.gene75610:CDS |
| ATCTGAAGGAGAATTTGCGG+TGG | 0.661673 | 3.3:-71282031 | None:intergenic |
| TGGTGTTAACATTGATGAGG+TGG | 0.662483 | 3.3:+71283178 | MS.gene75610:CDS |
| GAGTGGTTCGATATTCGAGG+CGG | 0.662713 | 3.3:+71282939 | MS.gene75610:CDS |
| CGAACAGGTTTATGACGGAG+TGG | 0.663605 | 3.3:+71282922 | MS.gene75610:CDS |
| CTGACGTGGAGTGTTAACCC+GGG | 0.664204 | 3.3:+71282783 | MS.gene75610:CDS |
| CGGTGGTGTTAACATTGATG+AGG | 0.680359 | 3.3:+71283175 | MS.gene75610:CDS |
| ACTGCCAATGAATACAAAGA+CGG | 0.680538 | 3.3:-71282519 | None:intergenic |
| TTGGAAGTTTCGACACAAGG+CGG | 0.683789 | 3.3:+71283094 | MS.gene75610:CDS |
| GTTGCCGGTGAAGGTGACGG+TGG | 0.699219 | 3.3:+71283158 | MS.gene75610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTCTAATTTTTTGAG+TGG | - | chr3.3:71282344-71282363 | None:intergenic | 15.0% |
| !! | TTTTATTGTTTGCAAAACAG+AGG | + | chr3.3:71282450-71282469 | MS.gene75610:CDS | 25.0% |
| AAAATCTGAAGGAGAATTTG+CGG | - | chr3.3:71282037-71282056 | None:intergenic | 30.0% | |
| AACAGATGCAAAAGACTAAA+CGG | + | chr3.3:71282169-71282188 | MS.gene75610:intron | 30.0% | |
| AGAACACTGATAAAATCTGA+AGG | - | chr3.3:71282048-71282067 | None:intergenic | 30.0% | |
| ATAGAGAGAACTATATCATC+AGG | - | chr3.3:71281994-71282013 | None:intergenic | 30.0% | |
| GATATAGTTCTCTCTATACT+TGG | + | chr3.3:71281997-71282016 | MS.gene75610:CDS | 30.0% | |
| GTTAAACAGAACGTTATTGA+AGG | + | chr3.3:71282681-71282700 | MS.gene75610:CDS | 30.0% | |
| GTTATTGCCGTTAGATAAAA+CGG | - | chr3.3:71282748-71282767 | None:intergenic | 30.0% | |
| TATCAGTCAAACCTAAAAAC+TGG | + | chr3.3:71282239-71282258 | MS.gene75610:CDS | 30.0% | |
| !! | TAATGTTTTGTTCGAAGCTT+TGG | - | chr3.3:71282221-71282240 | None:intergenic | 30.0% |
| !!! | AAATCATGAGAAGTGTTTTG+TGG | - | chr3.3:71281958-71281977 | None:intergenic | 30.0% |
| ACATGAGTTTCGAAGATGTT+CGG | + | chr3.3:71283025-71283044 | MS.gene75610:CDS | 35.0% | |
| ACTGCCAATGAATACAAAGA+CGG | - | chr3.3:71282522-71282541 | None:intergenic | 35.0% | |
| ATGAGGTTATGTTCGAATTC+TGG | + | chr3.3:71282978-71282997 | MS.gene75610:CDS | 35.0% | |
| CATTGTTTACAAGACGGTTA+CGG | + | chr3.3:71282657-71282676 | MS.gene75610:CDS | 35.0% | |
| CTTGGTCATTGTTTACAAGA+CGG | + | chr3.3:71282651-71282670 | MS.gene75610:CDS | 35.0% | |
| ! | TTATGTTCGAATTCTGGTTG+TGG | + | chr3.3:71282984-71283003 | MS.gene75610:CDS | 35.0% |
| !!! | TGATTTTGGTTGTAACGTTC+CGG | + | chr3.3:71282881-71282900 | MS.gene75610:CDS | 35.0% |
| AACTCATGTTTCCTTGTCTC+AGG | - | chr3.3:71283014-71283033 | None:intergenic | 40.0% | |
| AGAACGTTATTGAAGGTCGA+CGG | + | chr3.3:71282688-71282707 | MS.gene75610:CDS | 40.0% | |
| ATTCAGTTCAATGGAAGTGG+AGG | + | chr3.3:71282543-71282562 | MS.gene75610:CDS | 40.0% | |
| ATTGAAGCCTGTTACACTCT+TGG | + | chr3.3:71282310-71282329 | MS.gene75610:CDS | 40.0% | |
| CAACACAGCGTTTGAGAAAA+CGG | - | chr3.3:71282279-71282298 | None:intergenic | 40.0% | |
| CAACCAAAATCACTCAGCAA+AGG | - | chr3.3:71282873-71282892 | None:intergenic | 40.0% | |
| GTGATTCAGTTCAATGGAAG+TGG | + | chr3.3:71282540-71282559 | MS.gene75610:CDS | 40.0% | |
| TGATTGGAAGTTTCGACACA+AGG | + | chr3.3:71283091-71283110 | MS.gene75610:CDS | 40.0% | |
| TGTTTGCAAAACAGAGGAAG+CGG | + | chr3.3:71282456-71282475 | MS.gene75610:CDS | 40.0% | |
| TTCGAACATAACCTCATACC+CGG | - | chr3.3:71282975-71282994 | None:intergenic | 40.0% | |
| TTGGCAGTGATTCAGTTCAA+TGG | + | chr3.3:71282534-71282553 | MS.gene75610:CDS | 40.0% | |
| ! | TACCATTCCAAGAGTGTAAC+AGG | - | chr3.3:71282320-71282339 | None:intergenic | 40.0% |
| ! | TGGTGTTAACATTGATGAGG+TGG | + | chr3.3:71283178-71283197 | MS.gene75610:CDS | 40.0% |
| ! | TGTCCTTTGCTGAGTGATTT+TGG | + | chr3.3:71282867-71282886 | MS.gene75610:CDS | 40.0% |
| ! | TTTCGAAGATGTTCGGTTTG+TGG | + | chr3.3:71283032-71283051 | MS.gene75610:CDS | 40.0% |
| AGCCTGTTACACTCTTGGAA+TGG | + | chr3.3:71282315-71282334 | MS.gene75610:CDS | 45.0% | |
| ATCTGAAGGAGAATTTGCGG+TGG | - | chr3.3:71282034-71282053 | None:intergenic | 45.0% | |
| TTAACACTCCACGTCAGCAA+CGG | - | chr3.3:71282780-71282799 | None:intergenic | 45.0% | |
| TTGGAAGTTTCGACACAAGG+CGG | + | chr3.3:71283094-71283113 | MS.gene75610:CDS | 45.0% | |
| TTGTCGTGTGTCTGCAGATT+CGG | + | chr3.3:71282427-71282446 | MS.gene75610:intron | 45.0% | |
| ! | CGGTGGTGTTAACATTGATG+AGG | + | chr3.3:71283175-71283194 | MS.gene75610:CDS | 45.0% |
| ! | GCAGAGTCACACCAGTTTTT+AGG | - | chr3.3:71282253-71282272 | None:intergenic | 45.0% |
| ! | GTTCGAATTCTGGTTGTGGA+AGG | + | chr3.3:71282988-71283007 | MS.gene75610:CDS | 45.0% |
| !! | TGCTGGTTCTGTTTCTGGTT+CGG | + | chr3.3:71282842-71282861 | MS.gene75610:CDS | 45.0% |
| !!! | CTCGCTGCCGTTTTATCTAA+CGG | + | chr3.3:71282738-71282757 | MS.gene75610:CDS | 45.0% |
| AAACACGAAGCTGAGGTGGT+TGG | - | chr3.3:71282815-71282834 | None:intergenic | 50.0% | |
| AACGACAAAGACTTACGCGC+CGG | + | chr3.3:71282573-71282592 | MS.gene75610:CDS | 50.0% | |
| ACAAACAACCGTTGCTGACG+TGG | + | chr3.3:71282769-71282788 | MS.gene75610:CDS | 50.0% | |
| ACGGAGTGGTTCGATATTCG+AGG | + | chr3.3:71282936-71282955 | MS.gene75610:CDS | 50.0% | |
| AGTGGTTCGATATTCGAGGC+GGG | + | chr3.3:71282940-71282959 | MS.gene75610:CDS | 50.0% | |
| ATCGACGGTTTACGTGAGCT+TGG | + | chr3.3:71282633-71282652 | MS.gene75610:CDS | 50.0% | |
| CCAGCTAAAACACGAAGCTG+AGG | - | chr3.3:71282822-71282841 | None:intergenic | 50.0% | |
| CCCAGCGAACAGGTTTATGA+CGG | + | chr3.3:71282917-71282936 | MS.gene75610:CDS | 50.0% | |
| CCGTCATAAACCTGTTCGCT+GGG | - | chr3.3:71282920-71282939 | None:intergenic | 50.0% | |
| CGCGCCGTCTTTGTATTCAT+TGG | + | chr3.3:71282515-71282534 | MS.gene75610:CDS | 50.0% | |
| GAGTGGTTCGATATTCGAGG+CGG | + | chr3.3:71282939-71282958 | MS.gene75610:CDS | 50.0% | |
| GCATTTCTCGGTCACATCGA+CGG | + | chr3.3:71282618-71282637 | MS.gene75610:CDS | 50.0% | |
| GCTAAAACACGAAGCTGAGG+TGG | - | chr3.3:71282819-71282838 | None:intergenic | 50.0% | |
| TCCGTCATAAACCTGTTCGC+TGG | - | chr3.3:71282921-71282940 | None:intergenic | 50.0% | |
| TGGTTGTAACGTTCCGGTTC+AGG | + | chr3.3:71282887-71282906 | MS.gene75610:CDS | 50.0% | |
| ! | CGAACAGGTTTATGACGGAG+TGG | + | chr3.3:71282922-71282941 | MS.gene75610:CDS | 50.0% |
| ! | CTCAAACGCTGTGTTGATGC+TGG | + | chr3.3:71282283-71282302 | MS.gene75610:CDS | 50.0% |
| !! | GCTGGTTCTGTTTCTGGTTC+GGG | + | chr3.3:71282843-71282862 | MS.gene75610:CDS | 50.0% |
| !! | TGAGGTGGTTGGTTTGAACC+CGG | - | chr3.3:71282804-71282823 | None:intergenic | 50.0% |
| !!! | CCTCAGCTTCGTGTTTTAGC+TGG | + | chr3.3:71282819-71282838 | MS.gene75610:CDS | 50.0% |
| !!! | CTTCGTGTTTTAGCTGGTGC+TGG | + | chr3.3:71282825-71282844 | MS.gene75610:CDS | 50.0% |
| AACACCACCGTCACCTTCAC+CGG | - | chr3.3:71283165-71283184 | None:intergenic | 55.0% | |
| AGTGGAGAGGTGGTTAGAGG+AGG | + | chr3.3:71283127-71283146 | MS.gene75610:CDS | 55.0% | |
| CATAACCTCATACCCGGTCC+AGG | - | chr3.3:71282969-71282988 | None:intergenic | 55.0% | |
| CATGTTGCCGGTGAAGGTGA+CGG | + | chr3.3:71283155-71283174 | MS.gene75610:CDS | 55.0% | |
| GAGGAACATGTTGCCGGTGA+AGG | + | chr3.3:71283149-71283168 | MS.gene75610:CDS | 55.0% | |
| GAGGAGGAGGAACATGTTGC+CGG | + | chr3.3:71283143-71283162 | MS.gene75610:CDS | 55.0% | |
| GCGCTTGTCAAGCGCTTGAT+TGG | + | chr3.3:71283075-71283094 | MS.gene75610:CDS | 55.0% | |
| GCGTGCACATAAAGCCACAC+CGG | - | chr3.3:71282595-71282614 | None:intergenic | 55.0% | |
| GTTGTGGAAGGCCTGAGACA+AGG | + | chr3.3:71283000-71283019 | MS.gene75610:CDS | 55.0% | |
| TCCTCTAACCACCTCTCCAC+TGG | - | chr3.3:71283128-71283147 | None:intergenic | 55.0% | |
| TGTGCACGCGCTGCATTTCT+CGG | + | chr3.3:71282606-71282625 | MS.gene75610:CDS | 55.0% | |
| ! | CTGACGTGGAGTGTTAACCC+GGG | + | chr3.3:71282783-71282802 | MS.gene75610:CDS | 55.0% |
| ! | GATATTCGAGGCGGGTTTCC+TGG | + | chr3.3:71282948-71282967 | MS.gene75610:CDS | 55.0% |
| ! | GCTGACGTGGAGTGTTAACC+CGG | + | chr3.3:71282782-71282801 | MS.gene75610:CDS | 55.0% |
| !! | GAGGTGGTTGGTTTGAACCC+GGG | - | chr3.3:71282803-71282822 | None:intergenic | 55.0% |
| !! | GCTGGTGCTGGTTCTGTTTC+TGG | + | chr3.3:71282837-71282856 | MS.gene75610:CDS | 55.0% |
| AGGAAGCGGCGCGTCGTTAA+TGG | + | chr3.3:71282470-71282489 | MS.gene75610:CDS | 60.0% | |
| AGGAGACTCACCCAGCGAAC+AGG | + | chr3.3:71282907-71282926 | MS.gene75610:CDS | 60.0% | |
| GCCAGTGGAGAGGTGGTTAG+AGG | + | chr3.3:71283124-71283143 | MS.gene75610:CDS | 60.0% | |
| GCTGGGTGAGTCTCCTGAAC+CGG | - | chr3.3:71282903-71282922 | None:intergenic | 60.0% | |
| GGAGAGGTGGTTAGAGGAGG+AGG | + | chr3.3:71283130-71283149 | MS.gene75610:CDS | 60.0% | |
| GGTTTCCTGGACCGGGTATG+AGG | + | chr3.3:71282961-71282980 | MS.gene75610:CDS | 60.0% | |
| ! | CAAAGACTTACGCGCCGGTG+TGG | + | chr3.3:71282578-71282597 | MS.gene75610:CDS | 60.0% |
| AGTGTGCGCCAGTGGAGAGG+TGG | + | chr3.3:71283117-71283136 | MS.gene75610:CDS | 65.0% | |
| ! | GTTGCCGGTGAAGGTGACGG+TGG | + | chr3.3:71283158-71283177 | MS.gene75610:CDS | 65.0% |
| ! | TCGAGGCGGGTTTCCTGGAC+CGG | + | chr3.3:71282953-71282972 | MS.gene75610:CDS | 65.0% |
| CAAGGCGGAGTGTGCGCCAG+TGG | + | chr3.3:71283109-71283128 | MS.gene75610:CDS | 70.0% | |
| CGGAGTGTGCGCCAGTGGAG+AGG | + | chr3.3:71283114-71283133 | MS.gene75610:CDS | 70.0% | |
| ! | CGAGGCGGGTTTCCTGGACC+GGG | + | chr3.3:71282954-71282973 | MS.gene75610:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 71281913 | 71283217 | 71281913 | ID=MS.gene75610 |
| chr3.3 | mRNA | 71281913 | 71283217 | 71281913 | ID=MS.gene75610.t1;Parent=MS.gene75610 |
| chr3.3 | exon | 71281913 | 71282073 | 71281913 | ID=MS.gene75610.t1.exon1;Parent=MS.gene75610.t1 |
| chr3.3 | CDS | 71281913 | 71282073 | 71281913 | ID=cds.MS.gene75610.t1;Parent=MS.gene75610.t1 |
| chr3.3 | exon | 71282174 | 71282336 | 71282174 | ID=MS.gene75610.t1.exon2;Parent=MS.gene75610.t1 |
| chr3.3 | CDS | 71282174 | 71282336 | 71282174 | ID=cds.MS.gene75610.t1;Parent=MS.gene75610.t1 |
| chr3.3 | exon | 71282444 | 71283217 | 71282444 | ID=MS.gene75610.t1.exon3;Parent=MS.gene75610.t1 |
| chr3.3 | CDS | 71282444 | 71283217 | 71282444 | ID=cds.MS.gene75610.t1;Parent=MS.gene75610.t1 |
| Gene Sequence |
| Protein sequence |
