Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75694.t1 | XP_024635521.1 | 82.8 | 395 | 66 | 2 | 1 | 393 | 1 | 395 | 7.00E-171 | 610.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75694.t1 | A0A396IUB9 | 82.8 | 395 | 66 | 2 | 1 | 393 | 1 | 395 | 5.1e-171 | 610.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056584 | MS.gene75694 | 0.801149 | 1.03E-48 | -1.69E-46 |
| MS.gene060619 | MS.gene75694 | 0.800246 | 1.58E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75694.t1 | AT3G23910 | 40.759 | 395 | 215 | 5 | 6 | 381 | 14 | 408 | 1.17e-86 | 269 |
| MS.gene75694.t1 | AT3G24255 | 38.257 | 413 | 229 | 7 | 6 | 392 | 14 | 426 | 1.08e-78 | 249 |
| MS.gene75694.t1 | AT3G24255 | 40.988 | 344 | 190 | 2 | 62 | 392 | 401 | 744 | 1.72e-72 | 241 |
| MS.gene75694.t1 | AT3G24255 | 40.988 | 344 | 190 | 2 | 62 | 392 | 483 | 826 | 1.38e-71 | 239 |
| MS.gene75694.t1 | AT3G23910 | 45.276 | 254 | 126 | 2 | 141 | 381 | 50 | 303 | 4.21e-71 | 226 |
| MS.gene75694.t1 | AT3G24255 | 43.019 | 265 | 138 | 2 | 141 | 392 | 50 | 314 | 2.32e-68 | 219 |
| MS.gene75694.t1 | AT3G24255 | 36.294 | 394 | 221 | 8 | 6 | 375 | 14 | 401 | 5.01e-65 | 213 |
Find 76 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGTTTGATTCTTCTTCT+TGG | 0.207084 | 3.3:-70406972 | None:intergenic |
| GCAATTGGAACTTGGGAATA+AGG | 0.235791 | 3.3:+70408276 | MS.gene75694:intron |
| CATGAATCTAGGCGAAAATT+TGG | 0.266114 | 3.3:+70408055 | MS.gene75694:CDS |
| TATGACGTTAAAGGATATTC+AGG | 0.272206 | 3.3:+70408625 | MS.gene75694:CDS |
| TCTCATGGTTGGCCAATATT+TGG | 0.273858 | 3.3:+70410372 | MS.gene75694:CDS |
| TGAATTGAATTACCGAAATC+TGG | 0.279388 | 3.3:-70407185 | None:intergenic |
| TCATACTCGGCAAAATATAC+TGG | 0.307505 | 3.3:+70411218 | MS.gene75694:CDS |
| TGAGACCATTGTAGCTCATT+TGG | 0.323304 | 3.3:+70410320 | MS.gene75694:CDS |
| CCTAGAGCTGGTGATGGTTC+TGG | 0.329079 | 3.3:+70411291 | MS.gene75694:CDS |
| TCTTTACAAAATCCAGATTT+CGG | 0.332313 | 3.3:+70407173 | MS.gene75694:CDS |
| AGATGCTTACATAGAGCATT+TGG | 0.354127 | 3.3:+70407273 | MS.gene75694:intron |
| TCATCCACGTATATATCATT+TGG | 0.371803 | 3.3:-70409929 | None:intergenic |
| CACATTCGTGGAGTAAATCT+TGG | 0.374860 | 3.3:-70407002 | None:intergenic |
| GGAGGGGACTATGACGTTAA+AGG | 0.382729 | 3.3:+70408616 | MS.gene75694:CDS |
| CAATCAATAACTCATGATTC+AGG | 0.388820 | 3.3:-70408586 | None:intergenic |
| TAGATATTCTCTTGAATACT+TGG | 0.402244 | 3.3:+70410290 | MS.gene75694:intron |
| ATTGTAGCTCATTTGGTTAG+AGG | 0.418807 | 3.3:+70410327 | MS.gene75694:CDS |
| TTCAACGGAGAACCAAATAT+TGG | 0.430959 | 3.3:-70410384 | None:intergenic |
| TTCAATCTCTTTAGCAACAT+TGG | 0.434634 | 3.3:-70407329 | None:intergenic |
| TGAGTTATTGATTGAAGTGT+TGG | 0.448149 | 3.3:+70408595 | MS.gene75694:CDS |
| ACTTAGGTGTCTTGTGGTAA+AGG | 0.448895 | 3.3:+70410160 | MS.gene75694:CDS |
| GGAGGCTAAACTTGAAGAGT+TGG | 0.457166 | 3.3:+70407488 | MS.gene75694:CDS |
| GTTGAAGCTAATATCAATCA+AGG | 0.459869 | 3.3:+70410401 | MS.gene75694:CDS |
| GCCCTCTACCGTTGGCATAT+AGG | 0.460761 | 3.3:-70408519 | None:intergenic |
| TTGACAGGTCTAAAAGTGAT+TGG | 0.465270 | 3.3:+70408461 | MS.gene75694:CDS |
| TTGATACTGCAAAGTCTGTC+AGG | 0.467306 | 3.3:+70409957 | MS.gene75694:CDS |
| GACCTATATGCCAACGGTAG+AGG | 0.482139 | 3.3:+70408517 | MS.gene75694:CDS |
| TTGATTGATATTAGCTTCAA+CGG | 0.489420 | 3.3:-70410399 | None:intergenic |
| TTACATAGAGCATTTGGAAA+AGG | 0.489688 | 3.3:+70407279 | MS.gene75694:CDS |
| GTAGACACCGACATGAATCT+AGG | 0.497575 | 3.3:+70408044 | MS.gene75694:CDS |
| GCTGGTGATGGTTCTGGCTA+AGG | 0.499598 | 3.3:+70411297 | MS.gene75694:CDS |
| GATAAATGCTGAGGCTAATG+AGG | 0.501176 | 3.3:+70408004 | MS.gene75694:CDS |
| TGAGGGAATTTCTTCAATGC+TGG | 0.506990 | 3.3:+70408022 | MS.gene75694:CDS |
| AATCTCTTTAGCAACATTGG+TGG | 0.513534 | 3.3:-70407326 | None:intergenic |
| TAAAGGATGCTAACAAATCA+AGG | 0.518759 | 3.3:+70410177 | MS.gene75694:CDS |
| ACATTCGTGGAGTAAATCTT+GGG | 0.522932 | 3.3:-70407001 | None:intergenic |
| TATTGATTGAAGTGTTGGAG+GGG | 0.531809 | 3.3:+70408600 | MS.gene75694:CDS |
| GTGTTGCAGCAATTGGAACT+TGG | 0.533115 | 3.3:+70408268 | MS.gene75694:intron |
| CAGATTGACAATGCATTGAC+AGG | 0.537752 | 3.3:+70408446 | MS.gene75694:CDS |
| GTTATTGATTGAAGTGTTGG+AGG | 0.538382 | 3.3:+70408598 | MS.gene75694:CDS |
| ACCTATATGCCAACGGTAGA+GGG | 0.544751 | 3.3:+70408518 | MS.gene75694:CDS |
| CATACTCGGCAAAATATACT+GGG | 0.547411 | 3.3:+70411219 | MS.gene75694:CDS |
| CCAGAACCATCACCAGCTCT+AGG | 0.554938 | 3.3:-70411291 | None:intergenic |
| TGGTATCTTCAACTCTCTGT+AGG | 0.555959 | 3.3:-70408550 | None:intergenic |
| TTCTTTGAATCATATTACAT+CGG | 0.556460 | 3.3:+70407515 | MS.gene75694:CDS |
| GAACATGAAGAGCACATTCG+TGG | 0.557107 | 3.3:-70407014 | None:intergenic |
| TTGCAGCTTGATCCTAGAGC+TGG | 0.565028 | 3.3:+70411279 | MS.gene75694:CDS |
| TTTGAATCATATTACATCGG+AGG | 0.568500 | 3.3:+70407518 | MS.gene75694:CDS |
| CATGAAATGCCCTCTACCGT+TGG | 0.570086 | 3.3:-70408527 | None:intergenic |
| ATTCAGGATAGATGCATCCA+TGG | 0.576247 | 3.3:-70408570 | None:intergenic |
| GAATCTAGGCGAAAATTTGG+AGG | 0.576882 | 3.3:+70408058 | MS.gene75694:CDS |
| GTAAATCTTGGGAATCTGAA+GGG | 0.577091 | 3.3:-70406990 | None:intergenic |
| ACATAAAGTTGTCTCATGGT+TGG | 0.580003 | 3.3:+70410361 | MS.gene75694:CDS |
| AGTATGAGTATCTAATGAGT+TGG | 0.582228 | 3.3:-70411202 | None:intergenic |
| AGTAAATCTTGGGAATCTGA+AGG | 0.582351 | 3.3:-70406991 | None:intergenic |
| TCTAACCAAATGAGCTACAA+TGG | 0.590969 | 3.3:-70410325 | None:intergenic |
| CAGAAGCAAGTGAACTCCGC+AGG | 0.591758 | 3.3:+70406834 | MS.gene75694:CDS |
| GAATTATACTAAGCACACTT+AGG | 0.592429 | 3.3:+70410144 | MS.gene75694:CDS |
| TGAAATGAAATCGATTCTGA+AGG | 0.592769 | 3.3:+70408303 | MS.gene75694:CDS |
| TTGTATTAACCATTGCAATG+AGG | 0.596339 | 3.3:-70410108 | None:intergenic |
| CTTGATCCTAGAGCTGGTGA+TGG | 0.596945 | 3.3:+70411285 | MS.gene75694:CDS |
| GAAATCGATTCTGAAGGCCA+TGG | 0.598854 | 3.3:+70408309 | MS.gene75694:CDS |
| TGTTGCAGCAATTGGAACTT+GGG | 0.607267 | 3.3:+70408269 | MS.gene75694:intron |
| TTGAAGCTAATATCAATCAA+GGG | 0.620980 | 3.3:+70410402 | MS.gene75694:CDS |
| GCAGCAAGTCCTCATTGCAA+TGG | 0.623103 | 3.3:+70410099 | MS.gene75694:intron |
| CTTACAATGAAAAGACTCCA+TGG | 0.625561 | 3.3:-70408326 | None:intergenic |
| ACAGAGAGTTGAAGATACCA+TGG | 0.630523 | 3.3:+70408553 | MS.gene75694:CDS |
| ATAAATGCTGAGGCTAATGA+GGG | 0.636629 | 3.3:+70408005 | MS.gene75694:CDS |
| TTATTGATTGAAGTGTTGGA+GGG | 0.637105 | 3.3:+70408599 | MS.gene75694:CDS |
| AAGCACACTTAGGTGTCTTG+TGG | 0.641823 | 3.3:+70410154 | MS.gene75694:CDS |
| CTCGCGAAAACTCGTAACGA+TGG | 0.646362 | 3.3:+70407355 | MS.gene75694:CDS |
| ACTCATTAGATACTCATACT+CGG | 0.649710 | 3.3:+70411205 | MS.gene75694:CDS |
| GCATACATAAAGTTGTCTCA+TGG | 0.652475 | 3.3:+70410357 | MS.gene75694:CDS |
| ATAGGAGCAGATAAATGCTG+AGG | 0.674029 | 3.3:+70407995 | MS.gene75694:intron |
| TTTGCAGACCTATATGCCAA+CGG | 0.681871 | 3.3:+70408511 | MS.gene75694:CDS |
| TCATTCTTAACAGAACACAG+TGG | 0.739164 | 3.3:+70407118 | MS.gene75694:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAAAATAAAATAAAT+GGG | + | chr3.3:70411046-70411065 | MS.gene75694:intron | 0.0% |
| !!! | TATTTTTAAAATAAAATAAA+TGG | + | chr3.3:70411045-70411064 | MS.gene75694:intron | 0.0% |
| !! | AAAAACATGTTAAATACTTA+GGG | + | chr3.3:70407757-70407776 | MS.gene75694:intron | 15.0% |
| !! | AAGAATTAAGAAAATTGATA+TGG | + | chr3.3:70407661-70407680 | MS.gene75694:intron | 15.0% |
| !! | ATAAATACTTATTGTTAACT+TGG | - | chr3.3:70407717-70407736 | None:intergenic | 15.0% |
| !! | ATTGAATAACAAAAACAAAA+CGG | - | chr3.3:70407219-70407238 | None:intergenic | 15.0% |
| !!! | GTTAACTTTAATTCTTTTAA+GGG | + | chr3.3:70411124-70411143 | MS.gene75694:intron | 15.0% |
| !!! | TAACTTAATGTTTTTATATG+TGG | - | chr3.3:70409824-70409843 | None:intergenic | 15.0% |
| !! | AAAACATGTTAAATACTTAG+GGG | + | chr3.3:70407758-70407777 | MS.gene75694:intron | 20.0% |
| !! | AGTATTTATATCATATCCAT+TGG | + | chr3.3:70407728-70407747 | MS.gene75694:intron | 20.0% |
| !! | ATTATAAATAATGCAGTGAT+TGG | + | chr3.3:70411148-70411167 | MS.gene75694:intron | 20.0% |
| !! | ATTCATTCTGATATTCTATT+TGG | + | chr3.3:70408956-70408975 | MS.gene75694:intron | 20.0% |
| !! | GAAAAACATGTTAAATACTT+AGG | + | chr3.3:70407756-70407775 | MS.gene75694:intron | 20.0% |
| !! | GAAAGGGTAATTATAATATT+AGG | + | chr3.3:70409642-70409661 | MS.gene75694:intron | 20.0% |
| !! | GGGTTTAATGTTATTAAATT+TGG | + | chr3.3:70410228-70410247 | MS.gene75694:intron | 20.0% |
| !! | TTCTTTGAATCATATTACAT+CGG | + | chr3.3:70407515-70407534 | MS.gene75694:CDS | 20.0% |
| !! | TTTGTTTCACATAATAACTA+TGG | + | chr3.3:70407400-70407419 | MS.gene75694:intron | 20.0% |
| !!! | CTTTTTTGGTTTTGTTATTT+AGG | + | chr3.3:70409901-70409920 | MS.gene75694:intron | 20.0% |
| !!! | GGTTAACTTTAATTCTTTTA+AGG | + | chr3.3:70411123-70411142 | MS.gene75694:intron | 20.0% |
| !!! | TCATTTCTTTTGATAATAAC+TGG | + | chr3.3:70410639-70410658 | MS.gene75694:intron | 20.0% |
| !!! | TCTTTTACAGAAAATCATTT+TGG | + | chr3.3:70408187-70408206 | MS.gene75694:intron | 20.0% |
| !!! | TGATGATTTGTTAACTTTTT+TGG | + | chr3.3:70409887-70409906 | MS.gene75694:intron | 20.0% |
| !!! | TTTTTCAGATTCTATTCTTT+TGG | + | chr3.3:70407467-70407486 | MS.gene75694:intron | 20.0% |
| ! | AAACAAGTCAAAGAATGAAA+CGG | - | chr3.3:70408666-70408685 | None:intergenic | 25.0% |
| ! | AACAGCAAAATATGATGTTA+AGG | - | chr3.3:70409594-70409613 | None:intergenic | 25.0% |
| ! | AATTTAAGTAAGACAGTTTG+AGG | - | chr3.3:70410581-70410600 | None:intergenic | 25.0% |
| ! | ATTATAATATTAGGTGACGA+AGG | + | chr3.3:70409651-70409670 | MS.gene75694:intron | 25.0% |
| ! | CATGTAGAAAACTTATGAAA+GGG | + | chr3.3:70409626-70409645 | MS.gene75694:intron | 25.0% |
| ! | GAATTTACTAAACCTAAACA+AGG | - | chr3.3:70410002-70410021 | None:intergenic | 25.0% |
| ! | GCTTAGTTCATAATGAATTT+GGG | - | chr3.3:70410035-70410054 | None:intergenic | 25.0% |
| ! | TAGATATTCTCTTGAATACT+TGG | + | chr3.3:70410290-70410309 | MS.gene75694:intron | 25.0% |
| ! | TCAGATAATCATCTATTCTA+TGG | + | chr3.3:70408381-70408400 | MS.gene75694:intron | 25.0% |
| ! | TCATGTAGAAAACTTATGAA+AGG | + | chr3.3:70409625-70409644 | MS.gene75694:intron | 25.0% |
| ! | TCTTTACAAAATCCAGATTT+CGG | + | chr3.3:70407173-70407192 | MS.gene75694:CDS | 25.0% |
| ! | TGCTTAGTTCATAATGAATT+TGG | - | chr3.3:70410036-70410055 | None:intergenic | 25.0% |
| ! | TTGAAGCTAATATCAATCAA+GGG | + | chr3.3:70410402-70410421 | MS.gene75694:CDS | 25.0% |
| ! | TTGTCAAATCTAATGAACAA+TGG | - | chr3.3:70408696-70408715 | None:intergenic | 25.0% |
| !! | CTTTTCATTGTAAGTTCAAA+TGG | + | chr3.3:70408335-70408354 | MS.gene75694:CDS | 25.0% |
| !! | GAATTAGTTTCAAACAAATG+TGG | + | chr3.3:70408137-70408156 | MS.gene75694:intron | 25.0% |
| !! | TTGATTGATATTAGCTTCAA+CGG | - | chr3.3:70410402-70410421 | None:intergenic | 25.0% |
| !! | TTTACAGAAAATCATTTTGG+TGG | + | chr3.3:70408190-70408209 | MS.gene75694:intron | 25.0% |
| !! | TTTTACGCATCATTACATAT+TGG | - | chr3.3:70409506-70409525 | None:intergenic | 25.0% |
| !! | TTTTCCAAATGATATATACG+TGG | + | chr3.3:70409925-70409944 | MS.gene75694:CDS | 25.0% |
| !!! | ATTTTTTATAGCCAACACAT+TGG | - | chr3.3:70410485-70410504 | None:intergenic | 25.0% |
| !!! | CAGTCGTTTTTGATAATTAT+AGG | + | chr3.3:70407977-70407996 | MS.gene75694:intron | 25.0% |
| !!! | TGCTTATTCTGCATTTTTTT+CGG | + | chr3.3:70409048-70409067 | MS.gene75694:intron | 25.0% |
| !!! | TTAAATACTTAGGGGTATTT+TGG | + | chr3.3:70407766-70407785 | MS.gene75694:intron | 25.0% |
| !!! | TTGATATGGTGTTATATGTT+CGG | + | chr3.3:70407675-70407694 | MS.gene75694:intron | 25.0% |
| AAAAGAAGCAGAAAATGTTC+AGG | - | chr3.3:70408173-70408192 | None:intergenic | 30.0% | |
| AAACCTAAACAAGGAGAAAA+AGG | - | chr3.3:70409993-70410012 | None:intergenic | 30.0% | |
| AAACTAACAGCAAAACATCA+AGG | - | chr3.3:70411016-70411035 | None:intergenic | 30.0% | |
| AACTAACAGCAAAACATCAA+GGG | - | chr3.3:70411015-70411034 | None:intergenic | 30.0% | |
| AATATACATAACTCATGCCA+GGG | - | chr3.3:70407890-70407909 | None:intergenic | 30.0% | |
| AATTACGTTTAGCAATGATG+TGG | + | chr3.3:70408714-70408733 | MS.gene75694:intron | 30.0% | |
| ACTCATTAGATACTCATACT+CGG | + | chr3.3:70411205-70411224 | MS.gene75694:CDS | 30.0% | |
| AGATCATGTCTCATATGTTT+CGG | + | chr3.3:70411101-70411120 | MS.gene75694:intron | 30.0% | |
| AGTATGAGTATCTAATGAGT+TGG | - | chr3.3:70411205-70411224 | None:intergenic | 30.0% | |
| AGTTATAGTGTTAGCCATTT+AGG | + | chr3.3:70408781-70408800 | MS.gene75694:intron | 30.0% | |
| ATGTAGTTGAAAATTTCTCG+AGG | + | chr3.3:70407803-70407822 | MS.gene75694:intron | 30.0% | |
| ATTCCATCTAGAAATGTTTG+GGG | - | chr3.3:70409571-70409590 | None:intergenic | 30.0% | |
| ATTCTTGTGATTTAGTCATC+TGG | - | chr3.3:70407647-70407666 | None:intergenic | 30.0% | |
| CAATCAATAACTCATGATTC+AGG | - | chr3.3:70408589-70408608 | None:intergenic | 30.0% | |
| GAATTATACTAAGCACACTT+AGG | + | chr3.3:70410144-70410163 | MS.gene75694:CDS | 30.0% | |
| GATTCCATCTAGAAATGTTT+GGG | - | chr3.3:70409572-70409591 | None:intergenic | 30.0% | |
| GTATTAATCACCTACAACAA+AGG | - | chr3.3:70409382-70409401 | None:intergenic | 30.0% | |
| GTCAAAACATGATTACTGAA+TGG | - | chr3.3:70407958-70407977 | None:intergenic | 30.0% | |
| GTGTTAAAAAAGTTCTCATG+TGG | + | chr3.3:70410542-70410561 | MS.gene75694:intron | 30.0% | |
| GTTCTATAGGGTAAAGTAAT+TGG | + | chr3.3:70410903-70410922 | MS.gene75694:intron | 30.0% | |
| GTTGAAGCTAATATCAATCA+AGG | + | chr3.3:70410401-70410420 | MS.gene75694:CDS | 30.0% | |
| TAAAAAACAGCATACAGACT+AGG | - | chr3.3:70410693-70410712 | None:intergenic | 30.0% | |
| TAAAGGATGCTAACAAATCA+AGG | + | chr3.3:70410177-70410196 | MS.gene75694:CDS | 30.0% | |
| TAGTTCATAATGAATTTGGG+AGG | - | chr3.3:70410032-70410051 | None:intergenic | 30.0% | |
| TATGACGTTAAAGGATATTC+AGG | + | chr3.3:70408625-70408644 | MS.gene75694:CDS | 30.0% | |
| TCATCCACGTATATATCATT+TGG | - | chr3.3:70409932-70409951 | None:intergenic | 30.0% | |
| TGAATTGAATTACCGAAATC+TGG | - | chr3.3:70407188-70407207 | None:intergenic | 30.0% | |
| TGATTTATGGTCTGTATTCT+AGG | + | chr3.3:70409136-70409155 | MS.gene75694:intron | 30.0% | |
| TGTAGTTGAAAATTTCTCGA+GGG | + | chr3.3:70407804-70407823 | MS.gene75694:intron | 30.0% | |
| TTACTATTACTAGAGTGACT+CGG | + | chr3.3:70410765-70410784 | MS.gene75694:intron | 30.0% | |
| TTCAATCTCTTTAGCAACAT+TGG | - | chr3.3:70407332-70407351 | None:intergenic | 30.0% | |
| TTCTTGTGATTTAGTCATCT+GGG | - | chr3.3:70407646-70407665 | None:intergenic | 30.0% | |
| TTGTATTAACCATTGCAATG+AGG | - | chr3.3:70410111-70410130 | None:intergenic | 30.0% | |
| TTTGAATCATATTACATCGG+AGG | + | chr3.3:70407518-70407537 | MS.gene75694:CDS | 30.0% | |
| ! | AATGTTTGGGGTAATGAAAT+TGG | - | chr3.3:70409559-70409578 | None:intergenic | 30.0% |
| ! | ACATGTTTTTCTGTAACCAA+TGG | - | chr3.3:70407747-70407766 | None:intergenic | 30.0% |
| ! | CTATCATATAGACACTTTTG+AGG | - | chr3.3:70410718-70410737 | None:intergenic | 30.0% |
| ! | TCTTTTAGACACGTGTAAAT+AGG | + | chr3.3:70410941-70410960 | MS.gene75694:intron | 30.0% |
| ! | TGAAATGAAATCGATTCTGA+AGG | + | chr3.3:70408303-70408322 | MS.gene75694:CDS | 30.0% |
| ! | TGAGTTATTGATTGAAGTGT+TGG | + | chr3.3:70408595-70408614 | MS.gene75694:CDS | 30.0% |
| ! | TTACATAGAGCATTTGGAAA+AGG | + | chr3.3:70407279-70407298 | MS.gene75694:CDS | 30.0% |
| ! | TTCAGATTCTATTCTTTTGG+AGG | + | chr3.3:70407470-70407489 | MS.gene75694:intron | 30.0% |
| !! | AATTTGCTGGATATATCATG+TGG | + | chr3.3:70409092-70409111 | MS.gene75694:intron | 30.0% |
| !! | AGTTTTAGTACCTTTGTTGT+AGG | + | chr3.3:70409369-70409388 | MS.gene75694:intron | 30.0% |
| !! | TCTCGAGGGTTTTATATATA+GGG | + | chr3.3:70407818-70407837 | MS.gene75694:intron | 30.0% |
| !! | TGCTTTGACTTTTCAGAATT+TGG | + | chr3.3:70411179-70411198 | MS.gene75694:intron | 30.0% |
| !! | TTATTGATTGAAGTGTTGGA+GGG | + | chr3.3:70408599-70408618 | MS.gene75694:CDS | 30.0% |
| !! | TTCTCGAGGGTTTTATATAT+AGG | + | chr3.3:70407817-70407836 | MS.gene75694:intron | 30.0% |
| !! | TTTCCTTTTTCTCCTTGTTT+AGG | + | chr3.3:70409987-70410006 | MS.gene75694:intron | 30.0% |
| !! | TTTCTTGTGGTATTTTGAAG+TGG | + | chr3.3:70408864-70408883 | MS.gene75694:intron | 30.0% |
| !!! | ACATGTTTTGAAGTCACATT+TGG | + | chr3.3:70410872-70410891 | MS.gene75694:intron | 30.0% |
| !!! | CTCAATTGCTTTTAGTTTGA+TGG | + | chr3.3:70408929-70408948 | MS.gene75694:intron | 30.0% |
| !!! | GCTTATTCTGCATTTTTTTC+GGG | + | chr3.3:70409049-70409068 | MS.gene75694:intron | 30.0% |
| AAAAGCCTTTCACAGTTCAT+AGG | - | chr3.3:70408813-70408832 | None:intergenic | 35.0% | |
| AAAATACCAAAATACCCCCA+TGG | - | chr3.3:70409282-70409301 | None:intergenic | 35.0% | |
| AAACTACTCCACAATTTCAG+TGG | - | chr3.3:70410615-70410634 | None:intergenic | 35.0% | |
| AAATGATCCTTCTACCAAAC+TGG | - | chr3.3:70409535-70409554 | None:intergenic | 35.0% | |
| AACATTAAACCCAAACCGAA+AGG | - | chr3.3:70410220-70410239 | None:intergenic | 35.0% | |
| AAGGGTTTGATTCTTCTTCT+TGG | - | chr3.3:70406975-70406994 | None:intergenic | 35.0% | |
| AAGTGAGAGAGTAACGAAAA+CGG | - | chr3.3:70406886-70406905 | None:intergenic | 35.0% | |
| AATCTCTTTAGCAACATTGG+TGG | - | chr3.3:70407329-70407348 | None:intergenic | 35.0% | |
| AATGATCCTTCTACCAAACT+GGG | - | chr3.3:70409534-70409553 | None:intergenic | 35.0% | |
| ACATAAAGTTGTCTCATGGT+TGG | + | chr3.3:70410361-70410380 | MS.gene75694:CDS | 35.0% | |
| ACATTCGTGGAGTAAATCTT+GGG | - | chr3.3:70407004-70407023 | None:intergenic | 35.0% | |
| ACGCATCATTACATATTGGA+TGG | - | chr3.3:70409502-70409521 | None:intergenic | 35.0% | |
| ACTAACAGCAAAACATCAAG+GGG | - | chr3.3:70411014-70411033 | None:intergenic | 35.0% | |
| AGGTTTGGAGAATGTGATAA+CGG | - | chr3.3:70406915-70406934 | None:intergenic | 35.0% | |
| AGTAAATCTTGGGAATCTGA+AGG | - | chr3.3:70406994-70407013 | None:intergenic | 35.0% | |
| ATAAATGCTGAGGCTAATGA+GGG | + | chr3.3:70408005-70408024 | MS.gene75694:CDS | 35.0% | |
| ATAATGAATTTGGGAGGAGA+GGG | - | chr3.3:70410026-70410045 | None:intergenic | 35.0% | |
| ATAGTGTTAGCCATTTAGGT+AGG | + | chr3.3:70408785-70408804 | MS.gene75694:intron | 35.0% | |
| ATATCATGTGGTTACATCAG+TGG | + | chr3.3:70409104-70409123 | MS.gene75694:intron | 35.0% | |
| ATCTGTGAAATTCGACTGAA+AGG | - | chr3.3:70406940-70406959 | None:intergenic | 35.0% | |
| ATTGTAGCTCATTTGGTTAG+AGG | + | chr3.3:70410327-70410346 | MS.gene75694:CDS | 35.0% | |
| CAATATACATAACTCATGCC+AGG | - | chr3.3:70407891-70407910 | None:intergenic | 35.0% | |
| CAATTGCTGCAACACATAAA+AGG | - | chr3.3:70408263-70408282 | None:intergenic | 35.0% | |
| CATACTCGGCAAAATATACT+GGG | + | chr3.3:70411219-70411238 | MS.gene75694:CDS | 35.0% | |
| CATGAATCTAGGCGAAAATT+TGG | + | chr3.3:70408055-70408074 | MS.gene75694:CDS | 35.0% | |
| CGCATCATTACATATTGGAT+GGG | - | chr3.3:70409501-70409520 | None:intergenic | 35.0% | |
| CTAAAGGAAGAGATTAGGAA+CGG | - | chr3.3:70409750-70409769 | None:intergenic | 35.0% | |
| CTTACAATGAAAAGACTCCA+TGG | - | chr3.3:70408329-70408348 | None:intergenic | 35.0% | |
| GAAAATTGAAGAATGTGCGT+AGG | - | chr3.3:70407046-70407065 | None:intergenic | 35.0% | |
| GATCATGTCTCATATGTTTC+GGG | + | chr3.3:70411102-70411121 | MS.gene75694:intron | 35.0% | |
| GCATACATAAAGTTGTCTCA+TGG | + | chr3.3:70410357-70410376 | MS.gene75694:CDS | 35.0% | |
| GGATTCCATCTAGAAATGTT+TGG | - | chr3.3:70409573-70409592 | None:intergenic | 35.0% | |
| GTAAATCTTGGGAATCTGAA+GGG | - | chr3.3:70406993-70407012 | None:intergenic | 35.0% | |
| TAATGTAGTCCTTTCGGTTT+GGG | + | chr3.3:70410208-70410227 | MS.gene75694:intron | 35.0% | |
| TACTATTACTAGAGTGACTC+GGG | + | chr3.3:70410766-70410785 | MS.gene75694:intron | 35.0% | |
| TATCATGTGGTTACATCAGT+GGG | + | chr3.3:70409105-70409124 | MS.gene75694:intron | 35.0% | |
| TATGCCTATGCTCATTATGA+TGG | + | chr3.3:70407856-70407875 | MS.gene75694:intron | 35.0% | |
| TCATACTCGGCAAAATATAC+TGG | + | chr3.3:70411218-70411237 | MS.gene75694:CDS | 35.0% | |
| TCATTCTTAACAGAACACAG+TGG | + | chr3.3:70407118-70407137 | MS.gene75694:intron | 35.0% | |
| TCTAACCAAATGAGCTACAA+TGG | - | chr3.3:70410328-70410347 | None:intergenic | 35.0% | |
| TGAAATTCGACTGAAAGGAA+AGG | - | chr3.3:70406935-70406954 | None:intergenic | 35.0% | |
| TGACTGTAATGTAGTCCTTT+CGG | + | chr3.3:70410202-70410221 | MS.gene75694:intron | 35.0% | |
| TGGGAGTGAGGATAATTTAA+AGG | + | chr3.3:70410847-70410866 | MS.gene75694:intron | 35.0% | |
| TGTGCTGTACTTGTAGAATT+TGG | + | chr3.3:70409413-70409432 | MS.gene75694:intron | 35.0% | |
| TTAGACACGTGTAAATAGGT+AGG | + | chr3.3:70410945-70410964 | MS.gene75694:intron | 35.0% | |
| TTATTCTTCCTTGTGCTGTA+CGG | + | chr3.3:70410513-70410532 | MS.gene75694:intron | 35.0% | |
| TTCAACGGAGAACCAAATAT+TGG | - | chr3.3:70410387-70410406 | None:intergenic | 35.0% | |
| TTGACAGGTCTAAAAGTGAT+TGG | + | chr3.3:70408461-70408480 | MS.gene75694:CDS | 35.0% | |
| ! | AGATGCTTACATAGAGCATT+TGG | + | chr3.3:70407273-70407292 | MS.gene75694:intron | 35.0% |
| ! | ATTTTCGCCTAGATTCATGT+CGG | - | chr3.3:70408054-70408073 | None:intergenic | 35.0% |
| ! | CTAAAGCATCAAACCTGAAA+GGG | - | chr3.3:70408424-70408443 | None:intergenic | 35.0% |
| ! | CTTTTATGTGTTGCAGCAAT+TGG | + | chr3.3:70408261-70408280 | MS.gene75694:intron | 35.0% |
| ! | CTTTTTCCTGACAGATTTGA+TGG | - | chr3.3:70408757-70408776 | None:intergenic | 35.0% |
| ! | TAAAGCATCAAACCTGAAAG+GGG | - | chr3.3:70408423-70408442 | None:intergenic | 35.0% |
| ! | TCTAAAGCATCAAACCTGAA+AGG | - | chr3.3:70408425-70408444 | None:intergenic | 35.0% |
| ! | TTACCCCAAACATTTCTAGA+TGG | + | chr3.3:70409565-70409584 | MS.gene75694:intron | 35.0% |
| !! | GAGGGTTTTATATATAGGGA+AGG | + | chr3.3:70407822-70407841 | MS.gene75694:intron | 35.0% |
| !! | GTTATTGATTGAAGTGTTGG+AGG | + | chr3.3:70408598-70408617 | MS.gene75694:CDS | 35.0% |
| !! | TATTGATTGAAGTGTTGGAG+GGG | + | chr3.3:70408600-70408619 | MS.gene75694:CDS | 35.0% |
| !! | TGCTTTGAAGTTGTTTCTTG+TGG | + | chr3.3:70408851-70408870 | MS.gene75694:intron | 35.0% |
| !! | TGTTGATTCCACTGAAATTG+TGG | + | chr3.3:70410604-70410623 | MS.gene75694:intron | 35.0% |
| !!! | ATTCTGCATTTTTTTCGGGA+TGG | + | chr3.3:70409053-70409072 | MS.gene75694:intron | 35.0% |
| !!! | GGGGTATTTTGGTATATATG+CGG | - | chr3.3:70409201-70409220 | None:intergenic | 35.0% |
| !!! | GTGGGTTTGCTTTTGATTTA+TGG | + | chr3.3:70409123-70409142 | MS.gene75694:intron | 35.0% |
| !!! | TTCTGCATTTTTTTCGGGAT+GGG | + | chr3.3:70409054-70409073 | MS.gene75694:intron | 35.0% |
| AAAGATCCCAGTTTGGTAGA+AGG | + | chr3.3:70409525-70409544 | MS.gene75694:intron | 40.0% | |
| ACAGAGAGTTGAAGATACCA+TGG | + | chr3.3:70408553-70408572 | MS.gene75694:CDS | 40.0% | |
| ACTTAGGTGTCTTGTGGTAA+AGG | + | chr3.3:70410160-70410179 | MS.gene75694:CDS | 40.0% | |
| AGACCTTGACCAATAAAGTC+AGG | + | chr3.3:70408906-70408925 | MS.gene75694:intron | 40.0% | |
| AGAGTAACGAAAACGGAGAA+AGG | - | chr3.3:70406879-70406898 | None:intergenic | 40.0% | |
| ATAGGAGCAGATAAATGCTG+AGG | + | chr3.3:70407995-70408014 | MS.gene75694:intron | 40.0% | |
| ATATACCAAAATACCCCCAG+CGG | + | chr3.3:70409204-70409223 | MS.gene75694:intron | 40.0% | |
| ATCCATCCCTTTGTCTAATG+AGG | + | chr3.3:70407919-70407938 | MS.gene75694:intron | 40.0% | |
| ATTCAACAACCTCCTCCTAA+AGG | - | chr3.3:70409766-70409785 | None:intergenic | 40.0% | |
| ATTCAGGATAGATGCATCCA+TGG | - | chr3.3:70408573-70408592 | None:intergenic | 40.0% | |
| CACATTCGTGGAGTAAATCT+TGG | - | chr3.3:70407005-70407024 | None:intergenic | 40.0% | |
| CATAATGAATTTGGGAGGAG+AGG | - | chr3.3:70410027-70410046 | None:intergenic | 40.0% | |
| CGCTACAGATACATGTATGT+AGG | - | chr3.3:70411081-70411100 | None:intergenic | 40.0% | |
| CGTTCCTAATCTCTTCCTTT+AGG | + | chr3.3:70409748-70409767 | MS.gene75694:intron | 40.0% | |
| GAATCTAGGCGAAAATTTGG+AGG | + | chr3.3:70408058-70408077 | MS.gene75694:CDS | 40.0% | |
| GATAAATGCTGAGGCTAATG+AGG | + | chr3.3:70408004-70408023 | MS.gene75694:CDS | 40.0% | |
| GCAATTGAGCCTGACTTTAT+TGG | - | chr3.3:70408918-70408937 | None:intergenic | 40.0% | |
| GCAATTGGAACTTGGGAATA+AGG | + | chr3.3:70408276-70408295 | MS.gene75694:intron | 40.0% | |
| GCGTAAAAAAGATCCCAGTT+TGG | + | chr3.3:70409518-70409537 | MS.gene75694:intron | 40.0% | |
| GGTTCCATCATAATGAGCAT+AGG | - | chr3.3:70407863-70407882 | None:intergenic | 40.0% | |
| GTAATGTAGTCCTTTCGGTT+TGG | + | chr3.3:70410207-70410226 | MS.gene75694:intron | 40.0% | |
| GTGAGACAATTCCAATGTGT+TGG | + | chr3.3:70410471-70410490 | MS.gene75694:intron | 40.0% | |
| GTGTGAATCTCAGAATTTGC+TGG | + | chr3.3:70409079-70409098 | MS.gene75694:intron | 40.0% | |
| TACGAACCATCAAATCTGTC+AGG | + | chr3.3:70408748-70408767 | MS.gene75694:intron | 40.0% | |
| TCACCATAAGACATGCTAAC+TGG | - | chr3.3:70410989-70411008 | None:intergenic | 40.0% | |
| TCCATCCCTTTGTCTAATGA+GGG | + | chr3.3:70407920-70407939 | MS.gene75694:intron | 40.0% | |
| TCCTAATCTCTTCCTTTAGG+AGG | + | chr3.3:70409751-70409770 | MS.gene75694:intron | 40.0% | |
| TCCTCCTAAAGGAAGAGATT+AGG | - | chr3.3:70409755-70409774 | None:intergenic | 40.0% | |
| TGAGACCATTGTAGCTCATT+TGG | + | chr3.3:70410320-70410339 | MS.gene75694:CDS | 40.0% | |
| TGAGGGAATTTCTTCAATGC+TGG | + | chr3.3:70408022-70408041 | MS.gene75694:CDS | 40.0% | |
| TGGTATCTTCAACTCTCTGT+AGG | - | chr3.3:70408553-70408572 | None:intergenic | 40.0% | |
| TGTTGCAGCAATTGGAACTT+GGG | + | chr3.3:70408269-70408288 | MS.gene75694:intron | 40.0% | |
| TTCATAGGAGCCTACCTAAA+TGG | - | chr3.3:70408798-70408817 | None:intergenic | 40.0% | |
| TTCGACTGAAAGGAAAGGTT+TGG | - | chr3.3:70406930-70406949 | None:intergenic | 40.0% | |
| TTGATACTGCAAAGTCTGTC+AGG | + | chr3.3:70409957-70409976 | MS.gene75694:CDS | 40.0% | |
| TTGGTGCATGGTGTTCTATA+GGG | + | chr3.3:70410891-70410910 | MS.gene75694:intron | 40.0% | |
| TTTGCAGACCTATATGCCAA+CGG | + | chr3.3:70408511-70408530 | MS.gene75694:CDS | 40.0% | |
| ! | AAAGCATCAAACCTGAAAGG+GGG | - | chr3.3:70408422-70408441 | None:intergenic | 40.0% |
| ! | AAGTTTTCTCTGCGAAGTAG+AGG | + | chr3.3:70410449-70410468 | MS.gene75694:CDS | 40.0% |
| ! | CAGATTGACAATGCATTGAC+AGG | + | chr3.3:70408446-70408465 | MS.gene75694:CDS | 40.0% |
| ! | GACAGTTTGAGGTGAAAACT+AGG | - | chr3.3:70410570-70410589 | None:intergenic | 40.0% |
| ! | TAATCTCTTCCTTTAGGAGG+AGG | + | chr3.3:70409754-70409773 | MS.gene75694:intron | 40.0% |
| ! | TCTCATGGTTGGCCAATATT+TGG | + | chr3.3:70410372-70410391 | MS.gene75694:CDS | 40.0% |
| ! | TTGGTATTTTCGTGACGTGT+GGG | + | chr3.3:70409292-70409311 | MS.gene75694:intron | 40.0% |
| ! | TTTGGTATTTTCGTGACGTG+TGG | + | chr3.3:70409291-70409310 | MS.gene75694:intron | 40.0% |
| ! | TTTGGTGCATGGTGTTCTAT+AGG | + | chr3.3:70410890-70410909 | MS.gene75694:intron | 40.0% |
| !! | TTGAAGTCACATTTGGTGCA+TGG | + | chr3.3:70410879-70410898 | MS.gene75694:intron | 40.0% |
| !!! | GCGTTGGCTGTTATTCTTTT+CGG | + | chr3.3:70408110-70408129 | MS.gene75694:intron | 40.0% |
| !!! | TCTGCATTTTTTTCGGGATG+GGG | + | chr3.3:70409055-70409074 | MS.gene75694:intron | 40.0% |
| AAACGGAGAAAGGAGAAGGA+AGG | - | chr3.3:70406869-70406888 | None:intergenic | 45.0% | |
| AAGCACACTTAGGTGTCTTG+TGG | + | chr3.3:70410154-70410173 | MS.gene75694:CDS | 45.0% | |
| ACCTATATGCCAACGGTAGA+GGG | + | chr3.3:70408518-70408537 | MS.gene75694:CDS | 45.0% | |
| ACGAAAACGGAGAAAGGAGA+AGG | - | chr3.3:70406873-70406892 | None:intergenic | 45.0% | |
| AGGCTCCTATGAACTGTGAA+AGG | + | chr3.3:70408805-70408824 | MS.gene75694:intron | 45.0% | |
| CAGCCAGTTAGCATGTCTTA+TGG | + | chr3.3:70410983-70411002 | MS.gene75694:intron | 45.0% | |
| CCATCCCTTTGTCTAATGAG+GGG | + | chr3.3:70407921-70407940 | MS.gene75694:intron | 45.0% | |
| CCTTCCCCTCATTAGACAAA+GGG | - | chr3.3:70407928-70407947 | None:intergenic | 45.0% | |
| CCTTTGTCTAATGAGGGGAA+GGG | + | chr3.3:70407926-70407945 | MS.gene75694:intron | 45.0% | |
| CTTTGTCTAATGAGGGGAAG+GGG | + | chr3.3:70407927-70407946 | MS.gene75694:intron | 45.0% | |
| GAGCCTGACTTTATTGGTCA+AGG | - | chr3.3:70408912-70408931 | None:intergenic | 45.0% | |
| GAGGAGGTTGTTGAATGCTT+TGG | + | chr3.3:70409770-70409789 | MS.gene75694:intron | 45.0% | |
| GGAGGCTAAACTTGAAGAGT+TGG | + | chr3.3:70407488-70407507 | MS.gene75694:CDS | 45.0% | |
| GTAGACACCGACATGAATCT+AGG | + | chr3.3:70408044-70408063 | MS.gene75694:CDS | 45.0% | |
| GTGTTGCAGCAATTGGAACT+TGG | + | chr3.3:70408268-70408287 | MS.gene75694:intron | 45.0% | |
| TAACGCTTCACATGTGATCC+TGG | + | chr3.3:70409697-70409716 | MS.gene75694:intron | 45.0% | |
| ! | ATTACTAGAGTGACTCGGGT+TGG | + | chr3.3:70410770-70410789 | MS.gene75694:intron | 45.0% |
| ! | GAAATCGATTCTGAAGGCCA+TGG | + | chr3.3:70408309-70408328 | MS.gene75694:CDS | 45.0% |
| ! | GAACATGAAGAGCACATTCG+TGG | - | chr3.3:70407017-70407036 | None:intergenic | 45.0% |
| ! | TACATATTGTGGTGGGAGTG+AGG | + | chr3.3:70410835-70410854 | MS.gene75694:intron | 45.0% |
| ! | TGCTCATTATGATGGAACCC+TGG | + | chr3.3:70407864-70407883 | MS.gene75694:intron | 45.0% |
| ! | TTACTAGAGTGACTCGGGTT+GGG | + | chr3.3:70410771-70410790 | MS.gene75694:intron | 45.0% |
| !! | AGGAAGGAAGAAAGTACCTG+CGG | - | chr3.3:70406853-70406872 | None:intergenic | 45.0% |
| !!! | CTGCATTTTTTTCGGGATGG+GGG | + | chr3.3:70409056-70409075 | MS.gene75694:intron | 45.0% |
| !!! | TAACTGCCATGGGGGTATTT+TGG | + | chr3.3:70409273-70409292 | MS.gene75694:intron | 45.0% |
| !!! | TGCATTTTTTTCGGGATGGG+GGG | + | chr3.3:70409057-70409076 | MS.gene75694:intron | 45.0% |
| AAATGATGTTGGGGAGCGAG+CGG | - | chr3.3:70409240-70409259 | None:intergenic | 50.0% | |
| AACGGCAGTTAACTGCCATG+GGG | + | chr3.3:70409264-70409283 | MS.gene75694:intron | 50.0% | |
| ACATCCATCCGTACAGCACA+AGG | - | chr3.3:70410524-70410543 | None:intergenic | 50.0% | |
| CAGCATACAGACTAGGACGT+TGG | - | chr3.3:70410686-70410705 | None:intergenic | 50.0% | |
| CATGAAATGCCCTCTACCGT+TGG | - | chr3.3:70408530-70408549 | None:intergenic | 50.0% | |
| CATGGCAGTTAACTGCCGTT+CGG | - | chr3.3:70409264-70409283 | None:intergenic | 50.0% | |
| CCCCAACATCATTTGCCGAA+CGG | + | chr3.3:70409246-70409265 | MS.gene75694:intron | 50.0% | |
| CCCCTCATTAGACAAAGGGA+TGG | - | chr3.3:70407924-70407943 | None:intergenic | 50.0% | |
| CCCTTCCCCTCATTAGACAA+AGG | - | chr3.3:70407929-70407948 | None:intergenic | 50.0% | |
| CCCTTTGTCTAATGAGGGGA+AGG | + | chr3.3:70407925-70407944 | MS.gene75694:intron | 50.0% | |
| CCGTTCGGCAAATGATGTTG+GGG | - | chr3.3:70409249-70409268 | None:intergenic | 50.0% | |
| CTCATCTTGTTCCCCCTTTC+AGG | + | chr3.3:70408408-70408427 | MS.gene75694:intron | 50.0% | |
| CTCGCGAAAACTCGTAACGA+TGG | + | chr3.3:70407355-70407374 | MS.gene75694:CDS | 50.0% | |
| CTTGATCCTAGAGCTGGTGA+TGG | + | chr3.3:70411285-70411304 | MS.gene75694:CDS | 50.0% | |
| GAACGGCAGTTAACTGCCAT+GGG | + | chr3.3:70409263-70409282 | MS.gene75694:intron | 50.0% | |
| GACCTATATGCCAACGGTAG+AGG | + | chr3.3:70408517-70408536 | MS.gene75694:CDS | 50.0% | |
| GATGACTACGCCACACTACT+TGG | + | chr3.3:70408088-70408107 | MS.gene75694:intron | 50.0% | |
| GCAGCAAGTCCTCATTGCAA+TGG | + | chr3.3:70410099-70410118 | MS.gene75694:intron | 50.0% | |
| GCCGTTCGGCAAATGATGTT+GGG | - | chr3.3:70409250-70409269 | None:intergenic | 50.0% | |
| GGAGGGGACTATGACGTTAA+AGG | + | chr3.3:70408616-70408635 | MS.gene75694:CDS | 50.0% | |
| TCTTCCTTGTGCTGTACGGA+TGG | + | chr3.3:70410517-70410536 | MS.gene75694:intron | 50.0% | |
| TGCCGTTCGGCAAATGATGT+TGG | - | chr3.3:70409251-70409270 | None:intergenic | 50.0% | |
| TTGCAGCTTGATCCTAGAGC+TGG | + | chr3.3:70411279-70411298 | MS.gene75694:CDS | 50.0% | |
| ! | ATGTGTTGCTGTGCTTTGCC+AGG | - | chr3.3:70409718-70409737 | None:intergenic | 50.0% |
| ! | GTGACGTGTGGGAGCATAAA+TGG | + | chr3.3:70409303-70409322 | MS.gene75694:intron | 50.0% |
| ! | TACAGACTAGGACGTTGGCT+TGG | - | chr3.3:70410681-70410700 | None:intergenic | 50.0% |
| !! | TGCAATGAGGACTTGCTGCA+TGG | - | chr3.3:70410098-70410117 | None:intergenic | 50.0% |
| ACAGCCAACGCCAAGTAGTG+TGG | - | chr3.3:70408101-70408120 | None:intergenic | 55.0% | |
| ACATAACTCATGCCAGGGCC+AGG | - | chr3.3:70407885-70407904 | None:intergenic | 55.0% | |
| ACGGCAGTTAACTGCCATGG+GGG | + | chr3.3:70409265-70409284 | MS.gene75694:intron | 55.0% | |
| CAGAAGCAAGTGAACTCCGC+AGG | + | chr3.3:70406834-70406853 | MS.gene75694:CDS | 55.0% | |
| CATAACTCATGCCAGGGCCA+GGG | - | chr3.3:70407884-70407903 | None:intergenic | 55.0% | |
| CCAGAACCATCACCAGCTCT+AGG | - | chr3.3:70411294-70411313 | None:intergenic | 55.0% | |
| CGAACGGCAGTTAACTGCCA+TGG | + | chr3.3:70409262-70409281 | MS.gene75694:intron | 55.0% | |
| GCCCTCTACCGTTGGCATAT+AGG | - | chr3.3:70408522-70408541 | None:intergenic | 55.0% | |
| TACGCCACACTACTTGGCGT+TGG | + | chr3.3:70408094-70408113 | MS.gene75694:intron | 55.0% | |
| ! | TTATGATGGAACCCTGGCCC+TGG | + | chr3.3:70407870-70407889 | MS.gene75694:intron | 55.0% |
| !! | CCTAGAGCTGGTGATGGTTC+TGG | + | chr3.3:70411291-70411310 | MS.gene75694:CDS | 55.0% |
| !!! | AACTGCCGCTGGGGGTATTT+TGG | - | chr3.3:70409212-70409231 | None:intergenic | 55.0% |
| AGCGGCAGTTAACTGCCGCT+GGG | - | chr3.3:70409241-70409222 | None:intergenic | 60.0% | |
| CGGCAGTTAACTGCCGCTGG+GGG | - | chr3.3:70409220-70409239 | None:intergenic | 65.0% | |
| GAGCGGCAGTTAACTGCCGC+TGG | - | chr3.3:70409223-70409242 | None:intergenic | 65.0% | |
| GCGGCAGTTAACTGCCGCTG+GGG | - | chr3.3:70409221-70409240 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 70406830 | 70411317 | 70406830 | ID=MS.gene75694 |
| chr3.3 | mRNA | 70406830 | 70411317 | 70406830 | ID=MS.gene75694.t1;Parent=MS.gene75694 |
| chr3.3 | exon | 70406830 | 70406855 | 70406830 | ID=MS.gene75694.t1.exon1;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70406830 | 70406855 | 70406830 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70406945 | 70407038 | 70406945 | ID=MS.gene75694.t1.exon2;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70406945 | 70407038 | 70406945 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70407131 | 70407194 | 70407131 | ID=MS.gene75694.t1.exon3;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70407131 | 70407194 | 70407131 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70407275 | 70407376 | 70407275 | ID=MS.gene75694.t1.exon4;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70407275 | 70407376 | 70407275 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70407475 | 70407539 | 70407475 | ID=MS.gene75694.t1.exon5;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70407475 | 70407539 | 70407475 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70407999 | 70408079 | 70407999 | ID=MS.gene75694.t1.exon6;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70407999 | 70408079 | 70407999 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70408277 | 70408356 | 70408277 | ID=MS.gene75694.t1.exon7;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70408277 | 70408356 | 70408277 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70408430 | 70408646 | 70408430 | ID=MS.gene75694.t1.exon8;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70408430 | 70408646 | 70408430 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70409923 | 70409978 | 70409923 | ID=MS.gene75694.t1.exon9;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70409923 | 70409978 | 70409923 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70410103 | 70410198 | 70410103 | ID=MS.gene75694.t1.exon10;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70410103 | 70410198 | 70410103 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70410293 | 70410470 | 70410293 | ID=MS.gene75694.t1.exon11;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70410293 | 70410470 | 70410293 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| chr3.3 | exon | 70411195 | 70411317 | 70411195 | ID=MS.gene75694.t1.exon12;Parent=MS.gene75694.t1 |
| chr3.3 | CDS | 70411195 | 70411317 | 70411195 | ID=cds.MS.gene75694.t1;Parent=MS.gene75694.t1 |
| Gene Sequence |
| Protein sequence |
