Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76984.t1 | RHN52042.1 | 99.7 | 319 | 1 | 0 | 1 | 319 | 1 | 319 | 1.20E-168 | 602.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76984.t1 | Q9LVB0 | 52.9 | 223 | 89 | 7 | 56 | 265 | 81 | 300 | 7.1e-45 | 182.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76984.t1 | A0A396HFC3 | 99.7 | 319 | 1 | 0 | 1 | 319 | 1 | 319 | 8.6e-169 | 602.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055251 | MS.gene76984 | 0.803959 | 2.72E-49 | -1.69E-46 |
MS.gene059778 | MS.gene76984 | 0.81195 | 5.42E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76984.t1 | MTR_6g061670 | 99.373 | 319 | 2 | 0 | 1 | 319 | 1 | 319 | 0.0 | 635 |
MS.gene76984.t1 | MTR_6g061670 | 97.806 | 319 | 2 | 1 | 1 | 319 | 1 | 314 | 0.0 | 619 |
MS.gene76984.t1 | MTR_1g076710 | 53.314 | 347 | 118 | 13 | 1 | 321 | 1 | 329 | 2.12e-88 | 268 |
MS.gene76984.t1 | MTR_7g074935 | 41.311 | 351 | 152 | 10 | 1 | 319 | 1 | 329 | 4.37e-52 | 175 |
MS.gene76984.t1 | MTR_6g060670 | 42.529 | 261 | 108 | 9 | 4 | 260 | 83 | 305 | 1.81e-44 | 154 |
MS.gene76984.t1 | MTR_4g101990 | 52.232 | 224 | 88 | 7 | 43 | 258 | 64 | 276 | 2.32e-43 | 152 |
MS.gene76984.t1 | MTR_8g036160 | 47.863 | 234 | 94 | 8 | 43 | 263 | 61 | 279 | 1.35e-40 | 145 |
MS.gene76984.t1 | MTR_1g061530 | 41.026 | 234 | 108 | 6 | 51 | 269 | 65 | 283 | 9.69e-36 | 132 |
MS.gene76984.t1 | MTR_5g010330 | 36.029 | 272 | 139 | 7 | 1 | 253 | 1 | 256 | 3.60e-31 | 119 |
MS.gene76984.t1 | MTR_4g098460 | 45.223 | 157 | 70 | 3 | 127 | 268 | 78 | 233 | 3.27e-30 | 116 |
MS.gene76984.t1 | MTR_7g077120 | 37.931 | 232 | 126 | 4 | 29 | 260 | 74 | 287 | 9.69e-30 | 116 |
MS.gene76984.t1 | MTR_5g011620 | 40.517 | 232 | 102 | 9 | 34 | 256 | 32 | 236 | 1.84e-28 | 115 |
MS.gene76984.t1 | MTR_5g011680 | 36.398 | 261 | 129 | 7 | 34 | 265 | 32 | 284 | 5.90e-28 | 110 |
MS.gene76984.t1 | MTR_8g031100 | 40.930 | 215 | 105 | 7 | 47 | 255 | 85 | 283 | 8.31e-28 | 110 |
MS.gene76984.t1 | MTR_4g098460 | 43.827 | 162 | 70 | 4 | 127 | 268 | 78 | 238 | 8.40e-28 | 109 |
MS.gene76984.t1 | MTR_4g055803 | 40.254 | 236 | 115 | 9 | 50 | 279 | 59 | 274 | 8.79e-26 | 107 |
MS.gene76984.t1 | MTR_8g098390 | 37.879 | 198 | 108 | 3 | 50 | 245 | 96 | 280 | 1.09e-25 | 105 |
MS.gene76984.t1 | MTR_4g055813 | 45.270 | 148 | 75 | 4 | 133 | 279 | 22 | 164 | 1.68e-24 | 100 |
MS.gene76984.t1 | MTR_1g079780 | 37.198 | 207 | 108 | 6 | 48 | 250 | 40 | 228 | 6.52e-24 | 100 |
MS.gene76984.t1 | MTR_4g055833 | 37.768 | 233 | 125 | 7 | 50 | 279 | 56 | 271 | 7.34e-24 | 100 |
MS.gene76984.t1 | MTR_7g116320 | 49.167 | 120 | 58 | 1 | 127 | 246 | 140 | 256 | 4.04e-23 | 98.6 |
MS.gene76984.t1 | MTR_3g100470 | 37.589 | 141 | 76 | 3 | 118 | 257 | 96 | 225 | 9.26e-23 | 96.3 |
MS.gene76984.t1 | MTR_4g055705 | 35.586 | 222 | 133 | 6 | 50 | 265 | 55 | 272 | 3.85e-22 | 94.7 |
MS.gene76984.t1 | MTR_5g011610 | 44.628 | 121 | 62 | 1 | 134 | 254 | 62 | 177 | 4.47e-22 | 95.1 |
MS.gene76984.t1 | MTR_5g011610 | 46.875 | 96 | 48 | 1 | 127 | 222 | 209 | 301 | 2.14e-17 | 82.0 |
MS.gene76984.t1 | MTR_7g116320 | 48.276 | 116 | 57 | 1 | 127 | 242 | 140 | 252 | 1.32e-20 | 90.1 |
MS.gene76984.t1 | MTR_1g038960 | 36.744 | 215 | 116 | 6 | 39 | 251 | 73 | 269 | 4.04e-20 | 89.7 |
MS.gene76984.t1 | MTR_3g068035 | 43.966 | 116 | 62 | 1 | 130 | 245 | 106 | 218 | 1.48e-17 | 82.0 |
MS.gene76984.t1 | MTR_5g066020 | 37.500 | 144 | 75 | 5 | 116 | 257 | 73 | 203 | 3.83e-17 | 80.1 |
MS.gene76984.t1 | MTR_5g013390 | 34.146 | 205 | 113 | 7 | 45 | 245 | 75 | 261 | 1.44e-16 | 79.7 |
MS.gene76984.t1 | MTR_5g014360 | 35.915 | 142 | 87 | 2 | 127 | 267 | 187 | 325 | 2.28e-16 | 79.3 |
MS.gene76984.t1 | MTR_3g023560 | 33.333 | 153 | 96 | 2 | 116 | 265 | 48 | 197 | 2.21e-15 | 75.1 |
MS.gene76984.t1 | MTR_1g038990 | 33.173 | 208 | 104 | 7 | 45 | 251 | 76 | 249 | 2.75e-15 | 75.9 |
MS.gene76984.t1 | MTR_1g044155 | 38.983 | 118 | 69 | 1 | 128 | 245 | 151 | 265 | 5.10e-14 | 72.4 |
MS.gene76984.t1 | MTR_4g098450 | 42.373 | 118 | 61 | 2 | 130 | 245 | 103 | 215 | 6.15e-14 | 71.6 |
MS.gene76984.t1 | MTR_7g080980 | 42.017 | 119 | 66 | 1 | 127 | 245 | 81 | 196 | 1.40e-13 | 70.1 |
MS.gene76984.t1 | MTR_5g080580 | 41.071 | 112 | 63 | 1 | 134 | 245 | 120 | 228 | 2.14e-13 | 70.1 |
MS.gene76984.t1 | MTR_3g116100 | 39.259 | 135 | 62 | 5 | 141 | 264 | 154 | 279 | 3.38e-13 | 69.7 |
MS.gene76984.t1 | MTR_1g073860 | 38.793 | 116 | 68 | 1 | 130 | 245 | 121 | 233 | 4.22e-13 | 69.3 |
MS.gene76984.t1 | MTR_5g011520 | 41.379 | 116 | 65 | 1 | 130 | 245 | 127 | 239 | 1.37e-12 | 67.8 |
MS.gene76984.t1 | MTR_5g011700 | 41.509 | 106 | 58 | 2 | 141 | 245 | 10 | 112 | 3.31e-12 | 64.7 |
MS.gene76984.t1 | MTR_5g041430 | 36.975 | 119 | 73 | 2 | 127 | 244 | 108 | 225 | 4.24e-12 | 66.2 |
MS.gene76984.t1 | MTR_5g091630 | 39.496 | 119 | 65 | 2 | 130 | 246 | 74 | 187 | 4.61e-12 | 65.5 |
MS.gene76984.t1 | MTR_8g036060 | 39.655 | 116 | 67 | 1 | 130 | 245 | 113 | 225 | 4.64e-12 | 66.2 |
MS.gene76984.t1 | MTR_1g079810 | 38.793 | 116 | 68 | 1 | 130 | 245 | 101 | 213 | 4.99e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76984.t1 | AT5G62260 | 55.000 | 220 | 84 | 6 | 50 | 257 | 75 | 291 | 4.09e-61 | 200 |
MS.gene76984.t1 | AT5G62260 | 55.000 | 220 | 84 | 6 | 50 | 257 | 75 | 291 | 4.09e-61 | 200 |
MS.gene76984.t1 | AT5G62260 | 55.556 | 207 | 81 | 5 | 50 | 248 | 75 | 278 | 2.18e-59 | 192 |
MS.gene76984.t1 | AT4G25320 | 48.400 | 250 | 118 | 5 | 38 | 281 | 73 | 317 | 3.78e-58 | 192 |
MS.gene76984.t1 | AT4G12080 | 49.789 | 237 | 94 | 9 | 44 | 264 | 83 | 310 | 2.93e-52 | 176 |
MS.gene76984.t1 | AT5G51590 | 52.511 | 219 | 83 | 3 | 49 | 246 | 76 | 294 | 2.04e-51 | 175 |
MS.gene76984.t1 | AT4G00200 | 47.773 | 247 | 80 | 7 | 38 | 264 | 43 | 260 | 1.61e-47 | 162 |
MS.gene76984.t1 | AT4G00200 | 47.773 | 247 | 80 | 7 | 38 | 264 | 43 | 260 | 1.61e-47 | 162 |
MS.gene76984.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.54e-42 | 150 |
MS.gene76984.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.54e-42 | 150 |
MS.gene76984.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.54e-42 | 150 |
MS.gene76984.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.54e-42 | 150 |
MS.gene76984.t1 | AT4G22770 | 44.635 | 233 | 116 | 5 | 50 | 274 | 71 | 298 | 2.81e-40 | 144 |
MS.gene76984.t1 | AT4G22770 | 44.635 | 233 | 116 | 5 | 50 | 274 | 71 | 298 | 2.81e-40 | 144 |
MS.gene76984.t1 | AT5G46640 | 42.593 | 216 | 113 | 4 | 48 | 258 | 99 | 308 | 2.10e-31 | 121 |
MS.gene76984.t1 | AT4G17950 | 40.724 | 221 | 114 | 4 | 49 | 254 | 129 | 347 | 1.57e-30 | 120 |
MS.gene76984.t1 | AT2G45850 | 46.212 | 132 | 68 | 1 | 127 | 255 | 159 | 290 | 1.14e-29 | 116 |
MS.gene76984.t1 | AT2G45850 | 46.212 | 132 | 68 | 1 | 127 | 255 | 159 | 290 | 1.14e-29 | 116 |
MS.gene76984.t1 | AT1G63470 | 40.404 | 198 | 106 | 6 | 50 | 245 | 104 | 291 | 1.54e-29 | 116 |
MS.gene76984.t1 | AT3G04590 | 45.968 | 124 | 64 | 1 | 127 | 250 | 168 | 288 | 9.62e-28 | 110 |
MS.gene76984.t1 | AT3G04590 | 47.899 | 119 | 59 | 1 | 127 | 245 | 168 | 283 | 1.94e-27 | 111 |
MS.gene76984.t1 | AT2G45850 | 47.059 | 119 | 63 | 0 | 127 | 245 | 159 | 277 | 3.63e-27 | 107 |
MS.gene76984.t1 | AT3G61310 | 33.865 | 251 | 131 | 5 | 45 | 277 | 95 | 328 | 4.73e-26 | 106 |
MS.gene76984.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 157 | 274 | 1.06e-24 | 102 |
MS.gene76984.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 157 | 274 | 1.06e-24 | 102 |
MS.gene76984.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.22e-24 | 102 |
MS.gene76984.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.22e-24 | 102 |
MS.gene76984.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.22e-24 | 102 |
MS.gene76984.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.22e-24 | 102 |
MS.gene76984.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.22e-24 | 102 |
MS.gene76984.t1 | AT5G49700 | 38.194 | 144 | 74 | 4 | 118 | 257 | 78 | 210 | 3.05e-20 | 89.0 |
MS.gene76984.t1 | AT2G36560 | 38.636 | 132 | 79 | 2 | 127 | 256 | 102 | 233 | 6.28e-19 | 87.8 |
MS.gene76984.t1 | AT4G14465 | 43.103 | 116 | 63 | 1 | 130 | 245 | 94 | 206 | 3.17e-16 | 77.8 |
MS.gene76984.t1 | AT1G14490 | 37.086 | 151 | 80 | 4 | 133 | 279 | 33 | 172 | 5.28e-16 | 75.9 |
MS.gene76984.t1 | AT1G14490 | 39.535 | 129 | 70 | 3 | 133 | 257 | 52 | 176 | 1.18e-15 | 75.5 |
MS.gene76984.t1 | AT2G35270 | 43.333 | 120 | 61 | 2 | 128 | 245 | 103 | 217 | 3.48e-15 | 75.1 |
MS.gene76984.t1 | AT3G60870 | 37.069 | 116 | 68 | 2 | 130 | 245 | 86 | 196 | 8.40e-14 | 70.9 |
MS.gene76984.t1 | AT3G55560 | 40.517 | 116 | 67 | 2 | 130 | 245 | 115 | 228 | 1.38e-13 | 70.9 |
MS.gene76984.t1 | AT4G17800 | 40.517 | 116 | 66 | 1 | 130 | 245 | 109 | 221 | 1.93e-13 | 70.1 |
MS.gene76984.t1 | AT1G76500 | 36.800 | 125 | 67 | 2 | 130 | 245 | 99 | 220 | 2.11e-13 | 70.1 |
MS.gene76984.t1 | AT5G28590 | 33.333 | 147 | 74 | 2 | 108 | 254 | 8 | 130 | 8.53e-13 | 67.0 |
MS.gene76984.t1 | AT2G42940 | 36.134 | 119 | 69 | 2 | 130 | 246 | 80 | 193 | 5.98e-12 | 65.1 |
Find 83 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCCAGATTCACTCTTTCT+AGG | 0.207106 | 6.1:+56829239 | None:intergenic |
GGGTGCACTGGCTGGTTTGC+TGG | 0.209879 | 6.1:-56825325 | MS.gene76984:CDS |
GGCCCCACCTGGCTTCAATT+TGG | 0.255143 | 6.1:-56829357 | MS.gene76984:CDS |
CCGGCTCCGGTGCCGGTTGC+CGG | 0.270975 | 6.1:-56829293 | MS.gene76984:CDS |
CTCTTTGGATTCTCCTTCTC+TGG | 0.284566 | 6.1:+56824598 | None:intergenic |
TGATCGACCCTCTGCCTCTT+TGG | 0.296914 | 6.1:+56824583 | None:intergenic |
AACGGAATGGAAGCCGAAAT+TGG | 0.321360 | 6.1:+56829194 | None:intergenic |
AAACCGGCCGGTGACATTAT+AGG | 0.338551 | 6.1:+56824472 | None:intergenic |
TGGGTCCACCGGAGAGTTAC+CGG | 0.346153 | 6.1:-56829312 | MS.gene76984:CDS |
CATGTGCTTACTGTAAATTC+TGG | 0.373117 | 6.1:-56827847 | MS.gene76984:CDS |
AGTGGTGGTGGTGGAGGTGG+AGG | 0.384533 | 6.1:-56829146 | MS.gene76984:CDS |
TTTGGCAATGGCCAAGGCTC+TGG | 0.387972 | 6.1:-56824436 | MS.gene76984:CDS |
GAAGAATTGAGAACTGATAT+TGG | 0.391643 | 6.1:-56824505 | MS.gene76984:CDS |
GGCTTCTTAATTGATTCAAA+TGG | 0.394342 | 6.1:+56829113 | None:intergenic |
AATATCAGTTCTCAATTCTT+CGG | 0.403456 | 6.1:+56824507 | None:intergenic |
AAAAGTGGTGGTGGTGGAGG+TGG | 0.408449 | 6.1:-56829149 | MS.gene76984:CDS |
GTTGTCACCGATGCCAATTT+CGG | 0.412586 | 6.1:-56829207 | MS.gene76984:CDS |
TGGCGGTACTTCAACGTATG+AGG | 0.428599 | 6.1:-56826277 | MS.gene76984:intron |
TGGAAAAGTGGTGGTGGTGG+AGG | 0.429615 | 6.1:-56829152 | MS.gene76984:CDS |
TCGGCTTCCATTCCGTTGAC+CGG | 0.436479 | 6.1:-56829188 | MS.gene76984:CDS |
AGGCCTAGAAAGAGTGAATC+TGG | 0.438792 | 6.1:-56829242 | MS.gene76984:CDS |
GGTTGGAAAAGTGGTGGTGG+TGG | 0.438943 | 6.1:-56829155 | MS.gene76984:CDS |
GCTGGTTTGCTGGTAGCTGC+TGG | 0.440446 | 6.1:-56825315 | MS.gene76984:CDS |
TCAGGTTGGAAAAGTGGTGG+TGG | 0.447028 | 6.1:-56829158 | MS.gene76984:CDS |
AGAGTTACCGGCTCCGGTGC+CGG | 0.450681 | 6.1:-56829300 | MS.gene76984:CDS |
GAGGCAGAGGGTCGATCATT+CGG | 0.452684 | 6.1:-56824578 | MS.gene76984:CDS |
TCAAAATCATTCAACTTCAA+AGG | 0.458053 | 6.1:+56829092 | None:intergenic |
TCATTTGTGCCAACTGAGAA+TGG | 0.458331 | 6.1:-56825414 | MS.gene76984:CDS |
ACCTCCACACCACCGGCAAC+CGG | 0.462994 | 6.1:+56829281 | None:intergenic |
GGATTGACAAAGAGCAGATC+TGG | 0.464623 | 6.1:-56825393 | MS.gene76984:CDS |
TTTGTCAATCCATTCTCAGT+TGG | 0.465539 | 6.1:+56825405 | None:intergenic |
CCGGCAACCGGCACCGGAGC+CGG | 0.468277 | 6.1:+56829293 | None:intergenic |
ACACCACCGGCAACCGGCAC+CGG | 0.469218 | 6.1:+56829287 | None:intergenic |
AATTGAAGCCAGGTGGGGCC+TGG | 0.481468 | 6.1:+56829360 | None:intergenic |
AAAAGAAGCAAAGTTAAAAC+CGG | 0.482386 | 6.1:+56824456 | None:intergenic |
GTCTCATTGGCAGGTCCAAA+TGG | 0.485852 | 6.1:-56825360 | MS.gene76984:CDS |
CACCGGAGAGTTACCGGCTC+CGG | 0.489902 | 6.1:-56829306 | MS.gene76984:CDS |
CACCGGAGCCGGTAACTCTC+CGG | 0.499860 | 6.1:+56829304 | None:intergenic |
AGGTGAAGAAGAAGAGGGGC+AGG | 0.505369 | 6.1:-56829262 | MS.gene76984:CDS |
AGGAGAATCCAAAGAGGCAG+AGG | 0.506599 | 6.1:-56824591 | MS.gene76984:CDS |
TGGTAGAATGAGTGTCTCAT+TGG | 0.507910 | 6.1:-56825373 | MS.gene76984:CDS |
GGTAGCTGCTGGTTCTGTGC+AGG | 0.510940 | 6.1:-56825304 | MS.gene76984:intron |
TTCGAGATTCTTTCCTTGAG+CGG | 0.516198 | 6.1:-56825438 | MS.gene76984:CDS |
AGAATGAGTGTCTCATTGGC+AGG | 0.525010 | 6.1:-56825369 | MS.gene76984:CDS |
AATGTTAACCAGGCCCCACC+TGG | 0.534870 | 6.1:-56829368 | MS.gene76984:CDS |
GTGTGGAGGTGAAGAAGAAG+AGG | 0.538667 | 6.1:-56829268 | MS.gene76984:CDS |
GATAATGGAATATCACCCTT+CGG | 0.542326 | 6.1:-56827886 | MS.gene76984:CDS |
GCCGGTTGCCGGTGGTGTGG+AGG | 0.553597 | 6.1:-56829282 | MS.gene76984:CDS |
AGCATCTTAATGGCTAGGGT+TGG | 0.554473 | 6.1:+56824380 | None:intergenic |
ATATCTATTCTGTCTGCGAC+TGG | 0.555702 | 6.1:-56826339 | MS.gene76984:CDS |
TAATATGAGATGATGTAGGA+GGG | 0.557130 | 6.1:+56824545 | None:intergenic |
TGTGGAGGTGAAGAAGAAGA+GGG | 0.558126 | 6.1:-56829267 | MS.gene76984:CDS |
AAAATCTCCGGTCAACGGAA+TGG | 0.558235 | 6.1:+56829181 | None:intergenic |
TACCGCCACAAGCATCCGAC+TGG | 0.566838 | 6.1:+56826292 | None:intergenic |
GAATGTAACACTTCGCCAGT+CGG | 0.569594 | 6.1:-56826307 | MS.gene76984:CDS |
TTAATATGAGATGATGTAGG+AGG | 0.569764 | 6.1:+56824544 | None:intergenic |
TGGCACAAATGAGCCGCTCA+AGG | 0.571234 | 6.1:+56825425 | None:intergenic |
AGCCAAATTGAAGCCAGGTG+GGG | 0.575359 | 6.1:+56829355 | None:intergenic |
GGTGCCGGTTGCCGGTGGTG+TGG | 0.577992 | 6.1:-56829285 | MS.gene76984:CDS |
GAGCCAAATTGAAGCCAGGT+GGG | 0.578975 | 6.1:+56829354 | None:intergenic |
CTTCGCCAGTCGGATGCTTG+TGG | 0.579914 | 6.1:-56826297 | MS.gene76984:CDS |
ATGATGAGTTGCCAGAGCCT+TGG | 0.580544 | 6.1:+56824425 | None:intergenic |
CTTCTTCACCTCCACACCAC+CGG | 0.581394 | 6.1:+56829274 | None:intergenic |
TTATTAATATGAGATGATGT+AGG | 0.582862 | 6.1:+56824541 | None:intergenic |
GTGGAGGTGAAGAAGAAGAG+GGG | 0.585769 | 6.1:-56829266 | MS.gene76984:CDS |
GCTCCGGTGCCGGTTGCCGG+TGG | 0.592166 | 6.1:-56829290 | MS.gene76984:CDS |
GAGTGAATCTGGAAGTAAGC+CGG | 0.592179 | 6.1:-56829231 | MS.gene76984:CDS |
GCATGCTGTTAATGTTAACC+AGG | 0.592649 | 6.1:-56829378 | MS.gene76984:CDS |
ATTGGCATCGGTGACAACGC+CGG | 0.600825 | 6.1:+56829212 | None:intergenic |
AATGAAGCCTATAATGTCAC+CGG | 0.604485 | 6.1:-56824479 | MS.gene76984:CDS |
AATATGAGATGATGTAGGAG+GGG | 0.606351 | 6.1:+56824546 | None:intergenic |
GAAGCAAAGTTAAAACCGGC+CGG | 0.607612 | 6.1:+56824460 | None:intergenic |
CGCCAGTCGGATGCTTGTGG+CGG | 0.616878 | 6.1:-56826294 | MS.gene76984:CDS |
CGGAGCCGGTAACTCTCCGG+TGG | 0.618825 | 6.1:+56829307 | None:intergenic |
TGAGCCAAATTGAAGCCAGG+TGG | 0.640774 | 6.1:+56829353 | None:intergenic |
ATGGAAGCCGAAATTGGCAT+CGG | 0.640906 | 6.1:+56829200 | None:intergenic |
GGAGAATCCAAAGAGGCAGA+GGG | 0.642206 | 6.1:-56824590 | MS.gene76984:CDS |
AAGCCTATAATGTCACCGGC+CGG | 0.645286 | 6.1:-56824475 | MS.gene76984:CDS |
TGGCAACTCATCATCATCTG+CGG | 0.650322 | 6.1:-56824416 | MS.gene76984:CDS |
GAATTGAGAACTGATATTGG+TGG | 0.652922 | 6.1:-56824502 | MS.gene76984:CDS |
GATGATGTAGGAGGGGCAGT+TGG | 0.671450 | 6.1:+56824553 | None:intergenic |
GCTTACTGTAAATTCTGGAG+AGG | 0.684124 | 6.1:-56827842 | MS.gene76984:intron |
CAGAGAAGGAGAATCCAAAG+AGG | 0.694397 | 6.1:-56824597 | MS.gene76984:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACAATTAACAAATATATT+TGG | + | chr6.1:56827366-56827385 | None:intergenic | 10.0% |
!! | TAAAAAATTGTAAAAGAAAA+TGG | - | chr6.1:56829072-56829091 | MS.gene76984:CDS | 10.0% |
!! | TACAATTAACAAATATATTT+GGG | + | chr6.1:56827365-56827384 | None:intergenic | 10.0% |
!!! | ATATCATATATTTTAAAAAG+GGG | + | chr6.1:56826174-56826193 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAAAAACGCA+TGG | + | chr6.1:56827725-56827744 | None:intergenic | 15.0% |
!! | CATAAAAATTATTGAAACTA+GGG | + | chr6.1:56827833-56827852 | None:intergenic | 15.0% |
!! | GTAAATGATATTATTTGATT+CGG | - | chr6.1:56825088-56825107 | MS.gene76984:intron | 15.0% |
!! | TATTAAATTATTACATGTGT+CGG | + | chr6.1:56827906-56827925 | None:intergenic | 15.0% |
!! | TCATAAAAATTATTGAAACT+AGG | + | chr6.1:56827834-56827853 | None:intergenic | 15.0% |
!! | TTAAATGAAAGAAAAACTAA+GGG | - | chr6.1:56828856-56828875 | MS.gene76984:intron | 15.0% |
!! | TTTAGTATCTGATAAAATAT+TGG | - | chr6.1:56828534-56828553 | MS.gene76984:intron | 15.0% |
!! | TTTATATTAGATTGTAAATC+CGG | + | chr6.1:56826151-56826170 | None:intergenic | 15.0% |
!!! | TCATTTTTTCAAATTTTTAC+CGG | - | chr6.1:56825353-56825372 | MS.gene76984:CDS | 15.0% |
!!! | TTCATTTTAAATTGCTAAAA+AGG | - | chr6.1:56828930-56828949 | MS.gene76984:intron | 15.0% |
!!! | TTTAAAACTTCACATTAATT+CGG | - | chr6.1:56827595-56827614 | MS.gene76984:intron | 15.0% |
!! | AACAAATATATTTGGGTATT+GGG | + | chr6.1:56827358-56827377 | None:intergenic | 20.0% |
!! | AACTCAAGGTTAAAAAAAAA+AGG | + | chr6.1:56826622-56826641 | None:intergenic | 20.0% |
!! | AATCACATAATTATATGTGT+CGG | - | chr6.1:56825197-56825216 | MS.gene76984:intron | 20.0% |
!! | ATCCATATCATGTTTATAAT+CGG | + | chr6.1:56826808-56826827 | None:intergenic | 20.0% |
!! | ATGAAACCATCAAATAAAAA+GGG | - | chr6.1:56828306-56828325 | MS.gene76984:intron | 20.0% |
!! | CCTTAAAATAATAAAGAAAC+CGG | - | chr6.1:56827196-56827215 | MS.gene76984:intron | 20.0% |
!! | CTTAAATGAAAGAAAAACTA+AGG | - | chr6.1:56828855-56828874 | MS.gene76984:intron | 20.0% |
!! | GAAAATGGTTAGAAAAATAT+TGG | - | chr6.1:56829087-56829106 | MS.gene76984:CDS | 20.0% |
!! | TAACAAATATATTTGGGTAT+TGG | + | chr6.1:56827359-56827378 | None:intergenic | 20.0% |
!! | TGGTAATAAAAAAAGTGAAA+TGG | + | chr6.1:56827263-56827282 | None:intergenic | 20.0% |
!! | TTATATTAGATTGTAAATCC+GGG | + | chr6.1:56826150-56826169 | None:intergenic | 20.0% |
!! | TTATGACATATTGCTAAATA+AGG | - | chr6.1:56825451-56825470 | MS.gene76984:intron | 20.0% |
!! | TTATTAATATGAGATGATGT+AGG | + | chr6.1:56829262-56829281 | None:intergenic | 20.0% |
!! | TTTATTACCACAAAAATTGT+CGG | + | chr6.1:56826234-56826253 | None:intergenic | 20.0% |
!!! | AAATACTAGGTTTTTCAATT+TGG | + | chr6.1:56826879-56826898 | None:intergenic | 20.0% |
!!! | AATGACAGTTTTAATTTATC+TGG | - | chr6.1:56825626-56825645 | MS.gene76984:intron | 20.0% |
!!! | ACTTAATTGGTTTTTCAATT+TGG | - | chr6.1:56826670-56826689 | MS.gene76984:intron | 20.0% |
!!! | GTTTTCATTGTTTACAAAAA+AGG | + | chr6.1:56829007-56829026 | None:intergenic | 20.0% |
!!! | TCTAACTATTTTCAGAATAT+AGG | + | chr6.1:56826006-56826025 | None:intergenic | 20.0% |
!!! | TGATTTTCTCAAATTATTAG+CGG | + | chr6.1:56825182-56825201 | None:intergenic | 20.0% |
!!! | TTATGTGTTATGTTTTGTTT+TGG | - | chr6.1:56824879-56824898 | MS.gene76984:intron | 20.0% |
!!! | TTTGTTCATATTGACTTAAT+TGG | - | chr6.1:56826657-56826676 | MS.gene76984:intron | 20.0% |
! | AAAAGAAGCAAAGTTAAAAC+CGG | + | chr6.1:56829347-56829366 | None:intergenic | 25.0% |
! | AAACATTTGAAGAGAAATAG+CGG | - | chr6.1:56827094-56827113 | MS.gene76984:intron | 25.0% |
! | AACCGATTATAAACATGATA+TGG | - | chr6.1:56826803-56826822 | MS.gene76984:intron | 25.0% |
! | AATATCAGTTCTCAATTCTT+CGG | + | chr6.1:56829296-56829315 | None:intergenic | 25.0% |
! | AATTGAACATAAACAGGATA+TGG | + | chr6.1:56826746-56826765 | None:intergenic | 25.0% |
! | ACCGATAATATTAAAACGAT+TGG | + | chr6.1:56826461-56826480 | None:intergenic | 25.0% |
! | ACGAAAGGAGAAAAAAAAAA+CGG | + | chr6.1:56827297-56827316 | None:intergenic | 25.0% |
! | ACTAAAAAAATCAGACAACT+AGG | + | chr6.1:56825558-56825577 | None:intergenic | 25.0% |
! | AGATCTTAAATTGAAGATGT+GGG | - | chr6.1:56824963-56824982 | MS.gene76984:intron | 25.0% |
! | ATATAATCTGTGATGTGAAA+AGG | - | chr6.1:56825484-56825503 | MS.gene76984:intron | 25.0% |
! | ATCTATTTCGCTGATATAAT+TGG | - | chr6.1:56825753-56825772 | MS.gene76984:intron | 25.0% |
! | ATGACTATGATTTATGCATT+TGG | - | chr6.1:56825813-56825832 | MS.gene76984:intron | 25.0% |
! | ATGGAATTATGTCAAAACAA+TGG | + | chr6.1:56827790-56827809 | None:intergenic | 25.0% |
! | ATTTATCGCATTGAAATACT+AGG | + | chr6.1:56826892-56826911 | None:intergenic | 25.0% |
! | CATATTCAAAAGAAGCTTAA+TGG | - | chr6.1:56826053-56826072 | MS.gene76984:intron | 25.0% |
! | CTCATAAATTGAACATAAAC+AGG | + | chr6.1:56826752-56826771 | None:intergenic | 25.0% |
! | GATGAAACCATCAAATAAAA+AGG | - | chr6.1:56828305-56828324 | MS.gene76984:intron | 25.0% |
! | TAAAAGATAGAATCAACTCA+AGG | + | chr6.1:56826636-56826655 | None:intergenic | 25.0% |
! | TAAAATAATAAAGAAACCGG+CGG | - | chr6.1:56827199-56827218 | MS.gene76984:intron | 25.0% |
! | TAAATGTGAGTGATTAGATT+AGG | + | chr6.1:56826309-56826328 | None:intergenic | 25.0% |
! | TATATCTTCTGTTAGTAGTA+AGG | + | chr6.1:56827011-56827030 | None:intergenic | 25.0% |
! | TATATTAGATTGTAAATCCG+GGG | + | chr6.1:56826149-56826168 | None:intergenic | 25.0% |
! | TCAAAATCATTCAACTTCAA+AGG | + | chr6.1:56824711-56824730 | None:intergenic | 25.0% |
! | TGAAACCATCAAATAAAAAG+GGG | - | chr6.1:56828307-56828326 | MS.gene76984:intron | 25.0% |
! | TTGATATCTAATGCATACAA+TGG | + | chr6.1:56827678-56827697 | None:intergenic | 25.0% |
! | TTTCAGAATATAGGCTTAAA+AGG | + | chr6.1:56825997-56826016 | None:intergenic | 25.0% |
!! | AAAATACGTTGAATTTTGCT+GGG | - | chr6.1:56824469-56824488 | MS.gene76984:CDS | 25.0% |
!! | ACGAAAATTGATGATAAACA+CGG | + | chr6.1:56826548-56826567 | None:intergenic | 25.0% |
!! | AGTTTTACTGTTACATTTGT+TGG | - | chr6.1:56824813-56824832 | MS.gene76984:intron | 25.0% |
!! | CATTAAGCTTCTTTTGAATA+TGG | + | chr6.1:56826055-56826074 | None:intergenic | 25.0% |
!! | CTTCAATTTAAGATCTGAAA+GGG | + | chr6.1:56824959-56824978 | None:intergenic | 25.0% |
!! | TAATTAACCTTTGTTGTAGA+AGG | - | chr6.1:56828750-56828769 | MS.gene76984:intron | 25.0% |
!! | TCTTCAATTTAAGATCTGAA+AGG | + | chr6.1:56824960-56824979 | None:intergenic | 25.0% |
!! | TGGTAATAAAAAAAGTGCAA+TGG | - | chr6.1:56826244-56826263 | MS.gene76984:intron | 25.0% |
!! | TTCAAGATTTCTGAAAATGT+TGG | - | chr6.1:56829041-56829060 | MS.gene76984:intron | 25.0% |
!!! | AAGTTGAATGATTTTGATGA+AGG | - | chr6.1:56824714-56824733 | MS.gene76984:intron | 25.0% |
!!! | AGATATTTTTGTGCTTTTAC+AGG | - | chr6.1:56828334-56828353 | MS.gene76984:intron | 25.0% |
!!! | ATTATTTTTTTCCTCTACGA+GGG | - | chr6.1:56825066-56825085 | MS.gene76984:intron | 25.0% |
!!! | CCGGTTTCTTTATTATTTTA+AGG | + | chr6.1:56827199-56827218 | None:intergenic | 25.0% |
!!! | GATATTTTTGTGCTTTTACA+GGG | - | chr6.1:56828335-56828354 | MS.gene76984:intron | 25.0% |
!!! | GCCAATCGTTTTAATATTAT+CGG | - | chr6.1:56826457-56826476 | MS.gene76984:intron | 25.0% |
!!! | TATTATTTTTTTCCTCTACG+AGG | - | chr6.1:56825065-56825084 | MS.gene76984:intron | 25.0% |
!!! | TCTTCAAATGTTTTATTTCG+AGG | + | chr6.1:56827087-56827106 | None:intergenic | 25.0% |
!!! | TTTGGATTTGATTTGATTCA+TGG | - | chr6.1:56824897-56824916 | MS.gene76984:intron | 25.0% |
AAAATAGCAGTGAATCAACT+CGG | + | chr6.1:56828167-56828186 | None:intergenic | 30.0% | |
AAACTAACTAACCAGATCAA+AGG | + | chr6.1:56824793-56824812 | None:intergenic | 30.0% | |
AATTCTTTCAATGAAAGGGA+TGG | + | chr6.1:56827809-56827828 | None:intergenic | 30.0% | |
ACAATTCTGATAGAGAACAT+AGG | - | chr6.1:56828975-56828994 | MS.gene76984:intron | 30.0% | |
ACGAAAACTGATGATAAACA+CGG | - | chr6.1:56827047-56827066 | MS.gene76984:intron | 30.0% | |
AGGAGAAAAAAAAAACGGAT+CGG | + | chr6.1:56827292-56827311 | None:intergenic | 30.0% | |
AGGGAAATTCTTTCAATGAA+AGG | + | chr6.1:56827814-56827833 | None:intergenic | 30.0% | |
AGTGAAATGGCAATTAACAA+AGG | + | chr6.1:56827250-56827269 | None:intergenic | 30.0% | |
ATATGATGATTTAGTGAAGC+AGG | - | chr6.1:56825726-56825745 | MS.gene76984:intron | 30.0% | |
ATATGCATAAAGACAAAACC+AGG | + | chr6.1:56825710-56825729 | None:intergenic | 30.0% | |
ATATTAGATTGTAAATCCGG+GGG | + | chr6.1:56826148-56826167 | None:intergenic | 30.0% | |
ATGATTGTCCCTTGTAAATA+TGG | - | chr6.1:56827850-56827869 | MS.gene76984:CDS | 30.0% | |
ATTAGATTAGGTCAACATCT+AGG | + | chr6.1:56826297-56826316 | None:intergenic | 30.0% | |
ATTTGTAGTAAGCAATAGCA+TGG | - | chr6.1:56826594-56826613 | MS.gene76984:intron | 30.0% | |
CAGATCTTAAATTGAAGATG+TGG | - | chr6.1:56824962-56824981 | MS.gene76984:intron | 30.0% | |
CATAAGATTGTGACAACAAT+TGG | - | chr6.1:56827119-56827138 | MS.gene76984:intron | 30.0% | |
CATACAATGGCAGAAATAAA+AGG | + | chr6.1:56827665-56827684 | None:intergenic | 30.0% | |
CCAAAAATAGTGTCAAATAG+CGG | - | chr6.1:56828236-56828255 | MS.gene76984:intron | 30.0% | |
CCACTTAGCACATAAATAAT+AGG | + | chr6.1:56827756-56827775 | None:intergenic | 30.0% | |
CCATTATCTACAAAATAGAC+AGG | + | chr6.1:56825902-56825921 | None:intergenic | 30.0% | |
CCTATTATTTATGTGCTAAG+TGG | - | chr6.1:56827753-56827772 | MS.gene76984:intron | 30.0% | |
CTCTACAAACATTTATTGTG+AGG | + | chr6.1:56826837-56826856 | None:intergenic | 30.0% | |
GAAGAATTGAGAACTGATAT+TGG | - | chr6.1:56829295-56829314 | MS.gene76984:CDS | 30.0% | |
GATCTTAAATTGAAGATGTG+GGG | - | chr6.1:56824964-56824983 | MS.gene76984:intron | 30.0% | |
GGGAAATTCTTTCAATGAAA+GGG | + | chr6.1:56827813-56827832 | None:intergenic | 30.0% | |
GTGAAATGGCAATTAACAAA+GGG | + | chr6.1:56827249-56827268 | None:intergenic | 30.0% | |
TAATATGAGATGATGTAGGA+GGG | + | chr6.1:56829258-56829277 | None:intergenic | 30.0% | |
TATATCCCTGCTAAAGAAAT+AGG | + | chr6.1:56827559-56827578 | None:intergenic | 30.0% | |
TATGATGATTTAGTGAAGCA+GGG | - | chr6.1:56825727-56825746 | MS.gene76984:intron | 30.0% | |
TCTCAGAATTCAGTATTTGT+CGG | + | chr6.1:56826780-56826799 | None:intergenic | 30.0% | |
TGAATGTGTTTGTACTTCAT+AGG | + | chr6.1:56827883-56827902 | None:intergenic | 30.0% | |
TGGCATTCAAATAAGTTTGT+AGG | + | chr6.1:56826035-56826054 | None:intergenic | 30.0% | |
TGTTGTTAGCATTTCTTACT+AGG | + | chr6.1:56828190-56828209 | None:intergenic | 30.0% | |
TTAATATGAGATGATGTAGG+AGG | + | chr6.1:56829259-56829278 | None:intergenic | 30.0% | |
TTAGTAGTAAGGAATAGCAA+TGG | + | chr6.1:56827000-56827019 | None:intergenic | 30.0% | |
TTATCGGTAAACTTTCGTTA+AGG | - | chr6.1:56826473-56826492 | MS.gene76984:intron | 30.0% | |
TTCATCTAGTGCTGTAATTA+GGG | + | chr6.1:56828291-56828310 | None:intergenic | 30.0% | |
TTCTTCATTGCAGAATGTAA+TGG | - | chr6.1:56825595-56825614 | MS.gene76984:intron | 30.0% | |
TTGAACGTAATTACATGTGT+CGG | - | chr6.1:56828645-56828664 | MS.gene76984:intron | 30.0% | |
TTTCATCTAGTGCTGTAATT+AGG | + | chr6.1:56828292-56828311 | None:intergenic | 30.0% | |
TTTGATTCATGGTTTAGAAG+TGG | - | chr6.1:56824908-56824927 | MS.gene76984:intron | 30.0% | |
! | AAAAAACGGATCGGTAATTT+TGG | + | chr6.1:56827283-56827302 | None:intergenic | 30.0% |
! | ATGGAAGAAAGAGAGATTTT+TGG | - | chr6.1:56824393-56824412 | MS.gene76984:CDS | 30.0% |
! | ATTATACAACCATTTTCCCT+TGG | + | chr6.1:56828066-56828085 | None:intergenic | 30.0% |
! | ATTGATGATAAACACGGATA+TGG | + | chr6.1:56826542-56826561 | None:intergenic | 30.0% |
! | CAAAATACGTTGAATTTTGC+TGG | - | chr6.1:56824468-56824487 | MS.gene76984:CDS | 30.0% |
! | CCTGTCTATTTTGTAGATAA+TGG | - | chr6.1:56825899-56825918 | MS.gene76984:intron | 30.0% |
! | GCTTAATGGTTAATCAGTTT+TGG | - | chr6.1:56826067-56826086 | MS.gene76984:intron | 30.0% |
! | GGCTTCTTAATTGATTCAAA+TGG | + | chr6.1:56824690-56824709 | None:intergenic | 30.0% |
! | GTTATTTCCTTCTACAACAA+AGG | + | chr6.1:56828760-56828779 | None:intergenic | 30.0% |
! | TACATTTTGTTAAATGCCAG+TGG | - | chr6.1:56826108-56826127 | MS.gene76984:intron | 30.0% |
! | TCATTCCTATTTCTTTAGCA+GGG | - | chr6.1:56827551-56827570 | MS.gene76984:intron | 30.0% |
! | TTCATTCCTATTTCTTTAGC+AGG | - | chr6.1:56827550-56827569 | MS.gene76984:intron | 30.0% |
!! | AAGAAAGTACTACAAACGAA+AGG | + | chr6.1:56827312-56827331 | None:intergenic | 30.0% |
!! | GATGAAGGTAATTTTGATGA+AGG | - | chr6.1:56824729-56824748 | MS.gene76984:intron | 30.0% |
!! | TGAAGGTACATGACAATTTT+AGG | - | chr6.1:56824746-56824765 | MS.gene76984:intron | 30.0% |
!!! | AAAGAGAGATTTTTGGTTCT+GGG | - | chr6.1:56824400-56824419 | MS.gene76984:CDS | 30.0% |
!!! | AAGGGATTAGTTTTTATCAG+GGG | - | chr6.1:56825299-56825318 | MS.gene76984:intron | 30.0% |
!!! | GAAGGGATTAGTTTTTATCA+GGG | - | chr6.1:56825298-56825317 | MS.gene76984:intron | 30.0% |
!!! | GGTTTTAACTTTGCTTCTTT+TGG | - | chr6.1:56829346-56829365 | MS.gene76984:CDS | 30.0% |
!!! | TCTTGTTTTTTTATCTTCGC+AGG | + | chr6.1:56826951-56826970 | None:intergenic | 30.0% |
!!! | TGAAGGGATTAGTTTTTATC+AGG | - | chr6.1:56825297-56825316 | MS.gene76984:intron | 30.0% |
!!! | TTGTATTGTTGATTTTCCTC+TGG | - | chr6.1:56827380-56827399 | MS.gene76984:intron | 30.0% |
AACTGATGATAAACACGGAT+AGG | - | chr6.1:56827052-56827071 | MS.gene76984:intron | 35.0% | |
AATATCATTTACCCTCGTAG+AGG | + | chr6.1:56825080-56825099 | None:intergenic | 35.0% | |
AATATGAGATGATGTAGGAG+GGG | + | chr6.1:56829257-56829276 | None:intergenic | 35.0% | |
AATGAAGCCTATAATGTCAC+CGG | - | chr6.1:56829321-56829340 | MS.gene76984:CDS | 35.0% | |
ACATCTTCGATCTTAAGTGT+CGG | - | chr6.1:56828004-56828023 | MS.gene76984:intron | 35.0% | |
ACTGATGATAAACACGGATA+GGG | - | chr6.1:56827053-56827072 | MS.gene76984:intron | 35.0% | |
ATCTCAAGCTTCATATCCAA+TGG | + | chr6.1:56827147-56827166 | None:intergenic | 35.0% | |
ATGAAGCTTGAGATTGGAAT+TGG | - | chr6.1:56827153-56827172 | MS.gene76984:intron | 35.0% | |
ATTTAACACCAATGCATGTG+TGG | - | chr6.1:56827628-56827647 | MS.gene76984:intron | 35.0% | |
CATGTGCTTACTGTAAATTC+TGG | - | chr6.1:56825953-56825972 | MS.gene76984:intron | 35.0% | |
GAATTGAGAACTGATATTGG+TGG | - | chr6.1:56829298-56829317 | MS.gene76984:CDS | 35.0% | |
GCTACATTGTATTGTACTTG+TGG | - | chr6.1:56828028-56828047 | MS.gene76984:intron | 35.0% | |
GTCAGAAGCCATATTTACAA+GGG | + | chr6.1:56827861-56827880 | None:intergenic | 35.0% | |
GTTGTAGAAGGAAATAACAC+TGG | - | chr6.1:56828762-56828781 | MS.gene76984:intron | 35.0% | |
TCATCTAGTGCTGTAATTAG+GGG | + | chr6.1:56828290-56828309 | None:intergenic | 35.0% | |
TCTCAAATTATTAGCGGTGA+CGG | + | chr6.1:56825176-56825195 | None:intergenic | 35.0% | |
TGAAAGGGAATCTAAGCTAA+GGG | + | chr6.1:56824944-56824963 | None:intergenic | 35.0% | |
TGATGCGTAAAACAATGAGA+GGG | + | chr6.1:56829160-56829179 | None:intergenic | 35.0% | |
TGTCATGTCTAGTGTTTCAT+AGG | - | chr6.1:56825390-56825409 | MS.gene76984:CDS | 35.0% | |
TTGGATATGAAGCTTGAGAT+TGG | - | chr6.1:56827147-56827166 | MS.gene76984:intron | 35.0% | |
TTTCCAACCTGAAAAATCTC+CGG | + | chr6.1:56824634-56824653 | None:intergenic | 35.0% | |
TTTGTCAATCCATTCTCAGT+TGG | + | chr6.1:56828398-56828417 | None:intergenic | 35.0% | |
! | AACTTTGCTTCTTTTGGCAA+TGG | - | chr6.1:56829352-56829371 | MS.gene76984:CDS | 35.0% |
! | ATGAAGACGTTTCAAGTCAT+CGG | - | chr6.1:56825661-56825680 | MS.gene76984:intron | 35.0% |
! | CCGCTATTTGACACTATTTT+TGG | + | chr6.1:56828239-56828258 | None:intergenic | 35.0% |
! | TTTGCTGTCATAGTAATGTG+AGG | - | chr6.1:56825003-56825022 | MS.gene76984:intron | 35.0% |
! | TTTTGTTAAATGCCAGTGGT+CGG | - | chr6.1:56826112-56826131 | MS.gene76984:intron | 35.0% |
!! | GATAATGGAATATCACCCTT+CGG | - | chr6.1:56825914-56825933 | MS.gene76984:intron | 35.0% |
!! | TAGAGAAATAGCATTGACAC+AGG | - | chr6.1:56826852-56826871 | MS.gene76984:intron | 35.0% |
!! | TGTCACCCCTTTTTATTTGA+TGG | + | chr6.1:56828315-56828334 | None:intergenic | 35.0% |
!!! | AAGCACATGCGTTTTGAAAT+TGG | + | chr6.1:56825942-56825961 | None:intergenic | 35.0% |
!!! | GAAAGAGAGATTTTTGGTTC+TGG | - | chr6.1:56824399-56824418 | MS.gene76984:CDS | 35.0% |
!!! | GATTTTTCAGGTTGGAAAAG+TGG | - | chr6.1:56824636-56824655 | MS.gene76984:intron | 35.0% |
!!! | GCTATTTTTAGCCTTTGATC+TGG | - | chr6.1:56824779-56824798 | MS.gene76984:intron | 35.0% |
!!! | GTTTTGAAATTGGAACCGAA+GGG | + | chr6.1:56825932-56825951 | None:intergenic | 35.0% |
AAATTGAAGATGTGGGGTGT+TGG | - | chr6.1:56824970-56824989 | MS.gene76984:intron | 40.0% | |
AGTCCAAATCAATATCCTGC+AGG | + | chr6.1:56825426-56825445 | None:intergenic | 40.0% | |
ATAGGCAATAATTGTCCTGC+AGG | - | chr6.1:56825408-56825427 | MS.gene76984:CDS | 40.0% | |
ATATCTATTCTGTCTGCGAC+TGG | - | chr6.1:56827461-56827480 | MS.gene76984:intron | 40.0% | |
ATGGCAATTAACAGAGAGTG+TGG | - | chr6.1:56826263-56826282 | MS.gene76984:intron | 40.0% | |
ATTAGGTCAACATCTAGGTC+TGG | + | chr6.1:56826292-56826311 | None:intergenic | 40.0% | |
CAGAATTCAGTATTTGTCGG+CGG | + | chr6.1:56826777-56826796 | None:intergenic | 40.0% | |
CATCTAGTGCTGTAATTAGG+GGG | + | chr6.1:56828289-56828308 | None:intergenic | 40.0% | |
CATCTTCGATCTTAAGTGTC+GGG | - | chr6.1:56828005-56828024 | MS.gene76984:intron | 40.0% | |
CGGAAATCGAGCTAATTGAA+GGG | - | chr6.1:56825108-56825127 | MS.gene76984:intron | 40.0% | |
CGTATAAACCACACATGCAT+TGG | + | chr6.1:56827639-56827658 | None:intergenic | 40.0% | |
CTGAAAGGGAATCTAAGCTA+AGG | + | chr6.1:56824945-56824964 | None:intergenic | 40.0% | |
CTGAAGCATGAGATTGGAAT+TGG | + | chr6.1:56826427-56826446 | None:intergenic | 40.0% | |
CTGATGCGTAAAACAATGAG+AGG | + | chr6.1:56829161-56829180 | None:intergenic | 40.0% | |
CTGTCATAGTAATGTGAGGT+CGG | - | chr6.1:56825007-56825026 | MS.gene76984:intron | 40.0% | |
CTGTGATGTGAAAAGGATGA+TGG | - | chr6.1:56825491-56825510 | MS.gene76984:intron | 40.0% | |
CTTCCAGATTCACTCTTTCT+AGG | + | chr6.1:56824564-56824583 | None:intergenic | 40.0% | |
GCAACAATTCCAAGGGAAAA+TGG | - | chr6.1:56828054-56828073 | MS.gene76984:intron | 40.0% | |
GCATGCTGTTAATGTTAACC+AGG | - | chr6.1:56824422-56824441 | MS.gene76984:CDS | 40.0% | |
GCTGTAATTAGGGGGAAAAA+TGG | + | chr6.1:56828281-56828300 | None:intergenic | 40.0% | |
GGTCAGAAGCCATATTTACA+AGG | + | chr6.1:56827862-56827881 | None:intergenic | 40.0% | |
GTCTAACATTGGTATGACAC+CGG | + | chr6.1:56827960-56827979 | None:intergenic | 40.0% | |
GTCTGTGCTTCATAGTTGAA+GGG | - | chr6.1:56825281-56825300 | MS.gene76984:intron | 40.0% | |
GTGAAGTTAGAGCGAGTTAA+CGG | + | chr6.1:56828143-56828162 | None:intergenic | 40.0% | |
TAGTAAGGAATAGCAATGGC+AGG | + | chr6.1:56826996-56827015 | None:intergenic | 40.0% | |
TATGTGCTGCCAGAAAAAAG+TGG | - | chr6.1:56826207-56826226 | MS.gene76984:intron | 40.0% | |
TCGGAAATCGAGCTAATTGA+AGG | - | chr6.1:56825107-56825126 | MS.gene76984:intron | 40.0% | |
TGGTAGAATGAGTGTCTCAT+TGG | - | chr6.1:56828427-56828446 | MS.gene76984:intron | 40.0% | |
TGGTTTAGAAGTGGTATGTG+TGG | - | chr6.1:56824917-56824936 | MS.gene76984:intron | 40.0% | |
TGTCTGTGCTTCATAGTTGA+AGG | - | chr6.1:56825280-56825299 | MS.gene76984:intron | 40.0% | |
TTCGAGATTCTTTCCTTGAG+CGG | - | chr6.1:56828362-56828381 | MS.gene76984:intron | 40.0% | |
TTGAATGTAACCACATGTGC+CGG | - | chr6.1:56827938-56827957 | MS.gene76984:intron | 40.0% | |
! | AAGTGGTCCGACAATTTTTG+TGG | - | chr6.1:56826224-56826243 | MS.gene76984:intron | 40.0% |
! | ATCTTCGATCTTAAGTGTCG+GGG | - | chr6.1:56828006-56828025 | MS.gene76984:intron | 40.0% |
! | ATTTTCCTCTGGCATGTTCT+AGG | - | chr6.1:56827391-56827410 | MS.gene76984:intron | 40.0% |
! | GCAATTAACAAAGGGCATAG+CGG | + | chr6.1:56827241-56827260 | None:intergenic | 40.0% |
! | GCTTACTGTAAATTCTGGAG+AGG | - | chr6.1:56825958-56825977 | MS.gene76984:intron | 40.0% |
! | GTCCAAATGGTCGTGTTTTT+GGG | - | chr6.1:56828453-56828472 | MS.gene76984:intron | 40.0% |
! | TCGTATCTGAAGCATGAGAT+TGG | + | chr6.1:56826433-56826452 | None:intergenic | 40.0% |
! | TGTCCTGCAGGATATTGATT+TGG | - | chr6.1:56825420-56825439 | MS.gene76984:CDS | 40.0% |
! | TTTTCACAAGCTATGCAGCA+AGG | + | chr6.1:56828711-56828730 | None:intergenic | 40.0% |
! | TTTTGAGCCAAATTGAAGCC+AGG | + | chr6.1:56824453-56824472 | None:intergenic | 40.0% |
!! | CTCTCATTGTTTTACGCATC+AGG | - | chr6.1:56829159-56829178 | MS.gene76984:CDS | 40.0% |
!! | GAAGAGAATAGCATTGACAC+AGG | + | chr6.1:56826697-56826716 | None:intergenic | 40.0% |
!! | TCCAAATGGTCGTGTTTTTG+GGG | - | chr6.1:56828454-56828473 | MS.gene76984:intron | 40.0% |
!! | TTGTTTTACGCATCAGGTTG+TGG | - | chr6.1:56829165-56829184 | MS.gene76984:CDS | 40.0% |
!!! | ATTGTCGGACCACTTTTTTC+TGG | + | chr6.1:56826219-56826238 | None:intergenic | 40.0% |
!!! | CGTTTTGAAATTGGAACCGA+AGG | + | chr6.1:56825933-56825952 | None:intergenic | 40.0% |
!!! | TGCGAGTTTTTTTCCAGAGA+AGG | - | chr6.1:56829189-56829208 | MS.gene76984:CDS | 40.0% |
!!! | TTTTCAGGTTGGAAAAGTGG+TGG | - | chr6.1:56824639-56824658 | MS.gene76984:intron | 40.0% |
AAAATCTCCGGTCAACGGAA+TGG | + | chr6.1:56824622-56824641 | None:intergenic | 45.0% | |
AACGGAATGGAAGCCGAAAT+TGG | + | chr6.1:56824609-56824628 | None:intergenic | 45.0% | |
AAGGGGTTGGAGTATGATTG+AGG | + | chr6.1:56826365-56826384 | None:intergenic | 45.0% | |
AGAATGAGTGTCTCATTGGC+AGG | - | chr6.1:56828431-56828450 | MS.gene76984:intron | 45.0% | |
AGGCCTAGAAAGAGTGAATC+TGG | - | chr6.1:56824558-56824577 | MS.gene76984:CDS | 45.0% | |
ATGGAAGCCGAAATTGGCAT+CGG | + | chr6.1:56824603-56824622 | None:intergenic | 45.0% | |
CACGTGTCTGTGTCTAACAT+TGG | + | chr6.1:56827971-56827990 | None:intergenic | 45.0% | |
CAGAGAAGGAGAATCCAAAG+AGG | - | chr6.1:56829203-56829222 | MS.gene76984:CDS | 45.0% | |
CCTGAAAAATCTCCGGTCAA+CGG | + | chr6.1:56824627-56824646 | None:intergenic | 45.0% | |
CTCTTTGGATTCTCCTTCTC+TGG | + | chr6.1:56829205-56829224 | None:intergenic | 45.0% | |
CTGGCAGCACATACAAAGAA+GGG | + | chr6.1:56826200-56826219 | None:intergenic | 45.0% | |
GAAGCAAAGTTAAAACCGGC+CGG | + | chr6.1:56829343-56829362 | None:intergenic | 45.0% | |
GAATGTAACACTTCGCCAGT+CGG | - | chr6.1:56827493-56827512 | MS.gene76984:intron | 45.0% | |
GAGTGAATCTGGAAGTAAGC+CGG | - | chr6.1:56824569-56824588 | MS.gene76984:CDS | 45.0% | |
GCAAGGACAGTTCAGATTGA+AGG | + | chr6.1:56828694-56828713 | None:intergenic | 45.0% | |
GGATTGACAAAGAGCAGATC+TGG | - | chr6.1:56828407-56828426 | MS.gene76984:intron | 45.0% | |
GTGGCATGCAACAATTCCAA+GGG | - | chr6.1:56828047-56828066 | MS.gene76984:intron | 45.0% | |
GTTGTCACCGATGCCAATTT+CGG | - | chr6.1:56824593-56824612 | MS.gene76984:CDS | 45.0% | |
TCTGGCAGCACATACAAAGA+AGG | + | chr6.1:56826201-56826220 | None:intergenic | 45.0% | |
TCTGTGTCTAATGCATCACC+TGG | - | chr6.1:56825689-56825708 | MS.gene76984:intron | 45.0% | |
TGACACTCACACATCAACAC+CGG | + | chr6.1:56825375-56825394 | None:intergenic | 45.0% | |
TGGCAACTCATCATCATCTG+CGG | - | chr6.1:56829384-56829403 | MS.gene76984:CDS | 45.0% | |
TGGCAGCACATACAAAGAAG+GGG | + | chr6.1:56826199-56826218 | None:intergenic | 45.0% | |
TGTGGAGGTGAAGAAGAAGA+GGG | - | chr6.1:56824533-56824552 | MS.gene76984:CDS | 45.0% | |
TGTGGCATGCAACAATTCCA+AGG | - | chr6.1:56828046-56828065 | MS.gene76984:intron | 45.0% | |
TGTTAGACACAGACACGTGT+TGG | - | chr6.1:56827972-56827991 | MS.gene76984:intron | 45.0% | |
! | GCAATTAACAGAGAGTGTGG+TGG | - | chr6.1:56826266-56826285 | MS.gene76984:intron | 45.0% |
! | GGTCCAAATGGTCGTGTTTT+TGG | - | chr6.1:56828452-56828471 | MS.gene76984:intron | 45.0% |
! | GTGACAACAATTGGCTCCAT+TGG | - | chr6.1:56827128-56827147 | MS.gene76984:intron | 45.0% |
! | GTTCAGATTGAAGGCGTGTT+CGG | + | chr6.1:56828685-56828704 | None:intergenic | 45.0% |
! | TTGAATTTTGCTGGGTCCAC+CGG | - | chr6.1:56824477-56824496 | MS.gene76984:CDS | 45.0% |
!! | AATTTGCTGAGCAGTGGCAA+GGG | + | chr6.1:56826389-56826408 | None:intergenic | 45.0% |
!! | ACACTGGTGCTGATTGATGA+TGG | - | chr6.1:56828778-56828797 | MS.gene76984:intron | 45.0% |
!! | GAGAACAATTTGCTGAGCAG+TGG | + | chr6.1:56826395-56826414 | None:intergenic | 45.0% |
!! | GGTGCTGATTGATGATGGTA+AGG | - | chr6.1:56828783-56828802 | MS.gene76984:intron | 45.0% |
!! | TGAACTATGAAGCACTGACG+TGG | - | chr6.1:56828566-56828585 | MS.gene76984:intron | 45.0% |
!!! | CCAAATGGTCGTGTTTTTGG+GGG | - | chr6.1:56828455-56828474 | MS.gene76984:intron | 45.0% |
!!! | TGACCGGAGATTTTTCAGGT+TGG | - | chr6.1:56824628-56824647 | MS.gene76984:intron | 45.0% |
!!! | AAATATCATATATTTTAAAA+AGG | + | chr6.1:56826176-56826195 | None:intergenic | 5.0% |
!!! | AATATCATATATTTTAAAAA+GGG | + | chr6.1:56826175-56826194 | None:intergenic | 5.0% |
AAACCGGCCGGTGACATTAT+AGG | + | chr6.1:56829331-56829350 | None:intergenic | 50.0% | |
AAGCCTATAATGTCACCGGC+CGG | - | chr6.1:56829325-56829344 | MS.gene76984:CDS | 50.0% | |
ACACGACACATGTCCGATAC+CGG | - | chr6.1:56825237-56825256 | MS.gene76984:intron | 50.0% | |
AGCCAAATTGAAGCCAGGTG+GGG | + | chr6.1:56824448-56824467 | None:intergenic | 50.0% | |
AGGAGAATCCAAAGAGGCAG+AGG | - | chr6.1:56829209-56829228 | MS.gene76984:CDS | 50.0% | |
ATGATGAGTTGCCAGAGCCT+TGG | + | chr6.1:56829378-56829397 | None:intergenic | 50.0% | |
CCCCCAAAAACACGACCATT+TGG | + | chr6.1:56828458-56828477 | None:intergenic | 50.0% | |
GACATCCTAGAACATGCCAG+AGG | + | chr6.1:56827399-56827418 | None:intergenic | 50.0% | |
GAGCCAAATTGAAGCCAGGT+GGG | + | chr6.1:56824449-56824468 | None:intergenic | 50.0% | |
GCACAGACACTCCTCAGATT+AGG | + | chr6.1:56825269-56825288 | None:intergenic | 50.0% | |
GGAGAATCCAAAGAGGCAGA+GGG | - | chr6.1:56829210-56829229 | MS.gene76984:CDS | 50.0% | |
GTCTCATTGGCAGGTCCAAA+TGG | - | chr6.1:56828440-56828459 | MS.gene76984:intron | 50.0% | |
GTGGAGGTGAAGAAGAAGAG+GGG | - | chr6.1:56824534-56824553 | MS.gene76984:CDS | 50.0% | |
GTGTGGAGGTGAAGAAGAAG+AGG | - | chr6.1:56824532-56824551 | MS.gene76984:CDS | 50.0% | |
GTTAAATGCCAGTGGTCGGT+GGG | - | chr6.1:56826116-56826135 | MS.gene76984:intron | 50.0% | |
TGAGCCAAATTGAAGCCAGG+TGG | + | chr6.1:56824450-56824469 | None:intergenic | 50.0% | |
TGGCGGTACTTCAACGTATG+AGG | - | chr6.1:56827523-56827542 | MS.gene76984:intron | 50.0% | |
TGTTAAATGCCAGTGGTCGG+TGG | - | chr6.1:56826115-56826134 | MS.gene76984:intron | 50.0% | |
TTAAATGCCAGTGGTCGGTG+GGG | - | chr6.1:56826117-56826136 | MS.gene76984:intron | 50.0% | |
! | CCGTTGACCGGAGATTTTTC+AGG | - | chr6.1:56824624-56824643 | MS.gene76984:intron | 50.0% |
! | GCTTCTTTTGGCAATGGCCA+AGG | - | chr6.1:56829358-56829377 | MS.gene76984:CDS | 50.0% |
!! | AAGATGTGGGGTGTTGGAAG+GGG | - | chr6.1:56824976-56824995 | MS.gene76984:intron | 50.0% |
!! | ATGAAGCACTGACGTGGACA+TGG | - | chr6.1:56828572-56828591 | MS.gene76984:intron | 50.0% |
!! | CAATTTGCTGAGCAGTGGCA+AGG | + | chr6.1:56826390-56826409 | None:intergenic | 50.0% |
!! | GAAGATGTGGGGTGTTGGAA+GGG | - | chr6.1:56824975-56824994 | MS.gene76984:intron | 50.0% |
!! | TCAGGTTGGAAAAGTGGTGG+TGG | - | chr6.1:56824642-56824661 | MS.gene76984:intron | 50.0% |
!! | TGAAGATGTGGGGTGTTGGA+AGG | - | chr6.1:56824974-56824993 | MS.gene76984:intron | 50.0% |
AATGTTAACCAGGCCCCACC+TGG | - | chr6.1:56824432-56824451 | MS.gene76984:CDS | 55.0% | |
ACTGACGTGGACATGGACAC+GGG | - | chr6.1:56828579-56828598 | MS.gene76984:intron | 55.0% | |
AGAAACCGGCGGCAAGAGAA+AGG | - | chr6.1:56827210-56827229 | MS.gene76984:intron | 55.0% | |
AGGTGAAGAAGAAGAGGGGC+AGG | - | chr6.1:56824538-56824557 | MS.gene76984:CDS | 55.0% | |
CAATCCCTTTCTCTTGCCGC+CGG | + | chr6.1:56827218-56827237 | None:intergenic | 55.0% | |
CACGAACACCAGACACGACA+CGG | - | chr6.1:56825139-56825158 | MS.gene76984:intron | 55.0% | |
CACGACACATGTCCGATACC+GGG | - | chr6.1:56825238-56825257 | MS.gene76984:intron | 55.0% | |
CACTGACGTGGACATGGACA+CGG | - | chr6.1:56828578-56828597 | MS.gene76984:intron | 55.0% | |
CTGAGCAGTGGCAAGGGAAA+GGG | + | chr6.1:56826383-56826402 | None:intergenic | 55.0% | |
CTTCTTCACCTCCACACCAC+CGG | + | chr6.1:56824529-56824548 | None:intergenic | 55.0% | |
GAAACCGGCGGCAAGAGAAA+GGG | - | chr6.1:56827211-56827230 | MS.gene76984:intron | 55.0% | |
GAGGCAGAGGGTCGATCATT+CGG | - | chr6.1:56829222-56829241 | MS.gene76984:CDS | 55.0% | |
GATGATGTAGGAGGGGCAGT+TGG | + | chr6.1:56829250-56829269 | None:intergenic | 55.0% | |
GATTAGGCGTGTCCCGGTAT+CGG | + | chr6.1:56825253-56825272 | None:intergenic | 55.0% | |
GTCAATGTCCGTGTCGTGTC+TGG | + | chr6.1:56825150-56825169 | None:intergenic | 55.0% | |
TCCTCAGATTAGGCGTGTCC+CGG | + | chr6.1:56825259-56825278 | None:intergenic | 55.0% | |
TCGGCTTCCATTCCGTTGAC+CGG | - | chr6.1:56824612-56824631 | MS.gene76984:CDS | 55.0% | |
TGAGCAGTGGCAAGGGAAAG+GGG | + | chr6.1:56826382-56826401 | None:intergenic | 55.0% | |
TGATCGACCCTCTGCCTCTT+TGG | + | chr6.1:56829220-56829239 | None:intergenic | 55.0% | |
TGGTATGACACCGGCACATG+TGG | + | chr6.1:56827951-56827970 | None:intergenic | 55.0% | |
TTTGGCAATGGCCAAGGCTC+TGG | - | chr6.1:56829364-56829383 | MS.gene76984:CDS | 55.0% | |
!! | AAAAGTGGTGGTGGTGGAGG+TGG | - | chr6.1:56824651-56824670 | MS.gene76984:intron | 55.0% |
!! | ATTGGCATCGGTGACAACGC+CGG | + | chr6.1:56824591-56824610 | None:intergenic | 55.0% |
!! | GGTTGGAAAAGTGGTGGTGG+TGG | - | chr6.1:56824645-56824664 | MS.gene76984:intron | 55.0% |
!! | TGGAAAAGTGGTGGTGGTGG+AGG | - | chr6.1:56824648-56824667 | MS.gene76984:intron | 55.0% |
!!! | TCGTGTTTTTGGGGGTGCAC+TGG | - | chr6.1:56828463-56828482 | MS.gene76984:intron | 55.0% |
AATTGAAGCCAGGTGGGGCC+TGG | + | chr6.1:56824443-56824462 | None:intergenic | 60.0% | |
ACCGGGACACGCCTAATCTG+AGG | - | chr6.1:56825255-56825274 | MS.gene76984:intron | 60.0% | |
CAGTGGCAAGGGAAAGGGGT+TGG | + | chr6.1:56826378-56826397 | None:intergenic | 60.0% | |
CTTCGCCAGTCGGATGCTTG+TGG | - | chr6.1:56827503-56827522 | MS.gene76984:intron | 60.0% | |
GCTGAGCAGTGGCAAGGGAA+AGG | + | chr6.1:56826384-56826403 | None:intergenic | 60.0% | |
GGCCCCACCTGGCTTCAATT+TGG | - | chr6.1:56824443-56824462 | MS.gene76984:CDS | 60.0% | |
TACCGCCACAAGCATCCGAC+TGG | + | chr6.1:56827511-56827530 | None:intergenic | 60.0% | |
TGGGTCCACCGGAGAGTTAC+CGG | - | chr6.1:56824488-56824507 | MS.gene76984:CDS | 60.0% | |
!! | GCTGGTTTGCTGGTAGCTGC+TGG | - | chr6.1:56828485-56828504 | MS.gene76984:intron | 60.0% |
!! | GGTAGCTGCTGGTTCTGTGC+AGG | - | chr6.1:56828496-56828515 | MS.gene76984:intron | 60.0% |
!! | GTTTTTGGGGGTGCACTGGC+TGG | - | chr6.1:56828467-56828486 | MS.gene76984:intron | 60.0% |
ACCTCCACACCACCGGCAAC+CGG | + | chr6.1:56824522-56824541 | None:intergenic | 65.0% | |
ATGCCAGTGGTCGGTGGGGT+TGG | - | chr6.1:56826121-56826140 | MS.gene76984:intron | 65.0% | |
CACCGGAGCCGGTAACTCTC+CGG | + | chr6.1:56824499-56824518 | None:intergenic | 65.0% | |
CGCCAGTCGGATGCTTGTGG+CGG | - | chr6.1:56827506-56827525 | MS.gene76984:intron | 65.0% | |
!! | AGAGTTACCGGCTCCGGTGC+CGG | - | chr6.1:56824500-56824519 | MS.gene76984:CDS | 65.0% |
!! | AGTGGTGGTGGTGGAGGTGG+AGG | - | chr6.1:56824654-56824673 | MS.gene76984:intron | 65.0% |
!! | CACCGGAGAGTTACCGGCTC+CGG | - | chr6.1:56824494-56824513 | MS.gene76984:CDS | 65.0% |
!! | GGGTGCACTGGCTGGTTTGC+TGG | - | chr6.1:56828475-56828494 | MS.gene76984:intron | 65.0% |
ACACCACCGGCAACCGGCAC+CGG | + | chr6.1:56824516-56824535 | None:intergenic | 70.0% | |
CGGAGCCGGTAACTCTCCGG+TGG | + | chr6.1:56824496-56824515 | None:intergenic | 70.0% | |
GGACCAACCCCACCGACCAC+TGG | + | chr6.1:56826127-56826146 | None:intergenic | 70.0% | |
GCCGGTTGCCGGTGGTGTGG+AGG | - | chr6.1:56824518-56824537 | MS.gene76984:CDS | 75.0% | |
!! | GGTCGGTGGGGTTGGTCCCC+CGG | - | chr6.1:56826129-56826148 | MS.gene76984:intron | 75.0% |
!! | GGTGCCGGTTGCCGGTGGTG+TGG | - | chr6.1:56824515-56824534 | MS.gene76984:CDS | 75.0% |
!! | CCGGCAACCGGCACCGGAGC+CGG | + | chr6.1:56824510-56824529 | None:intergenic | 80.0% |
!!! | CCGGCTCCGGTGCCGGTTGC+CGG | - | chr6.1:56824507-56824526 | MS.gene76984:CDS | 80.0% |
!!! | GCTCCGGTGCCGGTTGCCGG+TGG | - | chr6.1:56824510-56824529 | MS.gene76984:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 56824393 | 56829429 | 56824393 | ID=MS.gene76984 |
chr6.1 | mRNA | 56824393 | 56829429 | 56824393 | ID=MS.gene76984.t1;Parent=MS.gene76984 |
chr6.1 | exon | 56829072 | 56829429 | 56829072 | ID=MS.gene76984.t1.exon1;Parent=MS.gene76984.t1 |
chr6.1 | CDS | 56829072 | 56829429 | 56829072 | ID=cds.MS.gene76984.t1;Parent=MS.gene76984.t1 |
chr6.1 | exon | 56827843 | 56827907 | 56827843 | ID=MS.gene76984.t1.exon2;Parent=MS.gene76984.t1 |
chr6.1 | CDS | 56827843 | 56827907 | 56827843 | ID=cds.MS.gene76984.t1;Parent=MS.gene76984.t1 |
chr6.1 | exon | 56826278 | 56826409 | 56826278 | ID=MS.gene76984.t1.exon3;Parent=MS.gene76984.t1 |
chr6.1 | CDS | 56826278 | 56826409 | 56826278 | ID=cds.MS.gene76984.t1;Parent=MS.gene76984.t1 |
chr6.1 | exon | 56825305 | 56825466 | 56825305 | ID=MS.gene76984.t1.exon4;Parent=MS.gene76984.t1 |
chr6.1 | CDS | 56825305 | 56825466 | 56825305 | ID=cds.MS.gene76984.t1;Parent=MS.gene76984.t1 |
chr6.1 | exon | 56824393 | 56824641 | 56824393 | ID=MS.gene76984.t1.exon5;Parent=MS.gene76984.t1 |
chr6.1 | CDS | 56824393 | 56824641 | 56824393 | ID=cds.MS.gene76984.t1;Parent=MS.gene76984.t1 |
Gene Sequence |
Protein sequence |