Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75658.t1 | XP_003601703.1 | 98 | 792 | 16 | 0 | 1 | 792 | 115 | 906 | 0.00E+00 | 1525.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75658.t1 | O81852 | 78.2 | 792 | 171 | 1 | 1 | 792 | 127 | 916 | 0.0e+00 | 1239.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75658.t1 | G7JAT7 | 98.0 | 792 | 16 | 0 | 1 | 792 | 115 | 906 | 0.0e+00 | 1525.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050787 | MS.gene75658 | 0.814336 | 1.62E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75658.t1 | MTR_3g084500 | 97.980 | 792 | 16 | 0 | 1 | 792 | 115 | 906 | 0.0 | 1602 |
| MS.gene75658.t1 | MTR_3g084500 | 97.925 | 723 | 15 | 0 | 70 | 792 | 14 | 736 | 0.0 | 1465 |
| MS.gene75658.t1 | MTR_8g083210 | 84.470 | 792 | 123 | 0 | 1 | 792 | 125 | 916 | 0.0 | 1407 |
| MS.gene75658.t1 | MTR_8g083210 | 84.470 | 792 | 123 | 0 | 1 | 792 | 118 | 909 | 0.0 | 1405 |
| MS.gene75658.t1 | MTR_3g084500 | 97.959 | 686 | 14 | 0 | 107 | 792 | 1 | 686 | 0.0 | 1387 |
| MS.gene75658.t1 | MTR_3g079330 | 33.690 | 374 | 217 | 8 | 433 | 782 | 3 | 369 | 2.62e-53 | 189 |
| MS.gene75658.t1 | MTR_7g083920 | 27.765 | 425 | 260 | 12 | 23 | 430 | 35 | 429 | 7.06e-41 | 156 |
| MS.gene75658.t1 | MTR_7g083920 | 27.765 | 425 | 260 | 12 | 23 | 430 | 142 | 536 | 4.62e-40 | 156 |
| MS.gene75658.t1 | MTR_6g033260 | 26.174 | 447 | 288 | 11 | 1 | 431 | 119 | 539 | 2.19e-36 | 145 |
| MS.gene75658.t1 | MTR_6g033260 | 26.244 | 442 | 296 | 11 | 1 | 431 | 119 | 541 | 4.68e-36 | 144 |
| MS.gene75658.t1 | MTR_6g033260 | 26.429 | 420 | 267 | 11 | 1 | 404 | 119 | 512 | 7.87e-31 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75658.t1 | AT4G19710 | 78.157 | 792 | 171 | 1 | 1 | 792 | 127 | 916 | 0.0 | 1296 |
| MS.gene75658.t1 | AT1G31230 | 76.515 | 792 | 184 | 1 | 1 | 792 | 122 | 911 | 0.0 | 1248 |
| MS.gene75658.t1 | AT4G19710 | 76.966 | 712 | 162 | 1 | 1 | 712 | 127 | 836 | 0.0 | 1148 |
| MS.gene75658.t1 | AT5G21060 | 34.584 | 373 | 211 | 10 | 438 | 784 | 8 | 373 | 2.47e-54 | 192 |
| MS.gene75658.t1 | AT5G21060 | 34.584 | 373 | 211 | 10 | 438 | 784 | 8 | 373 | 2.84e-54 | 192 |
| MS.gene75658.t1 | AT5G21060 | 34.133 | 375 | 208 | 11 | 438 | 784 | 8 | 371 | 3.54e-54 | 192 |
| MS.gene75658.t1 | AT3G02020 | 27.149 | 442 | 275 | 12 | 23 | 447 | 147 | 558 | 1.06e-37 | 149 |
| MS.gene75658.t1 | AT5G13280 | 27.506 | 429 | 264 | 12 | 19 | 430 | 146 | 544 | 1.79e-36 | 145 |
| MS.gene75658.t1 | AT5G14060 | 26.636 | 428 | 263 | 12 | 23 | 430 | 146 | 542 | 3.17e-36 | 144 |
| MS.gene75658.t1 | AT5G14060 | 26.636 | 428 | 263 | 12 | 23 | 430 | 146 | 542 | 3.17e-36 | 144 |
| MS.gene75658.t1 | AT5G14060 | 28.165 | 316 | 199 | 8 | 23 | 330 | 146 | 441 | 6.85e-28 | 118 |
Find 171 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCGGTTCTTACTCTTAA+TGG | 0.142845 | 3.3:-70757353 | None:intergenic |
| GAAAACTCCTCGTCAAATTT+TGG | 0.147615 | 3.3:-70757485 | None:intergenic |
| ATAATTGGACCTGGATTAAT+TGG | 0.182484 | 3.3:+70755151 | MS.gene75658:CDS |
| CAATTATGGGCGCGATATTC+AGG | 0.184677 | 3.3:+70753299 | MS.gene75658:CDS |
| CATCTTGTGCAGTCTTATTT+TGG | 0.195740 | 3.3:+70753733 | MS.gene75658:intron |
| TGACTTCTCCGCAGCAATTA+TGG | 0.200786 | 3.3:+70753285 | MS.gene75658:CDS |
| AAAATATTCCTTATTATAAT+TGG | 0.206918 | 3.3:-70753808 | None:intergenic |
| ACCATGGCAATGGGCATAAT+TGG | 0.214004 | 3.3:+70755136 | MS.gene75658:CDS |
| GGAGCTGGTCTTCCCATTAT+TGG | 0.217397 | 3.3:+70756458 | MS.gene75658:CDS |
| CATTTCAAATTGCAGTATTT+TGG | 0.217640 | 3.3:+70754558 | MS.gene75658:CDS |
| CCTTGTGTCCATCCATTTGC+AGG | 0.225260 | 3.3:-70753089 | None:intergenic |
| TCAAGATGTTGGAAATTTAA+AGG | 0.245840 | 3.3:+70751408 | MS.gene75658:CDS |
| CATCCATTTGCACAATTATC+TGG | 0.247353 | 3.3:+70757719 | MS.gene75658:CDS |
| TTTGACAGCGCTTTGTTTGC+TGG | 0.257116 | 3.3:+70754361 | MS.gene75658:CDS |
| TTCCCATTATTGGCACTTTA+CGG | 0.257376 | 3.3:+70756468 | MS.gene75658:CDS |
| CTCTCTGCTTCTAGTATTTG+AGG | 0.275251 | 3.3:+70756381 | MS.gene75658:intron |
| GGCAGCTGTTGGCCAGAAAA+TGG | 0.279914 | 3.3:+70754579 | MS.gene75658:CDS |
| ACTGGAATGGCTGGTGTTCC+AGG | 0.296123 | 3.3:+70754099 | MS.gene75658:CDS |
| AACATTGATTTGCGTGTAAT+GGG | 0.300206 | 3.3:+70755417 | MS.gene75658:CDS |
| TCCCATTATTGGCACTTTAC+GGG | 0.305246 | 3.3:+70756469 | MS.gene75658:CDS |
| AAAAGGTGAAGCGGCTGATT+TGG | 0.310156 | 3.3:+70755897 | MS.gene75658:CDS |
| CTGAACAGAGACTTAATAAA+TGG | 0.319803 | 3.3:+70753170 | MS.gene75658:CDS |
| GCTAGAGCTTTCTGATATTC+CGG | 0.325511 | 3.3:+70757310 | MS.gene75658:CDS |
| ATAATTCTTGCGAGGGAATC+TGG | 0.325746 | 3.3:+70757281 | MS.gene75658:CDS |
| TTACGACTTGCTTCATATCT+TGG | 0.328731 | 3.3:+70757854 | MS.gene75658:CDS |
| ATGGCATACCAATTATAATA+AGG | 0.331452 | 3.3:+70753800 | MS.gene75658:CDS |
| GTAGCAATGATTACCTTAGA+TGG | 0.335226 | 3.3:-70753205 | None:intergenic |
| GTACTCTCTTAATCCATCTA+AGG | 0.351418 | 3.3:+70753192 | MS.gene75658:CDS |
| GTTCTTACTCTTAATGGTTC+CGG | 0.356717 | 3.3:-70757347 | None:intergenic |
| GCCCCGTAAAGTGCCAATAA+TGG | 0.358952 | 3.3:-70756471 | None:intergenic |
| TAAGCGAGAAGATTCTATAA+AGG | 0.360058 | 3.3:+70755072 | MS.gene75658:CDS |
| TTGGCACTTGTAAATGTAGA+AGG | 0.362262 | 3.3:+70753937 | MS.gene75658:CDS |
| GACTTCTCCGCAGCAATTAT+GGG | 0.362658 | 3.3:+70753286 | MS.gene75658:CDS |
| TGCAAATTGAAGGAATCTTC+AGG | 0.364806 | 3.3:+70756519 | MS.gene75658:CDS |
| AAACATTGATTTGCGTGTAA+TGG | 0.370904 | 3.3:+70755416 | MS.gene75658:CDS |
| GTTTGCTGGGCGTATTTCTC+AGG | 0.372575 | 3.3:+70754375 | MS.gene75658:CDS |
| TGTTCAGTTTCCAAGTAATC+AGG | 0.373131 | 3.3:-70753154 | None:intergenic |
| TATCAGAAAGCTCTAGCTTT+AGG | 0.381405 | 3.3:-70757304 | None:intergenic |
| TTACGGGGCCTTCTCGAAAC+TGG | 0.387949 | 3.3:+70756485 | MS.gene75658:CDS |
| TTACATCTTTAATAACTTCA+AGG | 0.405718 | 3.3:+70756786 | MS.gene75658:CDS |
| TTGACAGCGCTTTGTTTGCT+GGG | 0.407848 | 3.3:+70754362 | MS.gene75658:CDS |
| GGTATGCCATAGCGAATAAC+AGG | 0.407991 | 3.3:-70753787 | None:intergenic |
| TCAAGTTGATCCTGATTACT+TGG | 0.408876 | 3.3:+70753144 | MS.gene75658:CDS |
| GTGACTTGTGCACCAGCTCC+TGG | 0.411867 | 3.3:-70757806 | None:intergenic |
| CCCCGTAAAGTGCCAATAAT+GGG | 0.412176 | 3.3:-70756470 | None:intergenic |
| GGGCTCGTCAAGTCACCATT+TGG | 0.412189 | 3.3:+70753320 | MS.gene75658:CDS |
| TCAAATTTGCATCAAGATGT+TGG | 0.416184 | 3.3:+70751397 | MS.gene75658:CDS |
| AGAGAAATTCGAGAGGAAAA+AGG | 0.432621 | 3.3:+70755880 | MS.gene75658:CDS |
| ACGGCACAAGAATTGTTTGA+TGG | 0.436063 | 3.3:+70751352 | MS.gene75658:CDS |
| CAAGAAGAGGCTGACACTGC+TGG | 0.444680 | 3.3:+70757515 | MS.gene75658:CDS |
| TCCTTTACTGACTTAGTTGT+GGG | 0.448104 | 3.3:+70752840 | MS.gene75658:CDS |
| AAAAGGGTGGCACTAACTCC+TGG | 0.451346 | 3.3:-70754610 | None:intergenic |
| TGAAGAGAAGCATAGCTTAA+CGG | 0.451830 | 3.3:+70751333 | MS.gene75658:CDS |
| CAGAAAATGGCAAGTACTCC+AGG | 0.457783 | 3.3:+70754592 | MS.gene75658:CDS |
| CAGTCTACTAAAACCGTGTT+TGG | 0.459411 | 3.3:-70755958 | None:intergenic |
| CATCCACAAGGCTGAAGCTC+AGG | 0.460872 | 3.3:+70751279 | MS.gene75658:CDS |
| GGTAGACGTGACTAATCAAA+AGG | 0.462124 | 3.3:+70757664 | MS.gene75658:CDS |
| ATTTGACTTACAAATTATCA+AGG | 0.464676 | 3.3:-70755464 | None:intergenic |
| TACTTCTATGAAGCTACTGT+TGG | 0.467919 | 3.3:+70756437 | MS.gene75658:CDS |
| GACAGATCATCCCTTGGATC+TGG | 0.468935 | 3.3:-70756865 | None:intergenic |
| GAGCCAGATAATTGTGCAAA+TGG | 0.471377 | 3.3:-70757722 | None:intergenic |
| TCTAAGGTAATCATTGCTAC+TGG | 0.476290 | 3.3:+70753208 | MS.gene75658:CDS |
| CCCATTATTGGCACTTTACG+GGG | 0.477220 | 3.3:+70756470 | MS.gene75658:CDS |
| ACCATCAACATCGGTCCAAA+TGG | 0.477547 | 3.3:-70753335 | None:intergenic |
| CCTGAGCCAATGCATTGAAA+AGG | 0.477917 | 3.3:-70754627 | None:intergenic |
| TCACAAACCACCATGGCAAT+GGG | 0.479222 | 3.3:+70755127 | MS.gene75658:CDS |
| CAATGTTATTATGATATCTC+AGG | 0.481310 | 3.3:+70754164 | MS.gene75658:CDS |
| AATAGAAGGATGGCAGATCT+TGG | 0.482872 | 3.3:-70753851 | None:intergenic |
| TTTAGCGCAGTAAAAGAGGT+TGG | 0.488466 | 3.3:+70754138 | MS.gene75658:CDS |
| TGCGCAGCCAGTCATCATAA+TGG | 0.489412 | 3.3:-70756005 | None:intergenic |
| GACAAAATATTGCAAATTGA+AGG | 0.491595 | 3.3:+70756509 | MS.gene75658:CDS |
| ATTAGTCCTGTTATTCGCTA+TGG | 0.491955 | 3.3:+70753781 | MS.gene75658:CDS |
| ACTGACTTAGTTGTGGGACA+TGG | 0.492278 | 3.3:+70752846 | MS.gene75658:CDS |
| TTTGCGTGTAATGGGGATCA+TGG | 0.494518 | 3.3:+70755425 | MS.gene75658:CDS |
| CTTGTGTCCATCCATTTGCA+GGG | 0.495349 | 3.3:-70753088 | None:intergenic |
| ATCTTTAATAACTTCAAGGA+TGG | 0.496607 | 3.3:+70756790 | MS.gene75658:CDS |
| AAAATAGTACTGGCGGTACC+TGG | 0.498155 | 3.3:-70754117 | None:intergenic |
| ATCCTTTACTGACTTAGTTG+TGG | 0.498349 | 3.3:+70752839 | MS.gene75658:CDS |
| AAAAGCTATAGCTGAGGTGT+TGG | 0.501442 | 3.3:+70754330 | MS.gene75658:CDS |
| AGATTCTATAAAGGCTCTGC+GGG | 0.501469 | 3.3:+70755081 | MS.gene75658:CDS |
| TATCCTGAGCTTCAGCCTTG+TGG | 0.505692 | 3.3:-70751282 | None:intergenic |
| ACCATTTGGACCGATGTTGA+TGG | 0.508173 | 3.3:+70753334 | MS.gene75658:CDS |
| GTTGCTGAAGCAAAGGAAGC+AGG | 0.509400 | 3.3:+70756832 | MS.gene75658:CDS |
| TGGAACTGATGTAGCAAGAA+AGG | 0.509480 | 3.3:+70756888 | MS.gene75658:CDS |
| GATCCAAGGGATGATCTGTC+TGG | 0.511718 | 3.3:+70756868 | MS.gene75658:CDS |
| ACTTGATCAGCTAAGGGATC+AGG | 0.512149 | 3.3:+70755183 | MS.gene75658:CDS |
| TCCAATTATGCCCATTGCCA+TGG | 0.512803 | 3.3:-70755137 | None:intergenic |
| AATTATGGGCGCGATATTCA+GGG | 0.512887 | 3.3:+70753300 | MS.gene75658:CDS |
| TCCGGTTGAAAATCTTGTGC+CGG | 0.514423 | 3.3:+70757328 | MS.gene75658:CDS |
| GGTTTGTGAGTCATAAAATC+TGG | 0.515634 | 3.3:-70755113 | None:intergenic |
| CACTGTCTTATCAAGAGGCA+TGG | 0.517169 | 3.3:+70753627 | MS.gene75658:CDS |
| ATCATAATGGCTTGCTATGG+CGG | 0.519320 | 3.3:-70755992 | None:intergenic |
| CTGACTTAGTTGTGGGACAT+GGG | 0.523976 | 3.3:+70752847 | MS.gene75658:CDS |
| CTGAGCCAATGCATTGAAAA+GGG | 0.524842 | 3.3:-70754626 | None:intergenic |
| GCACACTACTTGATCAGCTA+AGG | 0.525209 | 3.3:+70755176 | MS.gene75658:CDS |
| AGAAAGGGACTCCCTGCAAA+TGG | 0.528240 | 3.3:+70753077 | MS.gene75658:intron |
| CCTCTGATAGTCCGTGGACC+AGG | 0.529210 | 3.3:+70757788 | MS.gene75658:CDS |
| GAAGACACTGTCTTATCAAG+AGG | 0.529922 | 3.3:+70753622 | MS.gene75658:CDS |
| CTCACAAACCACCATGGCAA+TGG | 0.529985 | 3.3:+70755126 | MS.gene75658:CDS |
| ATAGTCCGTGGACCAGGAGC+TGG | 0.530530 | 3.3:+70757794 | MS.gene75658:CDS |
| CAGATAATTGTGCAAATGGA+TGG | 0.531821 | 3.3:-70757718 | None:intergenic |
| TAATTGGACCTGGATTAATT+GGG | 0.533041 | 3.3:+70755152 | MS.gene75658:CDS |
| CCATCTCTCTTGAGAGTAGT+GGG | 0.533662 | 3.3:-70753259 | None:intergenic |
| CTTTACAACGATAGACAACT+TGG | 0.533740 | 3.3:+70753918 | MS.gene75658:CDS |
| GTGCACCAGCTCCTGGTCCA+CGG | 0.536145 | 3.3:-70757799 | None:intergenic |
| TAGCAAGCCATTATGATGAC+TGG | 0.539883 | 3.3:+70755998 | MS.gene75658:CDS |
| TATAGCAAGGATATTTATGT+TGG | 0.541082 | 3.3:-70755011 | None:intergenic |
| TATAGTGCAGATCCTAGAAA+AGG | 0.542051 | 3.3:+70753361 | MS.gene75658:CDS |
| ATATTAAAAGATTATGTCAA+AGG | 0.543405 | 3.3:+70753895 | MS.gene75658:CDS |
| TGAGGTTAAGAGCTCTTCAA+AGG | 0.543432 | 3.3:+70756399 | MS.gene75658:CDS |
| AATTATGCCCATTGCCATGG+TGG | 0.544162 | 3.3:-70755134 | None:intergenic |
| TCCCACAACTAAGTCAGTAA+AGG | 0.544287 | 3.3:-70752841 | None:intergenic |
| TTGTGGGACATGGGGAGCTG+TGG | 0.547165 | 3.3:+70752856 | MS.gene75658:CDS |
| TTATTGCAGGGGAATCGACT+TGG | 0.547464 | 3.3:+70755849 | MS.gene75658:intron |
| TCCATCTCTCTTGAGAGTAG+TGG | 0.550339 | 3.3:-70753260 | None:intergenic |
| GTGAGTCATAAAATCTGGAA+TGG | 0.551255 | 3.3:-70755108 | None:intergenic |
| TATGAAGCTACTGTTGGAGC+TGG | 0.552013 | 3.3:+70756443 | MS.gene75658:CDS |
| TGAGGTAGTTGCTGAAGCAA+AGG | 0.555717 | 3.3:+70756825 | MS.gene75658:CDS |
| GGGGAATCGACTTGGTAAAG+TGG | 0.555762 | 3.3:+70755857 | MS.gene75658:intron |
| TTATGATGACTGGCTGCGCA+AGG | 0.556068 | 3.3:+70756008 | MS.gene75658:CDS |
| AGGGACTCCCTGCAAATGGA+TGG | 0.556923 | 3.3:+70753081 | MS.gene75658:CDS |
| AGTGTGCTCCCAATTAATCC+AGG | 0.560803 | 3.3:-70755160 | None:intergenic |
| GCTGGTGCACAAGTCACAGC+TGG | 0.561903 | 3.3:+70757812 | MS.gene75658:CDS |
| CCCACTACTCTCAAGAGAGA+TGG | 0.565006 | 3.3:+70753259 | MS.gene75658:CDS |
| GTCATCATAATGGCTTGCTA+TGG | 0.567164 | 3.3:-70755995 | None:intergenic |
| TTATCAAGAGGCATGGGAGA+TGG | 0.567207 | 3.3:+70753634 | MS.gene75658:CDS |
| GGTATTGAGATACGTGGGAG+TGG | 0.569260 | 3.3:+70757643 | MS.gene75658:intron |
| ATGCTTCAAGCTATTGACAT+AGG | 0.569687 | 3.3:+70751433 | MS.gene75658:CDS |
| CCTGCAAATGGATGGACACA+AGG | 0.574446 | 3.3:+70753089 | MS.gene75658:CDS |
| ACAGGTGATAATTCTTGCGA+GGG | 0.575424 | 3.3:+70757274 | MS.gene75658:intron |
| CTGAGATATCATAATAACAT+TGG | 0.576835 | 3.3:-70754163 | None:intergenic |
| AACAACCTTGTGCTATAGCA+AGG | 0.580471 | 3.3:-70755024 | None:intergenic |
| TTGCGTGTAATGGGGATCAT+GGG | 0.583341 | 3.3:+70755426 | MS.gene75658:CDS |
| GGTGCACAAGTCACAGCTGG+TGG | 0.583364 | 3.3:+70757815 | MS.gene75658:CDS |
| TACAGGTGATAATTCTTGCG+AGG | 0.589324 | 3.3:+70757273 | MS.gene75658:intron |
| CGTGACTAATCAAAAGGGAA+TGG | 0.593201 | 3.3:+70757670 | MS.gene75658:CDS |
| GTTCCAGACAGATCATCCCT+TGG | 0.593893 | 3.3:-70756871 | None:intergenic |
| GCAATGGGCATAATTGGACC+TGG | 0.598231 | 3.3:+70755142 | MS.gene75658:CDS |
| TGACTTAGTTGTGGGACATG+GGG | 0.601011 | 3.3:+70752848 | MS.gene75658:CDS |
| ACTGTCTTATCAAGAGGCAT+GGG | 0.602739 | 3.3:+70753628 | MS.gene75658:CDS |
| CACACTACTTGATCAGCTAA+GGG | 0.604044 | 3.3:+70755177 | MS.gene75658:CDS |
| GTTATACTGAACCAGATCCA+AGG | 0.604842 | 3.3:+70756854 | MS.gene75658:CDS |
| CCTGGTCCACGGACTATCAG+AGG | 0.606662 | 3.3:-70757788 | None:intergenic |
| TATGATGACTGGCTGCGCAA+GGG | 0.608656 | 3.3:+70756009 | MS.gene75658:CDS |
| AAATCATGTTATACCAAACA+CGG | 0.611522 | 3.3:+70755945 | MS.gene75658:CDS |
| GTAGACGTGACTAATCAAAA+GGG | 0.615782 | 3.3:+70757665 | MS.gene75658:CDS |
| ATCGTGTTTACCTCACTAAG+TGG | 0.617311 | 3.3:-70756072 | None:intergenic |
| TGGCACTTGTAAATGTAGAA+GGG | 0.620113 | 3.3:+70753938 | MS.gene75658:CDS |
| TTGAAGGTATTGAGATACGT+GGG | 0.620162 | 3.3:+70757638 | MS.gene75658:intron |
| TTATACTGAACCAGATCCAA+GGG | 0.626685 | 3.3:+70756855 | MS.gene75658:CDS |
| TCAACTTGATCATCACGAGT+AGG | 0.630309 | 3.3:-70753130 | None:intergenic |
| ACATTGATTTGCGTGTAATG+GGG | 0.630578 | 3.3:+70755418 | MS.gene75658:CDS |
| AGAAGTAAAAGCTATAGCTG+AGG | 0.635029 | 3.3:+70754324 | MS.gene75658:CDS |
| GATCTTGGTTCCAGAAGCAG+AGG | 0.638422 | 3.3:-70753836 | None:intergenic |
| CACGAGTAGGATTTACAATG+AGG | 0.639826 | 3.3:-70753117 | None:intergenic |
| AAATTCAGGACCACTTAGTG+AGG | 0.640316 | 3.3:+70756062 | MS.gene75658:CDS |
| AAATTTGTTCAAAATGTACA+CGG | 0.641865 | 3.3:+70755922 | MS.gene75658:CDS |
| AATATCCTTGCTATAGCACA+AGG | 0.642453 | 3.3:+70755019 | MS.gene75658:CDS |
| CATCAGCCTCTGATAGTCCG+TGG | 0.643633 | 3.3:+70757782 | MS.gene75658:CDS |
| TTTGAAGGTATTGAGATACG+TGG | 0.650454 | 3.3:+70757637 | MS.gene75658:intron |
| CGAGCTACGAAGATACAAGA+AGG | 0.652358 | 3.3:+70757694 | MS.gene75658:CDS |
| AGCCAATGCATTGAAAAGGG+TGG | 0.652774 | 3.3:-70754623 | None:intergenic |
| CTGCAAATGGATGGACACAA+GGG | 0.659166 | 3.3:+70753090 | MS.gene75658:CDS |
| ATAACAGGACTAATTGTGCG+TGG | 0.667475 | 3.3:-70753772 | None:intergenic |
| ACTATACACACCATCAACAT+CGG | 0.667842 | 3.3:-70753344 | None:intergenic |
| AAGATTCTATAAAGGCTCTG+CGG | 0.671564 | 3.3:+70755080 | MS.gene75658:CDS |
| AAAGTGGAGAGAAATTCGAG+AGG | 0.681138 | 3.3:+70755873 | MS.gene75658:CDS |
| TTATGACTCACAAACCACCA+TGG | 0.683309 | 3.3:+70755120 | MS.gene75658:CDS |
| GATGTATGATCTCATCCACA+AGG | 0.691167 | 3.3:+70751267 | MS.gene75658:CDS |
| GAAATTACCAAAATTTGACG+AGG | 0.695620 | 3.3:+70757478 | MS.gene75658:CDS |
| TATCGCGCCCATAATTGCTG+CGG | 0.698799 | 3.3:-70753293 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 70751247 | 70757889 | 70751247 | ID=MS.gene75658 |
| chr3.3 | mRNA | 70751247 | 70757889 | 70751247 | ID=MS.gene75658.t1;Parent=MS.gene75658 |
| chr3.3 | exon | 70751247 | 70751454 | 70751247 | ID=MS.gene75658.t1.exon1;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70751247 | 70751454 | 70751247 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70752823 | 70752911 | 70752823 | ID=MS.gene75658.t1.exon2;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70752823 | 70752911 | 70752823 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70753079 | 70753382 | 70753079 | ID=MS.gene75658.t1.exon3;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70753079 | 70753382 | 70753079 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70753603 | 70753655 | 70753603 | ID=MS.gene75658.t1.exon4;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70753603 | 70753655 | 70753603 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70753745 | 70753959 | 70753745 | ID=MS.gene75658.t1.exon5;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70753745 | 70753959 | 70753745 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70754098 | 70754185 | 70754098 | ID=MS.gene75658.t1.exon6;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70754098 | 70754185 | 70754098 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70754283 | 70754396 | 70754283 | ID=MS.gene75658.t1.exon7;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70754283 | 70754396 | 70754283 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70754550 | 70754648 | 70754550 | ID=MS.gene75658.t1.exon8;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70754550 | 70754648 | 70754550 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70755010 | 70755204 | 70755010 | ID=MS.gene75658.t1.exon9;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70755010 | 70755204 | 70755010 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70755393 | 70755475 | 70755393 | ID=MS.gene75658.t1.exon10;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70755393 | 70755475 | 70755393 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70755858 | 70756083 | 70755858 | ID=MS.gene75658.t1.exon11;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70755858 | 70756083 | 70755858 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70756395 | 70756540 | 70756395 | ID=MS.gene75658.t1.exon12;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70756395 | 70756540 | 70756395 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70756774 | 70756909 | 70756774 | ID=MS.gene75658.t1.exon13;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70756774 | 70756909 | 70756774 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70757278 | 70757361 | 70757278 | ID=MS.gene75658.t1.exon14;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70757278 | 70757361 | 70757278 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70757449 | 70757541 | 70757449 | ID=MS.gene75658.t1.exon15;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70757449 | 70757541 | 70757449 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| chr3.3 | exon | 70757644 | 70757889 | 70757644 | ID=MS.gene75658.t1.exon16;Parent=MS.gene75658.t1 |
| chr3.3 | CDS | 70757644 | 70757889 | 70757644 | ID=cds.MS.gene75658.t1;Parent=MS.gene75658.t1 |
| Gene Sequence |
| Protein sequence |
