Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34288.t1 | XP_003604138.1 | 97.9 | 568 | 11 | 1 | 1 | 568 | 1 | 567 | 1.80E-305 | 1057.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34288.t1 | Q9SSM2 | 70.1 | 522 | 147 | 2 | 39 | 560 | 38 | 550 | 6.8e-216 | 751.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34288.t1 | G7JVJ8 | 97.9 | 568 | 11 | 1 | 1 | 568 | 1 | 567 | 1.3e-305 | 1057.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34288 | MS.gene85210 | PPI |
| MS.gene051939 | MS.gene34288 | PPI |
| MS.gene76139 | MS.gene34288 | PPI |
| MS.gene34288 | MS.gene020251 | PPI |
| MS.gene07761 | MS.gene34288 | PPI |
| MS.gene011194 | MS.gene34288 | PPI |
| MS.gene34288 | MS.gene057022 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34288.t1 | MTR_4g005860 | 97.887 | 568 | 11 | 1 | 1 | 568 | 1 | 567 | 0.0 | 1135 |
| MS.gene34288.t1 | MTR_5g011010 | 46.422 | 573 | 258 | 10 | 21 | 560 | 17 | 573 | 1.72e-166 | 486 |
| MS.gene34288.t1 | MTR_5g011020 | 46.000 | 550 | 253 | 8 | 43 | 560 | 1 | 538 | 5.87e-163 | 475 |
| MS.gene34288.t1 | MTR_2g100070 | 45.055 | 546 | 249 | 10 | 53 | 563 | 61 | 590 | 6.10e-149 | 441 |
| MS.gene34288.t1 | MTR_8g016320 | 42.714 | 597 | 280 | 11 | 9 | 563 | 6 | 582 | 5.87e-146 | 433 |
| MS.gene34288.t1 | MTR_1g101770 | 42.143 | 560 | 275 | 11 | 35 | 560 | 27 | 571 | 2.20e-145 | 431 |
| MS.gene34288.t1 | MTR_5g041340 | 42.807 | 570 | 256 | 17 | 10 | 561 | 15 | 532 | 2.86e-131 | 394 |
| MS.gene34288.t1 | MTR_1g101760 | 34.773 | 463 | 190 | 10 | 55 | 465 | 46 | 448 | 4.73e-71 | 235 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34288.t1 | AT1G73050 | 69.173 | 532 | 155 | 2 | 29 | 560 | 28 | 550 | 0.0 | 772 |
| MS.gene34288.t1 | AT1G12570 | 43.824 | 591 | 261 | 11 | 15 | 563 | 10 | 571 | 2.21e-157 | 462 |
| MS.gene34288.t1 | AT1G72970 | 46.225 | 543 | 241 | 7 | 55 | 562 | 63 | 589 | 3.68e-157 | 462 |
| MS.gene34288.t1 | AT1G72970 | 46.211 | 541 | 217 | 8 | 55 | 562 | 63 | 562 | 1.80e-152 | 449 |
| MS.gene34288.t1 | AT5G51950 | 43.027 | 588 | 280 | 10 | 14 | 561 | 5 | 577 | 2.04e-146 | 434 |
| MS.gene34288.t1 | AT5G51950 | 42.833 | 586 | 282 | 9 | 14 | 561 | 5 | 575 | 4.80e-146 | 434 |
| MS.gene34288.t1 | AT5G51950 | 44.165 | 557 | 258 | 9 | 43 | 561 | 1 | 542 | 3.22e-145 | 430 |
| MS.gene34288.t1 | AT3G56060 | 43.471 | 582 | 273 | 13 | 11 | 560 | 10 | 567 | 2.33e-144 | 429 |
| MS.gene34288.t1 | AT5G51930 | 42.058 | 554 | 263 | 9 | 43 | 560 | 14 | 545 | 4.64e-134 | 402 |
| MS.gene34288.t1 | AT5G51930 | 40.342 | 585 | 282 | 12 | 2 | 550 | 29 | 582 | 2.54e-130 | 393 |
| MS.gene34288.t1 | AT1G14190 | 42.468 | 551 | 261 | 13 | 18 | 561 | 4 | 505 | 5.54e-129 | 388 |
| MS.gene34288.t1 | AT1G14190 | 43.774 | 514 | 237 | 11 | 55 | 561 | 16 | 484 | 6.44e-128 | 384 |
| MS.gene34288.t1 | AT1G14185 | 42.441 | 549 | 259 | 13 | 18 | 559 | 4 | 502 | 1.43e-126 | 381 |
Find 137 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACGAAATCTGGTCTTAAT+TGG | 0.142795 | 4.2:-93430295 | MS.gene34288:CDS |
| GAAGAACTTGTTGCAGAATT+TGG | 0.156869 | 4.2:+93428807 | None:intergenic |
| GCAACAAGTTCTTCTGTTAT+TGG | 0.179811 | 4.2:-93428798 | MS.gene34288:CDS |
| GAAGGTGGATCCACCAATTT+TGG | 0.192380 | 4.2:+93430118 | None:intergenic |
| GTTAATGGGACCAGGAAATT+AGG | 0.206556 | 4.2:-93428270 | MS.gene34288:CDS |
| AACGCTCGCGGCCGTGTTCT+TGG | 0.236995 | 4.2:-93430371 | MS.gene34288:CDS |
| CGTGAATTCTTTACGAAATC+TGG | 0.247802 | 4.2:-93430305 | MS.gene34288:CDS |
| CTTCTTCTTCTCAGTGGAAT+TGG | 0.262837 | 4.2:-93428678 | MS.gene34288:CDS |
| AGAAACCTTCTTGGTTCATT+AGG | 0.292591 | 4.2:+93430480 | None:intergenic |
| ACACTGATTTCGAAGATTTC+AGG | 0.309005 | 4.2:-93428396 | MS.gene34288:CDS |
| CATGCTAGTGGTACCAAAAT+TGG | 0.317967 | 4.2:-93430131 | MS.gene34288:CDS |
| GTGTGTTCAAGAAACCTTCT+TGG | 0.328498 | 4.2:+93430471 | None:intergenic |
| TTAATGGGACCAGGAAATTA+GGG | 0.334456 | 4.2:-93428269 | MS.gene34288:CDS |
| GTTCTTTATCGTGATCAAAA+TGG | 0.338249 | 4.2:-93428774 | MS.gene34288:CDS |
| GCATAATCCGTTTGATCATT+AGG | 0.352383 | 4.2:+93428159 | None:intergenic |
| CTAGACCTTATCTTTCTTCA+TGG | 0.352397 | 4.2:-93428653 | MS.gene34288:CDS |
| GATTGGCTTCGACTGATGTT+AGG | 0.369126 | 4.2:-93428350 | MS.gene34288:CDS |
| AAACTGTATGGAAACGGTTA+TGG | 0.377057 | 4.2:+93430745 | None:intergenic |
| GATGTTGAGAAATGTGTTAA+TGG | 0.377142 | 4.2:-93428285 | MS.gene34288:CDS |
| GGTACCACTAGCATGATCTA+AGG | 0.379105 | 4.2:+93430139 | None:intergenic |
| TCTAAGGTGAAACCGTTATA+AGG | 0.383427 | 4.2:+93430155 | None:intergenic |
| GAAGGACTGTTAGTACTATA+TGG | 0.383898 | 4.2:-93428116 | MS.gene34288:CDS |
| AATCGTGATCTTAAGGTCAT+TGG | 0.385738 | 4.2:-93428057 | MS.gene34288:CDS |
| TACGAAATCTGGTCTTAATT+GGG | 0.386921 | 4.2:-93430294 | MS.gene34288:CDS |
| GGATGAGAACGCGGTGGGAT+TGG | 0.388738 | 4.2:+93430537 | None:intergenic |
| CGCCGGTGAATCGTCGTTGT+TGG | 0.390764 | 4.2:+93430424 | None:intergenic |
| TGGGAGAGTGTGGCGGCTAA+TGG | 0.392181 | 4.2:+93430557 | None:intergenic |
| GTTGTAGGAATAACGAATTC+AGG | 0.393213 | 4.2:-93428519 | MS.gene34288:CDS |
| GATGAGAACGCGGTGGGATT+GGG | 0.395362 | 4.2:+93430538 | None:intergenic |
| GGTTGTTAATCGTGATCTTA+AGG | 0.397619 | 4.2:-93428064 | MS.gene34288:CDS |
| CATTCGCTTATACAAGTTGT+AGG | 0.403048 | 4.2:-93428534 | MS.gene34288:CDS |
| TGGAATCACGATTCTGCCTT+CGG | 0.404154 | 4.2:-93428568 | MS.gene34288:CDS |
| AAGTACATCCCCTAATTTCC+TGG | 0.405196 | 4.2:+93428260 | None:intergenic |
| ATTCTTTCAGCAGGTGCAAT+TGG | 0.407545 | 4.2:-93428711 | MS.gene34288:CDS |
| CGTAGAAAACCGGCAGAAAC+CGG | 0.412324 | 4.2:+93428372 | None:intergenic |
| AAGATGAAGAAGATGCTAGA+AGG | 0.417140 | 4.2:+93428838 | None:intergenic |
| ATGGTGGATGTGTTGTTGGT+AGG | 0.430524 | 4.2:-93428086 | MS.gene34288:CDS |
| TGGTGGATGTGTTGTTGGTA+GGG | 0.434259 | 4.2:-93428085 | MS.gene34288:CDS |
| ATGTTGAGAAATGTGTTAAT+GGG | 0.437949 | 4.2:-93428284 | MS.gene34288:CDS |
| TAAGAGTAATAGAAACTGTA+TGG | 0.438588 | 4.2:+93430733 | None:intergenic |
| TCTTTCCACACTAGCGTAAA+CGG | 0.438756 | 4.2:+93428863 | None:intergenic |
| TATCATGGTGGATGTGTTGT+TGG | 0.442678 | 4.2:-93428090 | MS.gene34288:CDS |
| AATCAGAGAAAGGGAAGGGA+AGG | 0.443483 | 4.2:-93427807 | MS.gene34288:CDS |
| AAGTAATTAAACCTGACAAT+AGG | 0.447800 | 4.2:+93428321 | None:intergenic |
| TGCTTTGCCTAATGATCAAA+CGG | 0.449786 | 4.2:-93428166 | MS.gene34288:CDS |
| GGATGACTCCGCCGCGTTCG+AGG | 0.453717 | 4.2:+93430516 | None:intergenic |
| CGTGATGGTCTTCTTGAAGC+TGG | 0.456148 | 4.2:-93430185 | MS.gene34288:CDS |
| GTAGCCTGAGGATTAGTTCC+AGG | 0.458455 | 4.2:+93427988 | None:intergenic |
| TTAGGTTTAATCCTATTGTC+AGG | 0.459432 | 4.2:-93428332 | MS.gene34288:CDS |
| TTTAAGTTTAGGAATTGGTT+GGG | 0.463363 | 4.2:-93428216 | MS.gene34288:CDS |
| CTATATGATAATCCACGTAA+TGG | 0.466490 | 4.2:-93428588 | MS.gene34288:CDS |
| GTCGTTGTTGGCGTTGTTTG+CGG | 0.466639 | 4.2:+93430436 | None:intergenic |
| CGCCAACAACGACGATTCAC+CGG | 0.467280 | 4.2:-93430426 | MS.gene34288:CDS |
| TAGGAATTGGTTGGGTGTGA+GGG | 0.469428 | 4.2:-93428208 | MS.gene34288:CDS |
| TAGACCTTATCTTTCTTCAT+GGG | 0.473399 | 4.2:-93428652 | MS.gene34288:CDS |
| GCTGGTGTTGCTCCTTATAA+CGG | 0.474506 | 4.2:-93430167 | MS.gene34288:CDS |
| CAATCTTTCGTTTCTGAAGA+CGG | 0.476231 | 4.2:-93430401 | MS.gene34288:CDS |
| GACTGAAGATAATCAGAGAA+AGG | 0.476307 | 4.2:-93427817 | MS.gene34288:CDS |
| GGTGAAGTGATTCTTTCAGC+AGG | 0.479457 | 4.2:-93428720 | MS.gene34288:CDS |
| ATCGTCGGCGGCGGAACCGC+CGG | 0.484091 | 4.2:-93430584 | MS.gene34288:CDS |
| GGTAGTAGCGCGATTAACGC+TGG | 0.487009 | 4.2:-93430347 | MS.gene34288:CDS |
| TGTTGAGAAGCGAAGGAAGA+GGG | 0.491755 | 4.2:+93430689 | None:intergenic |
| TGCTTCTCCACTTTATCTGA+CGG | 0.493718 | 4.2:-93428424 | MS.gene34288:CDS |
| TTGTGAATGAATCGTATGAA+TGG | 0.494581 | 4.2:-93430262 | MS.gene34288:CDS |
| CGAAGCCAATCGTAGAAAAC+CGG | 0.495604 | 4.2:+93428362 | None:intergenic |
| GTTCCAACCGTCAGATAAAG+TGG | 0.500204 | 4.2:+93428417 | None:intergenic |
| TATAGAAAATGACCTACATA+AGG | 0.502167 | 4.2:+93428606 | None:intergenic |
| TCTCCACTTTATCTGACGGT+TGG | 0.504269 | 4.2:-93428420 | MS.gene34288:CDS |
| TTGTTGAGAAGCGAAGGAAG+AGG | 0.512591 | 4.2:+93430688 | None:intergenic |
| TCAAACGGATTATGCTGAAA+TGG | 0.513492 | 4.2:-93428151 | MS.gene34288:CDS |
| GCTCGCGGCCGTGTTCTTGG+TGG | 0.514647 | 4.2:-93430368 | MS.gene34288:CDS |
| ATTTCAGGACCGGTTTCTGC+CGG | 0.514852 | 4.2:-93428381 | MS.gene34288:CDS |
| CAGGCTACACTAATGATGCT+TGG | 0.515879 | 4.2:-93427973 | MS.gene34288:CDS |
| TTAGGAATTGGTTGGGTGTG+AGG | 0.516024 | 4.2:-93428209 | MS.gene34288:CDS |
| TGTGGCGGCTAATGGACAAC+CGG | 0.526105 | 4.2:+93430565 | None:intergenic |
| GTAAACGGCAATTCTGAGAT+TGG | 0.527061 | 4.2:+93428878 | None:intergenic |
| GATTTCGAAGATTTCAGGAC+CGG | 0.529103 | 4.2:-93428391 | MS.gene34288:CDS |
| AATTGATTCTCTTAGAATTG+TGG | 0.531648 | 4.2:-93428034 | MS.gene34288:CDS |
| ACTGAAGATAATCAGAGAAA+GGG | 0.533113 | 4.2:-93427816 | MS.gene34288:CDS |
| GTTTGATCATTAGGCAAAGC+AGG | 0.536120 | 4.2:+93428168 | None:intergenic |
| GGAAATTAGGGGATGTACTT+CGG | 0.540327 | 4.2:-93428257 | MS.gene34288:CDS |
| GAACGGATGAAAGCAGTTTG+CGG | 0.540483 | 4.2:+93428450 | None:intergenic |
| TAAGGTAAGTGATGTGCCAC+TGG | 0.542068 | 4.2:+93428624 | None:intergenic |
| CTACACTAATGATGCTTGGA+AGG | 0.542336 | 4.2:-93427969 | MS.gene34288:intron |
| CATGAAGAAAGATAAGGTCT+AGG | 0.544039 | 4.2:+93428654 | None:intergenic |
| TAATAGAAACTGTATGGAAA+CGG | 0.546850 | 4.2:+93430739 | None:intergenic |
| TTCACCTGGAACTAATCCTC+AGG | 0.549420 | 4.2:-93427992 | MS.gene34288:CDS |
| AGTACTATATGGCATTATCA+TGG | 0.557636 | 4.2:-93428105 | MS.gene34288:CDS |
| CGCTACTACCACCAAGAACA+CGG | 0.557746 | 4.2:+93430360 | None:intergenic |
| AGGTTTAATTACTTTAGCAA+TGG | 0.558046 | 4.2:-93428312 | MS.gene34288:CDS |
| GAACGCGGCGGAGTCATCCA+TGG | 0.559873 | 4.2:-93430512 | MS.gene34288:CDS |
| TTCTTCATGGGGAATTCCAG+TGG | 0.561226 | 4.2:-93428640 | MS.gene34288:CDS |
| GCTAGTGGTACCAAAATTGG+TGG | 0.563324 | 4.2:-93430128 | MS.gene34288:CDS |
| ATTCCCCATGAAGAAAGATA+AGG | 0.568703 | 4.2:+93428648 | None:intergenic |
| AAGATAATCAGAGAAAGGGA+AGG | 0.569345 | 4.2:-93427812 | MS.gene34288:CDS |
| GATTCTCTTAGAATTGTGGA+TGG | 0.575043 | 4.2:-93428030 | MS.gene34288:CDS |
| TTTACCTTGGGAATCGAAGG+TGG | 0.577753 | 4.2:+93430103 | None:intergenic |
| TGGCAATCTGCTGTTCGTGA+TGG | 0.578624 | 4.2:-93430200 | MS.gene34288:CDS |
| AGAAATGTGTTAATGGGACC+AGG | 0.584875 | 4.2:-93428278 | MS.gene34288:CDS |
| TAATCGTAGTAATCTTCTAA+CGG | 0.585062 | 4.2:+93430611 | None:intergenic |
| TTCGAGGATGAGAACGCGGT+GGG | 0.586566 | 4.2:+93430532 | None:intergenic |
| GGAAGAGGGAAAGAAGATTG+TGG | 0.587760 | 4.2:+93430703 | None:intergenic |
| AGACCTTATCTTTCTTCATG+GGG | 0.589226 | 4.2:-93428651 | MS.gene34288:CDS |
| GTGTTTACCTTGGGAATCGA+AGG | 0.591250 | 4.2:+93430100 | None:intergenic |
| GCGGTGGGATTGGGAGAGTG+TGG | 0.594350 | 4.2:+93430547 | None:intergenic |
| CGCGTTCTCATCCTCGAACG+CGG | 0.596495 | 4.2:-93430527 | MS.gene34288:CDS |
| GTAGTAGCGCGATTAACGCT+GGG | 0.598173 | 4.2:-93430346 | MS.gene34288:CDS |
| CCACAGCTTCTTCTTCTCAG+TGG | 0.599065 | 4.2:-93428684 | MS.gene34288:CDS |
| GATTACATAATCGTCGGCGG+CGG | 0.599104 | 4.2:-93430593 | MS.gene34288:CDS |
| AATTGCCGTTTACGCTAGTG+TGG | 0.603712 | 4.2:-93428868 | MS.gene34288:CDS |
| TGTGAATGAATCGTATGAAT+GGG | 0.603780 | 4.2:-93430261 | MS.gene34288:CDS |
| GTGGGATTGGGAGAGTGTGG+CGG | 0.612030 | 4.2:+93430550 | None:intergenic |
| TTGTTGTTGTTGAGAAGCGA+AGG | 0.615377 | 4.2:+93430682 | None:intergenic |
| GACGGTGTTCTCAACGCTCG+CGG | 0.619340 | 4.2:-93430383 | MS.gene34288:CDS |
| GGATCCACCTTCGATTCCCA+AGG | 0.620346 | 4.2:-93430107 | MS.gene34288:intron |
| CTCAACCTAATGAACCAAGA+AGG | 0.622356 | 4.2:-93430485 | MS.gene34288:CDS |
| TTCGTCCTGATTTGAAAACG+TGG | 0.623383 | 4.2:-93430220 | MS.gene34288:CDS |
| GAATGTTCTAGCGGAACCGA+AGG | 0.627832 | 4.2:+93428552 | None:intergenic |
| AAAGTGGAGAAGCACTCGAA+CGG | 0.631815 | 4.2:+93428433 | None:intergenic |
| AGATAATCAGAGAAAGGGAA+GGG | 0.633332 | 4.2:-93427811 | MS.gene34288:CDS |
| GCACATCACTTACCTTATGT+AGG | 0.633953 | 4.2:-93428618 | MS.gene34288:CDS |
| CGCGTTCGAGGATGAGAACG+CGG | 0.637388 | 4.2:+93430528 | None:intergenic |
| CCACTGAGAAGAAGAAGCTG+TGG | 0.642184 | 4.2:+93428684 | None:intergenic |
| GTTCGAGGATGAGAACGCGG+TGG | 0.642907 | 4.2:+93430531 | None:intergenic |
| TACTACGATTACATAATCGT+CGG | 0.643267 | 4.2:-93430599 | MS.gene34288:CDS |
| TTCACCTTAGATCATGCTAG+TGG | 0.647368 | 4.2:-93430143 | MS.gene34288:CDS |
| TCAGAAACGAAAGATTGCGC+CGG | 0.654090 | 4.2:+93430407 | None:intergenic |
| ATCAGAGAAAGGGAAGGGAA+GGG | 0.671732 | 4.2:-93427806 | MS.gene34288:CDS |
| GGCGGCTAATGGACAACCGG+CGG | 0.673973 | 4.2:+93430568 | None:intergenic |
| ACTATATGGCATTATCATGG+TGG | 0.674138 | 4.2:-93428102 | MS.gene34288:CDS |
| AGCATCATTAGTGTAGCCTG+AGG | 0.674321 | 4.2:+93427976 | None:intergenic |
| TGTATAAGCGAATGTTCTAG+CGG | 0.674685 | 4.2:+93428543 | None:intergenic |
| TACGATTACATAATCGTCGG+CGG | 0.691385 | 4.2:-93430596 | MS.gene34288:CDS |
| GTTCTCATCCTCGAACGCGG+CGG | 0.694563 | 4.2:-93430524 | MS.gene34288:CDS |
| TAATGGGACCAGGAAATTAG+GGG | 0.700550 | 4.2:-93428268 | MS.gene34288:CDS |
| AGAATCGTGATTCCATTACG+TGG | 0.707949 | 4.2:+93428576 | None:intergenic |
| CGGATGAAAGCAGTTTGCGG+CGG | 0.730813 | 4.2:+93428453 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTATATTATGTATGAAT+TGG | - | chr4.2:93428956-93428975 | MS.gene34288:intron | 15.0% |
| !! | TCATACATAATATACATTCT+GGG | + | chr4.2:93428954-93428973 | None:intergenic | 20.0% |
| !! | TTAATTACACTAAGTTTCTA+CGG | - | chr4.2:93429569-93429588 | MS.gene34288:intron | 20.0% |
| !! | TTCATACATAATATACATTC+TGG | + | chr4.2:93428955-93428974 | None:intergenic | 20.0% |
| !!! | AACTGTTTTTATTCAAACAA+CGG | - | chr4.2:93429435-93429454 | MS.gene34288:intron | 20.0% |
| !!! | AATGTATTGATTAAGAGATT+AGG | - | chr4.2:93429491-93429510 | MS.gene34288:intron | 20.0% |
| !!! | ATGATTTTAAGTTTAGGAAT+TGG | - | chr4.2:93430327-93430346 | MS.gene34288:CDS | 20.0% |
| !!! | ATGTATTGATTAAGAGATTA+GGG | - | chr4.2:93429492-93429511 | MS.gene34288:intron | 20.0% |
| !!! | ATTAAAAAAACAAAAAGTGC+AGG | + | chr4.2:93429554-93429573 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGTGATTATGTTT+TGG | - | chr4.2:93428500-93428519 | MS.gene34288:CDS | 20.0% |
| !!! | CTATGAATGATTTTAAGTTT+AGG | - | chr4.2:93430321-93430340 | MS.gene34288:CDS | 20.0% |
| !!! | TTAAGTTTTGCTTTTTGATT+TGG | - | chr4.2:93428541-93428560 | MS.gene34288:CDS | 20.0% |
| ! | AAAAACTAACAAAATGCTTG+TGG | - | chr4.2:93428985-93429004 | MS.gene34288:intron | 25.0% |
| ! | AAAACTAACAAAATGCTTGT+GGG | - | chr4.2:93428986-93429005 | MS.gene34288:intron | 25.0% |
| ! | AAGTAATTAAACCTGACAAT+AGG | + | chr4.2:93430230-93430249 | None:intergenic | 25.0% |
| ! | AGGTTTAATTACTTTAGCAA+TGG | - | chr4.2:93430236-93430255 | MS.gene34288:CDS | 25.0% |
| ! | ATAAAAAACTGTGTTTACCT+TGG | + | chr4.2:93428461-93428480 | None:intergenic | 25.0% |
| ! | ATGTTGAGAAATGTGTTAAT+GGG | - | chr4.2:93430264-93430283 | MS.gene34288:CDS | 25.0% |
| ! | CAGGTGGAATTAAATATTAA+GGG | + | chr4.2:93429385-93429404 | None:intergenic | 25.0% |
| ! | CATATAATTACAATACAAGC+AGG | + | chr4.2:93429404-93429423 | None:intergenic | 25.0% |
| ! | TAAAAAACTGTGTTTACCTT+GGG | + | chr4.2:93428460-93428479 | None:intergenic | 25.0% |
| ! | TAAGAGTAATAGAAACTGTA+TGG | + | chr4.2:93427818-93427837 | None:intergenic | 25.0% |
| ! | TAATAGAAACTGTATGGAAA+CGG | + | chr4.2:93427812-93427831 | None:intergenic | 25.0% |
| ! | TAATCGTAGTAATCTTCTAA+CGG | + | chr4.2:93427940-93427959 | None:intergenic | 25.0% |
| ! | TATAGAAAATGACCTACATA+AGG | + | chr4.2:93429945-93429964 | None:intergenic | 25.0% |
| ! | TCATTGTTGATGTTCAATTT+AGG | - | chr4.2:93428894-93428913 | MS.gene34288:CDS | 25.0% |
| !! | AATTGATTCTCTTAGAATTG+TGG | - | chr4.2:93430514-93430533 | MS.gene34288:CDS | 25.0% |
| !! | ATAATTCTGTGATTCTGTTT+TGG | - | chr4.2:93428815-93428834 | MS.gene34288:CDS | 25.0% |
| !! | CATGTTTTGTGATTCTATTT+TGG | - | chr4.2:93430697-93430716 | MS.gene34288:CDS | 25.0% |
| !! | GTACATGTTATAAGTTGTTT+TGG | - | chr4.2:93428787-93428806 | MS.gene34288:CDS | 25.0% |
| !! | TGTATTGAACAATTCAGTTT+TGG | - | chr4.2:93430625-93430644 | MS.gene34288:CDS | 25.0% |
| !! | TTTAAGTTTAGGAATTGGTT+GGG | - | chr4.2:93430332-93430351 | MS.gene34288:CDS | 25.0% |
| !!! | TATTTTGATCATTAGCAACT+TGG | + | chr4.2:93429328-93429347 | None:intergenic | 25.0% |
| !!! | TTTTAAGTTTAGGAATTGGT+TGG | - | chr4.2:93430331-93430350 | MS.gene34288:CDS | 25.0% |
| AAATACAGAGCTAAGAAACT+AGG | + | chr4.2:93429358-93429377 | None:intergenic | 30.0% | |
| AATAAGTTGCTTATCCAAAC+AGG | + | chr4.2:93428668-93428687 | None:intergenic | 30.0% | |
| AATACAGAGCTAAGAAACTA+GGG | + | chr4.2:93429357-93429376 | None:intergenic | 30.0% | |
| AATCTAATCAATCAACAGCT+AGG | + | chr4.2:93428641-93428660 | None:intergenic | 30.0% | |
| ACTGAAGATAATCAGAGAAA+GGG | - | chr4.2:93430732-93430751 | MS.gene34288:CDS | 30.0% | |
| AGTACTATATGGCATTATCA+TGG | - | chr4.2:93430443-93430462 | MS.gene34288:CDS | 30.0% | |
| ATAATTACAATACAAGCAGG+TGG | + | chr4.2:93429401-93429420 | None:intergenic | 30.0% | |
| ATCGTTGTTGATGTTCAATT+TGG | - | chr4.2:93428578-93428597 | MS.gene34288:CDS | 30.0% | |
| ATCTAATCAATCAACAGCTA+GGG | + | chr4.2:93428640-93428659 | None:intergenic | 30.0% | |
| ATTGATTAAGAGATTAGGGT+TGG | - | chr4.2:93429496-93429515 | MS.gene34288:intron | 30.0% | |
| CTATATGATAATCCACGTAA+TGG | - | chr4.2:93429960-93429979 | MS.gene34288:intron | 30.0% | |
| GATGTTGAGAAATGTGTTAA+TGG | - | chr4.2:93430263-93430282 | MS.gene34288:CDS | 30.0% | |
| GCAGGTGGAATTAAATATTA+AGG | + | chr4.2:93429386-93429405 | None:intergenic | 30.0% | |
| GCTTATCTATAAGTATGCAT+AGG | - | chr4.2:93428721-93428740 | MS.gene34288:CDS | 30.0% | |
| GGTGGAATTAAATATTAGCA+AGG | + | chr4.2:93429533-93429552 | None:intergenic | 30.0% | |
| GTTCTTTATCGTGATCAAAA+TGG | - | chr4.2:93429774-93429793 | MS.gene34288:intron | 30.0% | |
| TACTACGATTACATAATCGT+CGG | - | chr4.2:93427949-93427968 | MS.gene34288:intron | 30.0% | |
| TAGACCTTATCTTTCTTCAT+GGG | - | chr4.2:93429896-93429915 | MS.gene34288:intron | 30.0% | |
| TCGTTGTTGATGTTCAATTT+GGG | - | chr4.2:93428579-93428598 | MS.gene34288:CDS | 30.0% | |
| TGTGAATGAATCGTATGAAT+GGG | - | chr4.2:93428287-93428306 | MS.gene34288:CDS | 30.0% | |
| TTACGCATGCTTATAGATAA+GGG | + | chr4.2:93429111-93429130 | None:intergenic | 30.0% | |
| TTAGGTTTAATCCTATTGTC+AGG | - | chr4.2:93430216-93430235 | MS.gene34288:CDS | 30.0% | |
| TTGTGAATGAATCGTATGAA+TGG | - | chr4.2:93428286-93428305 | MS.gene34288:CDS | 30.0% | |
| TTTGAACAGAGAATGACTTT+CGG | + | chr4.2:93429473-93429492 | None:intergenic | 30.0% | |
| ! | AAAAAAACAAAAAGTGCAGG+TGG | + | chr4.2:93429551-93429570 | None:intergenic | 30.0% |
| ! | AGCTGTTGATTGATTAGATT+AGG | - | chr4.2:93428641-93428660 | MS.gene34288:CDS | 30.0% |
| ! | GCTGTTGATTGATTAGATTA+GGG | - | chr4.2:93428642-93428661 | MS.gene34288:CDS | 30.0% |
| ! | TGACTAATCTTGGAATTTTC+AGG | - | chr4.2:93429603-93429622 | MS.gene34288:intron | 30.0% |
| !! | AAATGGCTGATTTTTGTAGA+AGG | - | chr4.2:93430414-93430433 | MS.gene34288:CDS | 30.0% |
| !! | AATGTTTTTATAGGCGACAT+TGG | - | chr4.2:93429179-93429198 | MS.gene34288:intron | 30.0% |
| !! | TACGAAATCTGGTCTTAATT+GGG | - | chr4.2:93428254-93428273 | MS.gene34288:CDS | 30.0% |
| !! | TTACGAAATCTGGTCTTAAT+TGG | - | chr4.2:93428253-93428272 | MS.gene34288:CDS | 30.0% |
| !!! | TTAAGTTCTGCTTTTTGATC+TGG | - | chr4.2:93428856-93428875 | MS.gene34288:CDS | 30.0% |
| !!! | TTCTATTTTGGCAGGTATTT+TGG | - | chr4.2:93430709-93430728 | MS.gene34288:CDS | 30.0% |
| !!! | TTTTGGTGTTCTACATGTAT+AGG | - | chr4.2:93428517-93428536 | MS.gene34288:CDS | 30.0% |
| !!! | TTTTGTGATTCTATTTTGGC+AGG | - | chr4.2:93430701-93430720 | MS.gene34288:CDS | 30.0% |
| AAACTGTATGGAAACGGTTA+TGG | + | chr4.2:93427806-93427825 | None:intergenic | 35.0% | |
| AAGATAATCAGAGAAAGGGA+AGG | - | chr4.2:93430736-93430755 | MS.gene34288:CDS | 35.0% | |
| AAGATGAAGAAGATGCTAGA+AGG | + | chr4.2:93429713-93429732 | None:intergenic | 35.0% | |
| AATCGTGATCTTAAGGTCAT+TGG | - | chr4.2:93430491-93430510 | MS.gene34288:CDS | 35.0% | |
| ACCACCAAGTTACCTAAAAA+TGG | - | chr4.2:93427894-93427913 | MS.gene34288:intron | 35.0% | |
| ACTATATGGCATTATCATGG+TGG | - | chr4.2:93430446-93430465 | MS.gene34288:CDS | 35.0% | |
| AGAAACCTTCTTGGTTCATT+AGG | + | chr4.2:93428071-93428090 | None:intergenic | 35.0% | |
| AGACCTTATCTTTCTTCATG+GGG | - | chr4.2:93429897-93429916 | MS.gene34288:intron | 35.0% | |
| AGATAATCAGAGAAAGGGAA+GGG | - | chr4.2:93430737-93430756 | MS.gene34288:CDS | 35.0% | |
| ATTCCCCATGAAGAAAGATA+AGG | + | chr4.2:93429903-93429922 | None:intergenic | 35.0% | |
| CATGAAGAAAGATAAGGTCT+AGG | + | chr4.2:93429897-93429916 | None:intergenic | 35.0% | |
| CATTCGCTTATACAAGTTGT+AGG | - | chr4.2:93430014-93430033 | MS.gene34288:intron | 35.0% | |
| CGTGAATTCTTTACGAAATC+TGG | - | chr4.2:93428243-93428262 | MS.gene34288:CDS | 35.0% | |
| CTAGACCTTATCTTTCTTCA+TGG | - | chr4.2:93429895-93429914 | MS.gene34288:intron | 35.0% | |
| CTTACGCATGCTTATAGATA+AGG | + | chr4.2:93429112-93429131 | None:intergenic | 35.0% | |
| GAAGGACTGTTAGTACTATA+TGG | - | chr4.2:93430432-93430451 | MS.gene34288:CDS | 35.0% | |
| GACTGAAGATAATCAGAGAA+AGG | - | chr4.2:93430731-93430750 | MS.gene34288:CDS | 35.0% | |
| GATTCTCTTAGAATTGTGGA+TGG | - | chr4.2:93430518-93430537 | MS.gene34288:CDS | 35.0% | |
| GCAACAAGTTCTTCTGTTAT+TGG | - | chr4.2:93429750-93429769 | MS.gene34288:intron | 35.0% | |
| GCATAATCCGTTTGATCATT+AGG | + | chr4.2:93430392-93430411 | None:intergenic | 35.0% | |
| GGTTGTTAATCGTGATCTTA+AGG | - | chr4.2:93430484-93430503 | MS.gene34288:CDS | 35.0% | |
| GTTGTAGGAATAACGAATTC+AGG | - | chr4.2:93430029-93430048 | MS.gene34288:intron | 35.0% | |
| TATAAGCTGTTTATCCAGAC+AGG | + | chr4.2:93429065-93429084 | None:intergenic | 35.0% | |
| TCTAATCAATCAACAGCTAG+AGG | + | chr4.2:93428639-93428658 | None:intergenic | 35.0% | |
| TGATTAGATTAGGACCTGTT+TGG | - | chr4.2:93428651-93428670 | MS.gene34288:CDS | 35.0% | |
| TGCTTTGCCTAATGATCAAA+CGG | - | chr4.2:93430382-93430401 | MS.gene34288:CDS | 35.0% | |
| TGTATAAGCGAATGTTCTAG+CGG | + | chr4.2:93430008-93430027 | None:intergenic | 35.0% | |
| TGTTCTACTGTGACTAATCT+TGG | - | chr4.2:93429593-93429612 | MS.gene34288:intron | 35.0% | |
| TTAATGGGACCAGGAAATTA+GGG | - | chr4.2:93430279-93430298 | MS.gene34288:CDS | 35.0% | |
| ! | CAATCTTTCGTTTCTGAAGA+CGG | - | chr4.2:93428147-93428166 | MS.gene34288:CDS | 35.0% |
| ! | GGCATTATAATTCATCGACT+TGG | + | chr4.2:93429307-93429326 | None:intergenic | 35.0% |
| ! | TCTAAGGTGAAACCGTTATA+AGG | + | chr4.2:93428396-93428415 | None:intergenic | 35.0% |
| !! | ACACTGATTTCGAAGATTTC+AGG | - | chr4.2:93430152-93430171 | MS.gene34288:CDS | 35.0% |
| !! | CACGCGATTTTGAAAGATTT+TGG | - | chr4.2:93429807-93429826 | MS.gene34288:intron | 35.0% |
| !! | GAAGAACTTGTTGCAGAATT+TGG | + | chr4.2:93429744-93429763 | None:intergenic | 35.0% |
| !! | GAGTTGGTGTTTGATTAATG+TGG | - | chr4.2:93430657-93430676 | MS.gene34288:CDS | 35.0% |
| !! | GTTTTGGTAGCTATATGAGT+TGG | - | chr4.2:93430641-93430660 | MS.gene34288:CDS | 35.0% |
| !! | TCAAACGGATTATGCTGAAA+TGG | - | chr4.2:93430397-93430416 | MS.gene34288:CDS | 35.0% |
| !! | TTGCGTTTGCAACCATTTTT+AGG | + | chr4.2:93427909-93427928 | None:intergenic | 35.0% |
| !!! | ACCATTTTTAGGTAACTTGG+TGG | + | chr4.2:93427898-93427917 | None:intergenic | 35.0% |
| !!! | GCAACCATTTTTAGGTAACT+TGG | + | chr4.2:93427901-93427920 | None:intergenic | 35.0% |
| !!! | GTGAGGGATTTTAGGTTTAT+TGG | - | chr4.2:93430356-93430375 | MS.gene34288:CDS | 35.0% |
| !!! | TCATTAGGTTGAGTTTTCCA+TGG | + | chr4.2:93428056-93428075 | None:intergenic | 35.0% |
| !!! | TCTGTTTTTAGTGTTTCACC+TGG | - | chr4.2:93430542-93430561 | MS.gene34288:CDS | 35.0% |
| AAGTACATCCCCTAATTTCC+TGG | + | chr4.2:93430291-93430310 | None:intergenic | 40.0% | |
| ACTAACAAAATGCTTGTGGG+TGG | - | chr4.2:93428989-93429008 | MS.gene34288:intron | 40.0% | |
| AGAAATGTGTTAATGGGACC+AGG | - | chr4.2:93430270-93430289 | MS.gene34288:CDS | 40.0% | |
| AGAATCGTGATTCCATTACG+TGG | + | chr4.2:93429975-93429994 | None:intergenic | 40.0% | |
| AGAGATTAGGGTTGGACTTA+TGG | - | chr4.2:93429504-93429523 | MS.gene34288:intron | 40.0% | |
| ATTCAAACAACGGTGAGTTC+TGG | - | chr4.2:93429445-93429464 | MS.gene34288:intron | 40.0% | |
| ATTCTTTCAGCAGGTGCAAT+TGG | - | chr4.2:93429837-93429856 | MS.gene34288:intron | 40.0% | |
| CATGCTAGTGGTACCAAAAT+TGG | - | chr4.2:93428417-93428436 | MS.gene34288:CDS | 40.0% | |
| CTACACTAATGATGCTTGGA+AGG | - | chr4.2:93430579-93430598 | MS.gene34288:CDS | 40.0% | |
| CTCAACCTAATGAACCAAGA+AGG | - | chr4.2:93428063-93428082 | MS.gene34288:CDS | 40.0% | |
| CTTCTTCTTCTCAGTGGAAT+TGG | - | chr4.2:93429870-93429889 | MS.gene34288:intron | 40.0% | |
| GATTTCGAAGATTTCAGGAC+CGG | - | chr4.2:93430157-93430176 | MS.gene34288:CDS | 40.0% | |
| GCACATCACTTACCTTATGT+AGG | - | chr4.2:93429930-93429949 | MS.gene34288:intron | 40.0% | |
| GGAAATTAGGGGATGTACTT+CGG | - | chr4.2:93430291-93430310 | MS.gene34288:CDS | 40.0% | |
| GTGTGTTCAAGAAACCTTCT+TGG | + | chr4.2:93428080-93428099 | None:intergenic | 40.0% | |
| GTTAATGGGACCAGGAAATT+AGG | - | chr4.2:93430278-93430297 | MS.gene34288:CDS | 40.0% | |
| GTTTGATCATTAGGCAAAGC+AGG | + | chr4.2:93430383-93430402 | None:intergenic | 40.0% | |
| TAATGGGACCAGGAAATTAG+GGG | - | chr4.2:93430280-93430299 | MS.gene34288:CDS | 40.0% | |
| TACGATTACATAATCGTCGG+CGG | - | chr4.2:93427952-93427971 | MS.gene34288:intron | 40.0% | |
| TCTTTCCACACTAGCGTAAA+CGG | + | chr4.2:93429688-93429707 | None:intergenic | 40.0% | |
| TGCTTCTCCACTTTATCTGA+CGG | - | chr4.2:93430124-93430143 | MS.gene34288:CDS | 40.0% | |
| TTCAAACAACGGTGAGTTCT+GGG | - | chr4.2:93429446-93429465 | MS.gene34288:intron | 40.0% | |
| TTCACCTTAGATCATGCTAG+TGG | - | chr4.2:93428405-93428424 | MS.gene34288:CDS | 40.0% | |
| ! | GATTGCCACGTTTTCAAATC+AGG | + | chr4.2:93428336-93428355 | None:intergenic | 40.0% |
| ! | TTCGTCCTGATTTGAAAACG+TGG | - | chr4.2:93428328-93428347 | MS.gene34288:CDS | 40.0% |
| ! | TTGTTGTTGTTGAGAAGCGA+AGG | + | chr4.2:93427869-93427888 | None:intergenic | 40.0% |
| !! | ATTCATCGACTTGGCATACT+TGG | + | chr4.2:93429298-93429317 | None:intergenic | 40.0% |
| !! | GTAAACGGCAATTCTGAGAT+TGG | + | chr4.2:93429673-93429692 | None:intergenic | 40.0% |
| !! | TATCATGGTGGATGTGTTGT+TGG | - | chr4.2:93430458-93430477 | MS.gene34288:CDS | 40.0% |
| AATCAGAGAAAGGGAAGGGA+AGG | - | chr4.2:93430741-93430760 | MS.gene34288:CDS | 45.0% | |
| AGCATCATTAGTGTAGCCTG+AGG | + | chr4.2:93430575-93430594 | None:intergenic | 45.0% | |
| ATCAGAGAAAGGGAAGGGAA+GGG | - | chr4.2:93430742-93430761 | MS.gene34288:CDS | 45.0% | |
| CAGGCTACACTAATGATGCT+TGG | - | chr4.2:93430575-93430594 | MS.gene34288:CDS | 45.0% | |
| CGAAGCCAATCGTAGAAAAC+CGG | + | chr4.2:93430189-93430208 | None:intergenic | 45.0% | |
| GAACGGATGAAAGCAGTTTG+CGG | + | chr4.2:93430101-93430120 | None:intergenic | 45.0% | |
| GCTAGTGGTACCAAAATTGG+TGG | - | chr4.2:93428420-93428439 | MS.gene34288:CDS | 45.0% | |
| GGAAGAGGGAAAGAAGATTG+TGG | + | chr4.2:93427848-93427867 | None:intergenic | 45.0% | |
| GGTACCACTAGCATGATCTA+AGG | + | chr4.2:93428412-93428431 | None:intergenic | 45.0% | |
| GGTGAAGTGATTCTTTCAGC+AGG | - | chr4.2:93429828-93429847 | MS.gene34288:intron | 45.0% | |
| GTGTTTACCTTGGGAATCGA+AGG | + | chr4.2:93428451-93428470 | None:intergenic | 45.0% | |
| GTTCCAACCGTCAGATAAAG+TGG | + | chr4.2:93430134-93430153 | None:intergenic | 45.0% | |
| TAAGGTAAGTGATGTGCCAC+TGG | + | chr4.2:93429927-93429946 | None:intergenic | 45.0% | |
| TAGGAATTGGTTGGGTGTGA+GGG | - | chr4.2:93430340-93430359 | MS.gene34288:CDS | 45.0% | |
| TCAAACAACGGTGAGTTCTG+GGG | - | chr4.2:93429447-93429466 | MS.gene34288:intron | 45.0% | |
| TCAGAAACGAAAGATTGCGC+CGG | + | chr4.2:93428144-93428163 | None:intergenic | 45.0% | |
| TCTCCACTTTATCTGACGGT+TGG | - | chr4.2:93430128-93430147 | MS.gene34288:CDS | 45.0% | |
| TGATTAGATTAGGGCCTGTC+TGG | - | chr4.2:93429048-93429067 | MS.gene34288:intron | 45.0% | |
| TGGAATCACGATTCTGCCTT+CGG | - | chr4.2:93429980-93429999 | MS.gene34288:intron | 45.0% | |
| TGTTGAGAAGCGAAGGAAGA+GGG | + | chr4.2:93427862-93427881 | None:intergenic | 45.0% | |
| TTAGGAATTGGTTGGGTGTG+AGG | - | chr4.2:93430339-93430358 | MS.gene34288:CDS | 45.0% | |
| TTCACCTGGAACTAATCCTC+AGG | - | chr4.2:93430556-93430575 | MS.gene34288:CDS | 45.0% | |
| TTCTTCATGGGGAATTCCAG+TGG | - | chr4.2:93429908-93429927 | MS.gene34288:intron | 45.0% | |
| TTGTTGAGAAGCGAAGGAAG+AGG | + | chr4.2:93427863-93427882 | None:intergenic | 45.0% | |
| TTTACCTTGGGAATCGAAGG+TGG | + | chr4.2:93428448-93428467 | None:intergenic | 45.0% | |
| ! | AATTGCCGTTTACGCTAGTG+TGG | - | chr4.2:93429680-93429699 | MS.gene34288:intron | 45.0% |
| ! | GAAGGTGGATCCACCAATTT+TGG | + | chr4.2:93428433-93428452 | None:intergenic | 45.0% |
| ! | TGGTGGATGTGTTGTTGGTA+GGG | - | chr4.2:93430463-93430482 | MS.gene34288:CDS | 45.0% |
| !! | AAAGTGGAGAAGCACTCGAA+CGG | + | chr4.2:93430118-93430137 | None:intergenic | 45.0% |
| !! | ATGGTGGATGTGTTGTTGGT+AGG | - | chr4.2:93430462-93430481 | MS.gene34288:CDS | 45.0% |
| !! | GATTGGCTTCGACTGATGTT+AGG | - | chr4.2:93430198-93430217 | MS.gene34288:CDS | 45.0% |
| !! | GCTGGTGTTGCTCCTTATAA+CGG | - | chr4.2:93428381-93428400 | MS.gene34288:CDS | 45.0% |
| !!! | TTCTGCCGGTTTTCTACGAT+TGG | - | chr4.2:93430181-93430200 | MS.gene34288:CDS | 45.0% |
| !!! | TTTTTATAAAATGTTTTTAT+AGG | - | chr4.2:93429170-93429189 | MS.gene34288:intron | 5.0% |
| CCACAGCTTCTTCTTCTCAG+TGG | - | chr4.2:93429864-93429883 | MS.gene34288:intron | 50.0% | |
| CCACTGAGAAGAAGAAGCTG+TGG | + | chr4.2:93429867-93429886 | None:intergenic | 50.0% | |
| CGCTACTACCACCAAGAACA+CGG | + | chr4.2:93428191-93428210 | None:intergenic | 50.0% | |
| CGTAGAAAACCGGCAGAAAC+CGG | + | chr4.2:93430179-93430198 | None:intergenic | 50.0% | |
| CGTGATGGTCTTCTTGAAGC+TGG | - | chr4.2:93428363-93428382 | MS.gene34288:CDS | 50.0% | |
| GAATGTTCTAGCGGAACCGA+AGG | + | chr4.2:93429999-93430018 | None:intergenic | 50.0% | |
| GATTACATAATCGTCGGCGG+CGG | - | chr4.2:93427955-93427974 | MS.gene34288:intron | 50.0% | |
| GTAGTAGCGCGATTAACGCT+GGG | - | chr4.2:93428202-93428221 | MS.gene34288:CDS | 50.0% | |
| GTCGTTGTTGGCGTTGTTTG+CGG | + | chr4.2:93428115-93428134 | None:intergenic | 50.0% | |
| GTTTGCGGCGGTGACAAAAA+TGG | + | chr4.2:93430086-93430105 | None:intergenic | 50.0% | |
| TGGCAATCTGCTGTTCGTGA+TGG | - | chr4.2:93428348-93428367 | MS.gene34288:CDS | 50.0% | |
| ! | ATTTCAGGACCGGTTTCTGC+CGG | - | chr4.2:93430167-93430186 | MS.gene34288:CDS | 50.0% |
| ! | GGTTGGGTGTGAGGGATTTT+AGG | - | chr4.2:93430348-93430367 | MS.gene34288:CDS | 50.0% |
| !! | GTAGCCTGAGGATTAGTTCC+AGG | + | chr4.2:93430563-93430582 | None:intergenic | 50.0% |
| CGCCAACAACGACGATTCAC+CGG | - | chr4.2:93428122-93428141 | MS.gene34288:CDS | 55.0% | |
| CGGATGAAAGCAGTTTGCGG+CGG | + | chr4.2:93430098-93430117 | None:intergenic | 55.0% | |
| GATGAGAACGCGGTGGGATT+GGG | + | chr4.2:93428013-93428032 | None:intergenic | 55.0% | |
| GGATCCACCTTCGATTCCCA+AGG | - | chr4.2:93428441-93428460 | MS.gene34288:CDS | 55.0% | |
| GGTAGTAGCGCGATTAACGC+TGG | - | chr4.2:93428201-93428220 | MS.gene34288:CDS | 55.0% | |
| TTCGAGGATGAGAACGCGGT+GGG | + | chr4.2:93428019-93428038 | None:intergenic | 55.0% | |
| ! | TGTGGCGGCTAATGGACAAC+CGG | + | chr4.2:93427986-93428005 | None:intergenic | 55.0% |
| CGCCGGTGAATCGTCGTTGT+TGG | + | chr4.2:93428127-93428146 | None:intergenic | 60.0% | |
| CGCGTTCGAGGATGAGAACG+CGG | + | chr4.2:93428023-93428042 | None:intergenic | 60.0% | |
| CGCGTTCTCATCCTCGAACG+CGG | - | chr4.2:93428021-93428040 | MS.gene34288:CDS | 60.0% | |
| GACGGTGTTCTCAACGCTCG+CGG | - | chr4.2:93428165-93428184 | MS.gene34288:CDS | 60.0% | |
| GGATGAGAACGCGGTGGGAT+TGG | + | chr4.2:93428014-93428033 | None:intergenic | 60.0% | |
| GTTCGAGGATGAGAACGCGG+TGG | + | chr4.2:93428020-93428039 | None:intergenic | 60.0% | |
| GTTCTCATCCTCGAACGCGG+CGG | - | chr4.2:93428024-93428043 | MS.gene34288:CDS | 60.0% | |
| ! | GTGGGATTGGGAGAGTGTGG+CGG | + | chr4.2:93428001-93428020 | None:intergenic | 60.0% |
| ! | TGGGAGAGTGTGGCGGCTAA+TGG | + | chr4.2:93427994-93428013 | None:intergenic | 60.0% |
| AACGCTCGCGGCCGTGTTCT+TGG | - | chr4.2:93428177-93428196 | MS.gene34288:CDS | 65.0% | |
| GAACGCGGCGGAGTCATCCA+TGG | - | chr4.2:93428036-93428055 | MS.gene34288:CDS | 65.0% | |
| GCGGTGGGATTGGGAGAGTG+TGG | + | chr4.2:93428004-93428023 | None:intergenic | 65.0% | |
| ! | GGCGGCTAATGGACAACCGG+CGG | + | chr4.2:93427983-93428002 | None:intergenic | 65.0% |
| GCTCGCGGCCGTGTTCTTGG+TGG | - | chr4.2:93428180-93428199 | MS.gene34288:CDS | 70.0% | |
| GGATGACTCCGCCGCGTTCG+AGG | + | chr4.2:93428035-93428054 | None:intergenic | 70.0% | |
| ATCGTCGGCGGCGGAACCGC+CGG | - | chr4.2:93427964-93427983 | MS.gene34288:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 93427790 | 93430780 | 93427790 | ID=MS.gene34288 |
| chr4.2 | mRNA | 93427790 | 93430780 | 93427790 | ID=MS.gene34288.t1;Parent=MS.gene34288 |
| chr4.2 | exon | 93430108 | 93430780 | 93430108 | ID=MS.gene34288.t1.exon1;Parent=MS.gene34288.t1 |
| chr4.2 | CDS | 93430108 | 93430780 | 93430108 | ID=cds.MS.gene34288.t1;Parent=MS.gene34288.t1 |
| chr4.2 | exon | 93427970 | 93428945 | 93427970 | ID=MS.gene34288.t1.exon2;Parent=MS.gene34288.t1 |
| chr4.2 | CDS | 93427970 | 93428945 | 93427970 | ID=cds.MS.gene34288.t1;Parent=MS.gene34288.t1 |
| chr4.2 | exon | 93427790 | 93427847 | 93427790 | ID=MS.gene34288.t1.exon3;Parent=MS.gene34288.t1 |
| chr4.2 | CDS | 93427790 | 93427847 | 93427790 | ID=cds.MS.gene34288.t1;Parent=MS.gene34288.t1 |
| Gene Sequence |
| Protein sequence |
