Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76368.t1 | XP_003613438.2 | 86.2 | 94 | 13 | 0 | 3 | 96 | 77 | 170 | 6.10E-37 | 164.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76368.t1 | O48686 | 71.6 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 4.4e-28 | 125.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76368.t1 | G7K6W4 | 86.2 | 94 | 13 | 0 | 3 | 96 | 77 | 170 | 4.4e-37 | 164.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene76368.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051262 | MS.gene76368 | 0.855145 | 7.68E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76368.t1 | MTR_5g036670 | 86.170 | 94 | 13 | 0 | 3 | 96 | 77 | 170 | 1.41e-47 | 166 |
| MS.gene76368.t1 | MTR_8g062700 | 71.250 | 80 | 23 | 0 | 3 | 82 | 76 | 155 | 7.45e-32 | 120 |
| MS.gene76368.t1 | MTR_8g062700 | 71.250 | 80 | 23 | 0 | 3 | 82 | 76 | 155 | 7.52e-32 | 120 |
| MS.gene76368.t1 | MTR_6g008970 | 64.773 | 88 | 31 | 0 | 3 | 90 | 97 | 184 | 1.22e-30 | 117 |
| MS.gene76368.t1 | MTR_6g008995 | 63.636 | 88 | 30 | 2 | 3 | 90 | 14 | 99 | 2.85e-27 | 106 |
| MS.gene76368.t1 | MTR_6g008995 | 63.636 | 88 | 30 | 2 | 3 | 90 | 71 | 156 | 4.46e-27 | 106 |
| MS.gene76368.t1 | MTR_1g023820 | 100.000 | 36 | 0 | 0 | 3 | 38 | 21 | 56 | 3.33e-19 | 79.3 |
| MS.gene76368.t1 | MTR_7g013410 | 41.935 | 93 | 43 | 3 | 3 | 92 | 32 | 116 | 9.87e-16 | 70.5 |
| MS.gene76368.t1 | MTR_8g062350 | 32.374 | 139 | 52 | 4 | 8 | 107 | 53 | 188 | 1.14e-13 | 66.6 |
| MS.gene76368.t1 | MTR_1g105955 | 44.872 | 78 | 36 | 2 | 1 | 78 | 48 | 118 | 1.18e-12 | 63.5 |
| MS.gene76368.t1 | MTR_0091s0080 | 34.066 | 91 | 56 | 2 | 89 | 179 | 387 | 473 | 4.33e-12 | 63.9 |
| MS.gene76368.t1 | MTR_1g105960 | 56.818 | 44 | 19 | 0 | 3 | 46 | 35 | 78 | 5.65e-12 | 60.1 |
| MS.gene76368.t1 | MTR_4g133300 | 36.905 | 84 | 47 | 1 | 3 | 86 | 43 | 120 | 3.57e-11 | 60.5 |
| MS.gene76368.t1 | MTR_4g133470 | 38.750 | 80 | 43 | 1 | 3 | 82 | 43 | 116 | 3.91e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76368.t1 | AT1G70060 | 70.787 | 89 | 25 | 1 | 3 | 90 | 48 | 136 | 3.57e-34 | 127 |
| MS.gene76368.t1 | AT1G70060 | 70.787 | 89 | 25 | 1 | 3 | 90 | 48 | 136 | 3.57e-34 | 127 |
| MS.gene76368.t1 | AT1G24190 | 71.591 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 9.96e-34 | 126 |
| MS.gene76368.t1 | AT1G24190 | 71.591 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 1.02e-33 | 126 |
| MS.gene76368.t1 | AT1G24190 | 71.591 | 88 | 25 | 0 | 3 | 90 | 48 | 135 | 1.06e-33 | 126 |
| MS.gene76368.t1 | AT3G01320 | 60.000 | 90 | 35 | 1 | 3 | 92 | 91 | 179 | 1.02e-26 | 106 |
| MS.gene76368.t1 | AT5G15020 | 62.791 | 86 | 30 | 1 | 4 | 89 | 87 | 170 | 1.05e-26 | 106 |
| MS.gene76368.t1 | AT5G15020 | 62.791 | 86 | 30 | 1 | 4 | 89 | 87 | 170 | 1.05e-26 | 106 |
| MS.gene76368.t1 | AT3G01320 | 60.000 | 90 | 35 | 1 | 3 | 92 | 91 | 179 | 1.05e-26 | 106 |
| MS.gene76368.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.61e-26 | 105 |
| MS.gene76368.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.77e-26 | 105 |
| MS.gene76368.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.87e-26 | 105 |
| MS.gene76368.t1 | AT1G59890 | 59.091 | 88 | 34 | 1 | 3 | 90 | 79 | 164 | 2.91e-26 | 105 |
| MS.gene76368.t1 | AT1G10450 | 61.250 | 80 | 29 | 1 | 3 | 82 | 67 | 144 | 1.43e-25 | 103 |
| MS.gene76368.t1 | AT1G10450 | 61.250 | 80 | 29 | 1 | 3 | 82 | 67 | 144 | 1.43e-25 | 103 |
| MS.gene76368.t1 | AT1G10450 | 61.250 | 80 | 29 | 1 | 3 | 82 | 118 | 195 | 1.46e-25 | 103 |
| MS.gene76368.t1 | AT1G24200 | 57.500 | 80 | 31 | 1 | 3 | 82 | 48 | 124 | 3.00e-22 | 89.0 |
| MS.gene76368.t1 | AT1G70030 | 53.947 | 76 | 33 | 2 | 8 | 83 | 50 | 123 | 1.11e-17 | 76.3 |
| MS.gene76368.t1 | AT5G35610 | 35.965 | 114 | 58 | 3 | 3 | 105 | 44 | 153 | 1.98e-13 | 65.1 |
| MS.gene76368.t1 | AT1G70030 | 50.000 | 72 | 33 | 2 | 8 | 77 | 61 | 131 | 1.89e-12 | 62.0 |
| MS.gene76368.t1 | AT1G70030 | 56.140 | 57 | 24 | 1 | 8 | 64 | 61 | 116 | 3.63e-12 | 60.8 |
Find 45 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGTTTACAAGTCATTTA+TGG | 0.140196 | 8.1:+29852937 | MS.gene76368:CDS |
| CTCATGGCCCTTTGGCAAAA+AGG | 0.248205 | 8.1:-29852705 | None:intergenic |
| CAAGAAGATCCGGGTGGTTT+TGG | 0.249415 | 8.1:-29853141 | None:intergenic |
| TTCATCTGTGTCGTGTTGAT+TGG | 0.378078 | 8.1:+29853173 | MS.gene76368:CDS |
| AAGTTAACCATTACTTTATG+AGG | 0.408474 | 8.1:+29853375 | MS.gene76368:CDS |
| TTGTATGAGTGCACTGCAAA+GGG | 0.421632 | 8.1:-29853304 | None:intergenic |
| TCGTGTTGATTGGCGGTGAC+TGG | 0.441416 | 8.1:+29853183 | MS.gene76368:CDS |
| GAGTTATGTGAACACGATAA+AGG | 0.446913 | 8.1:+29852793 | MS.gene76368:CDS |
| AGGGTAATCTCATGGCCCTT+TGG | 0.451315 | 8.1:-29852713 | None:intergenic |
| ACTCGGCATCAGTGGGGAAG+GGG | 0.451431 | 8.1:+29853253 | MS.gene76368:CDS |
| ACTGCAAAGGGGTATGTCTC+AGG | 0.456330 | 8.1:-29853292 | None:intergenic |
| AACCACCCGGATCTTCTTGA+AGG | 0.457397 | 8.1:+29853145 | MS.gene76368:CDS |
| TGGTTGAGGTTGCTCATCCT+CGG | 0.459938 | 8.1:-29852741 | None:intergenic |
| CAGGTACTTTCCCTCTTGGT+AGG | 0.460534 | 8.1:-29853401 | None:intergenic |
| GGTCATAGAGACTTGATCTT+GGG | 0.467943 | 8.1:+29852674 | MS.gene76368:CDS |
| ACATCAGGTACTTTCCCTCT+TGG | 0.471918 | 8.1:-29853405 | None:intergenic |
| ATAAACCCTTCAAGAAGATC+CGG | 0.477187 | 8.1:-29853151 | None:intergenic |
| TTTATGCAGACTCGGTTTCA+GGG | 0.487740 | 8.1:+29852908 | MS.gene76368:intron |
| AAACTCGGCATCAGTGGGGA+AGG | 0.492373 | 8.1:+29853251 | MS.gene76368:CDS |
| CTATAAAACTCGGCATCAGT+GGG | 0.502922 | 8.1:+29853246 | MS.gene76368:CDS |
| AGGTACTTTCCCTCTTGGTA+GGG | 0.505190 | 8.1:-29853400 | None:intergenic |
| GCTATAAAACTCGGCATCAG+TGG | 0.506265 | 8.1:+29853245 | MS.gene76368:CDS |
| ATCTGTGTCGTGTTGATTGG+CGG | 0.509936 | 8.1:+29853176 | MS.gene76368:CDS |
| AGGTCATAGAGACTTGATCT+TGG | 0.513611 | 8.1:+29852673 | MS.gene76368:CDS |
| CTCGGCATCAGTGGGGAAGG+GGG | 0.515169 | 8.1:+29853254 | MS.gene76368:CDS |
| AACTCGGCATCAGTGGGGAA+GGG | 0.528339 | 8.1:+29853252 | MS.gene76368:CDS |
| TTGCTCATCCTCGGACGAAA+GGG | 0.539598 | 8.1:-29852732 | None:intergenic |
| CTTGTATGAGTGCACTGCAA+AGG | 0.547650 | 8.1:-29853305 | None:intergenic |
| GTTGCTCATCCTCGGACGAA+AGG | 0.549267 | 8.1:-29852733 | None:intergenic |
| ACCACCCGGATCTTCTTGAA+GGG | 0.554045 | 8.1:+29853146 | MS.gene76368:CDS |
| TATATTCATCCTTCGAGCAA+TGG | 0.563072 | 8.1:+29853329 | MS.gene76368:CDS |
| CGGACGAAAGGGTAATCTCA+TGG | 0.581909 | 8.1:-29852721 | None:intergenic |
| TGAGATTACCCTTTCGTCCG+AGG | 0.584557 | 8.1:+29852724 | MS.gene76368:CDS |
| TAAACCCTTCAAGAAGATCC+GGG | 0.599628 | 8.1:-29853150 | None:intergenic |
| TGCATTCTTCCAAAACCACC+CGG | 0.599692 | 8.1:+29853132 | MS.gene76368:CDS |
| GTTGGTCATGCTATAAAACT+CGG | 0.605058 | 8.1:+29853236 | MS.gene76368:CDS |
| TCATTGACACCATTGCTCGA+AGG | 0.620805 | 8.1:-29853338 | None:intergenic |
| TAGGGCACCTCATAAAGTAA+TGG | 0.626853 | 8.1:-29853382 | None:intergenic |
| ATTTGTAGAGTTGATACTGA+TGG | 0.633224 | 8.1:+29852620 | MS.gene76368:intron |
| TATGAGGTGCCCTACCAAGA+GGG | 0.635144 | 8.1:+29853391 | MS.gene76368:CDS |
| TTATGAGGTGCCCTACCAAG+AGG | 0.660657 | 8.1:+29853390 | MS.gene76368:CDS |
| TGGTGTCATTGAAAGAGTGA+AGG | 0.685356 | 8.1:+29852640 | MS.gene76368:CDS |
| TGTATGAGTGCACTGCAAAG+GGG | 0.718580 | 8.1:-29853303 | None:intergenic |
| ACCCTTCAAGAAGATCCGGG+TGG | 0.747614 | 8.1:-29853147 | None:intergenic |
| TATAAAACTCGGCATCAGTG+GGG | 0.747744 | 8.1:+29853247 | MS.gene76368:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTGTTTTTGTATATATATT+GGG | + | chr8.1:29852545-29852564 | MS.gene76368:intron | 15.0% |
| !! | ATATATATACAAAAACAACG+TGG | - | chr8.1:29852544-29852563 | None:intergenic | 20.0% |
| !!! | AATTGATTTGTTTATCCTTT+TGG | + | chr8.1:29852594-29852613 | MS.gene76368:intron | 20.0% |
| !!! | CGTTGTTTTTGTATATATAT+TGG | + | chr8.1:29852544-29852563 | MS.gene76368:intron | 20.0% |
| !!! | TAAAATTCAACCTTCTTTTT+TGG | - | chr8.1:29852764-29852783 | None:intergenic | 20.0% |
| ! | AAGTTAACCATTACTTTATG+AGG | + | chr8.1:29853375-29853394 | MS.gene76368:CDS | 25.0% |
| ! | TAGAATGTTTGTGAGTTTAA+TGG | + | chr8.1:29852817-29852836 | MS.gene76368:intron | 25.0% |
| ! | TCATGTTTACAAGTCATTTA+TGG | + | chr8.1:29852937-29852956 | MS.gene76368:CDS | 25.0% |
| ! | TTTGTATATATATTGGGAGA+GGG | + | chr8.1:29852551-29852570 | MS.gene76368:intron | 25.0% |
| !! | TTTTGTATATATATTGGGAG+AGG | + | chr8.1:29852550-29852569 | MS.gene76368:intron | 25.0% |
| !!! | AGTTTTAGTTTTGAGCTTAA+TGG | + | chr8.1:29852879-29852898 | MS.gene76368:intron | 25.0% |
| CATATTGAATACGTACAGAA+AGG | + | chr8.1:29852961-29852980 | MS.gene76368:intron | 30.0% | |
| ! | ATTTAACACCTTTTTGCCAA+AGG | + | chr8.1:29852697-29852716 | MS.gene76368:CDS | 30.0% |
| ! | TTTAACACCTTTTTGCCAAA+GGG | + | chr8.1:29852698-29852717 | MS.gene76368:CDS | 30.0% |
| !! | ATTTGTAGAGTTGATACTGA+TGG | + | chr8.1:29852620-29852639 | MS.gene76368:intron | 30.0% |
| AACTCTACAAATGCACCAAA+AGG | - | chr8.1:29852612-29852631 | None:intergenic | 35.0% | |
| ATAAACCCTTCAAGAAGATC+CGG | - | chr8.1:29853154-29853173 | None:intergenic | 35.0% | |
| GAGTTATGTGAACACGATAA+AGG | + | chr8.1:29852793-29852812 | MS.gene76368:CDS | 35.0% | |
| GTCAGGAAAATCTGTAATGT+TGG | + | chr8.1:29853031-29853050 | MS.gene76368:intron | 35.0% | |
| GTTGGTCATGCTATAAAACT+CGG | + | chr8.1:29853236-29853255 | MS.gene76368:CDS | 35.0% | |
| TATATTCATCCTTCGAGCAA+TGG | + | chr8.1:29853329-29853348 | MS.gene76368:CDS | 35.0% | |
| ! | AGAGTGAAGGAACTTTTTAG+AGG | + | chr8.1:29852653-29852672 | MS.gene76368:CDS | 35.0% |
| !!! | TCAACCTTCTTTTTTGGTTG+AGG | - | chr8.1:29852758-29852777 | None:intergenic | 35.0% |
| AATCATGATTGCACTTCTCC+AGG | + | chr8.1:29853105-29853124 | MS.gene76368:intron | 40.0% | |
| ACATACCTCTTTGTAGACCA+GGG | - | chr8.1:29853002-29853021 | None:intergenic | 40.0% | |
| AGGTCATAGAGACTTGATCT+TGG | + | chr8.1:29852673-29852692 | MS.gene76368:CDS | 40.0% | |
| CACAGCAATATGTCAAGTAC+TGG | - | chr8.1:29853074-29853093 | None:intergenic | 40.0% | |
| CTATAAAACTCGGCATCAGT+GGG | + | chr8.1:29853246-29853265 | MS.gene76368:CDS | 40.0% | |
| GAAACCGAGTCTGCATAAAA+AGG | - | chr8.1:29852907-29852926 | None:intergenic | 40.0% | |
| GCAACCTCAACCAAAAAAGA+AGG | + | chr8.1:29852751-29852770 | MS.gene76368:CDS | 40.0% | |
| GGTCATAGAGACTTGATCTT+GGG | + | chr8.1:29852674-29852693 | MS.gene76368:CDS | 40.0% | |
| TAAACCCTTCAAGAAGATCC+GGG | - | chr8.1:29853153-29853172 | None:intergenic | 40.0% | |
| TATAAAACTCGGCATCAGTG+GGG | + | chr8.1:29853247-29853266 | MS.gene76368:CDS | 40.0% | |
| TTGTATGAGTGCACTGCAAA+GGG | - | chr8.1:29853307-29853326 | None:intergenic | 40.0% | |
| ! | AGGTATGTGCTGTTATAGTC+AGG | + | chr8.1:29853014-29853033 | MS.gene76368:intron | 40.0% |
| ! | GGTTCCTTTTTATGCAGACT+CGG | + | chr8.1:29852900-29852919 | MS.gene76368:intron | 40.0% |
| ! | GTGTTGCGTAATTTTCGTGT+TGG | + | chr8.1:29853218-29853237 | MS.gene76368:CDS | 40.0% |
| ! | TAGGGCACCTCATAAAGTAA+TGG | - | chr8.1:29853385-29853404 | None:intergenic | 40.0% |
| ! | TTCATCTGTGTCGTGTTGAT+TGG | + | chr8.1:29853173-29853192 | MS.gene76368:CDS | 40.0% |
| ! | TTTATGCAGACTCGGTTTCA+GGG | + | chr8.1:29852908-29852927 | MS.gene76368:intron | 40.0% |
| !! | AGCAATATGTCAAGTACTGG+AGG | - | chr8.1:29853071-29853090 | None:intergenic | 40.0% |
| !! | TGGTGTCATTGAAAGAGTGA+AGG | + | chr8.1:29852640-29852659 | MS.gene76368:CDS | 40.0% |
| !! | TTTTATGCAGACTCGGTTTC+AGG | + | chr8.1:29852907-29852926 | MS.gene76368:intron | 40.0% |
| AGGTACTTTCCCTCTTGGTA+GGG | - | chr8.1:29853403-29853422 | None:intergenic | 45.0% | |
| CACATACCTCTTTGTAGACC+AGG | - | chr8.1:29853003-29853022 | None:intergenic | 45.0% | |
| CTTGTATGAGTGCACTGCAA+AGG | - | chr8.1:29853308-29853327 | None:intergenic | 45.0% | |
| GCTATAAAACTCGGCATCAG+TGG | + | chr8.1:29853245-29853264 | MS.gene76368:CDS | 45.0% | |
| TATCACCCTGGTCTACAAAG+AGG | + | chr8.1:29852994-29853013 | MS.gene76368:intron | 45.0% | |
| TCATTGACACCATTGCTCGA+AGG | - | chr8.1:29853341-29853360 | None:intergenic | 45.0% | |
| TCTTTGTAGACCAGGGTGAT+AGG | - | chr8.1:29852995-29853014 | None:intergenic | 45.0% | |
| TGCATTCTTCCAAAACCACC+CGG | + | chr8.1:29853132-29853151 | MS.gene76368:CDS | 45.0% | |
| TGTATGAGTGCACTGCAAAG+GGG | - | chr8.1:29853306-29853325 | None:intergenic | 45.0% | |
| TTTGGAAGAATGCAGCAACC+TGG | - | chr8.1:29853126-29853145 | None:intergenic | 45.0% | |
| !! | ATCTGTGTCGTGTTGATTGG+CGG | + | chr8.1:29853176-29853195 | MS.gene76368:CDS | 45.0% |
| AACCACCCGGATCTTCTTGA+AGG | + | chr8.1:29853145-29853164 | MS.gene76368:CDS | 50.0% | |
| ACCACCCGGATCTTCTTGAA+GGG | + | chr8.1:29853146-29853165 | MS.gene76368:CDS | 50.0% | |
| AGGGTAATCTCATGGCCCTT+TGG | - | chr8.1:29852716-29852735 | None:intergenic | 50.0% | |
| CAGGTACTTTCCCTCTTGGT+AGG | - | chr8.1:29853404-29853423 | None:intergenic | 50.0% | |
| CGGACGAAAGGGTAATCTCA+TGG | - | chr8.1:29852724-29852743 | None:intergenic | 50.0% | |
| CTCATGGCCCTTTGGCAAAA+AGG | - | chr8.1:29852708-29852727 | None:intergenic | 50.0% | |
| GGAAAGTAAGCCTATCACCC+TGG | + | chr8.1:29852982-29853001 | MS.gene76368:intron | 50.0% | |
| TGAGATTACCCTTTCGTCCG+AGG | + | chr8.1:29852724-29852743 | MS.gene76368:CDS | 50.0% | |
| TGGTTGAGGTTGCTCATCCT+CGG | - | chr8.1:29852744-29852763 | None:intergenic | 50.0% | |
| TTGCTCATCCTCGGACGAAA+GGG | - | chr8.1:29852735-29852754 | None:intergenic | 50.0% | |
| ! | ACTGCAAAGGGGTATGTCTC+AGG | - | chr8.1:29853295-29853314 | None:intergenic | 50.0% |
| ! | CAAGAAGATCCGGGTGGTTT+TGG | - | chr8.1:29853144-29853163 | None:intergenic | 50.0% |
| ! | TATGAGGTGCCCTACCAAGA+GGG | + | chr8.1:29853391-29853410 | MS.gene76368:CDS | 50.0% |
| ! | TTATGAGGTGCCCTACCAAG+AGG | + | chr8.1:29853390-29853409 | MS.gene76368:CDS | 50.0% |
| AAACTCGGCATCAGTGGGGA+AGG | + | chr8.1:29853251-29853270 | MS.gene76368:CDS | 55.0% | |
| AACTCGGCATCAGTGGGGAA+GGG | + | chr8.1:29853252-29853271 | MS.gene76368:CDS | 55.0% | |
| ACCCTTCAAGAAGATCCGGG+TGG | - | chr8.1:29853150-29853169 | None:intergenic | 55.0% | |
| GTTGCTCATCCTCGGACGAA+AGG | - | chr8.1:29852736-29852755 | None:intergenic | 55.0% | |
| !! | TCGTGTTGATTGGCGGTGAC+TGG | + | chr8.1:29853183-29853202 | MS.gene76368:CDS | 55.0% |
| ACTCGGCATCAGTGGGGAAG+GGG | + | chr8.1:29853253-29853272 | MS.gene76368:CDS | 60.0% | |
| CTCGGCATCAGTGGGGAAGG+GGG | + | chr8.1:29853254-29853273 | MS.gene76368:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 29852533 | 29853424 | 29852533 | ID=MS.gene76368 |
| chr8.1 | mRNA | 29852533 | 29853424 | 29852533 | ID=MS.gene76368.t1;Parent=MS.gene76368 |
| chr8.1 | exon | 29852533 | 29852537 | 29852533 | ID=MS.gene76368.t1.exon1;Parent=MS.gene76368.t1 |
| chr8.1 | CDS | 29852533 | 29852537 | 29852533 | ID=cds.MS.gene76368.t1;Parent=MS.gene76368.t1 |
| chr8.1 | exon | 29852628 | 29852814 | 29852628 | ID=MS.gene76368.t1.exon2;Parent=MS.gene76368.t1 |
| chr8.1 | CDS | 29852628 | 29852814 | 29852628 | ID=cds.MS.gene76368.t1;Parent=MS.gene76368.t1 |
| chr8.1 | exon | 29852917 | 29852972 | 29852917 | ID=MS.gene76368.t1.exon3;Parent=MS.gene76368.t1 |
| chr8.1 | CDS | 29852917 | 29852972 | 29852917 | ID=cds.MS.gene76368.t1;Parent=MS.gene76368.t1 |
| chr8.1 | exon | 29853127 | 29853424 | 29853127 | ID=MS.gene76368.t1.exon4;Parent=MS.gene76368.t1 |
| chr8.1 | CDS | 29853127 | 29853424 | 29853127 | ID=cds.MS.gene76368.t1;Parent=MS.gene76368.t1 |
| Gene Sequence |
| Protein sequence |
