Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77008.t1 | XP_013455198.1 | 98.7 | 378 | 5 | 0 | 1 | 378 | 1 | 378 | 1.60E-204 | 721.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77008.t1 | Q3E875 | 70.9 | 378 | 108 | 1 | 1 | 378 | 1 | 376 | 1.3e-146 | 520.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77008.t1 | A0A072UHJ4 | 98.7 | 378 | 5 | 0 | 1 | 378 | 1 | 378 | 1.1e-204 | 721.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059965 | MS.gene77008 | 0.801534 | 8.60E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene77008 | 0.806426 | 8.27E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77008.t1 | MTR_4g029530 | 98.677 | 378 | 5 | 0 | 1 | 378 | 1 | 378 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77008.t1 | AT5G61530 | 70.899 | 378 | 108 | 1 | 1 | 378 | 1 | 376 | 0.0 | 557 |
| MS.gene77008.t1 | AT5G61530 | 68.783 | 378 | 107 | 2 | 1 | 378 | 1 | 367 | 0.0 | 534 |
| MS.gene77008.t1 | AT5G61530 | 68.783 | 378 | 107 | 2 | 1 | 378 | 1 | 367 | 0.0 | 534 |
| MS.gene77008.t1 | AT5G61530 | 70.670 | 358 | 103 | 1 | 21 | 378 | 21 | 376 | 0.0 | 521 |
| MS.gene77008.t1 | AT5G61530 | 72.924 | 277 | 75 | 0 | 1 | 277 | 1 | 277 | 2.26e-149 | 424 |
Find 89 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTACCTTATAGTTTC+AGG | 0.224726 | 4.2:-74608168 | MS.gene77008:intron |
| CAGTATTGACGATAAATTTC+AGG | 0.256557 | 4.2:+74606162 | None:intergenic |
| TGCATCTTCTCTTATTCCTT+TGG | 0.272162 | 4.2:-74605094 | MS.gene77008:CDS |
| AAGTCGGTGGGCACGTCTTC+AGG | 0.278314 | 4.2:-74608992 | MS.gene77008:CDS |
| CAAGTAGTTGAACCAGCTTC+TGG | 0.282133 | 4.2:+74606099 | None:intergenic |
| TCGAAATACCTTGGTTGTAT+AGG | 0.301437 | 4.2:+74607966 | None:intergenic |
| TAAATCTGAAGGGGACAAAA+AGG | 0.312157 | 4.2:-74608008 | MS.gene77008:CDS |
| TCAGAAGTCACTTCTCAATA+AGG | 0.338907 | 4.2:-74607642 | MS.gene77008:intron |
| CGAAATACCTTGGTTGTATA+GGG | 0.351202 | 4.2:+74607967 | None:intergenic |
| CTGAAATTTATCGTCAATAC+TGG | 0.352388 | 4.2:-74606161 | MS.gene77008:CDS |
| AAAAGCTACCTGAAACTATA+AGG | 0.355497 | 4.2:+74608160 | None:intergenic |
| CAGAAGCTGGTTCAACTACT+TGG | 0.360589 | 4.2:-74606098 | MS.gene77008:CDS |
| ACAAGAGCTGCTACATCAAC+TGG | 0.363894 | 4.2:+74607833 | None:intergenic |
| TCCAATGTGGTCAGTGGCTC+AGG | 0.371441 | 4.2:+74607788 | None:intergenic |
| TCAACTGGATTTGAGCCTTC+TGG | 0.372040 | 4.2:+74607848 | None:intergenic |
| ACTACTTGGGACATGCTTGC+TGG | 0.384920 | 4.2:-74606084 | MS.gene77008:intron |
| GAATCAGCGGGAACGTTTGT+TGG | 0.388056 | 4.2:-74609081 | MS.gene77008:CDS |
| CCACATTACCTCTTCAACCT+TGG | 0.389178 | 4.2:+74608855 | None:intergenic |
| TCTCTTATTCCTTTGGATGA+AGG | 0.409750 | 4.2:-74605087 | MS.gene77008:CDS |
| ACCTGTTATCATGTGGCAAA+AGG | 0.410592 | 4.2:-74606193 | MS.gene77008:CDS |
| TTCTGGATTCAAGCTCTGTT+TGG | 0.412177 | 4.2:+74606116 | None:intergenic |
| GACAAAAGAGAAGGTGGTTG+TGG | 0.420557 | 4.2:-74608884 | MS.gene77008:CDS |
| TTGACTAGTATCTGAGGAAT+AGG | 0.426698 | 4.2:+74608195 | None:intergenic |
| GCTGAAGTGGCGGGAAAAGT+TGG | 0.432879 | 4.2:-74609027 | MS.gene77008:CDS |
| TTCCTGAGGAGAGGTTTGTC+AGG | 0.437700 | 4.2:-74608907 | MS.gene77008:CDS |
| ACAAAAGAGAAGGTGGTTGT+GGG | 0.439320 | 4.2:-74608883 | MS.gene77008:CDS |
| TCGGAGCCTTGCAATGGAAA+TGG | 0.446102 | 4.2:-74606217 | MS.gene77008:CDS |
| ACCTTGTTCAGATGGACTCT+CGG | 0.451737 | 4.2:-74606236 | MS.gene77008:intron |
| TCGATTGCACCGAAGTCAAC+TGG | 0.452453 | 4.2:+74605060 | None:intergenic |
| CAGTGTGAACTATATGACTT+TGG | 0.469482 | 4.2:-74607696 | MS.gene77008:CDS |
| CTGAAGTGGCGGGAAAAGTT+GGG | 0.470673 | 4.2:-74609026 | MS.gene77008:CDS |
| CTCTGTACAGTAATCTCAAT+CGG | 0.472832 | 4.2:+74608234 | None:intergenic |
| AGCTTCCGAGTCAATGCCTT+CGG | 0.486833 | 4.2:-74609280 | None:intergenic |
| CAGATGCCAACGAGACAGTC+TGG | 0.491595 | 4.2:-74604996 | MS.gene77008:CDS |
| CTCACCTCAGTGGCAAGATA+AGG | 0.494138 | 4.2:-74609253 | MS.gene77008:CDS |
| CCTGTTATCATGTGGCAAAA+GGG | 0.504737 | 4.2:-74606192 | MS.gene77008:CDS |
| AGACATTGAAAGATGGCAAA+AGG | 0.507271 | 4.2:-74608644 | MS.gene77008:intron |
| GGATTCAAGCTCTGTTTGGA+AGG | 0.507953 | 4.2:+74606120 | None:intergenic |
| AGCGGGAACGTTTGTTGGCG+AGG | 0.509352 | 4.2:-74609076 | MS.gene77008:CDS |
| TCCCTGACAAACCTCTCCTC+AGG | 0.510117 | 4.2:+74608905 | None:intergenic |
| GTCTACAAGACATGCTGTAC+AGG | 0.511268 | 4.2:-74608965 | MS.gene77008:CDS |
| ATATCAGCTGCTGCTACGAC+TGG | 0.540673 | 4.2:-74608934 | MS.gene77008:CDS |
| GGTCAAGCTTAAAGAAGCTA+AGG | 0.542829 | 4.2:-74609103 | MS.gene77008:CDS |
| TCATTTCCAGACTGTCTCGT+TGG | 0.544319 | 4.2:+74604990 | None:intergenic |
| CAGAGCTTGAATCCAGAAGC+TGG | 0.551239 | 4.2:-74606111 | MS.gene77008:CDS |
| GGACTCTCGGAGCCTTGCAA+TGG | 0.560561 | 4.2:-74606223 | MS.gene77008:CDS |
| AATAAGAGAAGATGCATCCA+TGG | 0.561442 | 4.2:+74605101 | None:intergenic |
| GAGCTTTATAATGAGATCAA+AGG | 0.565606 | 4.2:-74607767 | MS.gene77008:CDS |
| AAAGAGTAATGTAGCTGAAG+TGG | 0.566162 | 4.2:-74609040 | MS.gene77008:CDS |
| TCAACTGCTGCAGTGCCAGA+AGG | 0.567311 | 4.2:-74607863 | MS.gene77008:CDS |
| CAAAAGAGAAGGTGGTTGTG+GGG | 0.567728 | 4.2:-74608882 | MS.gene77008:CDS |
| CAGGTGCCATTTCCATTGCA+AGG | 0.570190 | 4.2:+74606211 | None:intergenic |
| AAAGAAGCTAAGGAATCAGC+GGG | 0.570777 | 4.2:-74609093 | MS.gene77008:CDS |
| ACTGGCATGCCTTCATCCAA+AGG | 0.571508 | 4.2:+74605078 | None:intergenic |
| TCCTGAGCCACTGACCACAT+TGG | 0.580818 | 4.2:-74607789 | MS.gene77008:CDS |
| AGAAGCTGGTTCAACTACTT+GGG | 0.589742 | 4.2:-74606097 | MS.gene77008:CDS |
| CAGGGAGTTGCTAAAACTGA+CGG | 0.591352 | 4.2:-74608527 | MS.gene77008:intron |
| AGTAATGTAGCTGAAGTGGC+GGG | 0.592358 | 4.2:-74609036 | MS.gene77008:CDS |
| GAAGGCATGCCAGTTGACTT+CGG | 0.597065 | 4.2:-74605069 | MS.gene77008:CDS |
| TCCTGAGGAGAGGTTTGTCA+GGG | 0.599140 | 4.2:-74608906 | MS.gene77008:CDS |
| TCTTGACAGACATTGAAAGA+TGG | 0.604203 | 4.2:-74608651 | MS.gene77008:CDS |
| GTCAGGGACAAAAGAGAAGG+TGG | 0.606025 | 4.2:-74608890 | MS.gene77008:CDS |
| CACTGAGGTGAGATTACCGA+AGG | 0.608101 | 4.2:+74609264 | None:intergenic |
| GGACGGTATTCAAAAGTCGG+TGG | 0.609947 | 4.2:-74609005 | MS.gene77008:CDS |
| CTACGACTGGTGCATTCCTG+AGG | 0.619975 | 4.2:-74608921 | MS.gene77008:CDS |
| GGTGGTTGTGGGGAAATCCA+AGG | 0.621706 | 4.2:-74608872 | MS.gene77008:CDS |
| TAAAGCTCCAATGTGGTCAG+TGG | 0.623875 | 4.2:+74607782 | None:intergenic |
| CAAAGTCATATAGTTCACAC+TGG | 0.624006 | 4.2:+74607697 | None:intergenic |
| TTGGGACGGTATTCAAAAGT+CGG | 0.624690 | 4.2:-74609008 | MS.gene77008:CDS |
| GACGGTATTCAAAAGTCGGT+GGG | 0.626060 | 4.2:-74609004 | MS.gene77008:CDS |
| GAGTAATGTAGCTGAAGTGG+CGG | 0.626295 | 4.2:-74609037 | MS.gene77008:CDS |
| GGGGAAATCCAAGGTTGAAG+AGG | 0.631245 | 4.2:-74608863 | MS.gene77008:intron |
| GCACAGTTGACTAGTATCTG+AGG | 0.633991 | 4.2:+74608189 | None:intergenic |
| ACTGGTGCATTCCTGAGGAG+AGG | 0.636539 | 4.2:-74608916 | MS.gene77008:CDS |
| TGCAGACGAGAGTGAAGCCA+TGG | 0.637614 | 4.2:-74605118 | MS.gene77008:intron |
| TGTACAGCATGTCTTGTAGA+CGG | 0.639114 | 4.2:+74608967 | None:intergenic |
| TTTGTCAGGGACAAAAGAGA+AGG | 0.643608 | 4.2:-74608893 | MS.gene77008:CDS |
| ATGTGGTCAGTGGCTCAGGA+AGG | 0.645915 | 4.2:+74607792 | None:intergenic |
| TAAAGAAGCTAAGGAATCAG+CGG | 0.649713 | 4.2:-74609094 | MS.gene77008:CDS |
| GTTTGTTGGCGAGGTCACAA+AGG | 0.656145 | 4.2:-74609067 | MS.gene77008:CDS |
| CTCGCCTTATCTTGCCACTG+AGG | 0.661591 | 4.2:+74609249 | None:intergenic |
| CGATTGAGATTACTGTACAG+AGG | 0.667858 | 4.2:-74608233 | MS.gene77008:CDS |
| CAGTGGCAAGATAAGGCGAG+TGG | 0.672268 | 4.2:-74609246 | MS.gene77008:CDS |
| AGTGGCGGGAAAAGTTGGGA+CGG | 0.689419 | 4.2:-74609022 | MS.gene77008:CDS |
| CTCATTATAAAGCTCCAATG+TGG | 0.698623 | 4.2:+74607775 | None:intergenic |
| CTTCGGTAATCTCACCTCAG+TGG | 0.700878 | 4.2:-74609263 | MS.gene77008:CDS |
| TTGGTTGCCCTATACAACCA+AGG | 0.705842 | 4.2:-74607974 | MS.gene77008:intron |
| ACTAGCACGAAGCAAAAGTG+CGG | 0.732968 | 4.2:+74607664 | None:intergenic |
| AAATGGCACCTGTTATCATG+TGG | 0.743338 | 4.2:-74606200 | MS.gene77008:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAAATTCAAAAGT+GGG | - | chr4.2:74608652-74608671 | MS.gene77008:CDS | 10.0% |
| !! | GCAAAAAAAAAAAAAAAAAA+AGG | + | chr4.2:74605711-74605730 | None:intergenic | 10.0% |
| !! | TAATTATAAAAATTCAAAAG+TGG | - | chr4.2:74608651-74608670 | MS.gene77008:CDS | 10.0% |
| !! | TACTATTTAATAAATATGTA+TGG | - | chr4.2:74606718-74606737 | MS.gene77008:intron | 10.0% |
| !!! | CTATAATTTTATTTCTATAT+TGG | - | chr4.2:74608351-74608370 | MS.gene77008:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGCA+GGG | - | chr4.2:74605712-74605731 | MS.gene77008:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTTGC+AGG | - | chr4.2:74605711-74605730 | MS.gene77008:intron | 10.0% |
| !! | AAACAAGAAAATAAGATATA+TGG | + | chr4.2:74609113-74609132 | None:intergenic | 15.0% |
| !! | TATTTAATAAATATGTATGG+TGG | - | chr4.2:74606721-74606740 | MS.gene77008:intron | 15.0% |
| !! | TATTTATAAAGTCATACATA+TGG | - | chr4.2:74607250-74607269 | MS.gene77008:intron | 15.0% |
| !! | TCAAATATAAATTCAATGTA+GGG | - | chr4.2:74605132-74605151 | MS.gene77008:intron | 15.0% |
| !! | TTACATAAAATTCATTATGT+AGG | - | chr4.2:74608227-74608246 | MS.gene77008:CDS | 15.0% |
| !! | TTCAAATATAAATTCAATGT+AGG | - | chr4.2:74605131-74605150 | MS.gene77008:intron | 15.0% |
| !!! | AACAAAATTTTAACGTATTA+AGG | + | chr4.2:74607734-74607753 | None:intergenic | 15.0% |
| !!! | ATTCAATTTACTTTTGAAAT+GGG | + | chr4.2:74606846-74606865 | None:intergenic | 15.0% |
| !!! | TAATTACTTAATTACGTTTT+AGG | + | chr4.2:74606793-74606812 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGTTACTGAACA+CGG | + | chr4.2:74607774-74607793 | None:intergenic | 20.0% |
| !! | AAATATAATTAGTGCTAACT+TGG | + | chr4.2:74605478-74605497 | None:intergenic | 20.0% |
| !! | AAGAAAGTCTAAATTAAACT+AGG | + | chr4.2:74607643-74607662 | None:intergenic | 20.0% |
| !! | ATGTAAATAATCACATGTTT+AGG | + | chr4.2:74608213-74608232 | None:intergenic | 20.0% |
| !! | CAAATATAAATTCAATGTAG+GGG | - | chr4.2:74605133-74605152 | MS.gene77008:intron | 20.0% |
| !! | GATCAAACAACAAAATAATA+AGG | + | chr4.2:74607134-74607153 | None:intergenic | 20.0% |
| !! | TAATTTAGACTTTCTTCTAA+TGG | - | chr4.2:74607647-74607666 | MS.gene77008:CDS | 20.0% |
| !! | TATAAGAGAAACTATTAAGA+AGG | - | chr4.2:74607479-74607498 | MS.gene77008:intron | 20.0% |
| !!! | AAAAGTCATTTTTCATTACT+TGG | + | chr4.2:74608560-74608579 | None:intergenic | 20.0% |
| !!! | AAAATTTTGTTTTGACTTGT+AGG | - | chr4.2:74607743-74607762 | MS.gene77008:CDS | 20.0% |
| !!! | ATATCTTTTTAAATCTGAAG+GGG | - | chr4.2:74606240-74606259 | MS.gene77008:intron | 20.0% |
| !!! | CATATCTTTTTAAATCTGAA+GGG | - | chr4.2:74606239-74606258 | MS.gene77008:intron | 20.0% |
| !!! | CATTTTTTCTTTGTTTTAGT+TGG | - | chr4.2:74605528-74605547 | MS.gene77008:intron | 20.0% |
| !!! | GATTCAATTTACTTTTGAAA+TGG | + | chr4.2:74606847-74606866 | None:intergenic | 20.0% |
| !!! | GTAATTAACTTTTTTTTGCT+TGG | - | chr4.2:74606806-74606825 | MS.gene77008:intron | 20.0% |
| !!! | TTGATTTGTTTTCATATGTT+GGG | - | chr4.2:74606933-74606952 | MS.gene77008:intron | 20.0% |
| !!! | TTTGATTTGTTTTCATATGT+TGG | - | chr4.2:74606932-74606951 | MS.gene77008:intron | 20.0% |
| !!! | TTTTTTAGAATGATCTATAC+TGG | + | chr4.2:74605675-74605694 | None:intergenic | 20.0% |
| ! | AAAGAAGTGAACAATTCAAA+TGG | + | chr4.2:74606905-74606924 | None:intergenic | 25.0% |
| ! | ACAAGTGAGTATTTATTTGA+CGG | - | chr4.2:74605778-74605797 | MS.gene77008:intron | 25.0% |
| ! | ACTTCTATTGAACTAAAACT+TGG | - | chr4.2:74609056-74609075 | MS.gene77008:CDS | 25.0% |
| ! | AGTATTTATTTGACGGAAAT+GGG | - | chr4.2:74605785-74605804 | MS.gene77008:intron | 25.0% |
| ! | ATTTCTATATTGGCAATTTG+AGG | - | chr4.2:74608361-74608380 | MS.gene77008:intron | 25.0% |
| ! | CAAAAGTTTGATTGTTCTTA+AGG | + | chr4.2:74607945-74607964 | None:intergenic | 25.0% |
| ! | CCTTCAGATTTAAAAAGATA+TGG | + | chr4.2:74606241-74606260 | None:intergenic | 25.0% |
| ! | GAAAAAAAGACTAGAATAGA+AGG | + | chr4.2:74607800-74607819 | None:intergenic | 25.0% |
| ! | GGTCATGTATTTAACAAAAT+TGG | - | chr4.2:74606954-74606973 | MS.gene77008:intron | 25.0% |
| ! | TAATGAATTTGAGAAAGAGA+TGG | - | chr4.2:74607512-74607531 | MS.gene77008:intron | 25.0% |
| ! | TAGTCAATATAGAAATACTC+TGG | - | chr4.2:74608820-74608839 | MS.gene77008:intron | 25.0% |
| ! | TATAAAGTCATACATATGGT+TGG | - | chr4.2:74607254-74607273 | MS.gene77008:intron | 25.0% |
| !! | AAAAAAGTTAGTTTAACTGC+TGG | - | chr4.2:74609026-74609045 | MS.gene77008:CDS | 25.0% |
| !! | AAAGTGCAATTGAAATCTTT+TGG | - | chr4.2:74608853-74608872 | MS.gene77008:intron | 25.0% |
| !! | CCATATCTTTTTAAATCTGA+AGG | - | chr4.2:74606238-74606257 | MS.gene77008:intron | 25.0% |
| !! | CGAATACTATTTGAAATGTA+GGG | - | chr4.2:74607207-74607226 | MS.gene77008:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | chr4.2:74607471-74607490 | None:intergenic | 25.0% |
| !! | GTTTTTCATGGAATAAATGT+TGG | + | chr4.2:74606524-74606543 | None:intergenic | 25.0% |
| !! | TCGAATACTATTTGAAATGT+AGG | - | chr4.2:74607206-74607225 | MS.gene77008:intron | 25.0% |
| !! | TCTTTTAAATGTTTTCTCTC+TGG | + | chr4.2:74608461-74608480 | None:intergenic | 25.0% |
| !!! | AAAAAAAACCACTTTTTGGA+AGG | + | chr4.2:74608500-74608519 | None:intergenic | 25.0% |
| !!! | AAAAAAACCACTTTTTGGAA+GGG | + | chr4.2:74608499-74608518 | None:intergenic | 25.0% |
| !!! | AAAATTGGTTTTGACAGTTT+TGG | - | chr4.2:74606969-74606988 | MS.gene77008:intron | 25.0% |
| !!! | TGTTTTTATTTTCCCATCAT+TGG | - | chr4.2:74607915-74607934 | MS.gene77008:intron | 25.0% |
| AAAAGCTACCTGAAACTATA+AGG | + | chr4.2:74606100-74606119 | None:intergenic | 30.0% | |
| AAAGAATGATCGAAATACCT+TGG | + | chr4.2:74606303-74606322 | None:intergenic | 30.0% | |
| AAATGACAACATTAGAGAGT+TGG | - | chr4.2:74607309-74607328 | MS.gene77008:intron | 30.0% | |
| AACAATGAAAACCCACAATA+AGG | + | chr4.2:74607673-74607692 | None:intergenic | 30.0% | |
| AAGAAACATAGACTGATACA+TGG | + | chr4.2:74606143-74606162 | None:intergenic | 30.0% | |
| AAGACTATTGACATGGTAAA+TGG | - | chr4.2:74607155-74607174 | MS.gene77008:intron | 30.0% | |
| AATGACAACATTAGAGAGTT+GGG | - | chr4.2:74607310-74607329 | MS.gene77008:intron | 30.0% | |
| ACAAAGCAAGTTATACAACT+TGG | + | chr4.2:74607846-74607865 | None:intergenic | 30.0% | |
| ACATAGATAACAAAAGACTC+TGG | + | chr4.2:74605830-74605849 | None:intergenic | 30.0% | |
| ACTCTAATCACAAAATATCC+TGG | - | chr4.2:74608996-74609015 | MS.gene77008:CDS | 30.0% | |
| AGAACCTATAGTAGAAAAGA+TGG | - | chr4.2:74607335-74607354 | MS.gene77008:intron | 30.0% | |
| AGTGAGTGTGAATAATTGTT+TGG | - | chr4.2:74606653-74606672 | MS.gene77008:intron | 30.0% | |
| ATAAGGTGACACTGTTATTA+CGG | - | chr4.2:74608790-74608809 | MS.gene77008:intron | 30.0% | |
| ATACGAGAATGAAGAGATTT+GGG | + | chr4.2:74606757-74606776 | None:intergenic | 30.0% | |
| ATCATATGGAGGATAACTTT+GGG | - | chr4.2:74608415-74608434 | MS.gene77008:intron | 30.0% | |
| CAAAGCAAGTTATACAACTT+GGG | + | chr4.2:74607845-74607864 | None:intergenic | 30.0% | |
| CATATGATCAGATCCTATAT+GGG | + | chr4.2:74608403-74608422 | None:intergenic | 30.0% | |
| CCATGAAAAACATACTTAAG+AGG | - | chr4.2:74606533-74606552 | MS.gene77008:intron | 30.0% | |
| CTAATCTTGTAGTAATTCCA+CGG | - | chr4.2:74606188-74606207 | MS.gene77008:CDS | 30.0% | |
| CTGAAATTTATCGTCAATAC+TGG | - | chr4.2:74608096-74608115 | MS.gene77008:intron | 30.0% | |
| GAATGTTGTGAAGAATATGA+AGG | + | chr4.2:74607091-74607110 | None:intergenic | 30.0% | |
| GAGTATTTATTTGACGGAAA+TGG | - | chr4.2:74605784-74605803 | MS.gene77008:intron | 30.0% | |
| GATCAATTGAAGCTATCATT+CGG | + | chr4.2:74608524-74608543 | None:intergenic | 30.0% | |
| GTTAGATTCTACATGCAAAT+TGG | - | chr4.2:74607971-74607990 | MS.gene77008:intron | 30.0% | |
| TAAGTCATAATATGAGGTAG+AGG | - | chr4.2:74608278-74608297 | MS.gene77008:intron | 30.0% | |
| TACCTCATATTATGACTTAG+AGG | + | chr4.2:74608277-74608296 | None:intergenic | 30.0% | |
| TACTCACTTGTTCAATTATG+TGG | + | chr4.2:74605769-74605788 | None:intergenic | 30.0% | |
| TAGAAATACTCTGGTACTTT+AGG | - | chr4.2:74608829-74608848 | MS.gene77008:intron | 30.0% | |
| TATACGAGAATGAAGAGATT+TGG | + | chr4.2:74606758-74606777 | None:intergenic | 30.0% | |
| TCATTATCATTTGTTTCAGG+TGG | - | chr4.2:74605553-74605572 | MS.gene77008:intron | 30.0% | |
| TTCCTCTAAGTCATAATATG+AGG | - | chr4.2:74608272-74608291 | MS.gene77008:intron | 30.0% | |
| TTGATCAAAGACTATTGACA+TGG | - | chr4.2:74607148-74607167 | MS.gene77008:intron | 30.0% | |
| ! | AAAGTAGACTTAGTTGGTTT+GGG | - | chr4.2:74607361-74607380 | MS.gene77008:intron | 30.0% |
| ! | AATAATTGTTTGGTGGAAGT+GGG | - | chr4.2:74606663-74606682 | MS.gene77008:intron | 30.0% |
| ! | ACCTGAAACAAATGATAATG+AGG | + | chr4.2:74605554-74605573 | None:intergenic | 30.0% |
| ! | CCTCTTAAGTATGTTTTTCA+TGG | + | chr4.2:74606536-74606555 | None:intergenic | 30.0% |
| ! | GAGCTTTATAATGAGATCAA+AGG | - | chr4.2:74606490-74606509 | MS.gene77008:intron | 30.0% |
| ! | GGGTTTTCATTGTTTGAATT+GGG | - | chr4.2:74607679-74607698 | MS.gene77008:CDS | 30.0% |
| ! | GTGGTTGTGTAAATGATTTT+TGG | - | chr4.2:74605421-74605440 | MS.gene77008:intron | 30.0% |
| ! | GTTGTTGTTGTATATTCTCT+GGG | - | chr4.2:74607603-74607622 | MS.gene77008:intron | 30.0% |
| ! | TGGGTTTTCATTGTTTGAAT+TGG | - | chr4.2:74607678-74607697 | MS.gene77008:CDS | 30.0% |
| ! | TGTTGTTGTTGTATATTCTC+TGG | - | chr4.2:74607602-74607621 | MS.gene77008:intron | 30.0% |
| !! | CAGTATTGACGATAAATTTC+AGG | + | chr4.2:74608098-74608117 | None:intergenic | 30.0% |
| !! | CGGAAAAAAAAACCACTTTT+TGG | + | chr4.2:74608504-74608523 | None:intergenic | 30.0% |
| !!! | AGGTAGCTTTTTTTAGAGTA+AGG | - | chr4.2:74606109-74606128 | MS.gene77008:CDS | 30.0% |
| !!! | ATATGTATGGTGGATTCTTT+TGG | - | chr4.2:74606731-74606750 | MS.gene77008:intron | 30.0% |
| !!! | CTAACTTTTTTTAGTCTTCC+AGG | + | chr4.2:74609017-74609036 | None:intergenic | 30.0% |
| !!! | TGTGCATTTCTTTTGTTGTT+TGG | - | chr4.2:74606867-74606886 | MS.gene77008:intron | 30.0% |
| AAAGAGTAATGTAGCTGAAG+TGG | - | chr4.2:74605217-74605236 | MS.gene77008:intron | 35.0% | |
| AAGATCCCTTGTTAGATCAA+CGG | + | chr4.2:74605863-74605882 | None:intergenic | 35.0% | |
| AATAAGAGAAGATGCATCCA+TGG | + | chr4.2:74609159-74609178 | None:intergenic | 35.0% | |
| ACGATTAACTACTAGAATGC+AGG | + | chr4.2:74605972-74605991 | None:intergenic | 35.0% | |
| AGAATATGAAGGTAAGCAGA+TGG | + | chr4.2:74607080-74607099 | None:intergenic | 35.0% | |
| AGACATTGAAAGATGGCAAA+AGG | - | chr4.2:74605613-74605632 | MS.gene77008:intron | 35.0% | |
| ATGTGCACAGATTTAGTGAA+AGG | + | chr4.2:74605057-74605076 | None:intergenic | 35.0% | |
| CAAAAAGGTTATTCAGCAGT+TGG | - | chr4.2:74606264-74606283 | MS.gene77008:intron | 35.0% | |
| CAAAGTCATATAGTTCACAC+TGG | + | chr4.2:74606563-74606582 | None:intergenic | 35.0% | |
| CAGTGTGAACTATATGACTT+TGG | - | chr4.2:74606561-74606580 | MS.gene77008:intron | 35.0% | |
| CCACGGTTGTAATTATATGT+AGG | - | chr4.2:74606205-74606224 | MS.gene77008:CDS | 35.0% | |
| CCATATAGGATCTGATCATA+TGG | - | chr4.2:74608401-74608420 | MS.gene77008:intron | 35.0% | |
| CCATATGATCAGATCCTATA+TGG | + | chr4.2:74608404-74608423 | None:intergenic | 35.0% | |
| CCTACATATAATTACAACCG+TGG | + | chr4.2:74606208-74606227 | None:intergenic | 35.0% | |
| CGAAATACCTTGGTTGTATA+GGG | + | chr4.2:74606293-74606312 | None:intergenic | 35.0% | |
| CTCATTATAAAGCTCCAATG+TGG | + | chr4.2:74606485-74606504 | None:intergenic | 35.0% | |
| CTCCTTACAACAAAATTCAC+AGG | + | chr4.2:74607402-74607421 | None:intergenic | 35.0% | |
| CTCTGTACAGTAATCTCAAT+CGG | + | chr4.2:74606026-74606045 | None:intergenic | 35.0% | |
| GAAAGTAGACTTAGTTGGTT+TGG | - | chr4.2:74607360-74607379 | MS.gene77008:intron | 35.0% | |
| GAAGAATCTGAGCATCAAAT+TGG | + | chr4.2:74605509-74605528 | None:intergenic | 35.0% | |
| GACCTGAAAATGCACTAATA+AGG | - | chr4.2:74608773-74608792 | MS.gene77008:intron | 35.0% | |
| GAGTGTGAATAATTGTTTGG+TGG | - | chr4.2:74606656-74606675 | MS.gene77008:intron | 35.0% | |
| GATCATATGGAGGATAACTT+TGG | - | chr4.2:74608414-74608433 | MS.gene77008:intron | 35.0% | |
| GCAGATTACCTTATAGTTTC+AGG | - | chr4.2:74606089-74606108 | MS.gene77008:CDS | 35.0% | |
| GCCTCATTATCATTTGTTTC+AGG | - | chr4.2:74605550-74605569 | MS.gene77008:intron | 35.0% | |
| GGTATTTCGATCATTCTTTC+AGG | - | chr4.2:74606304-74606323 | MS.gene77008:intron | 35.0% | |
| TAAAGAAGCTAAGGAATCAG+CGG | - | chr4.2:74605163-74605182 | MS.gene77008:intron | 35.0% | |
| TAAATCTGAAGGGGACAAAA+AGG | - | chr4.2:74606249-74606268 | MS.gene77008:intron | 35.0% | |
| TAGTTCCGTTGATCTAACAA+GGG | - | chr4.2:74605855-74605874 | MS.gene77008:intron | 35.0% | |
| TATAGGATCTGATCATATGG+AGG | - | chr4.2:74608404-74608423 | MS.gene77008:intron | 35.0% | |
| TCAGAAGTCACTTCTCAATA+AGG | - | chr4.2:74606615-74606634 | MS.gene77008:intron | 35.0% | |
| TCGAAATACCTTGGTTGTAT+AGG | + | chr4.2:74606294-74606313 | None:intergenic | 35.0% | |
| TCTCTTATTCCTTTGGATGA+AGG | - | chr4.2:74609170-74609189 | MS.gene77008:intron | 35.0% | |
| TCTTGACAGACATTGAAAGA+TGG | - | chr4.2:74605606-74605625 | MS.gene77008:intron | 35.0% | |
| TGCATAACAGTGTGTCAAAA+TGG | + | chr4.2:74605896-74605915 | None:intergenic | 35.0% | |
| TGCATCTTCTCTTATTCCTT+TGG | - | chr4.2:74609163-74609182 | MS.gene77008:intron | 35.0% | |
| TTAATTGCCCTTCCAAAAAG+TGG | - | chr4.2:74608489-74608508 | MS.gene77008:intron | 35.0% | |
| TTGAACAGTTCAACTTCAGT+AGG | + | chr4.2:74608728-74608747 | None:intergenic | 35.0% | |
| TTGACTAGTATCTGAGGAAT+AGG | + | chr4.2:74606065-74606084 | None:intergenic | 35.0% | |
| TTTGAGGAGAATGCCAATAT+AGG | - | chr4.2:74608377-74608396 | MS.gene77008:intron | 35.0% | |
| ! | ATTAACTGATGTTAGCCTCT+TGG | - | chr4.2:74608894-74608913 | MS.gene77008:CDS | 35.0% |
| ! | CACCTTATTAGTGCATTTTC+AGG | + | chr4.2:74608778-74608797 | None:intergenic | 35.0% |
| ! | CAGATCCTTTTAGACAACTT+TGG | + | chr4.2:74608692-74608711 | None:intergenic | 35.0% |
| ! | GAATAATTGTTTGGTGGAAG+TGG | - | chr4.2:74606662-74606681 | MS.gene77008:intron | 35.0% |
| ! | GATGGTTTTTGATAGAACAC+TGG | - | chr4.2:74607530-74607549 | MS.gene77008:intron | 35.0% |
| ! | GGCAAAAGGTATATGACATT+TGG | - | chr4.2:74605627-74605646 | MS.gene77008:intron | 35.0% |
| ! | GTTTCAGGTGGCAAAAATAA+CGG | - | chr4.2:74605565-74605584 | MS.gene77008:intron | 35.0% |
| ! | TCATTATGTTTTCAACGCAC+AGG | + | chr4.2:74608308-74608327 | None:intergenic | 35.0% |
| ! | TCTGCCATCTTTTCTACTAT+AGG | + | chr4.2:74607342-74607361 | None:intergenic | 35.0% |
| ! | TTAACTGATGTTAGCCTCTT+GGG | - | chr4.2:74608895-74608914 | MS.gene77008:CDS | 35.0% |
| !! | GACCTGTGAATTTTGTTGTA+AGG | - | chr4.2:74607397-74607416 | MS.gene77008:intron | 35.0% |
| !! | GTTGTATATTCTCTGGGATA+GGG | - | chr4.2:74607609-74607628 | MS.gene77008:intron | 35.0% |
| !! | TCTTCTAATGGCCTTATTGT+GGG | - | chr4.2:74607659-74607678 | MS.gene77008:CDS | 35.0% |
| !! | TGCATTGAATTAGTGCTGAT+TGG | - | chr4.2:74609081-74609100 | MS.gene77008:CDS | 35.0% |
| !! | TGCTATTGTTGTTTAGTGCT+GGG | - | chr4.2:74608585-74608604 | MS.gene77008:intron | 35.0% |
| !! | TGTTGTATATTCTCTGGGAT+AGG | - | chr4.2:74607608-74607627 | MS.gene77008:intron | 35.0% |
| !! | TTCTTCTAATGGCCTTATTG+TGG | - | chr4.2:74607658-74607677 | MS.gene77008:CDS | 35.0% |
| !! | TTGCTATTGTTGTTTAGTGC+TGG | - | chr4.2:74608584-74608603 | MS.gene77008:intron | 35.0% |
| !! | TTGTATATTCTCTGGGATAG+GGG | - | chr4.2:74607610-74607629 | MS.gene77008:intron | 35.0% |
| !!! | TATTAGTGCATTTTCAGGTC+AGG | + | chr4.2:74608773-74608792 | None:intergenic | 35.0% |
| AAAGAAGCTAAGGAATCAGC+GGG | - | chr4.2:74605164-74605183 | MS.gene77008:intron | 40.0% | |
| AAATGGCACCTGTTATCATG+TGG | - | chr4.2:74608057-74608076 | MS.gene77008:intron | 40.0% | |
| AAGCGCCAAAGTTGTCTAAA+AGG | - | chr4.2:74608684-74608703 | MS.gene77008:CDS | 40.0% | |
| ACAAAAGAGAAGGTGGTTGT+GGG | - | chr4.2:74605374-74605393 | MS.gene77008:intron | 40.0% | |
| ACCTGTTATCATGTGGCAAA+AGG | - | chr4.2:74608064-74608083 | MS.gene77008:intron | 40.0% | |
| AGGATAACTTTGGGTGTAGA+AGG | - | chr4.2:74608424-74608443 | MS.gene77008:intron | 40.0% | |
| ATGCCAATATAGGCCCATAT+AGG | - | chr4.2:74608387-74608406 | MS.gene77008:intron | 40.0% | |
| CAATCGGAACTCCAAATACT+GGG | + | chr4.2:74606010-74606029 | None:intergenic | 40.0% | |
| CACCGTGATGATCATATTCA+GGG | + | chr4.2:74607889-74607908 | None:intergenic | 40.0% | |
| CATACATATGGTTGGATGTG+TGG | - | chr4.2:74607262-74607281 | MS.gene77008:intron | 40.0% | |
| CATTGTTGACCTTGTTCAGA+TGG | - | chr4.2:74608013-74608032 | MS.gene77008:CDS | 40.0% | |
| CCTGTTATCATGTGGCAAAA+GGG | - | chr4.2:74608065-74608084 | MS.gene77008:intron | 40.0% | |
| CGATTGAGATTACTGTACAG+AGG | - | chr4.2:74606024-74606043 | MS.gene77008:intron | 40.0% | |
| CTCCCTGAATATGATCATCA+CGG | - | chr4.2:74607884-74607903 | MS.gene77008:intron | 40.0% | |
| GATCCTATATGGGCCTATAT+TGG | + | chr4.2:74608393-74608412 | None:intergenic | 40.0% | |
| GATGTGTGGTAAGACTAGAT+GGG | - | chr4.2:74607276-74607295 | MS.gene77008:intron | 40.0% | |
| GGTCAAGCTTAAAGAAGCTA+AGG | - | chr4.2:74605154-74605173 | MS.gene77008:intron | 40.0% | |
| GTAGTTCCGTTGATCTAACA+AGG | - | chr4.2:74605854-74605873 | MS.gene77008:intron | 40.0% | |
| GTTCAACTTCAGTAGGTGTA+TGG | + | chr4.2:74608721-74608740 | None:intergenic | 40.0% | |
| TCAATCGGAACTCCAAATAC+TGG | + | chr4.2:74606011-74606030 | None:intergenic | 40.0% | |
| TCTTAAGGTCAGCCAATGAT+GGG | + | chr4.2:74607930-74607949 | None:intergenic | 40.0% | |
| TCTTGGGATCTTCTTTCCAA+GGG | - | chr4.2:74608911-74608930 | MS.gene77008:CDS | 40.0% | |
| TGATCATATTCAGGGAGTGA+AGG | + | chr4.2:74607881-74607900 | None:intergenic | 40.0% | |
| TGGCAGAAAGTAGACTTAGT+TGG | - | chr4.2:74607355-74607374 | MS.gene77008:intron | 40.0% | |
| TGTAAGGAGAGTAGATCAGA+TGG | - | chr4.2:74607413-74607432 | MS.gene77008:intron | 40.0% | |
| TGTACAGCATGTCTTGTAGA+CGG | + | chr4.2:74605293-74605312 | None:intergenic | 40.0% | |
| TTCTGGATTCAAGCTCTGTT+TGG | + | chr4.2:74608144-74608163 | None:intergenic | 40.0% | |
| TTCTTAAGGTCAGCCAATGA+TGG | + | chr4.2:74607931-74607950 | None:intergenic | 40.0% | |
| TTGGGACGGTATTCAAAAGT+CGG | - | chr4.2:74605249-74605268 | MS.gene77008:intron | 40.0% | |
| TTTGTCAGGGACAAAAGAGA+AGG | - | chr4.2:74605364-74605383 | MS.gene77008:intron | 40.0% | |
| ! | AGAAGCTGGTTCAACTACTT+GGG | - | chr4.2:74608160-74608179 | MS.gene77008:intron | 40.0% |
| ! | AGTGGTTTCTTTTCTTCCTC+AGG | - | chr4.2:74605029-74605048 | MS.gene77008:CDS | 40.0% |
| !! | GATTTAGTGAAAGGTACCTG+AGG | + | chr4.2:74605048-74605067 | None:intergenic | 40.0% |
| !! | GTGGGATTGGGTTTTGTATA+TGG | - | chr4.2:74606681-74606700 | MS.gene77008:intron | 40.0% |
| AAATGTTTAGCCACACCCCT+TGG | + | chr4.2:74608930-74608949 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | - | chr4.2:74607416-74607435 | MS.gene77008:intron | 45.0% | |
| ACAAGAGCTGCTACATCAAC+TGG | + | chr4.2:74606427-74606446 | None:intergenic | 45.0% | |
| ACTAGCACGAAGCAAAAGTG+CGG | + | chr4.2:74606596-74606615 | None:intergenic | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | - | chr4.2:74607417-74607436 | MS.gene77008:intron | 45.0% | |
| AGGTGACACTGTTATTACGG+AGG | - | chr4.2:74608793-74608812 | MS.gene77008:intron | 45.0% | |
| AGTAATGTAGCTGAAGTGGC+GGG | - | chr4.2:74605221-74605240 | MS.gene77008:intron | 45.0% | |
| CAAAAGAGAAGGTGGTTGTG+GGG | - | chr4.2:74605375-74605394 | MS.gene77008:intron | 45.0% | |
| CAAGTAGTTGAACCAGCTTC+TGG | + | chr4.2:74608161-74608180 | None:intergenic | 45.0% | |
| CAGGGAGTTGCTAAAACTGA+CGG | - | chr4.2:74605730-74605749 | MS.gene77008:intron | 45.0% | |
| CATCTTGACCACCCAGTATT+TGG | - | chr4.2:74605996-74606015 | MS.gene77008:intron | 45.0% | |
| CCAAGGTTGAAGAGGTAATG+TGG | - | chr4.2:74605402-74605421 | MS.gene77008:intron | 45.0% | |
| CCACATTACCTCTTCAACCT+TGG | + | chr4.2:74605405-74605424 | None:intergenic | 45.0% | |
| CTCTTGGGATCTTCTTTCCA+AGG | - | chr4.2:74608910-74608929 | MS.gene77008:CDS | 45.0% | |
| CTTGGAAAGAAGATCCCAAG+AGG | + | chr4.2:74608912-74608931 | None:intergenic | 45.0% | |
| CTTGGGATCTTCTTTCCAAG+GGG | - | chr4.2:74608912-74608931 | MS.gene77008:CDS | 45.0% | |
| GACAAAAGAGAAGGTGGTTG+TGG | - | chr4.2:74605373-74605392 | MS.gene77008:intron | 45.0% | |
| GACGGTATTCAAAAGTCGGT+GGG | - | chr4.2:74605253-74605272 | MS.gene77008:intron | 45.0% | |
| GAGTAATGTAGCTGAAGTGG+CGG | - | chr4.2:74605220-74605239 | MS.gene77008:intron | 45.0% | |
| GCACAGTTGACTAGTATCTG+AGG | + | chr4.2:74606071-74606090 | None:intergenic | 45.0% | |
| GCACCGTGATGATCATATTC+AGG | + | chr4.2:74607890-74607909 | None:intergenic | 45.0% | |
| GGAGTCATATCACTAGTGGT+AGG | - | chr4.2:74607439-74607458 | MS.gene77008:intron | 45.0% | |
| GGATGTGTGGTAAGACTAGA+TGG | - | chr4.2:74607275-74607294 | MS.gene77008:intron | 45.0% | |
| GGATTCAAGCTCTGTTTGGA+AGG | + | chr4.2:74608140-74608159 | None:intergenic | 45.0% | |
| GTCTACAAGACATGCTGTAC+AGG | - | chr4.2:74605292-74605311 | MS.gene77008:intron | 45.0% | |
| TAAAGCTCCAATGTGGTCAG+TGG | + | chr4.2:74606478-74606497 | None:intergenic | 45.0% | |
| TCAACTGGATTTGAGCCTTC+TGG | + | chr4.2:74606412-74606431 | None:intergenic | 45.0% | |
| TCATTTCCAGACTGTCTCGT+TGG | + | chr4.2:74609270-74609289 | None:intergenic | 45.0% | |
| TGGGAAACAGTGCTAAAACG+AGG | + | chr4.2:74607826-74607845 | None:intergenic | 45.0% | |
| TTGGTTGCCCTATACAACCA+AGG | - | chr4.2:74606283-74606302 | MS.gene77008:intron | 45.0% | |
| ! | ACCTTGTTCAGATGGACTCT+CGG | - | chr4.2:74608021-74608040 | MS.gene77008:CDS | 45.0% |
| ! | CAGAAGCTGGTTCAACTACT+TGG | - | chr4.2:74608159-74608178 | MS.gene77008:intron | 45.0% |
| ! | CCCTTTTGCCACATGATAAC+AGG | + | chr4.2:74608068-74608087 | None:intergenic | 45.0% |
| ! | TGTTTGGTGGAAGTGGGATT+GGG | - | chr4.2:74606669-74606688 | MS.gene77008:intron | 45.0% |
| ! | TTGTTTGGTGGAAGTGGGAT+TGG | - | chr4.2:74606668-74606687 | MS.gene77008:intron | 45.0% |
| !!! | TTTTTACTTTAATTAAAAAT+TGG | - | chr4.2:74605940-74605959 | MS.gene77008:intron | 5.0% |
| ACGCCTTATCCCACTAAGTG+GGG | + | chr4.2:74607579-74607598 | None:intergenic | 50.0% | |
| ACTACTTGGGACATGCTTGC+TGG | - | chr4.2:74608173-74608192 | MS.gene77008:CDS | 50.0% | |
| ACTGGCATGCCTTCATCCAA+AGG | + | chr4.2:74609182-74609201 | None:intergenic | 50.0% | |
| ATATCAGCTGCTGCTACGAC+TGG | - | chr4.2:74605323-74605342 | MS.gene77008:intron | 50.0% | |
| CACGCCTTATCCCACTAAGT+GGG | + | chr4.2:74607580-74607599 | None:intergenic | 50.0% | |
| CACTGAGGTGAGATTACCGA+AGG | + | chr4.2:74604996-74605015 | None:intergenic | 50.0% | |
| CAGAGCTTGAATCCAGAAGC+TGG | - | chr4.2:74608146-74608165 | MS.gene77008:intron | 50.0% | |
| CTCACCTCAGTGGCAAGATA+AGG | - | chr4.2:74605004-74605023 | MS.gene77008:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4.2:74607575-74607594 | None:intergenic | 50.0% | |
| CTTCGGTAATCTCACCTCAG+TGG | - | chr4.2:74604994-74605013 | MS.gene77008:CDS | 50.0% | |
| GAATCAGCGGGAACGTTTGT+TGG | - | chr4.2:74605176-74605195 | MS.gene77008:intron | 50.0% | |
| GAGGGGAGTCATATCACTAG+TGG | - | chr4.2:74607435-74607454 | MS.gene77008:intron | 50.0% | |
| GATCTTCTTTCCAAGGGGTG+TGG | - | chr4.2:74608917-74608936 | MS.gene77008:CDS | 50.0% | |
| GGACGGTATTCAAAAGTCGG+TGG | - | chr4.2:74605252-74605271 | MS.gene77008:intron | 50.0% | |
| GGAGAGTAGATCAGATGGAG+GGG | - | chr4.2:74607418-74607437 | MS.gene77008:intron | 50.0% | |
| GGGGAAATCCAAGGTTGAAG+AGG | - | chr4.2:74605394-74605413 | MS.gene77008:intron | 50.0% | |
| GTCAGGGACAAAAGAGAAGG+TGG | - | chr4.2:74605367-74605386 | MS.gene77008:intron | 50.0% | |
| TCCGAGAGTCCATCTGAACA+AGG | + | chr4.2:74608025-74608044 | None:intergenic | 50.0% | |
| TCCTGAGGAGAGGTTTGTCA+GGG | - | chr4.2:74605351-74605370 | MS.gene77008:intron | 50.0% | |
| TCGATTGCACCGAAGTCAAC+TGG | + | chr4.2:74609200-74609219 | None:intergenic | 50.0% | |
| TCGGAACTCCAAATACTGGG+TGG | + | chr4.2:74606007-74606026 | None:intergenic | 50.0% | |
| TCGGAGCCTTGCAATGGAAA+TGG | - | chr4.2:74608040-74608059 | MS.gene77008:intron | 50.0% | |
| TTCCTGAGGAGAGGTTTGTC+AGG | - | chr4.2:74605350-74605369 | MS.gene77008:intron | 50.0% | |
| ! | CTGAAGTGGCGGGAAAAGTT+GGG | - | chr4.2:74605231-74605250 | MS.gene77008:intron | 50.0% |
| ! | GAAGGCATGCCAGTTGACTT+CGG | - | chr4.2:74609188-74609207 | MS.gene77008:intron | 50.0% |
| ! | GTTTGTTGGCGAGGTCACAA+AGG | - | chr4.2:74605190-74605209 | MS.gene77008:intron | 50.0% |
| !! | CAGGTGCCATTTCCATTGCA+AGG | + | chr4.2:74608049-74608068 | None:intergenic | 50.0% |
| ACTGGTGCATTCCTGAGGAG+AGG | - | chr4.2:74605341-74605360 | MS.gene77008:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4.2:74607566-74607585 | MS.gene77008:intron | 55.0% | |
| ATGTGGTCAGTGGCTCAGGA+AGG | + | chr4.2:74606468-74606487 | None:intergenic | 55.0% | |
| CAGATGCCAACGAGACAGTC+TGG | - | chr4.2:74609261-74609280 | MS.gene77008:CDS | 55.0% | |
| CAGTGGCAAGATAAGGCGAG+TGG | - | chr4.2:74605011-74605030 | MS.gene77008:CDS | 55.0% | |
| CCACGCCTTATCCCACTAAG+TGG | + | chr4.2:74607581-74607600 | None:intergenic | 55.0% | |
| CCACTTAGTGGGATAAGGCG+TGG | - | chr4.2:74607578-74607597 | MS.gene77008:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4.2:74607573-74607592 | MS.gene77008:intron | 55.0% | |
| CTACGACTGGTGCATTCCTG+AGG | - | chr4.2:74605336-74605355 | MS.gene77008:intron | 55.0% | |
| CTCGCCTTATCTTGCCACTG+AGG | + | chr4.2:74605011-74605030 | None:intergenic | 55.0% | |
| GGTGGTTGTGGGGAAATCCA+AGG | - | chr4.2:74605385-74605404 | MS.gene77008:intron | 55.0% | |
| TCAACTGCTGCAGTGCCAGA+AGG | - | chr4.2:74606394-74606413 | MS.gene77008:intron | 55.0% | |
| TCCAATGTGGTCAGTGGCTC+AGG | + | chr4.2:74606472-74606491 | None:intergenic | 55.0% | |
| TCCCTGACAAACCTCTCCTC+AGG | + | chr4.2:74605355-74605374 | None:intergenic | 55.0% | |
| TCCTGAGCCACTGACCACAT+TGG | - | chr4.2:74606468-74606487 | MS.gene77008:intron | 55.0% | |
| TGCAGACGAGAGTGAAGCCA+TGG | - | chr4.2:74609139-74609158 | MS.gene77008:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4.2:74607567-74607586 | MS.gene77008:intron | 55.0% | |
| ! | AGTGGCGGGAAAAGTTGGGA+CGG | - | chr4.2:74605235-74605254 | MS.gene77008:intron | 55.0% |
| ! | GCTGAAGTGGCGGGAAAAGT+TGG | - | chr4.2:74605230-74605249 | MS.gene77008:intron | 55.0% |
| AAGTCGGTGGGCACGTCTTC+AGG | - | chr4.2:74605265-74605284 | MS.gene77008:intron | 60.0% | |
| GGACTCTCGGAGCCTTGCAA+TGG | - | chr4.2:74608034-74608053 | MS.gene77008:intron | 60.0% | |
| ! | AGCGGGAACGTTTGTTGGCG+AGG | - | chr4.2:74605181-74605200 | MS.gene77008:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 74604990 | 74609289 | 74604990 | ID=MS.gene77008 |
| chr4.2 | mRNA | 74604990 | 74609289 | 74604990 | ID=MS.gene77008.t1;Parent=MS.gene77008 |
| chr4.2 | exon | 74609229 | 74609289 | 74609229 | ID=MS.gene77008.t1.exon1;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74609229 | 74609289 | 74609229 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74608864 | 74609126 | 74608864 | ID=MS.gene77008.t1.exon2;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74608864 | 74609126 | 74608864 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74608645 | 74608707 | 74608645 | ID=MS.gene77008.t1.exon3;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74608645 | 74608707 | 74608645 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74608528 | 74608546 | 74608528 | ID=MS.gene77008.t1.exon4;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74608528 | 74608546 | 74608528 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74608169 | 74608267 | 74608169 | ID=MS.gene77008.t1.exon5;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74608169 | 74608267 | 74608169 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74607975 | 74608052 | 74607975 | ID=MS.gene77008.t1.exon6;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74607975 | 74608052 | 74607975 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74607643 | 74607887 | 74607643 | ID=MS.gene77008.t1.exon7;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74607643 | 74607887 | 74607643 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74606085 | 74606247 | 74606085 | ID=MS.gene77008.t1.exon8;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74606085 | 74606247 | 74606085 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| chr4.2 | exon | 74604990 | 74605135 | 74604990 | ID=MS.gene77008.t1.exon9;Parent=MS.gene77008.t1 |
| chr4.2 | CDS | 74604990 | 74605135 | 74604990 | ID=cds.MS.gene77008.t1;Parent=MS.gene77008.t1 |
| Gene Sequence |
| Protein sequence |
