Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76139.t1 | XP_003597604.1 | 98.8 | 594 | 5 | 1 | 1 | 592 | 1 | 594 | 0.00E+00 | 1196.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76139.t1 | Q9S746 | 67.4 | 562 | 181 | 1 | 33 | 592 | 33 | 594 | 2.7e-223 | 776.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76139.t1 | G7IUI3 | 98.8 | 594 | 5 | 1 | 1 | 592 | 1 | 594 | 0.0e+00 | 1196.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051939 | MS.gene76139 | 0.960415 | 1.57E-118 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene76139 | MS.gene98150 | PPI |
MS.gene76139 | MS.gene34288 | PPI |
MS.gene76139 | MS.gene034273 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76139.t1 | MTR_2g100070 | 98.822 | 594 | 5 | 1 | 1 | 592 | 1 | 594 | 0.0 | 1214 |
MS.gene76139.t1 | MTR_8g016320 | 78.583 | 593 | 119 | 3 | 1 | 592 | 1 | 586 | 0.0 | 942 |
MS.gene76139.t1 | MTR_5g011010 | 54.741 | 559 | 237 | 5 | 32 | 586 | 28 | 574 | 0.0 | 618 |
MS.gene76139.t1 | MTR_5g011020 | 55.556 | 531 | 229 | 3 | 61 | 587 | 13 | 540 | 0.0 | 616 |
MS.gene76139.t1 | MTR_1g101770 | 51.237 | 566 | 255 | 9 | 31 | 588 | 22 | 574 | 0.0 | 557 |
MS.gene76139.t1 | MTR_4g005860 | 43.826 | 575 | 256 | 13 | 44 | 588 | 25 | 562 | 5.17e-144 | 429 |
MS.gene76139.t1 | MTR_5g041340 | 41.959 | 541 | 235 | 12 | 61 | 585 | 54 | 531 | 4.98e-130 | 392 |
MS.gene76139.t1 | MTR_1g101760 | 42.553 | 470 | 191 | 11 | 36 | 481 | 30 | 444 | 9.99e-108 | 332 |
MS.gene76139.t1 | MTR_5g024110 | 53.333 | 90 | 29 | 2 | 163 | 252 | 2 | 78 | 1.36e-19 | 85.5 |
MS.gene76139.t1 | MTR_5g082740 | 86.842 | 38 | 5 | 0 | 219 | 256 | 13 | 50 | 1.21e-14 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76139.t1 | AT1G72970 | 67.951 | 571 | 179 | 2 | 26 | 592 | 24 | 594 | 0.0 | 797 |
MS.gene76139.t1 | AT1G72970 | 65.149 | 571 | 168 | 3 | 26 | 592 | 24 | 567 | 0.0 | 750 |
MS.gene76139.t1 | AT1G12570 | 50.680 | 588 | 263 | 10 | 8 | 588 | 4 | 571 | 0.0 | 561 |
MS.gene76139.t1 | AT3G56060 | 52.542 | 531 | 241 | 6 | 61 | 587 | 46 | 569 | 0.0 | 550 |
MS.gene76139.t1 | AT5G51950 | 52.264 | 530 | 247 | 5 | 61 | 585 | 13 | 541 | 0.0 | 541 |
MS.gene76139.t1 | AT5G51950 | 52.264 | 530 | 247 | 5 | 61 | 585 | 46 | 574 | 0.0 | 541 |
MS.gene76139.t1 | AT5G51950 | 51.880 | 532 | 248 | 5 | 61 | 585 | 46 | 576 | 0.0 | 539 |
MS.gene76139.t1 | AT5G51930 | 50.471 | 531 | 252 | 7 | 58 | 585 | 23 | 545 | 2.21e-178 | 516 |
MS.gene76139.t1 | AT5G51930 | 50.000 | 520 | 251 | 5 | 58 | 575 | 70 | 582 | 2.81e-172 | 501 |
MS.gene76139.t1 | AT1G73050 | 45.161 | 558 | 249 | 9 | 39 | 586 | 41 | 551 | 1.83e-158 | 465 |
MS.gene76139.t1 | AT1G14190 | 40.214 | 562 | 258 | 9 | 30 | 585 | 15 | 504 | 7.55e-132 | 396 |
MS.gene76139.t1 | AT1G14185 | 40.608 | 559 | 257 | 9 | 30 | 584 | 15 | 502 | 1.02e-131 | 395 |
MS.gene76139.t1 | AT1G14190 | 41.431 | 531 | 242 | 8 | 61 | 585 | 16 | 483 | 1.73e-131 | 394 |
Find 132 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCAATAGAAGCATTTA+AGG | 0.141320 | 2.3:+3683907 | MS.gene76139:CDS |
GTTCTTCACAAAAGCTTTAA+TGG | 0.147195 | 2.3:-3683876 | None:intergenic |
TTCAATATACACACCCTTAT+TGG | 0.165452 | 2.3:-3683453 | None:intergenic |
CATTGACATGCTTTGGTATA+AGG | 0.224426 | 2.3:-3684180 | None:intergenic |
GCTGCTGAATTGCTTTCTTC+TGG | 0.241479 | 2.3:+3682828 | MS.gene76139:CDS |
CACATTGGCAGAGAGCATTT+AGG | 0.246895 | 2.3:+3682694 | MS.gene76139:CDS |
CAATGCAAGAGCAAGGGTTT+TGG | 0.248852 | 2.3:+3679620 | MS.gene76139:CDS |
TGCTCTGTCTCCTTATGATT+TGG | 0.266265 | 2.3:+3678702 | MS.gene76139:CDS |
AACAGTTGGTATTACCAATA+AGG | 0.278893 | 2.3:+3683439 | MS.gene76139:CDS |
CCTCCCTTAAATGCTTCTAT+TGG | 0.293503 | 2.3:-3683911 | None:intergenic |
AGTGTAGAAGCCAGCATTAA+TGG | 0.295634 | 2.3:-3679655 | None:intergenic |
ATTGAAGCTAGCTGTGGATT+TGG | 0.295640 | 2.3:+3683470 | MS.gene76139:CDS |
AAGTTCTCAAGTTCTGCTTT+TGG | 0.300973 | 2.3:-3683305 | None:intergenic |
GATTCTGCTGATCTTTGTTT+AGG | 0.307561 | 2.3:-3683854 | None:intergenic |
ATCAAAACAGTGAGTTTGTT+AGG | 0.318415 | 2.3:-3682855 | None:intergenic |
ACATTGGCAGAGAGCATTTA+GGG | 0.321681 | 2.3:+3682695 | MS.gene76139:CDS |
TGCTTTACTGATTTCTTAAG+AGG | 0.328962 | 2.3:-3683404 | None:intergenic |
GAGACACTGTGATCACTATT+TGG | 0.343081 | 2.3:+3684230 | MS.gene76139:CDS |
GGTTCCATACTTGTGTTCAT+AGG | 0.349711 | 2.3:-3682760 | None:intergenic |
GACTCGGATCATAAAGTTCT+TGG | 0.364592 | 2.3:+3684289 | MS.gene76139:CDS |
ATGCTATTACTCAGTGGAAT+TGG | 0.371120 | 2.3:+3683281 | MS.gene76139:CDS |
CATCTGTTGACAAGAAGAAC+TGG | 0.375984 | 2.3:-3679590 | None:intergenic |
TTCACCTATGAACACAAGTA+TGG | 0.378717 | 2.3:+3682756 | MS.gene76139:CDS |
AAACAGCATAAGGCAGTTCT+AGG | 0.388468 | 2.3:+3683203 | MS.gene76139:CDS |
TCATAGGTGAATCCATTAAA+AGG | 0.390473 | 2.3:-3682744 | None:intergenic |
CCACTGAGTAATAGCATTTG+AGG | 0.393909 | 2.3:-3683275 | None:intergenic |
GATAGGTTGGGAAAATTTGC+TGG | 0.396213 | 2.3:+3684652 | MS.gene76139:CDS |
GTAGCTTGAGGATTTGTTCC+CGG | 0.411082 | 2.3:-3684358 | None:intergenic |
AACAGACTTCGTGTCATAGA+TGG | 0.412322 | 2.3:+3684316 | MS.gene76139:CDS |
ATGCAGATTTATACAGAAGA+TGG | 0.419435 | 2.3:+3682599 | MS.gene76139:intron |
TTGTCAAGAAATGACACGTT+GGG | 0.423904 | 2.3:-3679525 | None:intergenic |
TCTGTATCATTGACATGCTT+TGG | 0.425751 | 2.3:-3684187 | None:intergenic |
CTGCTGATCTTTGTTTAGGT+GGG | 0.428567 | 2.3:-3683850 | None:intergenic |
CAGTTCTTCTTGTCAACAGA+TGG | 0.431045 | 2.3:+3679591 | MS.gene76139:CDS |
GTGAGAGGGTTGCAGCTAAA+GGG | 0.437545 | 2.3:-3679452 | None:intergenic |
TCAACCACCAACACAAATGA+TGG | 0.441542 | 2.3:+3679390 | MS.gene76139:CDS |
GTTGCTAATCCATGGTCAAC+AGG | 0.441747 | 2.3:+3683950 | MS.gene76139:CDS |
ATAGTAGGTGGTGGAACAGC+AGG | 0.446887 | 2.3:+3679426 | MS.gene76139:CDS |
GTGTTGGTGGTTGAAATTGA+TGG | 0.447390 | 2.3:-3679381 | None:intergenic |
ACAGTTGGTATTACCAATAA+GGG | 0.447697 | 2.3:+3683440 | MS.gene76139:CDS |
TCAAGCTACTGTCATGATGA+TGG | 0.452531 | 2.3:+3684372 | MS.gene76139:CDS |
TCTGCTGATCTTTGTTTAGG+TGG | 0.454698 | 2.3:-3683851 | None:intergenic |
TGTGAGAGGGTTGCAGCTAA+AGG | 0.455120 | 2.3:-3679453 | None:intergenic |
GGTAAAGAAAACTTGAACAA+TGG | 0.457717 | 2.3:+3679312 | MS.gene76139:intron |
TGACAACTTTCACATTACTT+TGG | 0.458359 | 2.3:+3679542 | MS.gene76139:CDS |
ATTCCAATAGAAGCATTTAA+GGG | 0.470834 | 2.3:+3683908 | MS.gene76139:CDS |
AGGCAGTTCTAGGAAATGAT+AGG | 0.474963 | 2.3:+3683213 | MS.gene76139:CDS |
AGTAAATAAGTCATATCCTT+GGG | 0.478136 | 2.3:+3682638 | MS.gene76139:CDS |
AGGGATGGTCTTCTAGATGC+TGG | 0.480965 | 2.3:+3682714 | MS.gene76139:CDS |
GTACTTGACAACAGATTTGT+TGG | 0.494001 | 2.3:+3683341 | MS.gene76139:CDS |
AGTTGATGAGCCAAATCATA+AGG | 0.496559 | 2.3:-3678712 | None:intergenic |
ATTGTGTCAAGTGGGGCAAT+TGG | 0.499811 | 2.3:+3683248 | MS.gene76139:CDS |
TACCCACCAATGGCAACTCT+TGG | 0.501174 | 2.3:+3678665 | None:intergenic |
TTATGTTTGTCACAGGTACA+TGG | 0.501548 | 2.3:+3684612 | MS.gene76139:intron |
ATCGCTGCGTCGAAGGAATC+CGG | 0.501787 | 2.3:+3684053 | MS.gene76139:CDS |
TAGTAAATAAGTCATATCCT+TGG | 0.503267 | 2.3:+3682637 | MS.gene76139:CDS |
ATCAACATTTACCGAGTCAC+CGG | 0.505634 | 2.3:+3684339 | MS.gene76139:CDS |
GGTGGTAGCTCCATTAATGC+TGG | 0.506443 | 2.3:+3679645 | MS.gene76139:CDS |
TGCAGATTTATACAGAAGAT+GGG | 0.507531 | 2.3:+3682600 | MS.gene76139:intron |
GGTTATGACTACATAATAGT+AGG | 0.510054 | 2.3:+3679411 | MS.gene76139:CDS |
ATAACCATCATTTGTGTTGG+TGG | 0.513715 | 2.3:-3679394 | None:intergenic |
GATTTGTGAAGTGCTGTGAC+TGG | 0.516712 | 2.3:-3684093 | None:intergenic |
CACAAGTATGGAACCAAAGT+TGG | 0.516898 | 2.3:+3682768 | MS.gene76139:CDS |
GGACAACCTTTGTTGCTAGC+CGG | 0.517443 | 2.3:-3684072 | None:intergenic |
CAGATTTGTTGGGAAGGGTA+TGG | 0.517824 | 2.3:+3683352 | MS.gene76139:CDS |
TATCATGGTGGATGCCATGT+AGG | 0.522694 | 2.3:+3684256 | MS.gene76139:CDS |
AGTCGATAACCTTCCCTACA+TGG | 0.525541 | 2.3:-3684270 | None:intergenic |
CTACTGTCATGATGATGGGC+AGG | 0.529408 | 2.3:+3684377 | MS.gene76139:CDS |
AGGATTTGTTCCCGGTGACT+CGG | 0.530848 | 2.3:-3684350 | None:intergenic |
TACTTGACAACAGATTTGTT+GGG | 0.535918 | 2.3:+3683342 | MS.gene76139:CDS |
AAGTAGTTGAAGGTAACAGC+AGG | 0.537737 | 2.3:-3684010 | None:intergenic |
GTGGCAATGAATGCTGTCAT+TGG | 0.538568 | 2.3:-3683498 | None:intergenic |
ACGCAGCGATGAAGATCGTA+AGG | 0.539351 | 2.3:-3684040 | None:intergenic |
CTCTGCCAATGTGAAAATGT+TGG | 0.540710 | 2.3:-3682684 | None:intergenic |
GTCATAACCATCATTTGTGT+TGG | 0.542012 | 2.3:-3679397 | None:intergenic |
TATCAAAAGTTGCTAATCCA+TGG | 0.543518 | 2.3:+3683942 | MS.gene76139:CDS |
ATCACTATTTGGCACTATCA+TGG | 0.546307 | 2.3:+3684241 | MS.gene76139:CDS |
GACACGTTGGGGTTTGTGAA+AGG | 0.549470 | 2.3:-3679513 | None:intergenic |
GATCTTCATCGCTGCGTCGA+AGG | 0.550234 | 2.3:+3684046 | MS.gene76139:CDS |
TGAAAATGGGAAACAGCATA+AGG | 0.550629 | 2.3:+3683193 | MS.gene76139:CDS |
GACAACAGATTTGTTGGGAA+GGG | 0.552928 | 2.3:+3683347 | MS.gene76139:CDS |
AACTTTCTACCTCTATGCCA+AGG | 0.552991 | 2.3:+3678731 | MS.gene76139:CDS |
AAGAACTGGGAAGCTGAAGT+TGG | 0.557686 | 2.3:-3679576 | None:intergenic |
ACAGCACCAAGAGTTGCCAT+TGG | 0.562132 | 2.3:-3678671 | None:intergenic |
ATCATGGTGGATGCCATGTA+GGG | 0.568185 | 2.3:+3684257 | MS.gene76139:CDS |
CAAGCTACTGTCATGATGAT+GGG | 0.573993 | 2.3:+3684373 | MS.gene76139:CDS |
TTGAGATCACCTGTTGACCA+TGG | 0.575270 | 2.3:-3683959 | None:intergenic |
CAAATTGATCAACACAAATG+TGG | 0.578618 | 2.3:+3683979 | MS.gene76139:CDS |
AGGGTGACTGAAGTAGTTGA+AGG | 0.579828 | 2.3:-3684020 | None:intergenic |
AAGTATGGAACCAAAGTTGG+TGG | 0.580293 | 2.3:+3682771 | MS.gene76139:CDS |
GCAATTCAGCAGCAGTGTGG+CGG | 0.582400 | 2.3:-3682818 | None:intergenic |
GAGTGTTCAATGCAAGAGCA+AGG | 0.585709 | 2.3:+3679613 | MS.gene76139:CDS |
TATGTTTGTCACAGGTACAT+GGG | 0.587204 | 2.3:+3684613 | MS.gene76139:intron |
AAATCATAAGGAGACAGAGC+AGG | 0.590185 | 2.3:-3678700 | None:intergenic |
AGGAATCCGGCTAGCAACAA+AGG | 0.590625 | 2.3:+3684066 | MS.gene76139:CDS |
TGGTGGATGCCATGTAGGGA+AGG | 0.592129 | 2.3:+3684261 | MS.gene76139:CDS |
TGACAACAGATTTGTTGGGA+AGG | 0.592779 | 2.3:+3683346 | MS.gene76139:CDS |
ATCTGTTGACAAGAAGAACT+GGG | 0.595621 | 2.3:-3679589 | None:intergenic |
CCAATAGAAGCATTTAAGGG+AGG | 0.598350 | 2.3:+3683911 | MS.gene76139:CDS |
AATCTGTTGTCAAGTACCAC+AGG | 0.598504 | 2.3:-3683335 | None:intergenic |
GACTACATAATAGTAGGTGG+TGG | 0.599865 | 2.3:+3679417 | MS.gene76139:CDS |
ACAATCTGCTTCTCAACCCA+AGG | 0.603701 | 2.3:-3682654 | None:intergenic |
TCAACATTTACCGAGTCACC+GGG | 0.607026 | 2.3:+3684340 | MS.gene76139:CDS |
GACAGCATTCATTGCCACCA+TGG | 0.608776 | 2.3:+3683503 | MS.gene76139:CDS |
ACTTCTTAACAACACTGTGA+AGG | 0.609234 | 2.3:+3684147 | MS.gene76139:CDS |
TGGCAGAGAGCATTTAGGGA+TGG | 0.615113 | 2.3:+3682699 | MS.gene76139:CDS |
TTGGTGGTTGAAATTGATGG+TGG | 0.617956 | 2.3:-3679378 | None:intergenic |
TGTAGGGAAGGTTATCGACT+CGG | 0.620475 | 2.3:+3684273 | MS.gene76139:CDS |
GATTTATACAGAAGATGGGG+TGG | 0.620759 | 2.3:+3682604 | MS.gene76139:intron |
GTGAAGTGATTGTGTCAAGT+GGG | 0.620954 | 2.3:+3683240 | MS.gene76139:CDS |
CCATGGTTTGCTATCAGCCG+AGG | 0.629601 | 2.3:+3683520 | MS.gene76139:CDS |
AGTGTTCAATGCAAGAGCAA+GGG | 0.630159 | 2.3:+3679614 | MS.gene76139:CDS |
ATTTATACAGAAGATGGGGT+GGG | 0.632566 | 2.3:+3682605 | MS.gene76139:CDS |
GTTGTCAAGAAATGACACGT+TGG | 0.632826 | 2.3:-3679526 | None:intergenic |
AGTGAAGTGATTGTGTCAAG+TGG | 0.646209 | 2.3:+3683239 | MS.gene76139:CDS |
TGTCAAGAAATGACACGTTG+GGG | 0.647046 | 2.3:-3679524 | None:intergenic |
TCTACACTAGAGCAAGCTCA+AGG | 0.648240 | 2.3:+3679670 | MS.gene76139:CDS |
TGAGAACTTGAAAATTCCTG+TGG | 0.649200 | 2.3:+3683319 | MS.gene76139:CDS |
ATCATCATGACAGTAGCTTG+AGG | 0.652028 | 2.3:-3684370 | None:intergenic |
GCAGATTTATACAGAAGATG+GGG | 0.659451 | 2.3:+3682601 | MS.gene76139:intron |
GTGTATATTGAAGCTAGCTG+TGG | 0.660070 | 2.3:+3683464 | MS.gene76139:CDS |
CAGTCACTGATAGAAACAGT+TGG | 0.661222 | 2.3:+3683425 | MS.gene76139:CDS |
TATGACTACATAATAGTAGG+TGG | 0.663102 | 2.3:+3679414 | MS.gene76139:CDS |
TAGTAGGTGGTGGAACAGCA+GGG | 0.663123 | 2.3:+3679427 | MS.gene76139:CDS |
ACTATTTGGCACTATCATGG+TGG | 0.670254 | 2.3:+3684244 | MS.gene76139:CDS |
CCTCAAATGCTATTACTCAG+TGG | 0.670452 | 2.3:+3683275 | MS.gene76139:CDS |
AGTAGTTGAAGGTAACAGCA+GGG | 0.692407 | 2.3:-3684009 | None:intergenic |
CGCAGCGATGAAGATCGTAA+GGG | 0.700423 | 2.3:-3684039 | None:intergenic |
CCTCGGCTGATAGCAAACCA+TGG | 0.712163 | 2.3:-3683520 | None:intergenic |
AAAGCAATTCAGCAGCAGTG+TGG | 0.721120 | 2.3:-3682821 | None:intergenic |
CGGCTGATAGCAAACCATGG+TGG | 0.727282 | 2.3:-3683517 | None:intergenic |
TGAAGTGATTGTGTCAAGTG+GGG | 0.736876 | 2.3:+3683241 | MS.gene76139:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACATTATTATTTATTTACA+AGG | - | chr2.3:3684567-3684586 | None:intergenic | 10.0% |
!! | GAAAAAAATATTATACATAA+TGG | + | chr2.3:3679089-3679108 | MS.gene76139:intron | 10.0% |
!!! | AAAAAAATAAGTCTAAAATT+TGG | + | chr2.3:3680467-3680486 | MS.gene76139:intron | 10.0% |
!!! | AAAAAATAAGTCTAAAATTT+GGG | + | chr2.3:3680468-3680487 | MS.gene76139:intron | 10.0% |
!!! | AATTTTAGACTTATTTTTTT+AGG | - | chr2.3:3680467-3680486 | None:intergenic | 10.0% |
!!! | TTAACTATTTTTTTACTTAA+TGG | - | chr2.3:3680518-3680537 | None:intergenic | 10.0% |
!!! | TTTTTTTTTAAGTAGTTTAT+TGG | - | chr2.3:3679859-3679878 | None:intergenic | 10.0% |
!! | AATAAGTACAATTTATAATG+CGG | - | chr2.3:3683053-3683072 | None:intergenic | 15.0% |
!! | ATATAACATATCTTAGAATT+TGG | + | chr2.3:3682926-3682945 | MS.gene76139:intron | 15.0% |
!! | ATCATAGATATAGATATTTA+AGG | - | chr2.3:3681040-3681059 | None:intergenic | 15.0% |
!! | GTATCATTAATATTATCATT+GGG | + | chr2.3:3680160-3680179 | MS.gene76139:intron | 15.0% |
!! | TCAATGTTTAATTATATGTT+AGG | - | chr2.3:3681765-3681784 | None:intergenic | 15.0% |
!! | TCATAGATATAGATATTTAA+GGG | - | chr2.3:3681039-3681058 | None:intergenic | 15.0% |
!!! | AAAATATTATAAAGTACTTG+GGG | - | chr2.3:3682355-3682374 | None:intergenic | 15.0% |
!!! | AATTATATGTTAGGTTTTTT+TGG | - | chr2.3:3681756-3681775 | None:intergenic | 15.0% |
!!! | ACAATATGAATTTTTCAATT+TGG | + | chr2.3:3682158-3682177 | MS.gene76139:intron | 15.0% |
!!! | AGAAAATATTATAAAGTACT+TGG | - | chr2.3:3682357-3682376 | None:intergenic | 15.0% |
!!! | ATAAAATATGTTCTAGTTAT+GGG | - | chr2.3:3681629-3681648 | None:intergenic | 15.0% |
!!! | ATATCGATTTAAAATTTGAT+AGG | - | chr2.3:3681385-3681404 | None:intergenic | 15.0% |
!!! | ATTATATGTTAGGTTTTTTT+GGG | - | chr2.3:3681755-3681774 | None:intergenic | 15.0% |
!!! | GAAAATATTATAAAGTACTT+GGG | - | chr2.3:3682356-3682375 | None:intergenic | 15.0% |
!!! | TATCGATTTAAAATTTGATA+GGG | - | chr2.3:3681384-3681403 | None:intergenic | 15.0% |
!!! | TTAGAAATTAAAAACTTGTT+AGG | + | chr2.3:3681191-3681210 | MS.gene76139:intron | 15.0% |
!!! | TTCTCTTTTTAAAAAAATTG+AGG | + | chr2.3:3679058-3679077 | MS.gene76139:intron | 15.0% |
!!! | TTGTATCAAAAACAATTTTT+TGG | - | chr2.3:3682893-3682912 | None:intergenic | 15.0% |
!! | AATACATCAAATATAGTTAG+AGG | - | chr2.3:3678769-3678788 | None:intergenic | 20.0% |
!! | AATATATTTATGTTTGTCAC+AGG | + | chr2.3:3684605-3684624 | MS.gene76139:intron | 20.0% |
!! | ATACATCAAATATAGTTAGA+GGG | - | chr2.3:3678768-3678787 | None:intergenic | 20.0% |
!! | ATATATTATTAGCATGTCAA+AGG | - | chr2.3:3684592-3684611 | None:intergenic | 20.0% |
!! | ATGAATGTAACAAAATAGAA+AGG | + | chr2.3:3680618-3680637 | MS.gene76139:intron | 20.0% |
!! | CAACATTATACGATAAAATA+AGG | - | chr2.3:3680762-3680781 | None:intergenic | 20.0% |
!! | CCCAAAATATATATAATTAG+GGG | + | chr2.3:3680491-3680510 | MS.gene76139:intron | 20.0% |
!! | CGTATCATTAATATTATCAT+TGG | + | chr2.3:3680159-3680178 | MS.gene76139:intron | 20.0% |
!! | GAAACATAACTAAAATCTAA+TGG | - | chr2.3:3681906-3681925 | None:intergenic | 20.0% |
!! | GCCCAAAATATATATAATTA+GGG | + | chr2.3:3680490-3680509 | MS.gene76139:intron | 20.0% |
!! | TAATTTAGGAAAAAGCTTAA+TGG | + | chr2.3:3681819-3681838 | MS.gene76139:intron | 20.0% |
!! | TATATGGAAAACAAATGTTA+TGG | - | chr2.3:3682577-3682596 | None:intergenic | 20.0% |
!! | TTGTTTACCAAAACAAAAAT+AGG | - | chr2.3:3679227-3679246 | None:intergenic | 20.0% |
!!! | AAAATTGTTTTTGATACAAC+AGG | + | chr2.3:3682894-3682913 | MS.gene76139:CDS | 20.0% |
!!! | AAGACCTTTTTTTTTTACAA+TGG | - | chr2.3:3682136-3682155 | None:intergenic | 20.0% |
!!! | AATAATGTTTTAGAAAGTTG+AGG | - | chr2.3:3682185-3682204 | None:intergenic | 20.0% |
!!! | ACCCCTAATTATATATATTT+TGG | - | chr2.3:3680495-3680514 | None:intergenic | 20.0% |
!!! | CCCCTAATTATATATATTTT+GGG | - | chr2.3:3680494-3680513 | None:intergenic | 20.0% |
!!! | GATAAAATATGTTCTAGTTA+TGG | - | chr2.3:3681630-3681649 | None:intergenic | 20.0% |
!!! | GTATAAATCTGCATTTTATA+TGG | - | chr2.3:3682593-3682612 | None:intergenic | 20.0% |
!!! | TAATTTTCAAGGATGAAAAT+GGG | + | chr2.3:3683180-3683199 | MS.gene76139:CDS | 20.0% |
!!! | TTAAAAGCATCTTACAAAAT+CGG | - | chr2.3:3682299-3682318 | None:intergenic | 20.0% |
! | AATTTCGACAACAAATTAGA+CGG | + | chr2.3:3683569-3683588 | MS.gene76139:intron | 25.0% |
! | AGATATAGATATTTAAGGGA+GGG | - | chr2.3:3681035-3681054 | None:intergenic | 25.0% |
! | AGTAAATAAGTCATATCCTT+GGG | + | chr2.3:3682638-3682657 | MS.gene76139:CDS | 25.0% |
! | ATCACTAAATTTAACTCGAA+CGG | + | chr2.3:3679818-3679837 | MS.gene76139:intron | 25.0% |
! | ATCTATGTCTCACATTATTA+AGG | + | chr2.3:3678793-3678812 | MS.gene76139:intron | 25.0% |
! | ATGTGTATGTCAACTAAAAA+AGG | + | chr2.3:3679028-3679047 | MS.gene76139:intron | 25.0% |
! | CATACATTCAAACATACTTA+AGG | + | chr2.3:3681337-3681356 | MS.gene76139:intron | 25.0% |
! | CCACTATAATGTCTTAATTT+AGG | + | chr2.3:3681805-3681824 | MS.gene76139:intron | 25.0% |
! | CCTAAATTAAGACATTATAG+TGG | - | chr2.3:3681808-3681827 | None:intergenic | 25.0% |
! | CTTAAAAGAAAGAAGAGAAA+GGG | + | chr2.3:3680675-3680694 | MS.gene76139:intron | 25.0% |
! | GACTCCATTGTAAAAAAAAA+AGG | + | chr2.3:3682129-3682148 | MS.gene76139:intron | 25.0% |
! | GGCCCAAAATATATATAATT+AGG | + | chr2.3:3680489-3680508 | MS.gene76139:intron | 25.0% |
! | GTTAACATAGTTCAAATATG+CGG | + | chr2.3:3683591-3683610 | MS.gene76139:intron | 25.0% |
! | TACATCAAATATAGTTAGAG+GGG | - | chr2.3:3678767-3678786 | None:intergenic | 25.0% |
! | TAGATATAGATATTTAAGGG+AGG | - | chr2.3:3681036-3681055 | None:intergenic | 25.0% |
! | TAGTAAATAAGTCATATCCT+TGG | + | chr2.3:3682637-3682656 | MS.gene76139:CDS | 25.0% |
! | TCAAAAATACCTCAATTTCT+AGG | - | chr2.3:3681063-3681082 | None:intergenic | 25.0% |
! | TCTTAAAAGAAAGAAGAGAA+AGG | + | chr2.3:3680674-3680693 | MS.gene76139:intron | 25.0% |
!! | AACATCTTCATTGTCATTTA+TGG | - | chr2.3:3680968-3680987 | None:intergenic | 25.0% |
!! | ACATCTTCATTGTCATTTAT+GGG | - | chr2.3:3680967-3680986 | None:intergenic | 25.0% |
!! | ATTGTTGTTGTTCCAAATTA+GGG | - | chr2.3:3680600-3680619 | None:intergenic | 25.0% |
!!! | AAAAACAATTTTTTGGACAG+TGG | - | chr2.3:3682886-3682905 | None:intergenic | 25.0% |
!!! | AAAGTGTTTCTATTTTTGGT+CGG | + | chr2.3:3680195-3680214 | MS.gene76139:intron | 25.0% |
!!! | AACTTGCTTTTCTTATGAAA+GGG | - | chr2.3:3679347-3679366 | None:intergenic | 25.0% |
!!! | AAGATTTTAAGAGATAGGTT+GGG | + | chr2.3:3684640-3684659 | MS.gene76139:CDS | 25.0% |
!!! | ATTCCAATAGAAGCATTTAA+GGG | + | chr2.3:3683908-3683927 | MS.gene76139:CDS | 25.0% |
!!! | CTCATTTCCTATTTTTGTTT+TGG | + | chr2.3:3679217-3679236 | MS.gene76139:intron | 25.0% |
!!! | GTAATTTTCAAGGATGAAAA+TGG | + | chr2.3:3683179-3683198 | MS.gene76139:CDS | 25.0% |
!!! | GTTGAAAGTGTTTCTATTTT+TGG | + | chr2.3:3680191-3680210 | MS.gene76139:intron | 25.0% |
!!! | TAAAAGCATCTTACAAAATC+GGG | - | chr2.3:3682298-3682317 | None:intergenic | 25.0% |
!!! | TGAAAGCATCCTATAAATTA+AGG | - | chr2.3:3682019-3682038 | None:intergenic | 25.0% |
!!! | TGTTTGATGATGTTTCTAAT+AGG | + | chr2.3:3680299-3680318 | MS.gene76139:intron | 25.0% |
!!! | TTAGGAGTACTTATTTGTTA+GGG | + | chr2.3:3681209-3681228 | MS.gene76139:intron | 25.0% |
!!! | TTATTGTGACGTTTTGTTTT+TGG | + | chr2.3:3680108-3680127 | MS.gene76139:intron | 25.0% |
!!! | TTTTGGGTGGTTATATATTT+AGG | - | chr2.3:3681739-3681758 | None:intergenic | 25.0% |
AAGCCCTAAGTTAAACAAAT+GGG | - | chr2.3:3681530-3681549 | None:intergenic | 30.0% | |
AATTCTAGTGGCTTATATTG+TGG | - | chr2.3:3682052-3682071 | None:intergenic | 30.0% | |
ACATCAAATATAGTTAGAGG+GGG | - | chr2.3:3678766-3678785 | None:intergenic | 30.0% | |
AGGAGTTTAAATCCCTAATT+TGG | + | chr2.3:3680585-3680604 | MS.gene76139:intron | 30.0% | |
AGTACTCTTTGAATAATGGT+GGG | + | chr2.3:3680884-3680903 | MS.gene76139:intron | 30.0% | |
ATACATGTTGCACAAATCTT+TGG | + | chr2.3:3678887-3678906 | MS.gene76139:intron | 30.0% | |
ATCTATGATCCTAGAAATTG+AGG | + | chr2.3:3681051-3681070 | MS.gene76139:intron | 30.0% | |
ATGAGCAACAAAATCACAAA+AGG | + | chr2.3:3680825-3680844 | MS.gene76139:intron | 30.0% | |
ATGCAGATTTATACAGAAGA+TGG | + | chr2.3:3682599-3682618 | MS.gene76139:intron | 30.0% | |
ATTACTTCCACGACATAAAT+TGG | - | chr2.3:3681483-3681502 | None:intergenic | 30.0% | |
ATTCTAGTGGCTTATATTGT+GGG | - | chr2.3:3682051-3682070 | None:intergenic | 30.0% | |
CAAATTGATCAACACAAATG+TGG | + | chr2.3:3683979-3683998 | MS.gene76139:CDS | 30.0% | |
CCAAATTATATGTTTGCTCT+AGG | + | chr2.3:3681233-3681252 | MS.gene76139:intron | 30.0% | |
CCTAGAGCAAACATATAATT+TGG | - | chr2.3:3681236-3681255 | None:intergenic | 30.0% | |
GCAGTCATAAATAAAAGGTA+AGG | - | chr2.3:3681409-3681428 | None:intergenic | 30.0% | |
GCAGTTCATGCATTTAAAAA+TGG | + | chr2.3:3683083-3683102 | MS.gene76139:intron | 30.0% | |
GGAACAAAAATTGTGTTCAT+TGG | - | chr2.3:3683386-3683405 | None:intergenic | 30.0% | |
GGGTCTAGAAAAAAAATGTT+AGG | + | chr2.3:3680220-3680239 | MS.gene76139:intron | 30.0% | |
GGTAAAGAAAACTTGAACAA+TGG | + | chr2.3:3679312-3679331 | MS.gene76139:intron | 30.0% | |
GGTTATGACTACATAATAGT+AGG | + | chr2.3:3679411-3679430 | MS.gene76139:CDS | 30.0% | |
GTAATGCTAAATATTGTTGC+AGG | + | chr2.3:3683134-3683153 | MS.gene76139:intron | 30.0% | |
GTATTACTAAATGTCGTTGA+TGG | + | chr2.3:3682228-3682247 | MS.gene76139:intron | 30.0% | |
TAACTACAAGATTTGATTGC+AGG | + | chr2.3:3679291-3679310 | MS.gene76139:intron | 30.0% | |
TAAGCCCTAAGTTAAACAAA+TGG | - | chr2.3:3681531-3681550 | None:intergenic | 30.0% | |
TAGACGCAGTCATAAATAAA+AGG | - | chr2.3:3681414-3681433 | None:intergenic | 30.0% | |
TATCAAAAGTTGCTAATCCA+TGG | + | chr2.3:3683942-3683961 | MS.gene76139:CDS | 30.0% | |
TATCACGTGATGTTACTAAA+AGG | + | chr2.3:3680565-3680584 | MS.gene76139:intron | 30.0% | |
TATGACTACATAATAGTAGG+TGG | + | chr2.3:3679414-3679433 | MS.gene76139:CDS | 30.0% | |
TCATAGGTGAATCCATTAAA+AGG | - | chr2.3:3682747-3682766 | None:intergenic | 30.0% | |
TCATTAGTATAAGTCGTGAA+TGG | + | chr2.3:3682400-3682419 | MS.gene76139:intron | 30.0% | |
TCGTTAAACTGTTCATGAAA+CGG | - | chr2.3:3684427-3684446 | None:intergenic | 30.0% | |
TCTAATGCAATGCACATATT+GGG | + | chr2.3:3680377-3680396 | MS.gene76139:intron | 30.0% | |
TGACAACTTTCACATTACTT+TGG | + | chr2.3:3679542-3679561 | MS.gene76139:CDS | 30.0% | |
TGACATACACATATGATCAT+AGG | - | chr2.3:3679020-3679039 | None:intergenic | 30.0% | |
TGAGCAACAAAATCACAAAA+GGG | + | chr2.3:3680826-3680845 | MS.gene76139:intron | 30.0% | |
TGCAGATTTATACAGAAGAT+GGG | + | chr2.3:3682600-3682619 | MS.gene76139:intron | 30.0% | |
TTACTTCCACGACATAAATT+GGG | - | chr2.3:3681482-3681501 | None:intergenic | 30.0% | |
TTCAATATACACACCCTTAT+TGG | - | chr2.3:3683456-3683475 | None:intergenic | 30.0% | |
TTCTAATGCAATGCACATAT+TGG | + | chr2.3:3680376-3680395 | MS.gene76139:intron | 30.0% | |
TTTATGTCGTGGAAGTAATT+AGG | + | chr2.3:3681484-3681503 | MS.gene76139:intron | 30.0% | |
! | AACAGTTGGTATTACCAATA+AGG | + | chr2.3:3683439-3683458 | MS.gene76139:CDS | 30.0% |
! | ACAGTTGGTATTACCAATAA+GGG | + | chr2.3:3683440-3683459 | MS.gene76139:CDS | 30.0% |
! | AGACACCTAACAAGTTTTTA+TGG | + | chr2.3:3681284-3681303 | MS.gene76139:intron | 30.0% |
! | ATCAAAACAGTGAGTTTGTT+AGG | - | chr2.3:3682858-3682877 | None:intergenic | 30.0% |
! | ATGTATCTGGTAGTGATAAA+AGG | + | chr2.3:3680792-3680811 | MS.gene76139:intron | 30.0% |
! | ATGTGCCATAAAAACTTGTT+AGG | - | chr2.3:3681292-3681311 | None:intergenic | 30.0% |
! | CATTGTTGTTGTTCCAAATT+AGG | - | chr2.3:3680601-3680620 | None:intergenic | 30.0% |
! | CTTTTGTGATAAACCAGATT+GGG | + | chr2.3:3683813-3683832 | MS.gene76139:intron | 30.0% |
! | GTTCTTCACAAAAGCTTTAA+TGG | - | chr2.3:3683879-3683898 | None:intergenic | 30.0% |
! | TACTTGACAACAGATTTGTT+GGG | + | chr2.3:3683342-3683361 | MS.gene76139:CDS | 30.0% |
!! | AAAAGCATCTTACAAAATCG+GGG | - | chr2.3:3682297-3682316 | None:intergenic | 30.0% |
!! | AAAATATAAAAGCACTGCCA+AGG | + | chr2.3:3681942-3681961 | MS.gene76139:intron | 30.0% |
!! | AAACATTGAAGTTTTGTGAG+AGG | - | chr2.3:3679470-3679489 | None:intergenic | 30.0% |
!! | AACATTGAAGTTTTGTGAGA+GGG | - | chr2.3:3679469-3679488 | None:intergenic | 30.0% |
!! | AATGTTTTGTTGCTTGAAAG+AGG | + | chr2.3:3679483-3679502 | MS.gene76139:CDS | 30.0% |
!! | CATTCCAATAGAAGCATTTA+AGG | + | chr2.3:3683907-3683926 | MS.gene76139:CDS | 30.0% |
!! | CTAACTCTAGGGTTAAAATA+AGG | + | chr2.3:3679260-3679279 | MS.gene76139:intron | 30.0% |
!! | CTACCAGATACATGTTTTTA+CGG | - | chr2.3:3680785-3680804 | None:intergenic | 30.0% |
!! | GAACTTGCTTTTCTTATGAA+AGG | - | chr2.3:3679348-3679367 | None:intergenic | 30.0% |
!! | GAAGAGTACTCTTTGAATAA+TGG | + | chr2.3:3680880-3680899 | MS.gene76139:intron | 30.0% |
!! | GAAGATTTTAAGAGATAGGT+TGG | + | chr2.3:3684639-3684658 | MS.gene76139:CDS | 30.0% |
!! | GAGTGAAGATTTTAAGAGAT+AGG | + | chr2.3:3684635-3684654 | MS.gene76139:CDS | 30.0% |
!! | GTTAGGAGTACTTATTTGTT+AGG | + | chr2.3:3681208-3681227 | MS.gene76139:intron | 30.0% |
!! | TGCTTTACTGATTTCTTAAG+AGG | - | chr2.3:3683407-3683426 | None:intergenic | 30.0% |
!! | TTTGTTGTTCTCTAACTCTA+GGG | + | chr2.3:3679249-3679268 | MS.gene76139:intron | 30.0% |
!!! | AAGGTTTTTTGACTGTGTAA+TGG | + | chr2.3:3678812-3678831 | MS.gene76139:intron | 30.0% |
!!! | AAGTGTTTCTATTTTTGGTC+GGG | + | chr2.3:3680196-3680215 | MS.gene76139:intron | 30.0% |
!!! | AGACTTATTTTTTTAGGCCT+AGG | - | chr2.3:3680461-3680480 | None:intergenic | 30.0% |
!!! | ATATGTTAGGTTTTTTTGGG+TGG | - | chr2.3:3681752-3681771 | None:intergenic | 30.0% |
!!! | TTTTGTTGTTCTCTAACTCT+AGG | + | chr2.3:3679248-3679267 | MS.gene76139:intron | 30.0% |
AAAAAGACCAAAAGCAATGG+GGG | + | chr2.3:3683157-3683176 | MS.gene76139:CDS | 35.0% | |
AAAAATGGTTCCACCAACTT+TGG | - | chr2.3:3682784-3682803 | None:intergenic | 35.0% | |
AAGTTTCGCACTATATAGCA+AGG | + | chr2.3:3681991-3682010 | MS.gene76139:intron | 35.0% | |
ACTAATGAGCATGCACATAA+TGG | - | chr2.3:3682388-3682407 | None:intergenic | 35.0% | |
ACTTCTTAACAACACTGTGA+AGG | + | chr2.3:3684147-3684166 | MS.gene76139:CDS | 35.0% | |
AGCAAGGCTCCTTAATTTAT+AGG | + | chr2.3:3682007-3682026 | MS.gene76139:intron | 35.0% | |
AGCTTGGAAACAGAAAGATA+TGG | + | chr2.3:3680402-3680421 | MS.gene76139:intron | 35.0% | |
AGGAAAAAGACCAAAAGCAA+TGG | + | chr2.3:3683154-3683173 | MS.gene76139:intron | 35.0% | |
ATAACCATCATTTGTGTTGG+TGG | - | chr2.3:3679397-3679416 | None:intergenic | 35.0% | |
ATCACTATTTGGCACTATCA+TGG | + | chr2.3:3684241-3684260 | MS.gene76139:CDS | 35.0% | |
ATCTGTTGACAAGAAGAACT+GGG | - | chr2.3:3679592-3679611 | None:intergenic | 35.0% | |
ATCTTATGCGTGCTTATTTG+CGG | + | chr2.3:3680012-3680031 | MS.gene76139:intron | 35.0% | |
ATGACTTATCTTTCGTGACA+AGG | - | chr2.3:3682499-3682518 | None:intergenic | 35.0% | |
ATGCTATTACTCAGTGGAAT+TGG | + | chr2.3:3683281-3683300 | MS.gene76139:CDS | 35.0% | |
ATTTATACAGAAGATGGGGT+GGG | + | chr2.3:3682605-3682624 | MS.gene76139:CDS | 35.0% | |
CATCAAATATAGTTAGAGGG+GGG | - | chr2.3:3678765-3678784 | None:intergenic | 35.0% | |
CATTGACATGCTTTGGTATA+AGG | - | chr2.3:3684183-3684202 | None:intergenic | 35.0% | |
GAAAAAAAACCTTGGCATAG+AGG | - | chr2.3:3678743-3678762 | None:intergenic | 35.0% | |
GAAAAAGACCAAAAGCAATG+GGG | + | chr2.3:3683156-3683175 | MS.gene76139:CDS | 35.0% | |
GAGTACTCTTTGAATAATGG+TGG | + | chr2.3:3680883-3680902 | MS.gene76139:intron | 35.0% | |
GCAGATTTATACAGAAGATG+GGG | + | chr2.3:3682601-3682620 | MS.gene76139:intron | 35.0% | |
GGAAAAAGACCAAAAGCAAT+GGG | + | chr2.3:3683155-3683174 | MS.gene76139:intron | 35.0% | |
GGCTAATCAAGTTTAGTAGA+TGG | + | chr2.3:3683612-3683631 | MS.gene76139:intron | 35.0% | |
GTACTTGACAACAGATTTGT+TGG | + | chr2.3:3683341-3683360 | MS.gene76139:CDS | 35.0% | |
GTCATAACCATCATTTGTGT+TGG | - | chr2.3:3679400-3679419 | None:intergenic | 35.0% | |
GTTGCATCAAATGTTGATGT+AGG | + | chr2.3:3680991-3681010 | MS.gene76139:intron | 35.0% | |
TATGTTTGTCACAGGTACAT+GGG | + | chr2.3:3684613-3684632 | MS.gene76139:intron | 35.0% | |
TCTGTATCATTGACATGCTT+TGG | - | chr2.3:3684190-3684209 | None:intergenic | 35.0% | |
TGAAAATGGGAAACAGCATA+AGG | + | chr2.3:3683193-3683212 | MS.gene76139:CDS | 35.0% | |
TGAGAACTTGAAAATTCCTG+TGG | + | chr2.3:3683319-3683338 | MS.gene76139:CDS | 35.0% | |
TTATGTTTGTCACAGGTACA+TGG | + | chr2.3:3684612-3684631 | MS.gene76139:intron | 35.0% | |
TTCACCTATGAACACAAGTA+TGG | + | chr2.3:3682756-3682775 | MS.gene76139:CDS | 35.0% | |
TTGCCGTAAAAACATGTATC+TGG | + | chr2.3:3680779-3680798 | MS.gene76139:intron | 35.0% | |
TTGTCAAGAAATGACACGTT+GGG | - | chr2.3:3679528-3679547 | None:intergenic | 35.0% | |
TTTAATCCAGCAGCTATAGT+AGG | - | chr2.3:3681875-3681894 | None:intergenic | 35.0% | |
TTTACCGAACACAATCAACA+AGG | + | chr2.3:3683672-3683691 | MS.gene76139:intron | 35.0% | |
TTTATTTACAAGGCTTGCAC+AGG | - | chr2.3:3684557-3684576 | None:intergenic | 35.0% | |
! | AAAATTACCCCCATTGCTTT+TGG | - | chr2.3:3683167-3683186 | None:intergenic | 35.0% |
! | AAGTTCTCAAGTTCTGCTTT+TGG | - | chr2.3:3683308-3683327 | None:intergenic | 35.0% |
! | AGACATCTAAAGCGTGATTT+AGG | + | chr2.3:3683004-3683023 | MS.gene76139:intron | 35.0% |
! | AGCCACTAGAATTAGTTTAG+TGG | + | chr2.3:3682059-3682078 | MS.gene76139:intron | 35.0% |
! | AGGACCCATTTGTTTAACTT+AGG | + | chr2.3:3681523-3681542 | MS.gene76139:intron | 35.0% |
! | ATCGTCCAACATTTTCACAT+TGG | + | chr2.3:3682679-3682698 | MS.gene76139:CDS | 35.0% |
! | CCAATCTGGTTTATCACAAA+AGG | - | chr2.3:3683815-3683834 | None:intergenic | 35.0% |
! | CCTTTTGTGATAAACCAGAT+TGG | + | chr2.3:3683812-3683831 | MS.gene76139:intron | 35.0% |
! | CGCTTTAGATGTCTATTCTA+AGG | - | chr2.3:3682998-3683017 | None:intergenic | 35.0% |
! | GATTCTGCTGATCTTTGTTT+AGG | - | chr2.3:3683857-3683876 | None:intergenic | 35.0% |
! | GGACCCATTTGTTTAACTTA+GGG | + | chr2.3:3681524-3681543 | MS.gene76139:intron | 35.0% |
! | GTTTAACTTAGGGCTTACAA+AGG | + | chr2.3:3681534-3681553 | MS.gene76139:intron | 35.0% |
! | TGTTGATTGTGTTCGGTAAA+TGG | - | chr2.3:3683672-3683691 | None:intergenic | 35.0% |
!! | AGTTCTCAAGTTCTGCTTTT+GGG | - | chr2.3:3683307-3683326 | None:intergenic | 35.0% |
!! | AGTTGATGAGCCAAATCATA+AGG | - | chr2.3:3678715-3678734 | None:intergenic | 35.0% |
!! | GGAACCATTTTTGACAGATT+TGG | + | chr2.3:3682792-3682811 | MS.gene76139:CDS | 35.0% |
!! | TCTTTTTCATGTTGCTCTTG+AGG | - | chr2.3:3678920-3678939 | None:intergenic | 35.0% |
!! | TTTTGAGTGAAGACATACCT+CGG | - | chr2.3:3683540-3683559 | None:intergenic | 35.0% |
!!! | CTGAAGCCGTTTTTGAAATT+CGG | - | chr2.3:3681263-3681282 | None:intergenic | 35.0% |
AAACAGCATAAGGCAGTTCT+AGG | + | chr2.3:3683203-3683222 | MS.gene76139:CDS | 40.0% | |
AAATCATAAGGAGACAGAGC+AGG | - | chr2.3:3678703-3678722 | None:intergenic | 40.0% | |
AACAGACTTCGTGTCATAGA+TGG | + | chr2.3:3684316-3684335 | MS.gene76139:CDS | 40.0% | |
AACTTTCTACCTCTATGCCA+AGG | + | chr2.3:3678731-3678750 | MS.gene76139:CDS | 40.0% | |
AAGGTGAAGTAGTTGTTGTC+AGG | + | chr2.3:3681356-3681375 | MS.gene76139:intron | 40.0% | |
AAGTAGTTGAAGGTAACAGC+AGG | - | chr2.3:3684013-3684032 | None:intergenic | 40.0% | |
AAGTATGGAACCAAAGTTGG+TGG | + | chr2.3:3682771-3682790 | MS.gene76139:CDS | 40.0% | |
AATCTGTTGTCAAGTACCAC+AGG | - | chr2.3:3683338-3683357 | None:intergenic | 40.0% | |
ACTATTTGGCACTATCATGG+TGG | + | chr2.3:3684244-3684263 | MS.gene76139:CDS | 40.0% | |
AGAGAGAGACAAAGTTGCAA+CGG | + | chr2.3:3680649-3680668 | MS.gene76139:intron | 40.0% | |
AGGTGAAGTAGTTGTTGTCA+GGG | + | chr2.3:3681357-3681376 | MS.gene76139:intron | 40.0% | |
AGTAGTTGAAGGTAACAGCA+GGG | - | chr2.3:3684012-3684031 | None:intergenic | 40.0% | |
AGTGAAGTGATTGTGTCAAG+TGG | + | chr2.3:3683239-3683258 | MS.gene76139:CDS | 40.0% | |
AGTGTAGAAGCCAGCATTAA+TGG | - | chr2.3:3679658-3679677 | None:intergenic | 40.0% | |
AGTGTTCAATGCAAGAGCAA+GGG | + | chr2.3:3679614-3679633 | MS.gene76139:CDS | 40.0% | |
ATCAACATTTACCGAGTCAC+CGG | + | chr2.3:3684339-3684358 | MS.gene76139:CDS | 40.0% | |
ATCATCATGACAGTAGCTTG+AGG | - | chr2.3:3684373-3684392 | None:intergenic | 40.0% | |
ATTGAAGCTAGCTGTGGATT+TGG | + | chr2.3:3683470-3683489 | MS.gene76139:CDS | 40.0% | |
CAAGCTACTGTCATGATGAT+GGG | + | chr2.3:3684373-3684392 | MS.gene76139:CDS | 40.0% | |
CACAAGTATGGAACCAAAGT+TGG | + | chr2.3:3682768-3682787 | MS.gene76139:CDS | 40.0% | |
CAGTCACTGATAGAAACAGT+TGG | + | chr2.3:3683425-3683444 | MS.gene76139:CDS | 40.0% | |
CAGTTCTTCTTGTCAACAGA+TGG | + | chr2.3:3679591-3679610 | MS.gene76139:CDS | 40.0% | |
CATCTGTTGACAAGAAGAAC+TGG | - | chr2.3:3679593-3679612 | None:intergenic | 40.0% | |
CCACTGAGTAATAGCATTTG+AGG | - | chr2.3:3683278-3683297 | None:intergenic | 40.0% | |
CCTCAAATGCTATTACTCAG+TGG | + | chr2.3:3683275-3683294 | MS.gene76139:CDS | 40.0% | |
CCTCCCTTAAATGCTTCTAT+TGG | - | chr2.3:3683914-3683933 | None:intergenic | 40.0% | |
CGCCACTAAACTAATTCTAG+TGG | - | chr2.3:3682064-3682083 | None:intergenic | 40.0% | |
CTCTGCCAATGTGAAAATGT+TGG | - | chr2.3:3682687-3682706 | None:intergenic | 40.0% | |
GACTACATAATAGTAGGTGG+TGG | + | chr2.3:3679417-3679436 | MS.gene76139:CDS | 40.0% | |
GACTCGGATCATAAAGTTCT+TGG | + | chr2.3:3684289-3684308 | MS.gene76139:CDS | 40.0% | |
GAGACACTGTGATCACTATT+TGG | + | chr2.3:3684230-3684249 | MS.gene76139:CDS | 40.0% | |
GATTTATACAGAAGATGGGG+TGG | + | chr2.3:3682604-3682623 | MS.gene76139:intron | 40.0% | |
GCGACCAAATCTGTCAAAAA+TGG | - | chr2.3:3682799-3682818 | None:intergenic | 40.0% | |
GGCCATCCGAATTTCAAAAA+CGG | + | chr2.3:3681254-3681273 | MS.gene76139:intron | 40.0% | |
GGTTCCATACTTGTGTTCAT+AGG | - | chr2.3:3682763-3682782 | None:intergenic | 40.0% | |
GTGAAGTGATTGTGTCAAGT+GGG | + | chr2.3:3683240-3683259 | MS.gene76139:CDS | 40.0% | |
GTGTATATTGAAGCTAGCTG+TGG | + | chr2.3:3683464-3683483 | MS.gene76139:CDS | 40.0% | |
GTTACTCATGTGATTCGTGA+AGG | + | chr2.3:3681313-3681332 | MS.gene76139:intron | 40.0% | |
GTTCAAATCTGCTAGCTCAA+AGG | - | chr2.3:3683732-3683751 | None:intergenic | 40.0% | |
GTTGTCAAGAAATGACACGT+TGG | - | chr2.3:3679529-3679548 | None:intergenic | 40.0% | |
TATCTGAGTCAGGATGAAGA+GGG | + | chr2.3:3680428-3680447 | MS.gene76139:intron | 40.0% | |
TCAACCACCAACACAAATGA+TGG | + | chr2.3:3679390-3679409 | MS.gene76139:CDS | 40.0% | |
TCAAGCTACTGTCATGATGA+TGG | + | chr2.3:3684372-3684391 | MS.gene76139:CDS | 40.0% | |
TCCACGACATAAATTGGGTA+GGG | - | chr2.3:3681477-3681496 | None:intergenic | 40.0% | |
TCTTCATCCTGACTCAGATA+CGG | - | chr2.3:3680428-3680447 | None:intergenic | 40.0% | |
TGAAGTGATTGTGTCAAGTG+GGG | + | chr2.3:3683241-3683260 | MS.gene76139:CDS | 40.0% | |
TGCTCTGTCTCCTTATGATT+TGG | + | chr2.3:3678702-3678721 | MS.gene76139:CDS | 40.0% | |
TGTCAAGAAATGACACGTTG+GGG | - | chr2.3:3679527-3679546 | None:intergenic | 40.0% | |
TGTTCATGAAACGGAGTCAT+CGG | - | chr2.3:3684418-3684437 | None:intergenic | 40.0% | |
TTCCACGACATAAATTGGGT+AGG | - | chr2.3:3681478-3681497 | None:intergenic | 40.0% | |
! | AATGCAAGAGCAAGGGTTTT+GGG | + | chr2.3:3679621-3679640 | MS.gene76139:CDS | 40.0% |
! | AGAATTAGTTTAGTGGCGAG+AGG | + | chr2.3:3682066-3682085 | MS.gene76139:intron | 40.0% |
! | AGCAATGGGGGTAATTTTCA+AGG | + | chr2.3:3683169-3683188 | MS.gene76139:CDS | 40.0% |
! | CATCTAAAGCGTGATTTAGG+TGG | + | chr2.3:3683007-3683026 | MS.gene76139:intron | 40.0% |
! | CTCGATACTTGATGGTTGAA+AGG | - | chr2.3:3679945-3679964 | None:intergenic | 40.0% |
! | CTGCTGATCTTTGTTTAGGT+GGG | - | chr2.3:3683853-3683872 | None:intergenic | 40.0% |
! | GATAGGTTGGGAAAATTTGC+TGG | + | chr2.3:3684652-3684671 | MS.gene76139:CDS | 40.0% |
! | TCTGCTGATCTTTGTTTAGG+TGG | - | chr2.3:3683854-3683873 | None:intergenic | 40.0% |
! | TTGGTGGTTGAAATTGATGG+TGG | - | chr2.3:3679381-3679400 | None:intergenic | 40.0% |
! | TTTTCATGTTGCTCTTGAGG+TGG | - | chr2.3:3678917-3678936 | None:intergenic | 40.0% |
!! | ACATTGGCAGAGAGCATTTA+GGG | + | chr2.3:3682695-3682714 | MS.gene76139:CDS | 40.0% |
!! | AGGCAGTTCTAGGAAATGAT+AGG | + | chr2.3:3683213-3683232 | MS.gene76139:CDS | 40.0% |
!! | ATGATGGGCAGGTATGTATA+GGG | + | chr2.3:3684388-3684407 | MS.gene76139:intron | 40.0% |
!! | CCAATAGAAGCATTTAAGGG+AGG | + | chr2.3:3683911-3683930 | MS.gene76139:CDS | 40.0% |
!! | GACAACAGATTTGTTGGGAA+GGG | + | chr2.3:3683347-3683366 | MS.gene76139:CDS | 40.0% |
!! | GTGTTGGTGGTTGAAATTGA+TGG | - | chr2.3:3679384-3679403 | None:intergenic | 40.0% |
!! | GTTTTGTTGCTTGAAAGAGG+AGG | + | chr2.3:3679486-3679505 | MS.gene76139:CDS | 40.0% |
!! | TGACAACAGATTTGTTGGGA+AGG | + | chr2.3:3683346-3683365 | MS.gene76139:CDS | 40.0% |
!! | TGTCTATTCTAAGGCGTGAA+TGG | - | chr2.3:3682989-3683008 | None:intergenic | 40.0% |
!!! | AGCCGTTTTTGAAATTCGGA+TGG | - | chr2.3:3681259-3681278 | None:intergenic | 40.0% |
!!! | GTTTCTATTTTTGGTCGGGT+GGG | + | chr2.3:3680200-3680219 | MS.gene76139:intron | 40.0% |
!!! | TGTTTCTATTTTTGGTCGGG+TGG | + | chr2.3:3680199-3680218 | MS.gene76139:intron | 40.0% |
AAAGCAATTCAGCAGCAGTG+TGG | - | chr2.3:3682824-3682843 | None:intergenic | 45.0% | |
AAGAACTGGGAAGCTGAAGT+TGG | - | chr2.3:3679579-3679598 | None:intergenic | 45.0% | |
ACAATCTGCTTCTCAACCCA+AGG | - | chr2.3:3682657-3682676 | None:intergenic | 45.0% | |
ACCCTACCCAATTTATGTCG+TGG | + | chr2.3:3681473-3681492 | MS.gene76139:intron | 45.0% | |
AGAGGGGGGAAAAAAAACCT+TGG | - | chr2.3:3678751-3678770 | None:intergenic | 45.0% | |
AGGGTGACTGAAGTAGTTGA+AGG | - | chr2.3:3684023-3684042 | None:intergenic | 45.0% | |
AGTCGATAACCTTCCCTACA+TGG | - | chr2.3:3684273-3684292 | None:intergenic | 45.0% | |
AGTTTAGTGGCGAGAGGTTT+GGG | + | chr2.3:3682072-3682091 | MS.gene76139:intron | 45.0% | |
ATCTGCTAGCTCAAAGGATG+AGG | - | chr2.3:3683726-3683745 | None:intergenic | 45.0% | |
ATGCACATATTGGGTGAGCT+TGG | + | chr2.3:3680386-3680405 | MS.gene76139:intron | 45.0% | |
ATTGTGTCAAGTGGGGCAAT+TGG | + | chr2.3:3683248-3683267 | MS.gene76139:CDS | 45.0% | |
GAGTGTTCAATGCAAGAGCA+AGG | + | chr2.3:3679613-3679632 | MS.gene76139:CDS | 45.0% | |
GCTGCTGAATTGCTTTCTTC+TGG | + | chr2.3:3682828-3682847 | MS.gene76139:CDS | 45.0% | |
GGTGAAGTAGTTGTTGTCAG+GGG | + | chr2.3:3681358-3681377 | MS.gene76139:intron | 45.0% | |
GTATCTGAGTCAGGATGAAG+AGG | + | chr2.3:3680427-3680446 | MS.gene76139:intron | 45.0% | |
GTGGCAATGAATGCTGTCAT+TGG | - | chr2.3:3683501-3683520 | None:intergenic | 45.0% | |
GTTGCTAATCCATGGTCAAC+AGG | + | chr2.3:3683950-3683969 | MS.gene76139:CDS | 45.0% | |
TAGTTTAGTGGCGAGAGGTT+TGG | + | chr2.3:3682071-3682090 | MS.gene76139:intron | 45.0% | |
TCAACATTTACCGAGTCACC+GGG | + | chr2.3:3684340-3684359 | MS.gene76139:CDS | 45.0% | |
TCTACACTAGAGCAAGCTCA+AGG | + | chr2.3:3679670-3679689 | MS.gene76139:CDS | 45.0% | |
TCTGCTAGCTCAAAGGATGA+GGG | - | chr2.3:3683725-3683744 | None:intergenic | 45.0% | |
TGTCAGTGCTCGATACTTGA+TGG | - | chr2.3:3679953-3679972 | None:intergenic | 45.0% | |
TTGAGATCACCTGTTGACCA+TGG | - | chr2.3:3683962-3683981 | None:intergenic | 45.0% | |
! | CAATGCAAGAGCAAGGGTTT+TGG | + | chr2.3:3679620-3679639 | MS.gene76139:CDS | 45.0% |
! | CACGCCTTGTTGATTGTGTT+CGG | - | chr2.3:3683679-3683698 | None:intergenic | 45.0% |
! | GCTGGTGTGTCTCCTTTTAA+TGG | + | chr2.3:3682732-3682751 | MS.gene76139:CDS | 45.0% |
! | GTAGCTTGAGGATTTGTTCC+CGG | - | chr2.3:3684361-3684380 | None:intergenic | 45.0% |
! | TAGGTGCAAGTGTCGTATGT+AGG | + | chr2.3:3681503-3681522 | MS.gene76139:intron | 45.0% |
! | TGTAGGGAAGGTTATCGACT+CGG | + | chr2.3:3684273-3684292 | MS.gene76139:CDS | 45.0% |
!! | ATCATGGTGGATGCCATGTA+GGG | + | chr2.3:3684257-3684276 | MS.gene76139:CDS | 45.0% |
!! | CACATTGGCAGAGAGCATTT+AGG | + | chr2.3:3682694-3682713 | MS.gene76139:CDS | 45.0% |
!! | CAGATTTGTTGGGAAGGGTA+TGG | + | chr2.3:3683352-3683371 | MS.gene76139:CDS | 45.0% |
!! | GATGATGGGCAGGTATGTAT+AGG | + | chr2.3:3684387-3684406 | MS.gene76139:intron | 45.0% |
!! | GATTTGTGAAGTGCTGTGAC+TGG | - | chr2.3:3684096-3684115 | None:intergenic | 45.0% |
!! | TATCATGGTGGATGCCATGT+AGG | + | chr2.3:3684256-3684275 | MS.gene76139:CDS | 45.0% |
!!! | ATAATATTATTTCTTAAATT+TGG | + | chr2.3:3681694-3681713 | MS.gene76139:intron | 5.0% |
ACAAGGCTTGCACAGGAGAT+TGG | - | chr2.3:3684550-3684569 | None:intergenic | 50.0% | |
ACCGGGACACGATAAAACCT+TGG | - | chr2.3:3681962-3681981 | None:intergenic | 50.0% | |
ACGCAGCGATGAAGATCGTA+AGG | - | chr2.3:3684043-3684062 | None:intergenic | 50.0% | |
AGGAATCCGGCTAGCAACAA+AGG | + | chr2.3:3684066-3684085 | MS.gene76139:CDS | 50.0% | |
AGGGATGGTCTTCTAGATGC+TGG | + | chr2.3:3682714-3682733 | MS.gene76139:CDS | 50.0% | |
CGCAGCGATGAAGATCGTAA+GGG | - | chr2.3:3684042-3684061 | None:intergenic | 50.0% | |
GACACGTTGGGGTTTGTGAA+AGG | - | chr2.3:3679516-3679535 | None:intergenic | 50.0% | |
GACAGCATTCATTGCCACCA+TGG | + | chr2.3:3683503-3683522 | MS.gene76139:CDS | 50.0% | |
GACGAACCTACTATAGCTGC+TGG | + | chr2.3:3681866-3681885 | MS.gene76139:intron | 50.0% | |
GATATGGCCGTATCTGAGTC+AGG | + | chr2.3:3680418-3680437 | MS.gene76139:intron | 50.0% | |
GGACAACCTTTGTTGCTAGC+CGG | - | chr2.3:3684075-3684094 | None:intergenic | 50.0% | |
GGTGGTAGCTCCATTAATGC+TGG | + | chr2.3:3679645-3679664 | MS.gene76139:CDS | 50.0% | |
GTGAGAGGGTTGCAGCTAAA+GGG | - | chr2.3:3679455-3679474 | None:intergenic | 50.0% | |
TGTGAGAGGGTTGCAGCTAA+AGG | - | chr2.3:3679456-3679475 | None:intergenic | 50.0% | |
TTGTTGAGAGCTGCCCAATC+TGG | - | chr2.3:3683829-3683848 | None:intergenic | 50.0% | |
! | AGGATTTGTTCCCGGTGACT+CGG | - | chr2.3:3684353-3684372 | None:intergenic | 50.0% |
! | CGAAACTTTTACGCACGACC+GGG | - | chr2.3:3681979-3681998 | None:intergenic | 50.0% |
! | GCGAAACTTTTACGCACGAC+CGG | - | chr2.3:3681980-3681999 | None:intergenic | 50.0% |
!! | ATAGTAGGTGGTGGAACAGC+AGG | + | chr2.3:3679426-3679445 | MS.gene76139:CDS | 50.0% |
!! | CTACTGTCATGATGATGGGC+AGG | + | chr2.3:3684377-3684396 | MS.gene76139:CDS | 50.0% |
!! | GCCAAGGTTTTATCGTGTCC+CGG | + | chr2.3:3681958-3681977 | MS.gene76139:intron | 50.0% |
!! | TAGTAGGTGGTGGAACAGCA+GGG | + | chr2.3:3679427-3679446 | MS.gene76139:CDS | 50.0% |
!! | TGGCAGAGAGCATTTAGGGA+TGG | + | chr2.3:3682699-3682718 | MS.gene76139:CDS | 50.0% |
ATCGCTGCGTCGAAGGAATC+CGG | + | chr2.3:3684053-3684072 | MS.gene76139:CDS | 55.0% | |
ATGAAGAGGGCAGCAGTCCT+AGG | + | chr2.3:3680441-3680460 | MS.gene76139:intron | 55.0% | |
CCTCGGCTGATAGCAAACCA+TGG | - | chr2.3:3683523-3683542 | None:intergenic | 55.0% | |
CGGCTGATAGCAAACCATGG+TGG | - | chr2.3:3683520-3683539 | None:intergenic | 55.0% | |
GATCTTCATCGCTGCGTCGA+AGG | + | chr2.3:3684046-3684065 | MS.gene76139:CDS | 55.0% | |
GCAATTCAGCAGCAGTGTGG+CGG | - | chr2.3:3682821-3682840 | None:intergenic | 55.0% | |
! | TGGTGGATGCCATGTAGGGA+AGG | + | chr2.3:3684261-3684280 | MS.gene76139:CDS | 55.0% |
!! | CCATGGTTTGCTATCAGCCG+AGG | + | chr2.3:3683520-3683539 | MS.gene76139:CDS | 55.0% |
!!! | AGAGCAAGGGTTTTGGGTGG+TGG | + | chr2.3:3679627-3679646 | MS.gene76139:CDS | 55.0% |
!!! | GCAAGAGCAAGGGTTTTGGG+TGG | + | chr2.3:3679624-3679643 | MS.gene76139:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 3678674 | 3684681 | 3678674 | ID=MS.gene76139 |
chr2.3 | mRNA | 3678674 | 3684681 | 3678674 | ID=MS.gene76139.t1;Parent=MS.gene76139 |
chr2.3 | exon | 3678674 | 3678752 | 3678674 | ID=MS.gene76139.t1.exon1;Parent=MS.gene76139.t1 |
chr2.3 | CDS | 3678674 | 3678752 | 3678674 | ID=cds.MS.gene76139.t1;Parent=MS.gene76139.t1 |
chr2.3 | exon | 3679313 | 3679691 | 3679313 | ID=MS.gene76139.t1.exon2;Parent=MS.gene76139.t1 |
chr2.3 | CDS | 3679313 | 3679691 | 3679313 | ID=cds.MS.gene76139.t1;Parent=MS.gene76139.t1 |
chr2.3 | exon | 3682605 | 3682915 | 3682605 | ID=MS.gene76139.t1.exon3;Parent=MS.gene76139.t1 |
chr2.3 | CDS | 3682605 | 3682915 | 3682605 | ID=cds.MS.gene76139.t1;Parent=MS.gene76139.t1 |
chr2.3 | exon | 3683156 | 3683541 | 3683156 | ID=MS.gene76139.t1.exon4;Parent=MS.gene76139.t1 |
chr2.3 | CDS | 3683156 | 3683541 | 3683156 | ID=cds.MS.gene76139.t1;Parent=MS.gene76139.t1 |
chr2.3 | exon | 3683830 | 3684398 | 3683830 | ID=MS.gene76139.t1.exon5;Parent=MS.gene76139.t1 |
chr2.3 | CDS | 3683830 | 3684398 | 3683830 | ID=cds.MS.gene76139.t1;Parent=MS.gene76139.t1 |
chr2.3 | exon | 3684627 | 3684681 | 3684627 | ID=MS.gene76139.t1.exon6;Parent=MS.gene76139.t1 |
chr2.3 | CDS | 3684627 | 3684681 | 3684627 | ID=cds.MS.gene76139.t1;Parent=MS.gene76139.t1 |
Gene Sequence |
Protein sequence |