Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76365.t1 | XP_003613438.2 | 86.2 | 94 | 13 | 0 | 3 | 96 | 77 | 170 | 6.10E-37 | 164.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76365.t1 | O48686 | 71.6 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 4.4e-28 | 125.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76365.t1 | G7K6W4 | 86.2 | 94 | 13 | 0 | 3 | 96 | 77 | 170 | 4.4e-37 | 164.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene76365.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051262 | MS.gene76365 | 0.948015 | 2.18E-106 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76365.t1 | MTR_5g036670 | 86.170 | 94 | 13 | 0 | 3 | 96 | 77 | 170 | 1.41e-47 | 166 |
| MS.gene76365.t1 | MTR_8g062700 | 71.250 | 80 | 23 | 0 | 3 | 82 | 76 | 155 | 7.45e-32 | 120 |
| MS.gene76365.t1 | MTR_8g062700 | 71.250 | 80 | 23 | 0 | 3 | 82 | 76 | 155 | 7.52e-32 | 120 |
| MS.gene76365.t1 | MTR_6g008970 | 64.773 | 88 | 31 | 0 | 3 | 90 | 97 | 184 | 1.22e-30 | 117 |
| MS.gene76365.t1 | MTR_6g008995 | 63.636 | 88 | 30 | 2 | 3 | 90 | 14 | 99 | 2.85e-27 | 106 |
| MS.gene76365.t1 | MTR_6g008995 | 63.636 | 88 | 30 | 2 | 3 | 90 | 71 | 156 | 4.46e-27 | 106 |
| MS.gene76365.t1 | MTR_1g023820 | 100.000 | 36 | 0 | 0 | 3 | 38 | 21 | 56 | 3.33e-19 | 79.3 |
| MS.gene76365.t1 | MTR_7g013410 | 41.935 | 93 | 43 | 3 | 3 | 92 | 32 | 116 | 9.87e-16 | 70.5 |
| MS.gene76365.t1 | MTR_8g062350 | 32.374 | 139 | 52 | 4 | 8 | 107 | 53 | 188 | 1.14e-13 | 66.6 |
| MS.gene76365.t1 | MTR_1g105955 | 44.872 | 78 | 36 | 2 | 1 | 78 | 48 | 118 | 1.18e-12 | 63.5 |
| MS.gene76365.t1 | MTR_0091s0080 | 34.066 | 91 | 56 | 2 | 89 | 179 | 387 | 473 | 4.33e-12 | 63.9 |
| MS.gene76365.t1 | MTR_1g105960 | 56.818 | 44 | 19 | 0 | 3 | 46 | 35 | 78 | 5.65e-12 | 60.1 |
| MS.gene76365.t1 | MTR_4g133300 | 36.905 | 84 | 47 | 1 | 3 | 86 | 43 | 120 | 3.57e-11 | 60.5 |
| MS.gene76365.t1 | MTR_4g133470 | 38.750 | 80 | 43 | 1 | 3 | 82 | 43 | 116 | 3.91e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76365.t1 | AT1G70060 | 70.787 | 89 | 25 | 1 | 3 | 90 | 48 | 136 | 3.57e-34 | 127 |
| MS.gene76365.t1 | AT1G70060 | 70.787 | 89 | 25 | 1 | 3 | 90 | 48 | 136 | 3.57e-34 | 127 |
| MS.gene76365.t1 | AT1G24190 | 71.591 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 9.96e-34 | 126 |
| MS.gene76365.t1 | AT1G24190 | 71.591 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 1.02e-33 | 126 |
| MS.gene76365.t1 | AT1G24190 | 71.591 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 1.06e-33 | 126 |
| MS.gene76365.t1 | AT3G01320 | 60.000 | 90 | 35 | 1 | 3 | 92 | 91 | 179 | 1.02e-26 | 106 |
| MS.gene76365.t1 | AT5G15020 | 62.791 | 86 | 30 | 1 | 4 | 89 | 87 | 170 | 1.05e-26 | 106 |
| MS.gene76365.t1 | AT5G15020 | 62.791 | 86 | 30 | 1 | 4 | 89 | 87 | 170 | 1.05e-26 | 106 |
| MS.gene76365.t1 | AT3G01320 | 60.000 | 90 | 35 | 1 | 3 | 92 | 91 | 179 | 1.05e-26 | 106 |
| MS.gene76365.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.61e-26 | 105 |
| MS.gene76365.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.77e-26 | 105 |
| MS.gene76365.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.87e-26 | 105 |
| MS.gene76365.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.91e-26 | 105 |
| MS.gene76365.t1 | AT1G10450 | 61.250 | 80 | 29 | 1 | 3 | 82 | 67 | 144 | 1.43e-25 | 103 |
| MS.gene76365.t1 | AT1G10450 | 61.250 | 80 | 29 | 1 | 3 | 82 | 67 | 144 | 1.43e-25 | 103 |
| MS.gene76365.t1 | AT1G10450 | 61.250 | 80 | 29 | 1 | 3 | 82 | 118 | 195 | 1.46e-25 | 103 |
| MS.gene76365.t1 | AT1G24200 | 57.500 | 80 | 31 | 1 | 3 | 82 | 48 | 124 | 3.00e-22 | 89.0 |
| MS.gene76365.t1 | AT1G70030 | 53.947 | 76 | 33 | 2 | 8 | 83 | 50 | 123 | 1.11e-17 | 76.3 |
| MS.gene76365.t1 | AT5G35610 | 35.965 | 114 | 58 | 3 | 3 | 105 | 44 | 153 | 1.98e-13 | 65.1 |
| MS.gene76365.t1 | AT1G70030 | 50.000 | 72 | 33 | 2 | 8 | 77 | 61 | 131 | 1.89e-12 | 62.0 |
| MS.gene76365.t1 | AT1G70030 | 56.140 | 57 | 24 | 1 | 8 | 64 | 61 | 116 | 3.63e-12 | 60.8 |
Find 45 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGTTTACAAGTCATTTA+TGG | 0.140196 | 8.1:-29829928 | MS.gene76365:CDS |
| CTCATGGCCCTTTGGCAAAA+AGG | 0.248205 | 8.1:+29830160 | None:intergenic |
| CAAGAAGATCCGGGTGGTTT+TGG | 0.249415 | 8.1:+29829725 | None:intergenic |
| TTCATCTGTGTCGTGTTGAT+TGG | 0.378078 | 8.1:-29829693 | MS.gene76365:CDS |
| AAGTTAACCATTACTTTATG+AGG | 0.408474 | 8.1:-29829491 | MS.gene76365:CDS |
| TTGTATGAGTGCACTGCAAA+GGG | 0.421632 | 8.1:+29829562 | None:intergenic |
| TCGTGTTGATTGGCGGTGAC+TGG | 0.441416 | 8.1:-29829683 | MS.gene76365:CDS |
| GAGTTATGTGAACACGATAA+AGG | 0.446913 | 8.1:-29830072 | MS.gene76365:intron |
| AGGGTAATCTCATGGCCCTT+TGG | 0.451315 | 8.1:+29830152 | None:intergenic |
| ACTCGGCATCAGTGGGGAAG+GGG | 0.451431 | 8.1:-29829613 | MS.gene76365:CDS |
| ACTGCAAAGGGGTATGTCTC+AGG | 0.456330 | 8.1:+29829574 | None:intergenic |
| AACCACCCGGATCTTCTTGA+AGG | 0.457397 | 8.1:-29829721 | MS.gene76365:CDS |
| TGGTTGAGGTTGCTCATCCT+CGG | 0.459938 | 8.1:+29830124 | None:intergenic |
| CAGGTACTTTCCCTCTTGGT+AGG | 0.460534 | 8.1:+29829465 | None:intergenic |
| GGTCATAGAGACTTGATCTT+GGG | 0.467943 | 8.1:-29830191 | MS.gene76365:CDS |
| ACATCAGGTACTTTCCCTCT+TGG | 0.471918 | 8.1:+29829461 | None:intergenic |
| ATAAACCCTTCAAGAAGATC+CGG | 0.477187 | 8.1:+29829715 | None:intergenic |
| TTTATGCAGACTCGGTTTCA+GGG | 0.487740 | 8.1:-29829957 | MS.gene76365:intron |
| AAACTCGGCATCAGTGGGGA+AGG | 0.492373 | 8.1:-29829615 | MS.gene76365:CDS |
| CTATAAAACTCGGCATCAGT+GGG | 0.502922 | 8.1:-29829620 | MS.gene76365:CDS |
| AGGTACTTTCCCTCTTGGTA+GGG | 0.505190 | 8.1:+29829466 | None:intergenic |
| GCTATAAAACTCGGCATCAG+TGG | 0.506265 | 8.1:-29829621 | MS.gene76365:CDS |
| ATCTGTGTCGTGTTGATTGG+CGG | 0.509936 | 8.1:-29829690 | MS.gene76365:CDS |
| AGGTCATAGAGACTTGATCT+TGG | 0.513611 | 8.1:-29830192 | MS.gene76365:CDS |
| CTCGGCATCAGTGGGGAAGG+GGG | 0.515169 | 8.1:-29829612 | MS.gene76365:CDS |
| AACTCGGCATCAGTGGGGAA+GGG | 0.528339 | 8.1:-29829614 | MS.gene76365:CDS |
| TTGCTCATCCTCGGACGAAA+GGG | 0.539598 | 8.1:+29830133 | None:intergenic |
| CTTGTATGAGTGCACTGCAA+AGG | 0.547650 | 8.1:+29829561 | None:intergenic |
| GTTGCTCATCCTCGGACGAA+AGG | 0.549267 | 8.1:+29830132 | None:intergenic |
| ACCACCCGGATCTTCTTGAA+GGG | 0.554045 | 8.1:-29829720 | MS.gene76365:CDS |
| TATATTCATCCTTCGAGCAA+TGG | 0.563072 | 8.1:-29829537 | MS.gene76365:CDS |
| CGGACGAAAGGGTAATCTCA+TGG | 0.581909 | 8.1:+29830144 | None:intergenic |
| TGAGATTACCCTTTCGTCCG+AGG | 0.584557 | 8.1:-29830141 | MS.gene76365:CDS |
| TAAACCCTTCAAGAAGATCC+GGG | 0.599628 | 8.1:+29829716 | None:intergenic |
| TGCATTCTTCCAAAACCACC+CGG | 0.599692 | 8.1:-29829734 | MS.gene76365:CDS |
| GTTGGTCATGCTATAAAACT+CGG | 0.605058 | 8.1:-29829630 | MS.gene76365:CDS |
| TCATTGACACCATTGCTCGA+AGG | 0.620805 | 8.1:+29829528 | None:intergenic |
| TAGGGCACCTCATAAAGTAA+TGG | 0.626853 | 8.1:+29829484 | None:intergenic |
| ATTTGTAGAGTTGATACTGA+TGG | 0.633224 | 8.1:-29830245 | MS.gene76365:intron |
| TATGAGGTGCCCTACCAAGA+GGG | 0.635144 | 8.1:-29829475 | MS.gene76365:CDS |
| TTATGAGGTGCCCTACCAAG+AGG | 0.660657 | 8.1:-29829476 | MS.gene76365:CDS |
| TGGTGTCATTGAAAGAGTGA+AGG | 0.685356 | 8.1:-29830225 | MS.gene76365:CDS |
| TGTATGAGTGCACTGCAAAG+GGG | 0.718580 | 8.1:+29829563 | None:intergenic |
| ACCCTTCAAGAAGATCCGGG+TGG | 0.747614 | 8.1:+29829719 | None:intergenic |
| TATAAAACTCGGCATCAGTG+GGG | 0.747744 | 8.1:-29829619 | MS.gene76365:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTGTTTTTGTATATATATT+GGG | - | chr8.1:29829476-29829495 | MS.gene76365:CDS | 15.0% |
| !! | ATATATATACAAAAACAACG+TGG | + | chr8.1:29829475-29829494 | None:intergenic | 20.0% |
| !!! | AATTGATTTGTTTATCCTTT+TGG | - | chr8.1:29829525-29829544 | MS.gene76365:CDS | 20.0% |
| !!! | CGTTGTTTTTGTATATATAT+TGG | - | chr8.1:29829475-29829494 | MS.gene76365:CDS | 20.0% |
| !!! | TAAAATTCAACCTTCTTTTT+TGG | + | chr8.1:29829695-29829714 | None:intergenic | 20.0% |
| ! | AAGTTAACCATTACTTTATG+AGG | - | chr8.1:29830305-29830324 | MS.gene76365:intron | 25.0% |
| ! | TAGAATGTTTGTGAGTTTAA+TGG | - | chr8.1:29829748-29829767 | MS.gene76365:intron | 25.0% |
| ! | TCATGTTTACAAGTCATTTA+TGG | - | chr8.1:29829868-29829887 | MS.gene76365:intron | 25.0% |
| ! | TTTGTATATATATTGGGAGA+GGG | - | chr8.1:29829482-29829501 | MS.gene76365:CDS | 25.0% |
| !! | TTTTGTATATATATTGGGAG+AGG | - | chr8.1:29829481-29829500 | MS.gene76365:CDS | 25.0% |
| !!! | AGTTTTAGTTTTGAGCTTAA+TGG | - | chr8.1:29829810-29829829 | MS.gene76365:intron | 25.0% |
| CATATTGAATACGTACAGAA+AGG | - | chr8.1:29829892-29829911 | MS.gene76365:intron | 30.0% | |
| ! | ATTTAACACCTTTTTGCCAA+AGG | - | chr8.1:29829628-29829647 | MS.gene76365:CDS | 30.0% |
| ! | TTTAACACCTTTTTGCCAAA+GGG | - | chr8.1:29829629-29829648 | MS.gene76365:CDS | 30.0% |
| !! | ATTTGTAGAGTTGATACTGA+TGG | - | chr8.1:29829551-29829570 | MS.gene76365:CDS | 30.0% |
| AACTCTACAAATGCACCAAA+AGG | + | chr8.1:29829543-29829562 | None:intergenic | 35.0% | |
| ATAAACCCTTCAAGAAGATC+CGG | + | chr8.1:29830084-29830103 | None:intergenic | 35.0% | |
| GAGTTATGTGAACACGATAA+AGG | - | chr8.1:29829724-29829743 | MS.gene76365:CDS | 35.0% | |
| GTCAGGAAAATCTGTAATGT+TGG | - | chr8.1:29829962-29829981 | MS.gene76365:intron | 35.0% | |
| GTTGGTCATGCTATAAAACT+CGG | - | chr8.1:29830166-29830185 | MS.gene76365:CDS | 35.0% | |
| TATATTCATCCTTCGAGCAA+TGG | - | chr8.1:29830259-29830278 | MS.gene76365:intron | 35.0% | |
| ! | AGAGTGAAGGAACTTTTTAG+AGG | - | chr8.1:29829584-29829603 | MS.gene76365:CDS | 35.0% |
| !!! | TCAACCTTCTTTTTTGGTTG+AGG | + | chr8.1:29829689-29829708 | None:intergenic | 35.0% |
| AATCATGATTGCACTTCTCC+AGG | - | chr8.1:29830035-29830054 | MS.gene76365:intron | 40.0% | |
| ACATACCTCTTTGTAGACCA+GGG | + | chr8.1:29829933-29829952 | None:intergenic | 40.0% | |
| AGGTCATAGAGACTTGATCT+TGG | - | chr8.1:29829604-29829623 | MS.gene76365:CDS | 40.0% | |
| CACAGCAATATGTCAAGTAC+TGG | + | chr8.1:29830004-29830023 | None:intergenic | 40.0% | |
| CTATAAAACTCGGCATCAGT+GGG | - | chr8.1:29830176-29830195 | MS.gene76365:CDS | 40.0% | |
| GAAACCGAGTCTGCATAAAA+AGG | + | chr8.1:29829838-29829857 | None:intergenic | 40.0% | |
| GCAACCTCAACCAAAAAAGA+AGG | - | chr8.1:29829682-29829701 | MS.gene76365:CDS | 40.0% | |
| GGTCATAGAGACTTGATCTT+GGG | - | chr8.1:29829605-29829624 | MS.gene76365:CDS | 40.0% | |
| TAAACCCTTCAAGAAGATCC+GGG | + | chr8.1:29830083-29830102 | None:intergenic | 40.0% | |
| TATAAAACTCGGCATCAGTG+GGG | - | chr8.1:29830177-29830196 | MS.gene76365:CDS | 40.0% | |
| TTGTATGAGTGCACTGCAAA+GGG | + | chr8.1:29830237-29830256 | None:intergenic | 40.0% | |
| ! | AGGTATGTGCTGTTATAGTC+AGG | - | chr8.1:29829945-29829964 | MS.gene76365:CDS | 40.0% |
| ! | GGTTCCTTTTTATGCAGACT+CGG | - | chr8.1:29829831-29829850 | MS.gene76365:intron | 40.0% |
| ! | GTGTTGCGTAATTTTCGTGT+TGG | - | chr8.1:29830148-29830167 | MS.gene76365:CDS | 40.0% |
| ! | TAGGGCACCTCATAAAGTAA+TGG | + | chr8.1:29830315-29830334 | None:intergenic | 40.0% |
| ! | TTCATCTGTGTCGTGTTGAT+TGG | - | chr8.1:29830103-29830122 | MS.gene76365:CDS | 40.0% |
| ! | TTTATGCAGACTCGGTTTCA+GGG | - | chr8.1:29829839-29829858 | MS.gene76365:intron | 40.0% |
| !! | AGCAATATGTCAAGTACTGG+AGG | + | chr8.1:29830001-29830020 | None:intergenic | 40.0% |
| !! | TGGTGTCATTGAAAGAGTGA+AGG | - | chr8.1:29829571-29829590 | MS.gene76365:CDS | 40.0% |
| !! | TTTTATGCAGACTCGGTTTC+AGG | - | chr8.1:29829838-29829857 | MS.gene76365:intron | 40.0% |
| AGGTACTTTCCCTCTTGGTA+GGG | + | chr8.1:29830333-29830352 | None:intergenic | 45.0% | |
| CACATACCTCTTTGTAGACC+AGG | + | chr8.1:29829934-29829953 | None:intergenic | 45.0% | |
| CTTGTATGAGTGCACTGCAA+AGG | + | chr8.1:29830238-29830257 | None:intergenic | 45.0% | |
| GCTATAAAACTCGGCATCAG+TGG | - | chr8.1:29830175-29830194 | MS.gene76365:CDS | 45.0% | |
| TATCACCCTGGTCTACAAAG+AGG | - | chr8.1:29829925-29829944 | MS.gene76365:CDS | 45.0% | |
| TCATTGACACCATTGCTCGA+AGG | + | chr8.1:29830271-29830290 | None:intergenic | 45.0% | |
| TCTTTGTAGACCAGGGTGAT+AGG | + | chr8.1:29829926-29829945 | None:intergenic | 45.0% | |
| TGCATTCTTCCAAAACCACC+CGG | - | chr8.1:29830062-29830081 | MS.gene76365:intron | 45.0% | |
| TGTATGAGTGCACTGCAAAG+GGG | + | chr8.1:29830236-29830255 | None:intergenic | 45.0% | |
| TTTGGAAGAATGCAGCAACC+TGG | + | chr8.1:29830056-29830075 | None:intergenic | 45.0% | |
| !! | ATCTGTGTCGTGTTGATTGG+CGG | - | chr8.1:29830106-29830125 | MS.gene76365:CDS | 45.0% |
| AACCACCCGGATCTTCTTGA+AGG | - | chr8.1:29830075-29830094 | MS.gene76365:CDS | 50.0% | |
| ACCACCCGGATCTTCTTGAA+GGG | - | chr8.1:29830076-29830095 | MS.gene76365:CDS | 50.0% | |
| AGGGTAATCTCATGGCCCTT+TGG | + | chr8.1:29829647-29829666 | None:intergenic | 50.0% | |
| CAGGTACTTTCCCTCTTGGT+AGG | + | chr8.1:29830334-29830353 | None:intergenic | 50.0% | |
| CGGACGAAAGGGTAATCTCA+TGG | + | chr8.1:29829655-29829674 | None:intergenic | 50.0% | |
| CTCATGGCCCTTTGGCAAAA+AGG | + | chr8.1:29829639-29829658 | None:intergenic | 50.0% | |
| GGAAAGTAAGCCTATCACCC+TGG | - | chr8.1:29829913-29829932 | MS.gene76365:intron | 50.0% | |
| TGAGATTACCCTTTCGTCCG+AGG | - | chr8.1:29829655-29829674 | MS.gene76365:CDS | 50.0% | |
| TGGTTGAGGTTGCTCATCCT+CGG | + | chr8.1:29829675-29829694 | None:intergenic | 50.0% | |
| TTGCTCATCCTCGGACGAAA+GGG | + | chr8.1:29829666-29829685 | None:intergenic | 50.0% | |
| ! | ACTGCAAAGGGGTATGTCTC+AGG | + | chr8.1:29830225-29830244 | None:intergenic | 50.0% |
| ! | CAAGAAGATCCGGGTGGTTT+TGG | + | chr8.1:29830074-29830093 | None:intergenic | 50.0% |
| ! | TATGAGGTGCCCTACCAAGA+GGG | - | chr8.1:29830321-29830340 | MS.gene76365:intron | 50.0% |
| ! | TTATGAGGTGCCCTACCAAG+AGG | - | chr8.1:29830320-29830339 | MS.gene76365:intron | 50.0% |
| AAACTCGGCATCAGTGGGGA+AGG | - | chr8.1:29830181-29830200 | MS.gene76365:CDS | 55.0% | |
| AACTCGGCATCAGTGGGGAA+GGG | - | chr8.1:29830182-29830201 | MS.gene76365:CDS | 55.0% | |
| ACCCTTCAAGAAGATCCGGG+TGG | + | chr8.1:29830080-29830099 | None:intergenic | 55.0% | |
| GTTGCTCATCCTCGGACGAA+AGG | + | chr8.1:29829667-29829686 | None:intergenic | 55.0% | |
| !! | TCGTGTTGATTGGCGGTGAC+TGG | - | chr8.1:29830113-29830132 | MS.gene76365:CDS | 55.0% |
| ACTCGGCATCAGTGGGGAAG+GGG | - | chr8.1:29830183-29830202 | MS.gene76365:CDS | 60.0% | |
| CTCGGCATCAGTGGGGAAGG+GGG | - | chr8.1:29830184-29830203 | MS.gene76365:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 29829464 | 29830354 | 29829464 | ID=MS.gene76365 |
| chr8.1 | mRNA | 29829464 | 29830354 | 29829464 | ID=MS.gene76365.t1;Parent=MS.gene76365 |
| chr8.1 | exon | 29830350 | 29830354 | 29830350 | ID=MS.gene76365.t1.exon1;Parent=MS.gene76365.t1 |
| chr8.1 | CDS | 29830350 | 29830354 | 29830350 | ID=cds.MS.gene76365.t1;Parent=MS.gene76365.t1 |
| chr8.1 | exon | 29830073 | 29830259 | 29830073 | ID=MS.gene76365.t1.exon2;Parent=MS.gene76365.t1 |
| chr8.1 | CDS | 29830073 | 29830259 | 29830073 | ID=cds.MS.gene76365.t1;Parent=MS.gene76365.t1 |
| chr8.1 | exon | 29829915 | 29829970 | 29829915 | ID=MS.gene76365.t1.exon3;Parent=MS.gene76365.t1 |
| chr8.1 | CDS | 29829915 | 29829970 | 29829915 | ID=cds.MS.gene76365.t1;Parent=MS.gene76365.t1 |
| chr8.1 | exon | 29829464 | 29829761 | 29829464 | ID=MS.gene76365.t1.exon4;Parent=MS.gene76365.t1 |
| chr8.1 | CDS | 29829464 | 29829761 | 29829464 | ID=cds.MS.gene76365.t1;Parent=MS.gene76365.t1 |
| Gene Sequence |
| Protein sequence |
