Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76298.t1 | XP_013470187.1 | 96.9 | 900 | 27 | 1 | 47 | 945 | 26 | 925 | 0.00E+00 | 1836.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76298.t1 | Q9S7Y7 | 75.1 | 890 | 212 | 3 | 58 | 944 | 31 | 913 | 0.0e+00 | 1448.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76298.t1 | A0A072W1R5 | 96.9 | 900 | 27 | 1 | 47 | 945 | 26 | 925 | 0.0e+00 | 1836.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070893 | MS.gene76298 | PPI |
| MS.gene069133 | MS.gene76298 | PPI |
| MS.gene76298 | MS.gene02726 | PPI |
| MS.gene76298 | MS.gene027805 | PPI |
| MS.gene00023 | MS.gene76298 | PPI |
| MS.gene00027 | MS.gene76298 | PPI |
| MS.gene047991 | MS.gene76298 | PPI |
| MS.gene76298 | MS.gene068597 | PPI |
| MS.gene76298 | MS.gene047493 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76298.t1 | MTR_1g110980 | 96.889 | 900 | 27 | 1 | 47 | 945 | 26 | 925 | 0.0 | 1818 |
| MS.gene76298.t1 | MTR_1g111000 | 83.497 | 915 | 134 | 5 | 48 | 945 | 24 | 938 | 0.0 | 1574 |
| MS.gene76298.t1 | MTR_5g057990 | 81.006 | 895 | 165 | 2 | 55 | 944 | 32 | 926 | 0.0 | 1560 |
| MS.gene76298.t1 | MTR_3g096870 | 27.967 | 851 | 483 | 25 | 40 | 829 | 27 | 808 | 1.89e-82 | 286 |
| MS.gene76298.t1 | MTR_5g026610 | 30.672 | 714 | 406 | 20 | 201 | 903 | 81 | 716 | 2.01e-80 | 280 |
| MS.gene76298.t1 | MTR_5g026610 | 30.672 | 714 | 406 | 20 | 201 | 903 | 144 | 779 | 6.27e-80 | 280 |
| MS.gene76298.t1 | MTR_5g026610 | 30.672 | 714 | 406 | 20 | 201 | 903 | 81 | 716 | 8.41e-80 | 280 |
| MS.gene76298.t1 | MTR_5g026610 | 30.672 | 714 | 406 | 20 | 201 | 903 | 144 | 779 | 9.86e-80 | 281 |
| MS.gene76298.t1 | MTR_5g026610 | 30.672 | 714 | 406 | 20 | 201 | 903 | 184 | 819 | 4.81e-79 | 279 |
| MS.gene76298.t1 | MTR_5g026610 | 31.319 | 546 | 304 | 14 | 362 | 903 | 2 | 480 | 5.35e-63 | 228 |
| MS.gene76298.t1 | MTR_6g014900 | 62.264 | 53 | 20 | 0 | 660 | 712 | 80 | 132 | 1.78e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76298.t1 | AT1G68560 | 75.056 | 890 | 212 | 3 | 58 | 944 | 31 | 913 | 0.0 | 1438 |
| MS.gene76298.t1 | AT3G45940 | 66.592 | 898 | 229 | 7 | 55 | 945 | 21 | 854 | 0.0 | 1238 |
| MS.gene76298.t1 | AT5G11720 | 46.162 | 912 | 448 | 13 | 44 | 943 | 21 | 901 | 0.0 | 832 |
| MS.gene76298.t1 | AT5G63840 | 29.129 | 769 | 436 | 23 | 171 | 904 | 189 | 883 | 1.91e-84 | 291 |
| MS.gene76298.t1 | AT5G63840 | 29.129 | 769 | 436 | 23 | 171 | 904 | 216 | 910 | 4.01e-84 | 291 |
| MS.gene76298.t1 | AT3G23640 | 33.007 | 612 | 314 | 19 | 244 | 841 | 119 | 648 | 9.63e-84 | 291 |
| MS.gene76298.t1 | AT3G23640 | 33.007 | 612 | 314 | 19 | 244 | 841 | 119 | 648 | 9.63e-84 | 291 |
| MS.gene76298.t1 | AT3G23640 | 33.007 | 612 | 314 | 19 | 244 | 841 | 188 | 717 | 1.68e-83 | 291 |
Find 264 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATGCTCATAGTATTTA+TGG | 0.119026 | 1.1:-78338104 | MS.gene76298:CDS |
| TATAACATCAAGTGGAATTT+TGG | 0.152772 | 1.1:+78338697 | None:intergenic |
| CCATTTCCAAGCTTCATTTC+TGG | 0.177210 | 1.1:+78337255 | None:intergenic |
| TCCAGAAAGTTTAAAAGTTT+TGG | 0.188609 | 1.1:+78338608 | None:intergenic |
| ATATCCACTATGCTGAATTT+TGG | 0.203228 | 1.1:-78337927 | MS.gene76298:CDS |
| CCAATGCCTTATTGGGCTTT+TGG | 0.214511 | 1.1:-78339575 | MS.gene76298:intron |
| GACCAGCTCCAATGCCTTAT+TGG | 0.219272 | 1.1:-78339583 | MS.gene76298:CDS |
| TTGTCCCAGTTGATGGCTTA+TGG | 0.228309 | 1.1:-78338358 | MS.gene76298:CDS |
| CATGAACTTGTCCCAGTTGA+TGG | 0.228489 | 1.1:-78338365 | MS.gene76298:CDS |
| AAATTCCACTTGATGTTATA+TGG | 0.240384 | 1.1:-78338694 | MS.gene76298:CDS |
| CATTTAGCTTTGCAGTTAAA+AGG | 0.247218 | 1.1:-78340045 | MS.gene76298:CDS |
| ATAAATGTGTTAGGATTAAA+TGG | 0.248372 | 1.1:-78337120 | MS.gene76298:CDS |
| AATCTCAACACTGATCTATA+TGG | 0.257614 | 1.1:-78339812 | MS.gene76298:CDS |
| GGTCCAGACATTCCCCTTCT+AGG | 0.259025 | 1.1:-78340355 | MS.gene76298:CDS |
| TAATATGAGCCTCATAGTTT+AGG | 0.266079 | 1.1:+78337679 | None:intergenic |
| TAGTAGAAATTTCCAAATAT+TGG | 0.282009 | 1.1:+78339948 | None:intergenic |
| TTTGGATGTGGGTAGTTAAC+TGG | 0.282850 | 1.1:+78338626 | None:intergenic |
| GGCAAGTTTGCTTTGGATAA+AGG | 0.286766 | 1.1:-78337159 | MS.gene76298:CDS |
| TTCAAGGGCTTCAAGGAAAA+AGG | 0.287612 | 1.1:-78338049 | MS.gene76298:CDS |
| TCAATCCTAAAACAGTTTCT+TGG | 0.296518 | 1.1:-78338412 | MS.gene76298:CDS |
| CCCTACAAAATTAATGCTTC+AGG | 0.297372 | 1.1:-78338194 | MS.gene76298:CDS |
| CGCTCTACTTATGTTGGTTC+TGG | 0.298045 | 1.1:-78338011 | MS.gene76298:CDS |
| ACCATACAGAGAAGCATCTT+TGG | 0.303967 | 1.1:+78339919 | None:intergenic |
| CAATGCATTTCTTGCTGATT+CGG | 0.305619 | 1.1:+78337737 | None:intergenic |
| AGTCCACTATAATGGCATTT+TGG | 0.307844 | 1.1:-78338129 | MS.gene76298:CDS |
| CCACATGCAAGGGTGCATTA+AGG | 0.309564 | 1.1:+78337439 | None:intergenic |
| TAGATCAGTGTTGAGATTAA+TGG | 0.310952 | 1.1:+78339817 | None:intergenic |
| ACCAGCTCCAATGCCTTATT+GGG | 0.314645 | 1.1:-78339582 | MS.gene76298:CDS |
| CCCAAAGATGCTTCTCTGTA+TGG | 0.323700 | 1.1:-78339920 | MS.gene76298:CDS |
| GTAGAGCGGGTCAAAATAAA+AGG | 0.331081 | 1.1:+78338026 | None:intergenic |
| GACCCTAATGGTGCTATTAC+AGG | 0.332574 | 1.1:-78340412 | MS.gene76298:CDS |
| GGCTGCTCCCAAGTAAGAAT+TGG | 0.339178 | 1.1:+78337586 | None:intergenic |
| CTATCAACTTTCACATTTGT+TGG | 0.339792 | 1.1:+78337060 | None:intergenic |
| TACGCGTGACTTTGGACTTT+AGG | 0.343935 | 1.1:+78340679 | None:intergenic |
| CCAAAGCAAACTTGCCCTCT+TGG | 0.345644 | 1.1:+78337166 | None:intergenic |
| CTAAGCACCCAATTCTTACT+TGG | 0.347287 | 1.1:-78337594 | MS.gene76298:CDS |
| AGTCCTGTAATAGCACCATT+AGG | 0.351657 | 1.1:+78340409 | None:intergenic |
| AACCATTCTTGGCTCAAGTT+TGG | 0.355816 | 1.1:-78338463 | MS.gene76298:CDS |
| ATTGACACAATAAATGTGTT+AGG | 0.356484 | 1.1:-78337129 | MS.gene76298:CDS |
| TTTCTAAGATCCATGTATAC+AGG | 0.357210 | 1.1:+78339782 | None:intergenic |
| AGATGCTTCTCTGTATGGTT+TGG | 0.363311 | 1.1:-78339915 | MS.gene76298:CDS |
| ACATGAGGGTGAACCATTCT+TGG | 0.363472 | 1.1:-78338474 | MS.gene76298:CDS |
| AATATGAGCCTCATAGTTTA+GGG | 0.368306 | 1.1:+78337680 | None:intergenic |
| CATTACCTTACGCGTGACTT+TGG | 0.369962 | 1.1:+78340671 | None:intergenic |
| TACTCATGATCCCATCTTCC+AGG | 0.371397 | 1.1:+78336933 | None:intergenic |
| CCAAGAGGGCAAGTTTGCTT+TGG | 0.372848 | 1.1:-78337166 | MS.gene76298:CDS |
| CCTTTGGTATACACCATAAC+TGG | 0.373757 | 1.1:+78338523 | None:intergenic |
| TACAAAGTATAAGGATCATT+TGG | 0.373848 | 1.1:+78339857 | None:intergenic |
| GATCAGTACACTTCCTTCAT+TGG | 0.374148 | 1.1:-78339608 | MS.gene76298:CDS |
| ACCTTGTTGCATTGGTAGAA+TGG | 0.383857 | 1.1:+78337392 | None:intergenic |
| ACAAGTGCAGTCCACTATAA+TGG | 0.387331 | 1.1:-78338137 | MS.gene76298:CDS |
| ACTTGACATAGAAGCCTAGA+AGG | 0.388368 | 1.1:+78340341 | None:intergenic |
| TTAAATGGAAATGGAGCAAT+AGG | 0.388884 | 1.1:-78337105 | MS.gene76298:CDS |
| TACAGGACTTCTACAAGTTA+AGG | 0.389135 | 1.1:-78340395 | MS.gene76298:CDS |
| TCAATCCATAAGCCATCAAC+TGG | 0.391311 | 1.1:+78338353 | None:intergenic |
| GATGCTTCTCTGTATGGTTT+GGG | 0.391963 | 1.1:-78339914 | MS.gene76298:CDS |
| AAGAAGGAACTGTGAAAGTT+TGG | 0.394722 | 1.1:-78337197 | MS.gene76298:CDS |
| CTCAGACACATTTGGTCCAC+TGG | 0.395057 | 1.1:-78339981 | MS.gene76298:CDS |
| CTTTGAAGCAGAACATTAAG+AGG | 0.405095 | 1.1:-78340138 | MS.gene76298:CDS |
| TCAGGATTACAAGCTCCTAT+AGG | 0.405226 | 1.1:-78338176 | MS.gene76298:CDS |
| TCTCCTTCATTTGCACCTGC+TGG | 0.405632 | 1.1:+78337315 | None:intergenic |
| CAGCCAGGTCCTGTTCCACT+TGG | 0.406187 | 1.1:+78338269 | None:intergenic |
| ATAGGTACCATTGAGATAGA+TGG | 0.407246 | 1.1:-78337087 | MS.gene76298:CDS |
| AAGAAAAGAGGCCTAGCAAT+TGG | 0.409525 | 1.1:+78337648 | None:intergenic |
| TCAGTGGTATACAAAGTATA+AGG | 0.411774 | 1.1:+78339848 | None:intergenic |
| TGTGTCTGAGTCATTAGAAT+TGG | 0.412803 | 1.1:+78339994 | None:intergenic |
| GTTCATCATCATCAATGAAT+AGG | 0.413581 | 1.1:+78337280 | None:intergenic |
| CCAGAAATGAAGCTTGGAAA+TGG | 0.414689 | 1.1:-78337255 | MS.gene76298:CDS |
| AAAGGTGGTGGTTGCTCCCT+AGG | 0.416767 | 1.1:+78340157 | None:intergenic |
| AACTATGAGGCTCATATTAG+TGG | 0.419212 | 1.1:-78337675 | MS.gene76298:CDS |
| TCAAACCATTGCAACTCATA+AGG | 0.419266 | 1.1:-78338075 | MS.gene76298:CDS |
| GTGTTAGGATTAAATGGAAA+TGG | 0.422067 | 1.1:-78337114 | MS.gene76298:CDS |
| ATCATACCAAAAGCCCAATA+AGG | 0.422925 | 1.1:+78339569 | None:intergenic |
| TCTTTGACATACAAGATTGT+TGG | 0.426174 | 1.1:-78339683 | MS.gene76298:CDS |
| GCATTGGACAGGTGACAATC+AGG | 0.426225 | 1.1:-78337976 | MS.gene76298:CDS |
| CAAGTCATTATTTCAAAAGA+TGG | 0.426568 | 1.1:-78337474 | MS.gene76298:CDS |
| CACATGCAAGGGTGCATTAA+GGG | 0.430928 | 1.1:+78337440 | None:intergenic |
| GAAGCTTCAAATTTCTGCTC+TGG | 0.432143 | 1.1:-78338323 | MS.gene76298:CDS |
| CAAAGTCACGCGTAAGGTAA+TGG | 0.433065 | 1.1:-78340670 | MS.gene76298:CDS |
| AAGGCCCTTCAAGGGCTTCA+AGG | 0.434633 | 1.1:-78338056 | MS.gene76298:CDS |
| AATAAACTATACCATGTTCC+AGG | 0.435029 | 1.1:+78337507 | None:intergenic |
| AAGCCTAGAAGGGGAATGTC+TGG | 0.435204 | 1.1:+78340352 | None:intergenic |
| AGAAAAGAGGCCTAGCAATT+GGG | 0.436988 | 1.1:+78337649 | None:intergenic |
| GCAACTCATAAGGCCCTTCA+AGG | 0.440407 | 1.1:-78338065 | MS.gene76298:CDS |
| AAGGAGAAGAATGATATCTA+TGG | 0.442211 | 1.1:-78340376 | MS.gene76298:CDS |
| CATACTGATGGTTGGAATGA+AGG | 0.445016 | 1.1:-78336992 | MS.gene76298:CDS |
| CAAGAACAGGAGAAATCATT+AGG | 0.446334 | 1.1:+78337565 | None:intergenic |
| ATAGTTTAGGGTGTACAGAT+AGG | 0.447057 | 1.1:+78337692 | None:intergenic |
| GTCCTGTAATAGCACCATTA+GGG | 0.448389 | 1.1:+78340410 | None:intergenic |
| CTCTTAATGTTCTGCTTCAA+AGG | 0.448498 | 1.1:+78340139 | None:intergenic |
| ATCATTCCACCTTGTTGCAT+TGG | 0.448757 | 1.1:+78337384 | None:intergenic |
| AAGGTGTGCCCAAGTGGAAC+AGG | 0.448760 | 1.1:-78338278 | MS.gene76298:CDS |
| CCATACAGAGAAGCATCTTT+GGG | 0.449022 | 1.1:+78339920 | None:intergenic |
| ATTCCAAAATGCCATTATAG+TGG | 0.449801 | 1.1:+78338126 | None:intergenic |
| TCTAATGACTCAGACACATT+TGG | 0.450096 | 1.1:-78339989 | MS.gene76298:CDS |
| TGGTTTCCCATCTATCTCAA+TGG | 0.452061 | 1.1:+78337080 | None:intergenic |
| CATCATTAGCCATACCCCTT+TGG | 0.452655 | 1.1:+78338507 | None:intergenic |
| CAAAGCTCTTCAGTGGGTTG+TGG | 0.452865 | 1.1:+78337858 | None:intergenic |
| GTTTGCTTTGGATAAAGGTT+GGG | 0.454749 | 1.1:-78337154 | MS.gene76298:CDS |
| CATCAACTGGGACAAGTTCA+TGG | 0.455884 | 1.1:+78338366 | None:intergenic |
| TTTGCATGGTCCCTTGAGAA+TGG | 0.461057 | 1.1:+78337804 | None:intergenic |
| GAATCAGCAAGAAATGCATT+GGG | 0.462602 | 1.1:-78337735 | MS.gene76298:CDS |
| CAAGAAATGCATTGGGGATG+AGG | 0.468281 | 1.1:-78337728 | MS.gene76298:CDS |
| ACTTGCATGAAAGTCAATAT+AGG | 0.474923 | 1.1:+78337224 | None:intergenic |
| ATGTTCTGCTTCAAAGGTGG+TGG | 0.476297 | 1.1:+78340145 | None:intergenic |
| TCTATTCAAGATGACCCTAA+TGG | 0.477917 | 1.1:-78340424 | MS.gene76298:CDS |
| CAGGTGACAATCAGGGTACA+TGG | 0.478047 | 1.1:-78337968 | MS.gene76298:CDS |
| ATTGCTGTTAACTCCAGTTA+TGG | 0.478467 | 1.1:-78338536 | MS.gene76298:CDS |
| CTATAACATTCAATATAAGT+TGG | 0.479207 | 1.1:+78337618 | None:intergenic |
| TCCCTAGGCAAAAGATCATA+AGG | 0.479850 | 1.1:+78340172 | None:intergenic |
| TTGACCCGCTCTACTTATGT+TGG | 0.486226 | 1.1:-78338017 | MS.gene76298:CDS |
| GTGCTTTCTATCCATTCTCA+AGG | 0.488078 | 1.1:-78337815 | MS.gene76298:CDS |
| ATCTCAACACTGATCTATAT+GGG | 0.488362 | 1.1:-78339811 | MS.gene76298:CDS |
| ATTTCTCCTGTTCTTGAGCA+AGG | 0.488456 | 1.1:-78337558 | MS.gene76298:CDS |
| TGCCCAAGTGGAACAGGACC+TGG | 0.489495 | 1.1:-78338272 | MS.gene76298:CDS |
| CTGATGCAAAGAACAAAAGA+TGG | 0.489866 | 1.1:-78340201 | MS.gene76298:CDS |
| TATAACATTCAATATAAGTT+GGG | 0.490424 | 1.1:+78337619 | None:intergenic |
| CGAATCAGCAAGAAATGCAT+TGG | 0.490570 | 1.1:-78337736 | MS.gene76298:CDS |
| CAGTTATGGTGTATACCAAA+GGG | 0.490868 | 1.1:-78338522 | MS.gene76298:CDS |
| CAAATGAAGGAGAGGCTAAA+GGG | 0.490889 | 1.1:-78337305 | MS.gene76298:CDS |
| CTCACACCACAGGGATAGAA+TGG | 0.492420 | 1.1:-78340719 | MS.gene76298:CDS |
| CCACTGAAGAGCTTTGCAAT+AGG | 0.494841 | 1.1:-78337851 | MS.gene76298:CDS |
| TACTGATCAACAACACTAAG+AGG | 0.496797 | 1.1:+78339623 | None:intergenic |
| GCTGCTCCCAAGTAAGAATT+GGG | 0.498928 | 1.1:+78337587 | None:intergenic |
| TACATGGATCTTAGAAATGA+AGG | 0.499719 | 1.1:-78339776 | MS.gene76298:CDS |
| AAATATGCAGCGCATTGGAC+AGG | 0.500413 | 1.1:-78337987 | MS.gene76298:CDS |
| AGTTTGCTTTGGATAAAGGT+TGG | 0.501919 | 1.1:-78337155 | MS.gene76298:CDS |
| GTGGGTAGTTAACTGGATTG+AGG | 0.503347 | 1.1:+78338633 | None:intergenic |
| CAACATCTTCTACAACAGAT+AGG | 0.504167 | 1.1:+78338738 | None:intergenic |
| TGCAATAGGTGGATTGAAGT+TGG | 0.505532 | 1.1:-78337837 | MS.gene76298:CDS |
| TGGGTCTCACCCTGTATACA+TGG | 0.507089 | 1.1:-78339792 | MS.gene76298:CDS |
| TACATACACGGACGAGGAGA+TGG | 0.510137 | 1.1:-78337024 | MS.gene76298:CDS |
| GCCCAATAAGGCATTGGAGC+TGG | 0.510842 | 1.1:+78339581 | None:intergenic |
| TTGACATACAAGATTGTTGG+AGG | 0.510850 | 1.1:-78339680 | MS.gene76298:CDS |
| ATACTGATGGTTGGAATGAA+GGG | 0.512323 | 1.1:-78336991 | MS.gene76298:CDS |
| GCGTGACTTTGGACTTTAGG+AGG | 0.515965 | 1.1:+78340682 | None:intergenic |
| GAACTTCCAGAAATGAAGCT+TGG | 0.516701 | 1.1:-78337261 | MS.gene76298:CDS |
| ATTCTTGGCTCAAGTTTGGC+CGG | 0.516954 | 1.1:-78338459 | MS.gene76298:CDS |
| CGGACGAGGAGATGGAGAAA+AGG | 0.517075 | 1.1:-78337016 | MS.gene76298:CDS |
| ATATTTGGGGTGCCAATGGT+TGG | 0.517574 | 1.1:-78337903 | MS.gene76298:CDS |
| TTCTATCCCTGTGGTGTGAG+TGG | 0.518278 | 1.1:+78340722 | None:intergenic |
| AACAAAACACCATGTGCATT+AGG | 0.518720 | 1.1:+78339746 | None:intergenic |
| TCCTAAAACAGTTTCTTGGT+GGG | 0.519260 | 1.1:-78338408 | MS.gene76298:CDS |
| ATCCTAAAACAGTTTCTTGG+TGG | 0.519347 | 1.1:-78338409 | MS.gene76298:CDS |
| TGGGTAGTTAACTGGATTGA+GGG | 0.520183 | 1.1:+78338634 | None:intergenic |
| CACTCTTTCCACCTGGAACA+TGG | 0.523724 | 1.1:-78337518 | MS.gene76298:CDS |
| GACATACAAGATTGTTGGAG+GGG | 0.524038 | 1.1:-78339678 | MS.gene76298:CDS |
| AACAATCTTGTATGTCAAAG+AGG | 0.527915 | 1.1:+78339685 | None:intergenic |
| TGGAGCTGGTCTACCAATGA+AGG | 0.528059 | 1.1:+78339595 | None:intergenic |
| TATTCCAAAATTCAGCATAG+TGG | 0.528216 | 1.1:+78337923 | None:intergenic |
| CATCTTGAATAGATATCAAA+CGG | 0.529181 | 1.1:+78340434 | None:intergenic |
| TGGAATATTTGGGGTGCCAA+TGG | 0.529991 | 1.1:-78337907 | MS.gene76298:CDS |
| CTGAAGAGCTTTGCAATAGG+TGG | 0.530495 | 1.1:-78337848 | MS.gene76298:CDS |
| TCAGGAAAGTACACTGCTCC+CGG | 0.530887 | 1.1:+78338440 | None:intergenic |
| GGTGGGTCCACTCACACCAC+AGG | 0.531272 | 1.1:-78340729 | MS.gene76298:CDS |
| TAGGTACCATTGAGATAGAT+GGG | 0.534381 | 1.1:-78337086 | MS.gene76298:CDS |
| TACATTGTGATAATTGATCC+TGG | 0.535776 | 1.1:-78338560 | MS.gene76298:CDS |
| AAGGGCCTTATGAGTTGCAA+TGG | 0.535965 | 1.1:+78338070 | None:intergenic |
| TGCTTTCTATCCATTCTCAA+GGG | 0.536525 | 1.1:-78337814 | MS.gene76298:CDS |
| TTCTTGGCTCAAGTTTGGCC+GGG | 0.536828 | 1.1:-78338458 | MS.gene76298:CDS |
| GCAAATGAAGGAGAGGCTAA+AGG | 0.537400 | 1.1:-78337306 | MS.gene76298:CDS |
| CCAAAAGCCCAATAAGGCAT+TGG | 0.538141 | 1.1:+78339575 | None:intergenic |
| TGGTGTATACCAAAGGGGTA+TGG | 0.538274 | 1.1:-78338516 | MS.gene76298:CDS |
| GGTAAGTGCACAATTCCTAC+AGG | 0.539062 | 1.1:-78338302 | MS.gene76298:CDS |
| TCATTCCATATAACATCAAG+TGG | 0.540109 | 1.1:+78338689 | None:intergenic |
| TTTGCTATGACCTGGAAGAT+GGG | 0.540274 | 1.1:-78336943 | MS.gene76298:CDS |
| TAGGATTCCACCAATGCAGA+TGG | 0.540727 | 1.1:-78338772 | MS.gene76298:CDS |
| GTTGTTGAATAGCAATGGAA+TGG | 0.541632 | 1.1:-78339726 | MS.gene76298:CDS |
| CTCATTGTGACATTTCCAGC+AGG | 0.542665 | 1.1:-78337330 | MS.gene76298:CDS |
| ATGGTTGGTTCAGATATATG+TGG | 0.546708 | 1.1:-78337888 | MS.gene76298:CDS |
| GAAAAGGACATACTGATGGT+TGG | 0.547292 | 1.1:-78337000 | MS.gene76298:CDS |
| GGCCAAACTTGAGCCAAGAA+TGG | 0.547868 | 1.1:+78338461 | None:intergenic |
| TTTCTCCTGTTCTTGAGCAA+GGG | 0.549514 | 1.1:-78337557 | MS.gene76298:CDS |
| AGCCAGGTCCTGTTCCACTT+GGG | 0.551187 | 1.1:+78338270 | None:intergenic |
| TTTCCAGCAGGTGCAAATGA+AGG | 0.551846 | 1.1:-78337318 | MS.gene76298:CDS |
| GATAACCCCATCTGCATTGG+TGG | 0.551913 | 1.1:+78338765 | None:intergenic |
| TAGTTTAGGGTGTACAGATA+GGG | 0.553113 | 1.1:+78337693 | None:intergenic |
| CTGGGACAAGTTCATGGAAG+CGG | 0.554828 | 1.1:+78338372 | None:intergenic |
| CACTGGTAAAGTTCTTGTCT+AGG | 0.557100 | 1.1:+78337771 | None:intergenic |
| CTGGCAAATATGCAGCGCAT+TGG | 0.559080 | 1.1:-78337992 | MS.gene76298:CDS |
| GTTGGGAATGAGAAGAAAAG+AGG | 0.561118 | 1.1:+78337636 | None:intergenic |
| GAAAAGAGGCCTAGCAATTG+GGG | 0.562110 | 1.1:+78337650 | None:intergenic |
| TAAGCACCCAATTCTTACTT+GGG | 0.563209 | 1.1:-78337593 | MS.gene76298:CDS |
| GTGAACATTGACCACATGCA+AGG | 0.563932 | 1.1:+78337428 | None:intergenic |
| AGGATTCCACCAATGCAGAT+GGG | 0.564418 | 1.1:-78338771 | MS.gene76298:CDS |
| CCTAAAACAGTTTCTTGGTG+GGG | 0.565502 | 1.1:-78338407 | MS.gene76298:CDS |
| TCTAAGCAACATATCCAGCC+AGG | 0.566820 | 1.1:+78338254 | None:intergenic |
| TTAATGTTCTGCTTCAAAGG+TGG | 0.568031 | 1.1:+78340142 | None:intergenic |
| CATATATCTGAACCAACCAT+TGG | 0.568580 | 1.1:+78337891 | None:intergenic |
| CTTGGGCACACCTTTCCTGT+AGG | 0.572378 | 1.1:+78338287 | None:intergenic |
| CAAGTGGAACAGGACCTGGC+TGG | 0.574211 | 1.1:-78338268 | MS.gene76298:CDS |
| CAAAATTACATACACGGACG+AGG | 0.575505 | 1.1:-78337030 | MS.gene76298:CDS |
| ATGAGACTGAGAATCGTTTG+AGG | 0.575745 | 1.1:-78340234 | MS.gene76298:CDS |
| TTAGTGGAGCCCCAATTGCT+AGG | 0.575758 | 1.1:-78337659 | MS.gene76298:CDS |
| AGAACCAACATAAGTAGAGC+GGG | 0.575941 | 1.1:+78338013 | None:intergenic |
| GTTGATGCACTCTTTCCACC+TGG | 0.578199 | 1.1:-78337525 | MS.gene76298:CDS |
| TTTCATGCAAGTGTGAAAGA+AGG | 0.578257 | 1.1:-78337213 | MS.gene76298:CDS |
| ATCAACAACACTAAGAGGCG+TGG | 0.579909 | 1.1:+78339628 | None:intergenic |
| CCAGTTATGGTGTATACCAA+AGG | 0.580821 | 1.1:-78338523 | MS.gene76298:CDS |
| TATTGGTCTTTGAAAACCAG+TGG | 0.581118 | 1.1:+78339965 | None:intergenic |
| CTGGAAAGAATACACAACAT+TGG | 0.582134 | 1.1:-78338590 | MS.gene76298:CDS |
| TGAGACTGAGAATCGTTTGA+GGG | 0.582986 | 1.1:-78340233 | MS.gene76298:CDS |
| CCTATTGCAAAGCTCTTCAG+TGG | 0.583146 | 1.1:+78337851 | None:intergenic |
| CTTTAGGAGGATCACGCGTG+TGG | 0.583667 | 1.1:+78340695 | None:intergenic |
| AAAGTCCAAAGTCACGCGTA+AGG | 0.588714 | 1.1:-78340676 | MS.gene76298:CDS |
| GCAGTTAAAAGGAAGTCCAC+TGG | 0.589329 | 1.1:-78340034 | MS.gene76298:CDS |
| ATTATAGTGGACTGCACTTG+TGG | 0.589749 | 1.1:+78338139 | None:intergenic |
| CAGAACCAACATAAGTAGAG+CGG | 0.592513 | 1.1:+78338012 | None:intergenic |
| TGATGCAAAGAACAAAAGAT+GGG | 0.592705 | 1.1:-78340200 | MS.gene76298:CDS |
| TAGGAGAGTAGTAGTTTGCA+TGG | 0.596826 | 1.1:+78337790 | None:intergenic |
| ACAGGAAAGGTGTGCCCAAG+TGG | 0.597191 | 1.1:-78338284 | MS.gene76298:CDS |
| ATTCGGCTACCGTCTCCCAC+TGG | 0.597682 | 1.1:+78337754 | None:intergenic |
| TGACATACAAGATTGTTGGA+GGG | 0.599298 | 1.1:-78339679 | MS.gene76298:CDS |
| TGTGATAACCCCATCTGCAT+TGG | 0.599649 | 1.1:+78338762 | None:intergenic |
| CTGGAGTTAACAGCAATACC+AGG | 0.601210 | 1.1:+78338542 | None:intergenic |
| TGAACATTGACCACATGCAA+GGG | 0.601566 | 1.1:+78337429 | None:intergenic |
| CAACTCATAAGGCCCTTCAA+GGG | 0.601862 | 1.1:-78338064 | MS.gene76298:CDS |
| AAATGAGTGAAATGCAAGGT+GGG | 0.604634 | 1.1:-78340746 | MS.gene76298:CDS |
| AAGGGCTTAAATATCCCTGT+AGG | 0.605232 | 1.1:-78336973 | MS.gene76298:CDS |
| GGAGAGAACACACAGCCACA+TGG | 0.612891 | 1.1:-78339893 | MS.gene76298:CDS |
| CTATTGCAAAGCTCTTCAGT+GGG | 0.613210 | 1.1:+78337852 | None:intergenic |
| AAACATCACAAGCACACGGT+GGG | 0.616561 | 1.1:-78338225 | MS.gene76298:CDS |
| TTCTAAGATCCATGTATACA+GGG | 0.616903 | 1.1:+78339783 | None:intergenic |
| ACAAGGTGGAATGATATCAA+AGG | 0.616910 | 1.1:-78337376 | MS.gene76298:CDS |
| CATTGGACAGGTGACAATCA+GGG | 0.618247 | 1.1:-78337975 | MS.gene76298:CDS |
| AGCAGGTGCAAATGAAGGAG+AGG | 0.618963 | 1.1:-78337313 | MS.gene76298:CDS |
| GTGCACAATTCCTACAGGAA+AGG | 0.623409 | 1.1:-78338297 | MS.gene76298:CDS |
| CTTGACATAGAAGCCTAGAA+GGG | 0.623560 | 1.1:+78340342 | None:intergenic |
| TCTGTACACCCTAAACTATG+AGG | 0.624919 | 1.1:-78337688 | MS.gene76298:CDS |
| AAATGTCACAATGAGGCTGA+AGG | 0.625056 | 1.1:+78337338 | None:intergenic |
| GGATACAACTTTATCCCATG+TGG | 0.625392 | 1.1:+78339878 | None:intergenic |
| TGGAGAAAAGGACATACTGA+TGG | 0.627650 | 1.1:-78337004 | MS.gene76298:CDS |
| GGATTCCACCAATGCAGATG+GGG | 0.628625 | 1.1:-78338770 | MS.gene76298:CDS |
| CAATCCATAAGCCATCAACT+GGG | 0.630686 | 1.1:+78338354 | None:intergenic |
| TGATCACATGGATGGACACA+AGG | 0.631580 | 1.1:-78338663 | MS.gene76298:CDS |
| GAGAGAACACACAGCCACAT+GGG | 0.635497 | 1.1:-78339892 | MS.gene76298:CDS |
| AATGATGATGATCACATGGA+TGG | 0.638145 | 1.1:-78338671 | MS.gene76298:CDS |
| ATTAATGGCTGCTACATCAG+TGG | 0.640222 | 1.1:+78339832 | None:intergenic |
| TTTAGGAGGATCACGCGTGT+GGG | 0.643359 | 1.1:+78340696 | None:intergenic |
| AGGTGACAATCAGGGTACAT+GGG | 0.648038 | 1.1:-78337967 | MS.gene76298:CDS |
| TAGACAAGAACTTTACCAGT+GGG | 0.654459 | 1.1:-78337769 | MS.gene76298:CDS |
| TCAACAACACTAAGAGGCGT+GGG | 0.655202 | 1.1:+78339629 | None:intergenic |
| GTTTGGTCACAAGTCCAAGA+GGG | 0.655566 | 1.1:-78337180 | MS.gene76298:CDS |
| AATGTCACAATGAGGCTGAA+GGG | 0.661240 | 1.1:+78337339 | None:intergenic |
| ACCATTCTACCAATGCAACA+AGG | 0.665037 | 1.1:-78337393 | MS.gene76298:CDS |
| AAACTATACCATGTTCCAGG+TGG | 0.669325 | 1.1:+78337510 | None:intergenic |
| ATGGAATGATGATGATCACA+TGG | 0.669871 | 1.1:-78338675 | MS.gene76298:CDS |
| AGAACTTTACCAGTGGGAGA+CGG | 0.673338 | 1.1:-78337763 | MS.gene76298:CDS |
| TTGACATAGAAGCCTAGAAG+GGG | 0.673957 | 1.1:+78340343 | None:intergenic |
| ACTAAACAAAATTACATACA+CGG | 0.676654 | 1.1:-78337036 | MS.gene76298:CDS |
| GTGGGTCCACTCACACCACA+GGG | 0.676753 | 1.1:-78340728 | MS.gene76298:CDS |
| ATGGATCTTAGAAATGAAGG+TGG | 0.682988 | 1.1:-78339773 | MS.gene76298:CDS |
| AGTTTGGTCACAAGTCCAAG+AGG | 0.685776 | 1.1:-78337181 | MS.gene76298:CDS |
| CCTTAATGCACCCTTGCATG+TGG | 0.686026 | 1.1:-78337439 | MS.gene76298:CDS |
| CTAGACAAGAACTTTACCAG+TGG | 0.689103 | 1.1:-78337770 | MS.gene76298:CDS |
| GGGTGCATTAAGGGTCACGT+TGG | 0.698473 | 1.1:+78337449 | None:intergenic |
| AGTTATGGTGTATACCAAAG+GGG | 0.702184 | 1.1:-78338521 | MS.gene76298:CDS |
| AAAATGAGTGAAATGCAAGG+TGG | 0.706989 | 1.1:-78340747 | MS.gene76298:CDS |
| CTGCTGGAAATGTCACAATG+AGG | 0.707489 | 1.1:+78337331 | None:intergenic |
| GGTGGCAAGCCTAATGCACA+TGG | 0.716525 | 1.1:-78339755 | MS.gene76298:CDS |
| AAAACATCACAAGCACACGG+TGG | 0.716740 | 1.1:-78338226 | MS.gene76298:CDS |
| AATCAGCAAGAAATGCATTG+GGG | 0.721034 | 1.1:-78337734 | MS.gene76298:CDS |
| ATTCTACCAATGCAACAAGG+TGG | 0.724778 | 1.1:-78337390 | MS.gene76298:CDS |
| TGTGGGCCATTCTATCCCTG+TGG | 0.736094 | 1.1:+78340713 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATTTTAATTTAATTGTT+TGG | - | chr1.1:78338343-78338362 | MS.gene76298:CDS | 10.0% |
| !! | TATAACATTCAATATAAGTT+GGG | + | chr1.1:78340064-78340083 | None:intergenic | 15.0% |
| !!! | TGTTTTAATATTTTAAGTCA+CGG | - | chr1.1:78338426-78338445 | MS.gene76298:CDS | 15.0% |
| !! | ACTAAACAAAATTACATACA+CGG | - | chr1.1:78340644-78340663 | MS.gene76298:CDS | 20.0% |
| !! | ATAAATGTGTTAGGATTAAA+TGG | - | chr1.1:78340560-78340579 | MS.gene76298:intron | 20.0% |
| !! | ATGGATTCATTAAAACATAA+AGG | + | chr1.1:78338665-78338684 | None:intergenic | 20.0% |
| !! | CTATAACATTCAATATAAGT+TGG | + | chr1.1:78340065-78340084 | None:intergenic | 20.0% |
| !! | GGATAGTATATTGTATATAT+CGG | - | chr1.1:78338585-78338604 | MS.gene76298:CDS | 20.0% |
| !! | TAGTAGAAATTTCCAAATAT+TGG | + | chr1.1:78337735-78337754 | None:intergenic | 20.0% |
| !!! | AAAATAAGTGCCAATTTTTA+TGG | + | chr1.1:78338331-78338350 | None:intergenic | 20.0% |
| !!! | AAATAAGTGCCAATTTTTAT+GGG | + | chr1.1:78338330-78338349 | None:intergenic | 20.0% |
| !!! | AAGATTTCTTTTTTGAAGAA+GGG | - | chr1.1:78338244-78338263 | MS.gene76298:CDS | 20.0% |
| !!! | AATTTAATTGTTTGGTGATA+GGG | - | chr1.1:78338351-78338370 | MS.gene76298:CDS | 20.0% |
| !!! | GTTTTAATATTTTAAGTCAC+GGG | - | chr1.1:78338427-78338446 | MS.gene76298:CDS | 20.0% |
| !!! | TAAGATTTCTTTTTTGAAGA+AGG | - | chr1.1:78338243-78338262 | MS.gene76298:CDS | 20.0% |
| !!! | TAATTTAATTGTTTGGTGAT+AGG | - | chr1.1:78338350-78338369 | MS.gene76298:CDS | 20.0% |
| !!! | TACACAGAATAATTTTTTGA+TGG | + | chr1.1:78338842-78338861 | None:intergenic | 20.0% |
| !!! | TATTTTATTTGCTATGTGAT+AGG | - | chr1.1:78338889-78338908 | MS.gene76298:intron | 20.0% |
| !!! | TTTATGTTTTAATGAATCCA+TGG | - | chr1.1:78338664-78338683 | MS.gene76298:CDS | 20.0% |
| ! | AAATTCCACTTGATGTTATA+TGG | - | chr1.1:78338986-78339005 | MS.gene76298:intron | 25.0% |
| ! | AATAAAATAAGTGAGCATGT+TGG | + | chr1.1:78338878-78338897 | None:intergenic | 25.0% |
| ! | ACTAATCCATTTATTCATGA+AGG | - | chr1.1:78338623-78338642 | MS.gene76298:CDS | 25.0% |
| ! | ACTGTATCTGTATAAAAAGA+TGG | - | chr1.1:78338543-78338562 | MS.gene76298:CDS | 25.0% |
| ! | AGTATATTGTATATATCGGT+AGG | - | chr1.1:78338589-78338608 | MS.gene76298:CDS | 25.0% |
| ! | ATTGACACAATAAATGTGTT+AGG | - | chr1.1:78340551-78340570 | MS.gene76298:intron | 25.0% |
| ! | CAAGTCATTATTTCAAAAGA+TGG | - | chr1.1:78340206-78340225 | MS.gene76298:CDS | 25.0% |
| ! | CATCTTGAATAGATATCAAA+CGG | + | chr1.1:78337249-78337268 | None:intergenic | 25.0% |
| ! | GTATATTGTATATATCGGTA+GGG | - | chr1.1:78338590-78338609 | MS.gene76298:CDS | 25.0% |
| ! | TAAATAGAAGACAGAATACT+AGG | + | chr1.1:78338225-78338244 | None:intergenic | 25.0% |
| ! | TAAGAAACAAAGTTAGAAGA+AGG | + | chr1.1:78337168-78337187 | None:intergenic | 25.0% |
| ! | TACAAAGTATAAGGATCATT+TGG | + | chr1.1:78337826-78337845 | None:intergenic | 25.0% |
| ! | TACAAATGTATTATCTACGT+AGG | + | chr1.1:78338523-78338542 | None:intergenic | 25.0% |
| ! | TATGATGCTCATAGTATTTA+TGG | - | chr1.1:78339576-78339595 | MS.gene76298:CDS | 25.0% |
| !! | ACTTTGTTCCTTGATTTTTA+AGG | - | chr1.1:78337422-78337441 | MS.gene76298:CDS | 25.0% |
| !! | TATAACATCAAGTGGAATTT+TGG | + | chr1.1:78338986-78339005 | None:intergenic | 25.0% |
| !! | TCCAAAACTTTTAAACTTTC+TGG | - | chr1.1:78339071-78339090 | MS.gene76298:intron | 25.0% |
| !! | TCCAGAAAGTTTAAAAGTTT+TGG | + | chr1.1:78339075-78339094 | None:intergenic | 25.0% |
| !!! | AAGTTTAAAAGTTTTGGATG+TGG | + | chr1.1:78339069-78339088 | None:intergenic | 25.0% |
| !!! | AGTTTAAAAGTTTTGGATGT+GGG | + | chr1.1:78339068-78339087 | None:intergenic | 25.0% |
| !!! | ATGCTGAATTTTGGAATATT+TGG | - | chr1.1:78339762-78339781 | MS.gene76298:CDS | 25.0% |
| !!! | CACAATCTCAGATTTATTTT+TGG | + | chr1.1:78338293-78338312 | None:intergenic | 25.0% |
| !!! | GATGTTTTTATCAAACATGA+GGG | - | chr1.1:78339192-78339211 | MS.gene76298:intron | 25.0% |
| !!! | TGATGTTTTTATCAAACATG+AGG | - | chr1.1:78339191-78339210 | MS.gene76298:intron | 25.0% |
| !!! | TGCTGAATTTTGGAATATTT+GGG | - | chr1.1:78339763-78339782 | MS.gene76298:CDS | 25.0% |
| AAATCAAGGAACAAAGTGTA+AGG | + | chr1.1:78337419-78337438 | None:intergenic | 30.0% | |
| AACAATCTTGTATGTCAAAG+AGG | + | chr1.1:78337998-78338017 | None:intergenic | 30.0% | |
| AAGGAGAAGAATGATATCTA+TGG | - | chr1.1:78337304-78337323 | MS.gene76298:CDS | 30.0% | |
| AATAAACTATACCATGTTCC+AGG | + | chr1.1:78340176-78340195 | None:intergenic | 30.0% | |
| AATATGAGCCTCATAGTTTA+GGG | + | chr1.1:78340003-78340022 | None:intergenic | 30.0% | |
| AATCTCAACACTGATCTATA+TGG | - | chr1.1:78337868-78337887 | MS.gene76298:CDS | 30.0% | |
| ACTTGCATGAAAGTCAATAT+AGG | + | chr1.1:78340459-78340478 | None:intergenic | 30.0% | |
| ATCTCAACACTGATCTATAT+GGG | - | chr1.1:78337869-78337888 | MS.gene76298:CDS | 30.0% | |
| ATTATCTACGTAGGCATATT+TGG | + | chr1.1:78338514-78338533 | None:intergenic | 30.0% | |
| ATTCCAAAATGCCATTATAG+TGG | + | chr1.1:78339557-78339576 | None:intergenic | 30.0% | |
| CTATCAACTTTCACATTTGT+TGG | + | chr1.1:78340623-78340642 | None:intergenic | 30.0% | |
| CTTTCTCCTTCATGAATAAA+TGG | + | chr1.1:78338632-78338651 | None:intergenic | 30.0% | |
| GACCATGTATTGGAATAAAA+TGG | - | chr1.1:78338713-78338732 | MS.gene76298:CDS | 30.0% | |
| GGTATCATACCCATAAAAAT+TGG | - | chr1.1:78338318-78338337 | MS.gene76298:CDS | 30.0% | |
| GTATAAGAGTAATAAGACCA+TGG | + | chr1.1:78338684-78338703 | None:intergenic | 30.0% | |
| GTGTTAGGATTAAATGGAAA+TGG | - | chr1.1:78340566-78340585 | MS.gene76298:intron | 30.0% | |
| GTTCATCATCATCAATGAAT+AGG | + | chr1.1:78340403-78340422 | None:intergenic | 30.0% | |
| TAATATGAGCCTCATAGTTT+AGG | + | chr1.1:78340004-78340023 | None:intergenic | 30.0% | |
| TACATGGATCTTAGAAATGA+AGG | - | chr1.1:78337904-78337923 | MS.gene76298:CDS | 30.0% | |
| TACATTGTGATAATTGATCC+TGG | - | chr1.1:78339120-78339139 | MS.gene76298:intron | 30.0% | |
| TATTCCAAAATTCAGCATAG+TGG | + | chr1.1:78339760-78339779 | None:intergenic | 30.0% | |
| TCAATCCTAAAACAGTTTCT+TGG | - | chr1.1:78339268-78339287 | MS.gene76298:intron | 30.0% | |
| TCAGTGGTATACAAAGTATA+AGG | + | chr1.1:78337835-78337854 | None:intergenic | 30.0% | |
| TCATTCCATATAACATCAAG+TGG | + | chr1.1:78338994-78339013 | None:intergenic | 30.0% | |
| TCTTTGACATACAAGATTGT+TGG | - | chr1.1:78337997-78338016 | MS.gene76298:CDS | 30.0% | |
| TGATGCAAAGAACAAAAGAT+GGG | - | chr1.1:78337480-78337499 | MS.gene76298:CDS | 30.0% | |
| TGTGACTTAATTTAGAGAGA+TGG | + | chr1.1:78338806-78338825 | None:intergenic | 30.0% | |
| TTAAATGGAAATGGAGCAAT+AGG | - | chr1.1:78340575-78340594 | MS.gene76298:intron | 30.0% | |
| ! | ATAAATCTGAGATTGTGATG+TGG | - | chr1.1:78338296-78338315 | MS.gene76298:CDS | 30.0% |
| ! | ATAGCAAAACTTTTACCTAC+AGG | + | chr1.1:78340725-78340744 | None:intergenic | 30.0% |
| ! | ATATCCACTATGCTGAATTT+TGG | - | chr1.1:78339753-78339772 | MS.gene76298:CDS | 30.0% |
| ! | CTTGATTTTTACTTCTTTGC+AGG | - | chr1.1:78338027-78338046 | MS.gene76298:CDS | 30.0% |
| ! | GAATGGATGTGTTTTACAAA+GGG | - | chr1.1:78337971-78337990 | MS.gene76298:CDS | 30.0% |
| ! | GGTTTTCAAAGACCAATATT+TGG | - | chr1.1:78337720-78337739 | MS.gene76298:CDS | 30.0% |
| ! | TAAATCTGAGATTGTGATGT+GGG | - | chr1.1:78338297-78338316 | MS.gene76298:CDS | 30.0% |
| ! | TAGATCAGTGTTGAGATTAA+TGG | + | chr1.1:78337866-78337885 | None:intergenic | 30.0% |
| ! | TAGCAAAACTTTTACCTACA+GGG | + | chr1.1:78340724-78340743 | None:intergenic | 30.0% |
| !! | CATTTAGCTTTGCAGTTAAA+AGG | - | chr1.1:78337635-78337654 | MS.gene76298:CDS | 30.0% |
| !! | CCTGAAGCATTAATTTTGTA+GGG | + | chr1.1:78339489-78339508 | None:intergenic | 30.0% |
| !! | CTTTTAACTGCAAAGCTAAA+TGG | + | chr1.1:78337637-78337656 | None:intergenic | 30.0% |
| !! | TCCTGAAGCATTAATTTTGT+AGG | + | chr1.1:78339490-78339509 | None:intergenic | 30.0% |
| !! | TTCTAAGATCCATGTATACA+GGG | + | chr1.1:78337900-78337919 | None:intergenic | 30.0% |
| !! | TTTCTAAGATCCATGTATAC+AGG | + | chr1.1:78337901-78337920 | None:intergenic | 30.0% |
| !!! | GCTATAGTTTTGAAACCTAT+AGG | + | chr1.1:78339522-78339541 | None:intergenic | 30.0% |
| !!! | GCTGAATTTTGGAATATTTG+GGG | - | chr1.1:78339764-78339783 | MS.gene76298:CDS | 30.0% |
| !!! | GTTTTAGGATTGAGAAAATC+AGG | + | chr1.1:78339261-78339280 | None:intergenic | 30.0% |
| !!! | GTTTTGTTGTTGAATAGCAA+TGG | - | chr1.1:78337949-78337968 | MS.gene76298:CDS | 30.0% |
| !!! | TGCCATTTTATTCCAATACA+TGG | + | chr1.1:78338718-78338737 | None:intergenic | 30.0% |
| !!! | TTTTGTTGTTTGTGAGTCAT+AGG | + | chr1.1:78337038-78337057 | None:intergenic | 30.0% |
| AACAAAACACCATGTGCATT+AGG | + | chr1.1:78337937-78337956 | None:intergenic | 35.0% | |
| AACTATGAGGCTCATATTAG+TGG | - | chr1.1:78340005-78340024 | MS.gene76298:CDS | 35.0% | |
| AAGAAGGAACTGTGAAAGTT+TGG | - | chr1.1:78340483-78340502 | MS.gene76298:CDS | 35.0% | |
| AAGTCCACAAAAATTGGTCA+AGG | - | chr1.1:78337220-78337239 | MS.gene76298:CDS | 35.0% | |
| AATCAGCAAGAAATGCATTG+GGG | - | chr1.1:78339946-78339965 | MS.gene76298:CDS | 35.0% | |
| ACAAGGTGGAATGATATCAA+AGG | - | chr1.1:78340304-78340323 | MS.gene76298:intron | 35.0% | |
| AGAGAGATGGTGATAGTTTA+GGG | + | chr1.1:78338793-78338812 | None:intergenic | 35.0% | |
| AGTTATGGTGTATACCAAAG+GGG | - | chr1.1:78339159-78339178 | MS.gene76298:intron | 35.0% | |
| ATAACAGACACATGCCATAT+AGG | + | chr1.1:78338459-78338478 | None:intergenic | 35.0% | |
| ATACTGATGGTTGGAATGAA+GGG | - | chr1.1:78340689-78340708 | MS.gene76298:CDS | 35.0% | |
| ATAGGTACCATTGAGATAGA+TGG | - | chr1.1:78340593-78340612 | MS.gene76298:intron | 35.0% | |
| ATCATACCAAAAGCCCAATA+AGG | + | chr1.1:78338114-78338133 | None:intergenic | 35.0% | |
| ATCCTAAAACAGTTTCTTGG+TGG | - | chr1.1:78339271-78339290 | MS.gene76298:intron | 35.0% | |
| ATGGATCTTAGAAATGAAGG+TGG | - | chr1.1:78337907-78337926 | MS.gene76298:CDS | 35.0% | |
| CAACATCTTCTACAACAGAT+AGG | + | chr1.1:78338945-78338964 | None:intergenic | 35.0% | |
| CAAGAACAGGAGAAATCATT+AGG | + | chr1.1:78340118-78340137 | None:intergenic | 35.0% | |
| CAGTTATGGTGTATACCAAA+GGG | - | chr1.1:78339158-78339177 | MS.gene76298:intron | 35.0% | |
| CATATATCTGAACCAACCAT+TGG | + | chr1.1:78339792-78339811 | None:intergenic | 35.0% | |
| CATCAAAAGAGACCATGTAT+TGG | - | chr1.1:78338703-78338722 | MS.gene76298:CDS | 35.0% | |
| CCCTACAAAATTAATGCTTC+AGG | - | chr1.1:78339486-78339505 | MS.gene76298:intron | 35.0% | |
| CTCTTAATGTTCTGCTTCAA+AGG | + | chr1.1:78337544-78337563 | None:intergenic | 35.0% | |
| CTGATGCAAAGAACAAAAGA+TGG | - | chr1.1:78337479-78337498 | MS.gene76298:CDS | 35.0% | |
| CTGGAAAGAATACACAACAT+TGG | - | chr1.1:78339090-78339109 | MS.gene76298:intron | 35.0% | |
| GAATCAGCAAGAAATGCATT+GGG | - | chr1.1:78339945-78339964 | MS.gene76298:CDS | 35.0% | |
| GTCTCATGCCTTAAAAATCA+AGG | + | chr1.1:78337433-78337452 | None:intergenic | 35.0% | |
| GTTGTTGAATAGCAATGGAA+TGG | - | chr1.1:78337954-78337973 | MS.gene76298:CDS | 35.0% | |
| TAAGCACCCAATTCTTACTT+GGG | - | chr1.1:78340087-78340106 | MS.gene76298:CDS | 35.0% | |
| TACAGGACTTCTACAAGTTA+AGG | - | chr1.1:78337285-78337304 | MS.gene76298:CDS | 35.0% | |
| TACTGATCAACAACACTAAG+AGG | + | chr1.1:78338060-78338079 | None:intergenic | 35.0% | |
| TAGACAAGAACTTTACCAGT+GGG | - | chr1.1:78339911-78339930 | MS.gene76298:CDS | 35.0% | |
| TAGAGAGATGGTGATAGTTT+AGG | + | chr1.1:78338794-78338813 | None:intergenic | 35.0% | |
| TAGGTACCATTGAGATAGAT+GGG | - | chr1.1:78340594-78340613 | MS.gene76298:intron | 35.0% | |
| TAGTTTAGGGACTAAAGTGA+TGG | + | chr1.1:78338780-78338799 | None:intergenic | 35.0% | |
| TATTGTATATATCGGTAGGG+AGG | - | chr1.1:78338593-78338612 | MS.gene76298:CDS | 35.0% | |
| TCAAACCATTGCAACTCATA+AGG | - | chr1.1:78339605-78339624 | MS.gene76298:CDS | 35.0% | |
| TCCTAAAACAGTTTCTTGGT+GGG | - | chr1.1:78339272-78339291 | MS.gene76298:intron | 35.0% | |
| TCTAATGACTCAGACACATT+TGG | - | chr1.1:78337691-78337710 | MS.gene76298:CDS | 35.0% | |
| TCTATTCAAGATGACCCTAA+TGG | - | chr1.1:78337256-78337275 | MS.gene76298:CDS | 35.0% | |
| TCTCCAAAGTCCACAAAAAT+TGG | - | chr1.1:78337214-78337233 | MS.gene76298:CDS | 35.0% | |
| TGACATACAAGATTGTTGGA+GGG | - | chr1.1:78338001-78338020 | MS.gene76298:CDS | 35.0% | |
| TGCTTTCTATCCATTCTCAA+GGG | - | chr1.1:78339866-78339885 | MS.gene76298:CDS | 35.0% | |
| TGTGTCTGAGTCATTAGAAT+TGG | + | chr1.1:78337689-78337708 | None:intergenic | 35.0% | |
| TTAATGTTCTGCTTCAAAGG+TGG | + | chr1.1:78337541-78337560 | None:intergenic | 35.0% | |
| TTATGTGCAGAGCAATTTGT+GGG | - | chr1.1:78338475-78338494 | MS.gene76298:CDS | 35.0% | |
| TTGACATACAAGATTGTTGG+AGG | - | chr1.1:78338000-78338019 | MS.gene76298:CDS | 35.0% | |
| TTTCATGCAAGTGTGAAAGA+AGG | - | chr1.1:78340467-78340486 | MS.gene76298:CDS | 35.0% | |
| ! | AATGATGATGATCACATGGA+TGG | - | chr1.1:78339009-78339028 | MS.gene76298:intron | 35.0% |
| ! | AGTCCACTATAATGGCATTT+TGG | - | chr1.1:78339551-78339570 | MS.gene76298:intron | 35.0% |
| ! | AGTTTGCTTTGGATAAAGGT+TGG | - | chr1.1:78340525-78340544 | MS.gene76298:intron | 35.0% |
| ! | ATAGTTTAGGGTGTACAGAT+AGG | + | chr1.1:78339991-78340010 | None:intergenic | 35.0% |
| ! | ATGGAATGATGATGATCACA+TGG | - | chr1.1:78339005-78339024 | MS.gene76298:intron | 35.0% |
| ! | ATGGTTGGTTCAGATATATG+TGG | - | chr1.1:78339792-78339811 | MS.gene76298:CDS | 35.0% |
| ! | ATTGCTGTTAACTCCAGTTA+TGG | - | chr1.1:78339144-78339163 | MS.gene76298:intron | 35.0% |
| ! | CAATGCATTTCTTGCTGATT+CGG | + | chr1.1:78339946-78339965 | None:intergenic | 35.0% |
| ! | GGAATGGATGTGTTTTACAA+AGG | - | chr1.1:78337970-78337989 | MS.gene76298:CDS | 35.0% |
| ! | GTAACCTTGACCAATTTTTG+TGG | + | chr1.1:78337227-78337246 | None:intergenic | 35.0% |
| ! | GTTTGCTTTGGATAAAGGTT+GGG | - | chr1.1:78340526-78340545 | MS.gene76298:intron | 35.0% |
| ! | TAGTTTAGGGTGTACAGATA+GGG | + | chr1.1:78339990-78340009 | None:intergenic | 35.0% |
| ! | TCCTTATGATCTTTTGCCTA+GGG | - | chr1.1:78337507-78337526 | MS.gene76298:CDS | 35.0% |
| ! | TGACCAATTTTTGTGGACTT+TGG | + | chr1.1:78337220-78337239 | None:intergenic | 35.0% |
| ! | TTCCTTATGATCTTTTGCCT+AGG | - | chr1.1:78337506-78337525 | MS.gene76298:CDS | 35.0% |
| !! | ATATTTTAAGTCACGGGACT+TGG | - | chr1.1:78338433-78338452 | MS.gene76298:CDS | 35.0% |
| !! | CTTTGAAGCAGAACATTAAG+AGG | - | chr1.1:78337542-78337561 | MS.gene76298:CDS | 35.0% |
| !! | GAAGCATTAATTTTGTAGGG+AGG | + | chr1.1:78339486-78339505 | None:intergenic | 35.0% |
| !! | GTAAAAGTTTTGCTATGACC+TGG | - | chr1.1:78340729-78340748 | MS.gene76298:CDS | 35.0% |
| !! | TATTGGTCTTTGAAAACCAG+TGG | + | chr1.1:78337718-78337737 | None:intergenic | 35.0% |
| AAACTATACCATGTTCCAGG+TGG | + | chr1.1:78340173-78340192 | None:intergenic | 40.0% | |
| AAATGTCACAATGAGGCTGA+AGG | + | chr1.1:78340345-78340364 | None:intergenic | 40.0% | |
| AACCATTCTTGGCTCAAGTT+TGG | - | chr1.1:78339217-78339236 | MS.gene76298:intron | 40.0% | |
| AAGAAAAGAGGCCTAGCAAT+TGG | + | chr1.1:78340035-78340054 | None:intergenic | 40.0% | |
| AAGGGCTTAAATATCCCTGT+AGG | - | chr1.1:78340707-78340726 | MS.gene76298:CDS | 40.0% | |
| AAGGTAAGAGAGACAAAGAG+TGG | + | chr1.1:78337149-78337168 | None:intergenic | 40.0% | |
| AATGTCACAATGAGGCTGAA+GGG | + | chr1.1:78340344-78340363 | None:intergenic | 40.0% | |
| ACAAGTGCAGTCCACTATAA+TGG | - | chr1.1:78339543-78339562 | MS.gene76298:intron | 40.0% | |
| ACCATTCTACCAATGCAACA+AGG | - | chr1.1:78340287-78340306 | MS.gene76298:intron | 40.0% | |
| ACTTGACATAGAAGCCTAGA+AGG | + | chr1.1:78337342-78337361 | None:intergenic | 40.0% | |
| AGAAAAGAGGCCTAGCAATT+GGG | + | chr1.1:78340034-78340053 | None:intergenic | 40.0% | |
| AGAACCAACATAAGTAGAGC+GGG | + | chr1.1:78339670-78339689 | None:intergenic | 40.0% | |
| AGATGCTTCTCTGTATGGTT+TGG | - | chr1.1:78337765-78337784 | MS.gene76298:CDS | 40.0% | |
| AGTCCTGTAATAGCACCATT+AGG | + | chr1.1:78337274-78337293 | None:intergenic | 40.0% | |
| ATCATTCCACCTTGTTGCAT+TGG | + | chr1.1:78340299-78340318 | None:intergenic | 40.0% | |
| ATGAGACTGAGAATCGTTTG+AGG | - | chr1.1:78337446-78337465 | MS.gene76298:CDS | 40.0% | |
| ATTAATGGCTGCTACATCAG+TGG | + | chr1.1:78337851-78337870 | None:intergenic | 40.0% | |
| ATTCTACCAATGCAACAAGG+TGG | - | chr1.1:78340290-78340309 | MS.gene76298:intron | 40.0% | |
| ATTTCTCCTGTTCTTGAGCA+AGG | - | chr1.1:78340122-78340141 | MS.gene76298:CDS | 40.0% | |
| CAAAATTACATACACGGACG+AGG | - | chr1.1:78340650-78340669 | MS.gene76298:CDS | 40.0% | |
| CAAATGAAGGAGAGGCTAAA+GGG | - | chr1.1:78340375-78340394 | MS.gene76298:CDS | 40.0% | |
| CAATCCATAAGCCATCAACT+GGG | + | chr1.1:78339329-78339348 | None:intergenic | 40.0% | |
| CACTGGTAAAGTTCTTGTCT+AGG | + | chr1.1:78339912-78339931 | None:intergenic | 40.0% | |
| CAGAACCAACATAAGTAGAG+CGG | + | chr1.1:78339671-78339690 | None:intergenic | 40.0% | |
| CATACTGATGGTTGGAATGA+AGG | - | chr1.1:78340688-78340707 | MS.gene76298:CDS | 40.0% | |
| CCAGAAATGAAGCTTGGAAA+TGG | - | chr1.1:78340425-78340444 | MS.gene76298:CDS | 40.0% | |
| CCAGTTATGGTGTATACCAA+AGG | - | chr1.1:78339157-78339176 | MS.gene76298:intron | 40.0% | |
| CCATTTCCAAGCTTCATTTC+TGG | + | chr1.1:78340428-78340447 | None:intergenic | 40.0% | |
| CCTAAAACAGTTTCTTGGTG+GGG | - | chr1.1:78339273-78339292 | MS.gene76298:intron | 40.0% | |
| CCTTTGGTATACACCATAAC+TGG | + | chr1.1:78339160-78339179 | None:intergenic | 40.0% | |
| CGAATCAGCAAGAAATGCAT+TGG | - | chr1.1:78339944-78339963 | MS.gene76298:CDS | 40.0% | |
| CTAAGCACCCAATTCTTACT+TGG | - | chr1.1:78340086-78340105 | MS.gene76298:CDS | 40.0% | |
| CTAGACAAGAACTTTACCAG+TGG | - | chr1.1:78339910-78339929 | MS.gene76298:CDS | 40.0% | |
| CTATTGCAAAGCTCTTCAGT+GGG | + | chr1.1:78339831-78339850 | None:intergenic | 40.0% | |
| CTTGACATAGAAGCCTAGAA+GGG | + | chr1.1:78337341-78337360 | None:intergenic | 40.0% | |
| GAAAAGGACATACTGATGGT+TGG | - | chr1.1:78340680-78340699 | MS.gene76298:CDS | 40.0% | |
| GAACTTCCAGAAATGAAGCT+TGG | - | chr1.1:78340419-78340438 | MS.gene76298:CDS | 40.0% | |
| GAAGCTTCAAATTTCTGCTC+TGG | - | chr1.1:78339357-78339376 | MS.gene76298:intron | 40.0% | |
| GACATACAAGATTGTTGGAG+GGG | - | chr1.1:78338002-78338021 | MS.gene76298:CDS | 40.0% | |
| GAGAGACAAAGAGTGGATAA+TGG | + | chr1.1:78337142-78337161 | None:intergenic | 40.0% | |
| GATCAGTACACTTCCTTCAT+TGG | - | chr1.1:78338072-78338091 | MS.gene76298:CDS | 40.0% | |
| GATGCTTCTCTGTATGGTTT+GGG | - | chr1.1:78337766-78337785 | MS.gene76298:CDS | 40.0% | |
| GCAAAAACATCACAAGCACA+CGG | - | chr1.1:78339451-78339470 | MS.gene76298:intron | 40.0% | |
| GGATACAACTTTATCCCATG+TGG | + | chr1.1:78337805-78337824 | None:intergenic | 40.0% | |
| GGCATTGTCTCGTGATTTAT+GGG | - | chr1.1:78338564-78338583 | MS.gene76298:CDS | 40.0% | |
| GTAGAGCGGGTCAAAATAAA+AGG | + | chr1.1:78339657-78339676 | None:intergenic | 40.0% | |
| GTCCTGTAATAGCACCATTA+GGG | + | chr1.1:78337273-78337292 | None:intergenic | 40.0% | |
| GTGCTTTCTATCCATTCTCA+AGG | - | chr1.1:78339865-78339884 | MS.gene76298:CDS | 40.0% | |
| GTTATGTGCAGAGCAATTTG+TGG | - | chr1.1:78338474-78338493 | MS.gene76298:CDS | 40.0% | |
| GTTGGGAATGAGAAGAAAAG+AGG | + | chr1.1:78340047-78340066 | None:intergenic | 40.0% | |
| TCAATCCATAAGCCATCAAC+TGG | + | chr1.1:78339330-78339349 | None:intergenic | 40.0% | |
| TCAGGATTACAAGCTCCTAT+AGG | - | chr1.1:78339504-78339523 | MS.gene76298:intron | 40.0% | |
| TCCCTAGGCAAAAGATCATA+AGG | + | chr1.1:78337511-78337530 | None:intergenic | 40.0% | |
| TCTGTACACCCTAAACTATG+AGG | - | chr1.1:78339992-78340011 | MS.gene76298:CDS | 40.0% | |
| TGAACATTGACCACATGCAA+GGG | + | chr1.1:78340254-78340273 | None:intergenic | 40.0% | |
| TGAGACTGAGAATCGTTTGA+GGG | - | chr1.1:78337447-78337466 | MS.gene76298:CDS | 40.0% | |
| TGGAGAAAAGGACATACTGA+TGG | - | chr1.1:78340676-78340695 | MS.gene76298:CDS | 40.0% | |
| TGGCATTGTCTCGTGATTTA+TGG | - | chr1.1:78338563-78338582 | MS.gene76298:CDS | 40.0% | |
| TGGGTAGTTAACTGGATTGA+GGG | + | chr1.1:78339049-78339068 | None:intergenic | 40.0% | |
| TGGTTTCCCATCTATCTCAA+TGG | + | chr1.1:78340603-78340622 | None:intergenic | 40.0% | |
| TTCAAGGGCTTCAAGGAAAA+AGG | - | chr1.1:78339631-78339650 | MS.gene76298:CDS | 40.0% | |
| TTGACATAGAAGCCTAGAAG+GGG | + | chr1.1:78337340-78337359 | None:intergenic | 40.0% | |
| TTTCTCCTGTTCTTGAGCAA+GGG | - | chr1.1:78340123-78340142 | MS.gene76298:CDS | 40.0% | |
| TTTGGATGTGGGTAGTTAAC+TGG | + | chr1.1:78339057-78339076 | None:intergenic | 40.0% | |
| ! | ACCTTGTTGCATTGGTAGAA+TGG | + | chr1.1:78340291-78340310 | None:intergenic | 40.0% |
| ! | GGCAAGTTTGCTTTGGATAA+AGG | - | chr1.1:78340521-78340540 | MS.gene76298:intron | 40.0% |
| ! | TAGGAGAGTAGTAGTTTGCA+TGG | + | chr1.1:78339893-78339912 | None:intergenic | 40.0% |
| ! | TTTGCTATGACCTGGAAGAT+GGG | - | chr1.1:78340737-78340756 | MS.gene76298:CDS | 40.0% |
| ! | TTTTCCTTGAAGCCCTTGAA+GGG | + | chr1.1:78339631-78339650 | None:intergenic | 40.0% |
| ! | TTTTTCCTTGAAGCCCTTGA+AGG | + | chr1.1:78339632-78339651 | None:intergenic | 40.0% |
| !! | ACCATACAGAGAAGCATCTT+TGG | + | chr1.1:78337764-78337783 | None:intergenic | 40.0% |
| !! | ACTTTTGAGTAAGGCAGCAT+GGG | + | chr1.1:78337094-78337113 | None:intergenic | 40.0% |
| !! | ATTATAGTGGACTGCACTTG+TGG | + | chr1.1:78339544-78339563 | None:intergenic | 40.0% |
| !! | CCATACAGAGAAGCATCTTT+GGG | + | chr1.1:78337763-78337782 | None:intergenic | 40.0% |
| !! | GTCAAAAAGAGTATCACCAG+TGG | + | chr1.1:78337665-78337684 | None:intergenic | 40.0% |
| !! | TGCAATAGGTGGATTGAAGT+TGG | - | chr1.1:78339843-78339862 | MS.gene76298:CDS | 40.0% |
| !! | TTTTGCTATGACCTGGAAGA+TGG | - | chr1.1:78340736-78340755 | MS.gene76298:CDS | 40.0% |
| AAAACATCACAAGCACACGG+TGG | - | chr1.1:78339454-78339473 | MS.gene76298:intron | 45.0% | |
| AAACATCACAAGCACACGGT+GGG | - | chr1.1:78339455-78339474 | MS.gene76298:intron | 45.0% | |
| AAAGTCCAAAGTCACGCGTA+AGG | - | chr1.1:78337004-78337023 | MS.gene76298:CDS | 45.0% | |
| AAATATGCAGCGCATTGGAC+AGG | - | chr1.1:78339693-78339712 | MS.gene76298:CDS | 45.0% | |
| ACATGAGGGTGAACCATTCT+TGG | - | chr1.1:78339206-78339225 | MS.gene76298:intron | 45.0% | |
| AGAACTTTACCAGTGGGAGA+CGG | - | chr1.1:78339917-78339936 | MS.gene76298:CDS | 45.0% | |
| AGGATTCCACCAATGCAGAT+GGG | - | chr1.1:78338909-78338928 | MS.gene76298:intron | 45.0% | |
| AGGTGACAATCAGGGTACAT+GGG | - | chr1.1:78339713-78339732 | MS.gene76298:CDS | 45.0% | |
| AGTTTGGTCACAAGTCCAAG+AGG | - | chr1.1:78340499-78340518 | MS.gene76298:intron | 45.0% | |
| ATCAACAACACTAAGAGGCG+TGG | + | chr1.1:78338055-78338074 | None:intergenic | 45.0% | |
| ATGTTCTGCTTCAAAGGTGG+TGG | + | chr1.1:78337538-78337557 | None:intergenic | 45.0% | |
| ATTCTTGGCTCAAGTTTGGC+CGG | - | chr1.1:78339221-78339240 | MS.gene76298:intron | 45.0% | |
| CAAAGTCACGCGTAAGGTAA+TGG | - | chr1.1:78337010-78337029 | MS.gene76298:CDS | 45.0% | |
| CAACTCATAAGGCCCTTCAA+GGG | - | chr1.1:78339616-78339635 | MS.gene76298:CDS | 45.0% | |
| CAAGAAATGCATTGGGGATG+AGG | - | chr1.1:78339952-78339971 | MS.gene76298:CDS | 45.0% | |
| CATCAACTGGGACAAGTTCA+TGG | + | chr1.1:78339317-78339336 | None:intergenic | 45.0% | |
| CATCATTAGCCATACCCCTT+TGG | + | chr1.1:78339176-78339195 | None:intergenic | 45.0% | |
| CATGAACTTGTCCCAGTTGA+TGG | - | chr1.1:78339315-78339334 | MS.gene76298:intron | 45.0% | |
| CATTACCTTACGCGTGACTT+TGG | + | chr1.1:78337012-78337031 | None:intergenic | 45.0% | |
| CATTGGACAGGTGACAATCA+GGG | - | chr1.1:78339705-78339724 | MS.gene76298:CDS | 45.0% | |
| CCAAAAGCCCAATAAGGCAT+TGG | + | chr1.1:78338108-78338127 | None:intergenic | 45.0% | |
| CCACTGAAGAGCTTTGCAAT+AGG | - | chr1.1:78339829-78339848 | MS.gene76298:CDS | 45.0% | |
| CCCAAAGATGCTTCTCTGTA+TGG | - | chr1.1:78337760-78337779 | MS.gene76298:CDS | 45.0% | |
| CCTATTGCAAAGCTCTTCAG+TGG | + | chr1.1:78339832-78339851 | None:intergenic | 45.0% | |
| CTCATTGTGACATTTCCAGC+AGG | - | chr1.1:78340350-78340369 | MS.gene76298:CDS | 45.0% | |
| CTGAAGAGCTTTGCAATAGG+TGG | - | chr1.1:78339832-78339851 | MS.gene76298:CDS | 45.0% | |
| CTGCTGGAAATGTCACAATG+AGG | + | chr1.1:78340352-78340371 | None:intergenic | 45.0% | |
| CTGGAGTTAACAGCAATACC+AGG | + | chr1.1:78339141-78339160 | None:intergenic | 45.0% | |
| GAAAAGAGGCCTAGCAATTG+GGG | + | chr1.1:78340033-78340052 | None:intergenic | 45.0% | |
| GCAAATGAAGGAGAGGCTAA+AGG | - | chr1.1:78340374-78340393 | MS.gene76298:CDS | 45.0% | |
| GCAGTTAAAAGGAAGTCCAC+TGG | - | chr1.1:78337646-78337665 | MS.gene76298:CDS | 45.0% | |
| GCTGCTCCCAAGTAAGAATT+GGG | + | chr1.1:78340096-78340115 | None:intergenic | 45.0% | |
| GGTAAGTGCACAATTCCTAC+AGG | - | chr1.1:78339378-78339397 | MS.gene76298:intron | 45.0% | |
| GTGAACATTGACCACATGCA+AGG | + | chr1.1:78340255-78340274 | None:intergenic | 45.0% | |
| GTGCACAATTCCTACAGGAA+AGG | - | chr1.1:78339383-78339402 | MS.gene76298:intron | 45.0% | |
| GTGGGTAGTTAACTGGATTG+AGG | + | chr1.1:78339050-78339069 | None:intergenic | 45.0% | |
| GTTTGGTCACAAGTCCAAGA+GGG | - | chr1.1:78340500-78340519 | MS.gene76298:intron | 45.0% | |
| TACGCGTGACTTTGGACTTT+AGG | + | chr1.1:78337004-78337023 | None:intergenic | 45.0% | |
| TAGGATTCCACCAATGCAGA+TGG | - | chr1.1:78338908-78338927 | MS.gene76298:intron | 45.0% | |
| TCTAAGCAACATATCCAGCC+AGG | + | chr1.1:78339429-78339448 | None:intergenic | 45.0% | |
| TGATCACATGGATGGACACA+AGG | - | chr1.1:78339017-78339036 | MS.gene76298:intron | 45.0% | |
| TGGTGTATACCAAAGGGGTA+TGG | - | chr1.1:78339164-78339183 | MS.gene76298:intron | 45.0% | |
| TGTGATAACCCCATCTGCAT+TGG | + | chr1.1:78338921-78338940 | None:intergenic | 45.0% | |
| TTGACCCGCTCTACTTATGT+TGG | - | chr1.1:78339663-78339682 | MS.gene76298:CDS | 45.0% | |
| TTTCCAGCAGGTGCAAATGA+AGG | - | chr1.1:78340362-78340381 | MS.gene76298:CDS | 45.0% | |
| TTTGCATGGTCCCTTGAGAA+TGG | + | chr1.1:78339879-78339898 | None:intergenic | 45.0% | |
| ! | AAGGGCCTTATGAGTTGCAA+TGG | + | chr1.1:78339613-78339632 | None:intergenic | 45.0% |
| ! | ACCAGCTCCAATGCCTTATT+GGG | - | chr1.1:78338098-78338117 | MS.gene76298:CDS | 45.0% |
| ! | ATATTTGGGGTGCCAATGGT+TGG | - | chr1.1:78339777-78339796 | MS.gene76298:CDS | 45.0% |
| ! | CACATGCAAGGGTGCATTAA+GGG | + | chr1.1:78340243-78340262 | None:intergenic | 45.0% |
| ! | CCCCACCAAGAAACTGTTTT+AGG | + | chr1.1:78339276-78339295 | None:intergenic | 45.0% |
| ! | CTCAAAAGTGTGTGCTGCTA+TGG | - | chr1.1:78337105-78337124 | MS.gene76298:CDS | 45.0% |
| ! | GTTTTCCCTTGCTCAAGAAC+AGG | + | chr1.1:78340131-78340150 | None:intergenic | 45.0% |
| ! | TCAACAACACTAAGAGGCGT+GGG | + | chr1.1:78338054-78338073 | None:intergenic | 45.0% |
| ! | TGGAATATTTGGGGTGCCAA+TGG | - | chr1.1:78339773-78339792 | MS.gene76298:CDS | 45.0% |
| !! | CACTTTTGAGTAAGGCAGCA+TGG | + | chr1.1:78337095-78337114 | None:intergenic | 45.0% |
| !! | CCAATGCCTTATTGGGCTTT+TGG | - | chr1.1:78338105-78338124 | MS.gene76298:CDS | 45.0% |
| !! | CGCTCTACTTATGTTGGTTC+TGG | - | chr1.1:78339669-78339688 | MS.gene76298:CDS | 45.0% |
| !! | GACCCTAATGGTGCTATTAC+AGG | - | chr1.1:78337268-78337287 | MS.gene76298:CDS | 45.0% |
| !! | GCAGCACACACTTTTGAGTA+AGG | + | chr1.1:78337103-78337122 | None:intergenic | 45.0% |
| !! | TTGTCCCAGTTGATGGCTTA+TGG | - | chr1.1:78339322-78339341 | MS.gene76298:intron | 45.0% |
| AAGCCTAGAAGGGGAATGTC+TGG | + | chr1.1:78337331-78337350 | None:intergenic | 50.0% | |
| AGCAGGTGCAAATGAAGGAG+AGG | - | chr1.1:78340367-78340386 | MS.gene76298:CDS | 50.0% | |
| CACTCTTTCCACCTGGAACA+TGG | - | chr1.1:78340162-78340181 | MS.gene76298:CDS | 50.0% | |
| CAGGTGACAATCAGGGTACA+TGG | - | chr1.1:78339712-78339731 | MS.gene76298:CDS | 50.0% | |
| CCAAAGCAAACTTGCCCTCT+TGG | + | chr1.1:78340517-78340536 | None:intergenic | 50.0% | |
| CCTTAATGCACCCTTGCATG+TGG | - | chr1.1:78340241-78340260 | MS.gene76298:intron | 50.0% | |
| CTCACACCACAGGGATAGAA+TGG | - | chr1.1:78336961-78336980 | MS.gene76298:CDS | 50.0% | |
| CTCAGACACATTTGGTCCAC+TGG | - | chr1.1:78337699-78337718 | MS.gene76298:CDS | 50.0% | |
| CTGGCAAATATGCAGCGCAT+TGG | - | chr1.1:78339688-78339707 | MS.gene76298:CDS | 50.0% | |
| CTGGGACAAGTTCATGGAAG+CGG | + | chr1.1:78339311-78339330 | None:intergenic | 50.0% | |
| GACCAGCTCCAATGCCTTAT+TGG | - | chr1.1:78338097-78338116 | MS.gene76298:CDS | 50.0% | |
| GAGAGAACACACAGCCACAT+GGG | - | chr1.1:78337788-78337807 | MS.gene76298:CDS | 50.0% | |
| GATAACCCCATCTGCATTGG+TGG | + | chr1.1:78338918-78338937 | None:intergenic | 50.0% | |
| GCAACTCATAAGGCCCTTCA+AGG | - | chr1.1:78339615-78339634 | MS.gene76298:CDS | 50.0% | |
| GCATTGGACAGGTGACAATC+AGG | - | chr1.1:78339704-78339723 | MS.gene76298:CDS | 50.0% | |
| GCGTGACTTTGGACTTTAGG+AGG | + | chr1.1:78337001-78337020 | None:intergenic | 50.0% | |
| GGATTCCACCAATGCAGATG+GGG | - | chr1.1:78338910-78338929 | MS.gene76298:intron | 50.0% | |
| GGCCAAACTTGAGCCAAGAA+TGG | + | chr1.1:78339222-78339241 | None:intergenic | 50.0% | |
| GGCTGCTCCCAAGTAAGAAT+TGG | + | chr1.1:78340097-78340116 | None:intergenic | 50.0% | |
| GTTGATGCACTCTTTCCACC+TGG | - | chr1.1:78340155-78340174 | MS.gene76298:CDS | 50.0% | |
| TACATACACGGACGAGGAGA+TGG | - | chr1.1:78340656-78340675 | MS.gene76298:CDS | 50.0% | |
| TCTCCTTCATTTGCACCTGC+TGG | + | chr1.1:78340368-78340387 | None:intergenic | 50.0% | |
| TGGGTCTCACCCTGTATACA+TGG | - | chr1.1:78337888-78337907 | MS.gene76298:CDS | 50.0% | |
| TTAGTGGAGCCCCAATTGCT+AGG | - | chr1.1:78340021-78340040 | MS.gene76298:CDS | 50.0% | |
| TTCTATCCCTGTGGTGTGAG+TGG | + | chr1.1:78336961-78336980 | None:intergenic | 50.0% | |
| TTCTTGGCTCAAGTTTGGCC+GGG | - | chr1.1:78339222-78339241 | MS.gene76298:intron | 50.0% | |
| TTGAGTAAGGCAGCATGGGA+GGG | + | chr1.1:78337090-78337109 | None:intergenic | 50.0% | |
| TTTAGGAGGATCACGCGTGT+GGG | + | chr1.1:78336987-78337006 | None:intergenic | 50.0% | |
| TTTGAGTAAGGCAGCATGGG+AGG | + | chr1.1:78337091-78337110 | None:intergenic | 50.0% | |
| ! | CCAAGAGGGCAAGTTTGCTT+TGG | - | chr1.1:78340514-78340533 | MS.gene76298:intron | 50.0% |
| ! | CCACATGCAAGGGTGCATTA+AGG | + | chr1.1:78340244-78340263 | None:intergenic | 50.0% |
| ! | TCAGGAAAGTACACTGCTCC+CGG | + | chr1.1:78339243-78339262 | None:intergenic | 50.0% |
| ! | TGGAGCTGGTCTACCAATGA+AGG | + | chr1.1:78338088-78338107 | None:intergenic | 50.0% |
| ! | TTGTTTGGTGATAGGGCTCG+TGG | - | chr1.1:78338358-78338377 | MS.gene76298:CDS | 50.0% |
| !! | CAAAGCTCTTCAGTGGGTTG+TGG | + | chr1.1:78339825-78339844 | None:intergenic | 50.0% |
| AAGGCCCTTCAAGGGCTTCA+AGG | - | chr1.1:78339624-78339643 | MS.gene76298:CDS | 55.0% | |
| AAGGTGTGCCCAAGTGGAAC+AGG | - | chr1.1:78339402-78339421 | MS.gene76298:intron | 55.0% | |
| AGCCAGGTCCTGTTCCACTT+GGG | + | chr1.1:78339413-78339432 | None:intergenic | 55.0% | |
| CGGACGAGGAGATGGAGAAA+AGG | - | chr1.1:78340664-78340683 | MS.gene76298:CDS | 55.0% | |
| CTTGGGCACACCTTTCCTGT+AGG | + | chr1.1:78339396-78339415 | None:intergenic | 55.0% | |
| GGAGAGAACACACAGCCACA+TGG | - | chr1.1:78337787-78337806 | MS.gene76298:CDS | 55.0% | |
| GGGTGCATTAAGGGTCACGT+TGG | + | chr1.1:78340234-78340253 | None:intergenic | 55.0% | |
| GGTCCAGACATTCCCCTTCT+AGG | - | chr1.1:78337325-78337344 | MS.gene76298:CDS | 55.0% | |
| GGTGGCAAGCCTAATGCACA+TGG | - | chr1.1:78337925-78337944 | MS.gene76298:CDS | 55.0% | |
| GTCACGGGACTTGGCCTATA+TGG | - | chr1.1:78338442-78338461 | MS.gene76298:CDS | 55.0% | |
| TGTGGGCCATTCTATCCCTG+TGG | + | chr1.1:78336970-78336989 | None:intergenic | 55.0% | |
| ! | AAAGGTGGTGGTTGCTCCCT+AGG | + | chr1.1:78337526-78337545 | None:intergenic | 55.0% |
| ! | ACAGGAAAGGTGTGCCCAAG+TGG | - | chr1.1:78339396-78339415 | MS.gene76298:intron | 55.0% |
| ! | CTTTAGGAGGATCACGCGTG+TGG | + | chr1.1:78336988-78337007 | None:intergenic | 55.0% |
| !! | GCCCAATAAGGCATTGGAGC+TGG | + | chr1.1:78338102-78338121 | None:intergenic | 55.0% |
| ATTCGGCTACCGTCTCCCAC+TGG | + | chr1.1:78339929-78339948 | None:intergenic | 60.0% | |
| CAAGTGGAACAGGACCTGGC+TGG | - | chr1.1:78339412-78339431 | MS.gene76298:intron | 60.0% | |
| CAGCCAGGTCCTGTTCCACT+TGG | + | chr1.1:78339414-78339433 | None:intergenic | 60.0% | |
| GTGGGTCCACTCACACCACA+GGG | - | chr1.1:78336952-78336971 | MS.gene76298:CDS | 60.0% | |
| TGCCCAAGTGGAACAGGACC+TGG | - | chr1.1:78339408-78339427 | MS.gene76298:intron | 60.0% | |
| GGTGGGTCCACTCACACCAC+AGG | - | chr1.1:78336951-78336970 | MS.gene76298:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78336936 | 78340766 | 78336936 | ID=MS.gene76298 |
| chr1.1 | mRNA | 78336936 | 78340766 | 78336936 | ID=MS.gene76298.t1;Parent=MS.gene76298 |
| chr1.1 | exon | 78340634 | 78340766 | 78340634 | ID=MS.gene76298.t1.exon1;Parent=MS.gene76298.t1 |
| chr1.1 | CDS | 78340634 | 78340766 | 78340634 | ID=cds.MS.gene76298.t1;Parent=MS.gene76298.t1 |
| chr1.1 | exon | 78340343 | 78340508 | 78340343 | ID=MS.gene76298.t1.exon2;Parent=MS.gene76298.t1 |
| chr1.1 | CDS | 78340343 | 78340508 | 78340343 | ID=cds.MS.gene76298.t1;Parent=MS.gene76298.t1 |
| chr1.1 | exon | 78339576 | 78340258 | 78339576 | ID=MS.gene76298.t1.exon3;Parent=MS.gene76298.t1 |
| chr1.1 | CDS | 78339576 | 78340258 | 78339576 | ID=cds.MS.gene76298.t1;Parent=MS.gene76298.t1 |
| chr1.1 | exon | 78336936 | 78338791 | 78336936 | ID=MS.gene76298.t1.exon4;Parent=MS.gene76298.t1 |
| chr1.1 | CDS | 78336936 | 78338791 | 78336936 | ID=cds.MS.gene76298.t1;Parent=MS.gene76298.t1 |
| Gene Sequence |
| Protein sequence |
