AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059965


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059965.t1 MTR_4g104380 98.638 514 7 0 1 514 1 514 0.0 1040
MS.gene059965.t1 MTR_3g075400 74.409 508 130 0 7 514 2 509 0.0 785
MS.gene059965.t1 MTR_4g007500 78.894 398 31 4 30 427 20 364 0.0 611
MS.gene059965.t1 MTR_6g027280 52.353 170 35 5 48 199 95 236 5.55e-36 134
MS.gene059965.t1 MTR_8g092620 27.397 292 200 6 226 513 14 297 2.09e-31 123
MS.gene059965.t1 MTR_4g119620 29.804 255 167 6 228 475 76 325 1.44e-29 119
MS.gene059965.t1 MTR_4g119620 26.792 265 175 7 263 513 18 277 4.50e-19 88.6
MS.gene059965.t1 MTR_8g092620 28.571 273 183 6 226 494 21 285 2.11e-29 118
MS.gene059965.t1 MTR_7g086360 27.206 272 193 2 226 492 51 322 1.24e-27 114
MS.gene059965.t1 MTR_7g086360 27.143 210 138 6 310 513 51 251 6.30e-15 76.6
MS.gene059965.t1 MTR_4g102520 25.962 312 206 8 218 513 282 584 3.31e-24 106
MS.gene059965.t1 MTR_4g102520 33.019 106 65 3 289 392 273 374 7.67e-12 68.2
MS.gene059965.t1 MTR_8g106790 26.948 308 176 9 241 513 27 320 2.56e-22 98.2
MS.gene059965.t1 MTR_8g106790 25.818 275 172 8 225 475 58 324 7.80e-17 82.0
MS.gene059965.t1 MTR_8g106790 27.027 222 140 7 306 513 7 220 1.87e-13 72.0
MS.gene059965.t1 MTR_1g072140 26.073 303 214 6 219 513 12 312 3.80e-22 97.4
MS.gene059965.t1 MTR_8g092620 28.837 215 143 5 226 436 14 222 6.03e-22 95.1
MS.gene059965.t1 MTR_2g012630 26.906 223 157 3 245 466 31 248 1.94e-20 95.9
MS.gene059965.t1 MTR_2g012630 26.974 152 109 2 228 378 98 248 3.40e-15 79.3
MS.gene059965.t1 MTR_2g012630 23.684 228 164 4 285 509 29 249 1.77e-14 77.0
MS.gene059965.t1 MTR_2g012630 26.906 223 157 3 245 466 31 248 2.02e-20 95.9
MS.gene059965.t1 MTR_2g012630 26.974 152 109 2 228 378 98 248 3.03e-15 79.3
MS.gene059965.t1 MTR_2g012630 23.684 228 164 4 285 509 29 249 1.97e-14 76.6
MS.gene059965.t1 MTR_6g004040 27.049 244 168 5 224 462 7 245 2.13e-20 95.5
MS.gene059965.t1 MTR_6g004040 24.887 221 156 4 284 501 29 242 4.40e-16 82.0
MS.gene059965.t1 MTR_6g004040 24.103 195 146 2 221 414 50 243 1.39e-12 70.9
MS.gene059965.t1 MTR_6g004040 21.154 208 153 4 310 513 12 212 2.78e-11 66.6
MS.gene059965.t1 MTR_1g072740 27.444 266 167 8 218 468 281 535 4.75e-18 87.8
MS.gene059965.t1 MTR_1g072740 33.019 106 65 3 289 392 272 373 5.64e-12 68.6
MS.gene059965.t1 MTR_4g105700 26.394 269 175 8 263 514 350 612 1.50e-17 86.7
MS.gene059965.t1 MTR_4g105700 31.351 185 116 5 253 427 41 224 2.96e-16 82.4
MS.gene059965.t1 MTR_8g104010 25.322 233 163 4 283 513 600 823 5.66e-17 84.7
MS.gene059965.t1 MTR_8g104010 26.119 268 163 13 226 471 669 923 5.95e-13 72.0
MS.gene059965.t1 MTR_8g104010 25.322 233 163 4 283 513 517 740 6.03e-17 84.7
MS.gene059965.t1 MTR_8g104010 26.119 268 163 13 226 471 586 840 5.36e-13 72.0
MS.gene059965.t1 MTR_8g104010 25.322 233 163 4 283 513 880 1103 9.40e-17 84.3
MS.gene059965.t1 MTR_8g104010 26.119 268 163 13 226 471 949 1203 6.30e-13 72.0
MS.gene059965.t1 MTR_1g097140 24.912 285 199 7 225 504 118 392 9.76e-17 82.8
MS.gene059965.t1 MTR_1g097140 24.306 288 155 8 224 498 74 311 5.83e-11 64.7
MS.gene059965.t1 MTR_2g436510 22.222 261 185 7 224 477 163 412 3.78e-16 81.3
MS.gene059965.t1 MTR_3g045130 22.892 249 180 3 267 514 274 511 4.23e-16 81.3
MS.gene059965.t1 MTR_3g045130 23.320 253 184 5 232 482 277 521 4.49e-12 68.9
MS.gene059965.t1 MTR_8g038550 22.635 296 181 5 221 514 216 465 1.80e-15 79.7
MS.gene059965.t1 MTR_3g106080 27.815 302 188 11 218 513 337 614 5.43e-15 78.2
MS.gene059965.t1 MTR_3g106080 21.951 205 158 2 226 429 415 618 1.21e-11 67.8
MS.gene059965.t1 MTR_1g054300 27.660 141 101 1 202 342 342 481 1.33e-14 76.6
MS.gene059965.t1 MTR_1g054300 25.630 238 146 7 245 471 264 481 1.52e-11 67.0
MS.gene059965.t1 MTR_4g095058 23.000 300 172 6 223 512 321 571 2.25e-14 76.3
MS.gene059965.t1 MTR_4g095058 23.000 300 172 6 223 512 323 573 2.40e-14 75.9
MS.gene059965.t1 MTR_2g019400 27.011 174 114 3 316 489 2 162 9.45e-14 72.0
MS.gene059965.t1 MTR_3g449990 24.522 314 209 11 215 513 255 555 1.10e-13 73.9
MS.gene059965.t1 MTR_5g016350 23.381 278 195 6 245 512 245 514 3.58e-13 72.0
MS.gene059965.t1 MTR_5g016350 23.381 278 195 6 245 512 309 578 4.75e-13 72.0
MS.gene059965.t1 MTR_5g016370 24.172 302 166 7 223 512 340 590 1.03e-12 70.9
MS.gene059965.t1 MTR_2g016690 23.693 287 193 8 245 514 23 300 1.92e-12 68.9
MS.gene059965.t1 MTR_1g034785 23.113 212 141 3 240 429 86 297 2.57e-12 69.3
MS.gene059965.t1 MTR_4g125710 24.812 266 169 8 245 489 33 288 7.91e-12 67.0
MS.gene059965.t1 MTR_3g052220 22.422 223 144 7 280 482 222 435 8.54e-12 67.8
MS.gene059965.t1 MTR_3g052220 27.108 166 107 4 328 483 227 388 1.18e-11 67.4
MS.gene059965.t1 MTR_7g076230 25.243 206 146 4 281 483 378 578 1.13e-11 67.8
MS.gene059965.t1 MTR_6g005220 23.741 278 172 11 274 513 110 385 1.22e-11 67.4
MS.gene059965.t1 MTR_2g029940 23.377 231 162 5 245 473 225 442 1.45e-11 67.0
MS.gene059965.t1 MTR_2g034500 24.188 277 161 9 225 471 236 493 1.59e-11 67.8
MS.gene059965.t1 MTR_4g071130 26.394 269 166 12 225 485 46 290 2.79e-11 67.0
MS.gene059965.t1 MTR_1g044720 25.000 204 147 4 232 431 224 425 4.74e-11 65.5
MS.gene059965.t1 MTR_1g069345 24.127 315 207 14 217 513 203 503 7.65e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059965.t1 AT5G50230 71.203 507 146 0 8 514 3 509 0.0 784
MS.gene059965.t1 AT5G64730 26.490 302 216 4 213 513 1 297 4.69e-30 119
MS.gene059965.t1 AT3G49660 28.682 258 168 5 226 475 67 316 1.37e-29 119
MS.gene059965.t1 AT3G49660 25.581 301 205 6 226 514 20 313 1.37e-27 113
MS.gene059965.t1 AT2G43770 26.838 272 194 2 226 492 49 320 2.00e-28 116
MS.gene059965.t1 AT2G43770 26.923 208 141 5 310 513 49 249 4.66e-15 77.0
MS.gene059965.t1 AT1G48630 26.403 303 185 8 241 513 27 321 2.64e-22 98.2
MS.gene059965.t1 AT1G48630 26.087 276 171 8 225 475 58 325 1.48e-17 84.3
MS.gene059965.t1 AT1G48630 25.455 220 146 7 306 513 7 220 1.43e-12 69.3
MS.gene059965.t1 AT3G18130 26.733 303 184 8 241 513 27 321 3.08e-22 98.2
MS.gene059965.t1 AT3G18130 26.087 276 171 8 225 475 58 325 1.67e-17 84.0
MS.gene059965.t1 AT3G18130 25.000 220 147 7 306 513 7 220 1.11e-11 66.6
MS.gene059965.t1 AT1G10580 24.038 312 212 8 218 513 270 572 3.46e-21 97.4
MS.gene059965.t1 AT3G16650 25.191 262 175 8 224 477 163 411 7.56e-21 95.9
MS.gene059965.t1 AT5G23430 28.111 217 150 4 224 435 7 222 1.16e-20 96.3
MS.gene059965.t1 AT5G23430 25.229 218 153 4 285 499 30 240 1.80e-15 80.1
MS.gene059965.t1 AT5G23430 24.103 195 146 2 221 414 50 243 9.76e-12 68.2
MS.gene059965.t1 AT5G23430 28.111 217 150 4 224 435 7 222 1.16e-20 96.3
MS.gene059965.t1 AT5G23430 25.229 218 153 4 285 499 30 240 1.80e-15 80.1
MS.gene059965.t1 AT5G23430 24.103 195 146 2 221 414 50 243 9.76e-12 68.2
MS.gene059965.t1 AT5G23430 28.111 217 150 4 224 435 7 222 1.21e-20 96.3
MS.gene059965.t1 AT5G23430 25.229 218 153 4 285 499 30 240 1.85e-15 80.1
MS.gene059965.t1 AT5G23430 24.103 195 146 2 221 414 50 243 1.01e-11 68.2
MS.gene059965.t1 AT1G11160 27.165 254 174 6 224 471 6 254 1.25e-20 96.3
MS.gene059965.t1 AT1G11160 23.348 227 168 3 284 509 28 249 6.98e-13 72.0
MS.gene059965.t1 AT1G11160 27.165 254 174 6 224 471 6 254 1.33e-20 96.3
MS.gene059965.t1 AT1G11160 23.348 227 168 3 284 509 28 249 7.36e-13 72.0
MS.gene059965.t1 AT1G18080 25.484 310 180 9 241 513 27 322 1.66e-20 93.2
MS.gene059965.t1 AT1G18080 28.440 218 143 6 306 513 7 221 5.08e-15 76.6
MS.gene059965.t1 AT1G18080 23.827 277 177 8 225 475 58 326 2.42e-14 74.7
MS.gene059965.t1 AT1G11160 27.165 254 174 6 224 471 6 254 1.76e-20 95.9
MS.gene059965.t1 AT1G11160 23.348 227 168 3 284 509 28 249 9.48e-13 71.6
MS.gene059965.t1 AT5G08390 28.571 217 149 4 224 435 7 222 2.82e-20 95.1
MS.gene059965.t1 AT5G08390 24.074 216 158 3 285 499 30 240 6.66e-15 78.2
MS.gene059965.t1 AT5G08390 22.564 195 149 2 221 414 50 243 4.66e-11 65.9
MS.gene059965.t1 AT5G08390 25.974 154 104 3 226 374 97 245 6.89e-11 65.5
MS.gene059965.t1 AT4G15900 23.970 267 173 9 224 477 169 418 3.12e-19 90.9
MS.gene059965.t1 AT4G02730 25.704 284 202 6 214 490 23 304 3.57e-19 89.4
MS.gene059965.t1 AT4G02730 21.654 254 186 7 267 513 38 285 1.76e-13 72.0
MS.gene059965.t1 AT1G04510 26.509 381 234 13 58 431 87 428 1.56e-18 89.0
MS.gene059965.t1 AT1G04510 26.509 381 234 13 58 431 87 428 1.56e-18 89.0
MS.gene059965.t1 AT1G61210 26.378 254 176 6 224 472 6 253 5.29e-18 88.2
MS.gene059965.t1 AT1G61210 24.324 222 156 5 284 501 28 241 1.41e-12 70.9
MS.gene059965.t1 AT5G13480 23.469 294 179 4 221 513 167 415 6.06e-18 87.4
MS.gene059965.t1 AT5G13480 23.469 294 179 4 221 513 144 392 6.30e-18 87.4
MS.gene059965.t1 AT5G13480 23.469 294 179 4 221 513 144 392 8.87e-18 87.0
MS.gene059965.t1 AT1G61210 26.872 227 160 4 224 445 6 231 9.14e-18 87.4
MS.gene059965.t1 AT1G61210 24.324 222 156 5 284 501 28 241 2.60e-12 70.1
MS.gene059965.t1 AT1G61210 25.157 159 116 3 226 383 96 252 1.03e-11 68.2
MS.gene059965.t1 AT5G13480 23.469 294 179 4 221 513 156 404 9.70e-18 87.0
MS.gene059965.t1 AT1G61210 26.872 227 160 4 224 445 6 231 9.90e-18 87.4
MS.gene059965.t1 AT1G61210 24.324 222 156 5 284 501 28 241 2.67e-12 70.1
MS.gene059965.t1 AT1G61210 25.157 159 116 3 226 383 96 252 1.16e-11 68.2
MS.gene059965.t1 AT5G52820 22.849 337 214 11 219 513 97 429 1.89e-17 85.5
MS.gene059965.t1 AT5G52820 26.816 179 111 3 164 342 313 471 1.87e-14 76.3
MS.gene059965.t1 AT2G33340 23.758 463 294 16 58 507 87 503 2.32e-16 82.4
MS.gene059965.t1 AT2G33340 23.758 463 294 16 58 507 87 503 2.32e-16 82.4
MS.gene059965.t1 AT2G33340 24.011 379 243 11 58 430 87 426 4.25e-16 81.3
MS.gene059965.t1 AT5G16750 26.038 265 177 6 264 513 350 610 4.52e-16 82.0
MS.gene059965.t1 AT5G16750 26.512 215 149 5 254 461 42 254 4.55e-15 79.0
MS.gene059965.t1 AT5G16750 23.443 273 175 8 221 471 392 652 2.35e-11 67.0
MS.gene059965.t1 AT3G27640 24.911 281 169 8 274 513 130 409 1.34e-15 80.1
MS.gene059965.t1 AT3G27640 24.911 281 169 8 274 513 111 390 1.42e-15 79.7
MS.gene059965.t1 AT5G43920 25.806 310 208 11 218 513 212 513 2.10e-15 79.3
MS.gene059965.t1 AT1G11160 26.087 207 146 4 267 471 11 212 3.02e-15 79.3
MS.gene059965.t1 AT1G11160 28.387 155 107 3 226 378 54 206 3.89e-14 75.9
MS.gene059965.t1 AT1G11160 25.123 203 146 3 308 509 10 207 1.85e-12 70.5
MS.gene059965.t1 AT1G49040 26.937 271 171 12 241 498 866 1122 3.14e-15 79.3
MS.gene059965.t1 AT1G49040 24.481 241 155 7 283 513 866 1089 6.07e-14 75.5
MS.gene059965.t1 AT1G49040 24.862 181 125 6 233 409 944 1117 1.37e-12 71.2
MS.gene059965.t1 AT3G18140 24.373 279 197 7 245 514 8 281 1.00e-14 75.5
MS.gene059965.t1 AT3G18140 25.000 184 122 5 235 406 124 303 7.85e-11 63.5
MS.gene059965.t1 AT5G67320 23.264 288 162 5 226 503 361 599 1.19e-14 77.0
MS.gene059965.t1 AT4G03020 26.104 249 164 6 275 513 232 470 1.46e-14 76.6
MS.gene059965.t1 AT4G03020 26.104 249 164 6 275 513 232 470 1.46e-14 76.6
MS.gene059965.t1 AT4G03020 26.104 249 164 6 275 513 232 470 1.46e-14 76.6
MS.gene059965.t1 AT3G49180 24.645 211 142 3 243 436 91 301 7.22e-14 73.9
MS.gene059965.t1 AT5G08560 23.944 284 164 10 278 513 280 559 1.01e-13 74.3
MS.gene059965.t1 AT5G08560 23.944 284 164 10 278 513 280 559 1.01e-13 74.3
MS.gene059965.t1 AT5G08560 23.944 284 164 10 278 513 280 559 1.01e-13 74.3
MS.gene059965.t1 AT5G25150 26.367 311 177 11 218 513 340 613 1.59e-13 73.6
MS.gene059965.t1 AT5G25150 22.439 205 157 2 226 429 414 617 6.10e-11 65.5
MS.gene059965.t1 AT5G25150 26.367 311 177 11 218 513 340 613 1.61e-13 73.6
MS.gene059965.t1 AT5G25150 22.439 205 157 2 226 429 414 617 6.57e-11 65.5
MS.gene059965.t1 AT2G47410 28.249 177 109 3 225 383 49 225 1.93e-13 73.9
MS.gene059965.t1 AT2G47410 28.249 177 109 3 225 383 231 407 1.96e-13 73.9
MS.gene059965.t1 AT2G47410 28.249 177 109 3 225 383 230 406 2.10e-13 73.9
MS.gene059965.t1 AT2G21390 24.000 275 172 7 225 468 46 314 7.86e-13 72.0
MS.gene059965.t1 AT2G47410 26.768 198 127 3 225 420 49 230 1.09e-12 71.6
MS.gene059965.t1 AT2G47410 26.768 198 127 3 225 420 49 230 1.09e-12 71.6
MS.gene059965.t1 AT2G16405 23.308 266 182 7 268 513 212 475 1.17e-12 70.5
MS.gene059965.t1 AT2G41500 23.140 242 174 6 277 514 303 536 1.25e-12 70.5
MS.gene059965.t1 AT2G41500 23.320 253 182 6 226 474 294 538 1.73e-12 70.1
MS.gene059965.t1 AT2G41500 23.140 242 174 6 277 514 303 536 1.25e-12 70.5
MS.gene059965.t1 AT2G41500 23.320 253 182 6 226 474 294 538 1.73e-12 70.1
MS.gene059965.t1 AT2G47410 26.768 198 127 3 225 420 231 412 1.26e-12 71.2
MS.gene059965.t1 AT4G29830 23.810 294 195 7 227 498 11 297 1.32e-12 69.3
MS.gene059965.t1 AT2G22040 23.693 287 191 9 245 514 13 288 1.75e-12 68.9
MS.gene059965.t1 AT2G22040 25.134 187 125 4 235 409 130 313 1.90e-12 68.6
MS.gene059965.t1 AT1G71840 23.841 302 208 10 224 513 64 355 2.68e-12 68.9
MS.gene059965.t1 AT3G15610 23.810 273 195 7 245 513 34 297 3.81e-12 68.2
MS.gene059965.t1 AT1G73720 24.848 165 111 3 328 483 226 386 7.74e-12 68.2
MS.gene059965.t1 AT1G73720 22.791 215 152 6 280 482 221 433 1.59e-11 67.0
MS.gene059965.t1 AT5G49430 26.570 207 128 4 225 429 240 424 3.68e-11 66.6
MS.gene059965.t1 AT5G49430 26.570 207 128 4 225 429 240 424 3.68e-11 66.6
MS.gene059965.t1 AT1G62020 22.909 275 175 7 225 468 46 314 4.56e-11 66.2
MS.gene059965.t1 AT2G26490 26.820 261 157 13 244 491 146 385 7.01e-11 64.7
MS.gene059965.t1 AT1G52730 22.993 274 196 8 245 513 34 297 8.57e-11 63.9
MS.gene059965.t1 AT1G52730 22.993 274 196 8 245 513 34 297 8.57e-11 63.9
MS.gene059965.t1 AT5G14530 22.727 308 206 10 200 495 8 295 8.71e-11 63.9

Find 105 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAACAGAGTGGCTTCTAAT+TGG 0.280252 8.1:+20064234 MS.gene059965:CDS
TCCTTAAGTTCAAGTCTTAC+TGG 0.289367 8.1:+20063702 MS.gene059965:CDS
GATTGTATTATACCTCATTT+AGG 0.316444 8.1:-20062592 None:intergenic
ACGACCGTACTATAAAAGTT+TGG 0.316749 8.1:+20063919 MS.gene059965:CDS
CGAGTCCGTCATACCCTTAC+TGG 0.338442 8.1:+20063828 MS.gene059965:CDS
CTCTCAATTAAAGACAGATT+TGG 0.339284 8.1:+20062415 MS.gene059965:CDS
TCAATCGCAACTTGTTCTTT+CGG 0.343457 8.1:-20061325 None:intergenic
TTGTTTCAATCTGGTCATAA+TGG 0.359886 8.1:+20064441 MS.gene059965:CDS
CTTCTGTTCTCTGTTGTAGC+TGG 0.366870 8.1:+20064375 MS.gene059965:CDS
GCAAAGAGCATTGCAGTTGC+TGG 0.371762 8.1:-20063982 None:intergenic
TCAATATCCCTTTCTCGAAA+TGG 0.373411 8.1:+20064122 MS.gene059965:CDS
ACAACAACAATGGTGAAAAC+TGG 0.379287 8.1:+20061298 None:intergenic
TCGATGGTAATCTTCGGTTA+TGG 0.380769 8.1:+20064042 MS.gene059965:CDS
TTCAGAACTAAAAGCACAAC+TGG 0.383721 8.1:+20062478 MS.gene059965:CDS
ATCGACATGTCCAGAAAATA+TGG 0.387589 8.1:-20064024 None:intergenic
CGACCGTACTATAAAAGTTT+GGG 0.390463 8.1:+20063920 MS.gene059965:CDS
TGGCTGCCTTGGCTCAGTAT+TGG 0.392787 8.1:+20063722 MS.gene059965:CDS
AATTCTAGTAGATTGATTAC+TGG 0.396540 8.1:+20063636 MS.gene059965:CDS
GAAAGAGAAAGCAGAGAACT+TGG 0.396574 8.1:+20061935 MS.gene059965:CDS
TCAAGTCTTACTGGCTGCCT+TGG 0.397402 8.1:+20063711 MS.gene059965:CDS
TTCTAGACCCATCGTTTCTC+AGG 0.404660 8.1:+20061429 MS.gene059965:CDS
AGAATTGTACTCGAACAATA+AGG 0.407571 8.1:-20063619 None:intergenic
CAATATTTCCATTTCGAGAA+AGG 0.408563 8.1:-20064130 None:intergenic
CTGATGGATCTGTGCATATA+TGG 0.411583 8.1:+20064306 MS.gene059965:CDS
GGAATGGAATTGTTTCAATC+TGG 0.416661 8.1:+20064432 MS.gene059965:CDS
CGATGGTAATCTTCGGTTAT+GGG 0.416788 8.1:+20064043 MS.gene059965:CDS
AAGACATGGTTCAGCGGCTA+AGG 0.439770 8.1:+20063454 MS.gene059965:CDS
ATTCCTGTCAGCTGAAGCTA+GGG 0.443091 8.1:-20064414 None:intergenic
AATATTTCCATTTCGAGAAA+GGG 0.445723 8.1:-20064129 None:intergenic
CTTTATCCGTGTGTCCAGTA+AGG 0.447371 8.1:-20063842 None:intergenic
TTTGTTTGATGTGCGATCTC+TGG 0.451133 8.1:+20064184 MS.gene059965:CDS
GCCAGTAAGACTTGAACTTA+AGG 0.454568 8.1:-20063703 None:intergenic
TCCCTTCCAATTGCAAATAC+AGG 0.460830 8.1:+20063568 MS.gene059965:CDS
CATTCCTGTCAGCTGAAGCT+AGG 0.467857 8.1:-20064415 None:intergenic
AATAACAGATCGATTATCAT+TGG 0.473031 8.1:-20063757 None:intergenic
GCTCTTTGCTTCAGCACAGA+TGG 0.474209 8.1:+20063996 MS.gene059965:CDS
CTAGAAAGTGCGAGAAAAGC+AGG 0.474966 8.1:-20061412 None:intergenic
GACAACAATCATGTTGCCGC+TGG 0.477287 8.1:+20064278 MS.gene059965:CDS
ATTTAGCCTGTATTTGCAAT+TGG 0.481713 8.1:-20063574 None:intergenic
GAAAGCAGAGAACTTGGAAG+TGG 0.488324 8.1:+20061941 MS.gene059965:CDS
AACCCCTAGCTTCAGCTGAC+AGG 0.489230 8.1:+20064411 MS.gene059965:CDS
ATTCTAGTAGATTGATTACT+GGG 0.491572 8.1:+20063637 MS.gene059965:CDS
GCGGCAACATGATTGTTGTC+TGG 0.492362 8.1:-20064275 None:intergenic
TGTTGTAGCTGGAGTGGAAT+GGG 0.499332 8.1:+20064386 MS.gene059965:CDS
AGCCTGTATTTGCAATTGGA+AGG 0.502314 8.1:-20063570 None:intergenic
AAACGCCATCTTCTCGAAGA+AGG 0.507490 8.1:+20061379 MS.gene059965:CDS
GCCTGTATTTGCAATTGGAA+GGG 0.520159 8.1:-20063569 None:intergenic
CATATATGGTCAATATCTAA+AGG 0.520412 8.1:+20064320 MS.gene059965:CDS
GAGCGCCTTCTTCGAGAAGA+TGG 0.521377 8.1:-20061384 None:intergenic
GACATGTCGATGGTAATCTT+CGG 0.525301 8.1:+20064036 MS.gene059965:CDS
AAAGTTTGGGACTTGATGAA+AGG 0.527945 8.1:+20063933 MS.gene059965:CDS
TACTTCCACAACAAGTTGCT+CGG 0.529307 8.1:-20062000 None:intergenic
CAAAGAGCATTGCAGTTGCT+GGG 0.531625 8.1:-20063981 None:intergenic
GTTGCCGCTGGGTCTACTGA+TGG 0.534764 8.1:+20064290 MS.gene059965:CDS
GTGCAAATTATCCCTTCCAC+TGG 0.536187 8.1:-20064159 None:intergenic
GTTCTCTGTTGTAGCTGGAG+TGG 0.537003 8.1:+20064380 MS.gene059965:CDS
AAAGTGTGGGATACAAATAC+AGG 0.539323 8.1:+20063678 MS.gene059965:CDS
ATTGTTCGTCGAAGTGAAGA+AGG 0.542555 8.1:+20063519 MS.gene059965:CDS
TATGTGTGGGATCTTAGCTC+AGG 0.543218 8.1:+20063804 MS.gene059965:CDS
CTAGCTTCAGCTGACAGGAA+TGG 0.547140 8.1:+20064416 MS.gene059965:CDS
AGAAGGAGTTGACAGAATTG+AGG 0.554456 8.1:+20062084 MS.gene059965:CDS
GTGCGATCTCTGGAAGTTTG+TGG 0.559305 8.1:+20064194 MS.gene059965:CDS
TGCAATTTCTGATATGCAGA+AGG 0.560064 8.1:+20062067 MS.gene059965:CDS
CTTGATGTTAGAAAAGATGA+AGG 0.562481 8.1:+20062559 MS.gene059965:CDS
TGAAATAATCAGTACTCTGA+AGG 0.562507 8.1:+20064343 MS.gene059965:CDS
GTTATCCGAGCAACTTGTTG+TGG 0.566280 8.1:+20061995 MS.gene059965:CDS
CTCAAACAACTTGTATGTGT+GGG 0.569983 8.1:+20063791 MS.gene059965:CDS
GCTCAAACAACTTGTATGTG+TGG 0.578898 8.1:+20063790 MS.gene059965:CDS
CTGTTGTAGCTGGAGTGGAA+TGG 0.580319 8.1:+20064385 MS.gene059965:CDS
AGACATGGTTCAGCGGCTAA+GGG 0.586487 8.1:+20063455 MS.gene059965:CDS
ACAACTTGCAAGGGAACAAG+TGG 0.587447 8.1:+20063491 MS.gene059965:CDS
GTTCAGCGGCTAAGGGCTAG+TGG 0.589500 8.1:+20063462 MS.gene059965:CDS
ATATTGCATTGACCAGTGGA+AGG 0.590280 8.1:+20064147 MS.gene059965:CDS
GGATGCTGAACGCCTAAATG+AGG 0.592570 8.1:+20062580 MS.gene059965:CDS
AATGCTATAAAGCTCAATCT+CGG 0.592904 8.1:+20061973 MS.gene059965:CDS
TACAGGCTAAATGCACATGA+AGG 0.593778 8.1:+20063585 MS.gene059965:CDS
ACAACAATCATGTTGCCGCT+GGG 0.594947 8.1:+20064279 MS.gene059965:CDS
GTGGTCTAGAACAACTTGCA+AGG 0.596866 8.1:+20063481 MS.gene059965:CDS
TTTATCCGTGTGTCCAGTAA+GGG 0.597962 8.1:-20063841 None:intergenic
TATGGGACATTCAGAGTGGA+AGG 0.603476 8.1:+20064060 MS.gene059965:CDS
TTGTGCGGTTGATGTTAGCA+AGG 0.604078 8.1:+20063866 MS.gene059965:CDS
AGGATCGTTCAGTTAAAGTG+TGG 0.609417 8.1:+20063664 MS.gene059965:CDS
GGATCGTTCAGTTAAAGTGT+GGG 0.613938 8.1:+20063665 MS.gene059965:CDS
CTTGCAAGGGAACAAGTGGA+TGG 0.615284 8.1:+20063495 MS.gene059965:CDS
GGAAATATTGCATTGACCAG+TGG 0.615284 8.1:+20064143 MS.gene059965:CDS
TGGTCTAGAACAACTTGCAA+GGG 0.618737 8.1:+20063482 MS.gene059965:CDS
TTCCTGTCAGCTGAAGCTAG+GGG 0.627368 8.1:-20064413 None:intergenic
TATTGCATTGACCAGTGGAA+GGG 0.632302 8.1:+20064148 MS.gene059965:CDS
TCTAGTAGATTGATTACTGG+GGG 0.632682 8.1:+20063639 MS.gene059965:CDS
GGTACGTACCTGAGAAACGA+TGG 0.636424 8.1:-20061437 None:intergenic
TGTGTCCAGTAAGGGTATGA+CGG 0.638602 8.1:-20063833 None:intergenic
TCATACCCTTACTGGACACA+CGG 0.639635 8.1:+20063836 MS.gene059965:CDS
GAGTGGAAGGCTGCTAAGTG+AGG 0.644822 8.1:+20064073 MS.gene059965:CDS
TGAGATCCAATACTGAGCCA+AGG 0.644864 8.1:-20063728 None:intergenic
AGAAAGGGATATTGACGTGA+CGG 0.645528 8.1:-20064114 None:intergenic
AGGCTAAATGCACATGAAGG+AGG 0.648402 8.1:+20063588 MS.gene059965:CDS
TATATGAAGACATGGTTCAG+CGG 0.657419 8.1:+20063448 MS.gene059965:CDS
GTACGTACCTGAGAAACGAT+GGG 0.661026 8.1:-20061436 None:intergenic
AAATGCGCTATATGAAGACA+TGG 0.661275 8.1:+20063440 MS.gene059965:CDS
TTCTAGTAGATTGATTACTG+GGG 0.672008 8.1:+20063638 MS.gene059965:CDS
CGGTTATGGGACATTCAGAG+TGG 0.682375 8.1:+20064056 MS.gene059965:CDS
ACACACGGATAAAGTTTGTG+CGG 0.689247 8.1:+20063851 MS.gene059965:CDS
AGAAGCCACTCTGTTAACTG+TGG 0.703135 8.1:-20064228 None:intergenic
ACGAGCCACAGTTAACAGAG+TGG 0.730751 8.1:+20064223 MS.gene059965:CDS
AGATCCATCAGTAGACCCAG+CGG 0.753123 8.1:-20064294 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAACAATTTTCATTTTTTTT+AGG + chr8.1:20061467-20061486 MS.gene059965:intron 10.0%
!! AAAAACTCTTATAAGTTTAT+AGG - chr8.1:20062901-20062920 None:intergenic 15.0%
!! AAATGAAAATTGTTAATGAA+AGG - chr8.1:20061462-20061481 None:intergenic 15.0%
!! AAATGTATTATTAGTTGAAT+CGG - chr8.1:20063405-20063424 None:intergenic 15.0%
!! AAGGAAACAATAAAAAAAAA+TGG - chr8.1:20061509-20061528 None:intergenic 15.0%
!! AATGAAAATTGTTAATGAAA+GGG - chr8.1:20061461-20061480 None:intergenic 15.0%
!! ATAAAAAAGTTCGATTAAAC+GGG - chr8.1:20062735-20062754 None:intergenic 20.0%
!! ATGATTGAACTAATTTCTTA+CGG - chr8.1:20061542-20061561 None:intergenic 20.0%
!! GATAAAAAAGTTCGATTAAA+CGG - chr8.1:20062736-20062755 None:intergenic 20.0%
!! TTTATTGTTTCCTTTATTGT+GGG + chr8.1:20061515-20061534 MS.gene059965:intron 20.0%
!!! AATTTACCTATTTTTAACTG+TGG + chr8.1:20061758-20061777 MS.gene059965:intron 20.0%
!!! TTTTATTGTTTCCTTTATTG+TGG + chr8.1:20061514-20061533 MS.gene059965:intron 20.0%
! AAATTAATGTTGCAAAATGC+AGG + chr8.1:20062384-20062403 MS.gene059965:intron 25.0%
! AACTCATAGTGCATAATATT+TGG + chr8.1:20063116-20063135 MS.gene059965:intron 25.0%
! AACTTTCCACAGTTAAAAAT+AGG - chr8.1:20061767-20061786 None:intergenic 25.0%
! AAGTGATGTATTTATGTTGA+AGG + chr8.1:20061902-20061921 MS.gene059965:intron 25.0%
! AAGTTGAAATGAATTTGCAA+TGG + chr8.1:20062774-20062793 MS.gene059965:intron 25.0%
! AATAACAGATCGATTATCAT+TGG - chr8.1:20063760-20063779 None:intergenic 25.0%
! AATATTTCCATTTCGAGAAA+GGG - chr8.1:20064132-20064151 None:intergenic 25.0%
! AATTAATGTTGCAAAATGCA+GGG + chr8.1:20062385-20062404 MS.gene059965:intron 25.0%
! AATTCTAGTAGATTGATTAC+TGG + chr8.1:20063636-20063655 MS.gene059965:CDS 25.0%
! AGTGATGTATTTATGTTGAA+GGG + chr8.1:20061903-20061922 MS.gene059965:intron 25.0%
! ATTCTAGTAGATTGATTACT+GGG + chr8.1:20063637-20063656 MS.gene059965:CDS 25.0%
! CATATATGGTCAATATCTAA+AGG + chr8.1:20064320-20064339 MS.gene059965:CDS 25.0%
! GATTGTATTATACCTCATTT+AGG - chr8.1:20062595-20062614 None:intergenic 25.0%
! TAATTCAATGTGATCACATA+TGG - chr8.1:20061673-20061692 None:intergenic 25.0%
!!! TGAAAAGAAAAAGTACTAAC+TGG - chr8.1:20063237-20063256 None:intergenic 25.0%
!!! TTTTAACTGTGGAAAGTTAT+TGG + chr8.1:20061769-20061788 MS.gene059965:intron 25.0%
AAAGATAGTTGTTTGACTGT+AGG + chr8.1:20062811-20062830 MS.gene059965:intron 30.0%
AAGTACATCAAATCCAATGT+TGG - chr8.1:20063039-20063058 None:intergenic 30.0%
AATACATTTCCCATCTCTTT+AGG + chr8.1:20063416-20063435 MS.gene059965:intron 30.0%
AATGCTATAAAGCTCAATCT+CGG + chr8.1:20061973-20061992 MS.gene059965:CDS 30.0%
ACTAAAAAAAATGTTGGTCG+CGG - chr8.1:20062339-20062358 None:intergenic 30.0%
AGAATTGTACTCGAACAATA+AGG - chr8.1:20063622-20063641 None:intergenic 30.0%
AGTGTATCTTGAAACTATAG+CGG - chr8.1:20062194-20062213 None:intergenic 30.0%
ATTTAGCCTGTATTTGCAAT+TGG - chr8.1:20063577-20063596 None:intergenic 30.0%
CAAATTCTGCTATGGTATAA+CGG - chr8.1:20062165-20062184 None:intergenic 30.0%
CAATATTTCCATTTCGAGAA+AGG - chr8.1:20064133-20064152 None:intergenic 30.0%
CTCTCAATTAAAGACAGATT+TGG + chr8.1:20062415-20062434 MS.gene059965:CDS 30.0%
CTTGATGTTAGAAAAGATGA+AGG + chr8.1:20062559-20062578 MS.gene059965:CDS 30.0%
TACAAAATGTTGTCCAATAG+CGG + chr8.1:20062220-20062239 MS.gene059965:intron 30.0%
TAGTTCCAAAAGTTGTATAC+TGG - chr8.1:20062630-20062649 None:intergenic 30.0%
TCAAACAACTATCTTTGACA+AGG - chr8.1:20062807-20062826 None:intergenic 30.0%
TCGCAGACTAAAAAAAATGT+TGG - chr8.1:20062345-20062364 None:intergenic 30.0%
TGAAATAATCAGTACTCTGA+AGG + chr8.1:20064343-20064362 MS.gene059965:CDS 30.0%
TTCTAGTAGATTGATTACTG+GGG + chr8.1:20063638-20063657 MS.gene059965:CDS 30.0%
! ACTACTAAGCACTATTCTTT+TGG - chr8.1:20061570-20061589 None:intergenic 30.0%
! AGAACCTTCTGAAAAAATTG+AGG - chr8.1:20062855-20062874 None:intergenic 30.0%
! AGTCCCAAACTTTTATAGTA+CGG - chr8.1:20063926-20063945 None:intergenic 30.0%
! TAGCTGCTATTTAACAACAT+TGG - chr8.1:20062137-20062156 None:intergenic 30.0%
! TCATCTTTTCTAACATCAAG+CGG - chr8.1:20062559-20062578 None:intergenic 30.0%
! TGCATTTTCTTTCTCTTGAA+GGG - chr8.1:20062051-20062070 None:intergenic 30.0%
! TTGCATTTTCTTTCTCTTGA+AGG - chr8.1:20062052-20062071 None:intergenic 30.0%
!!! ACTTTTTTATCAGCACTTGA+AGG + chr8.1:20062745-20062764 MS.gene059965:intron 30.0%
!!! TGTACCTCAATTTTTTCAGA+AGG + chr8.1:20062848-20062867 MS.gene059965:intron 30.0%
AAACTAAGCTTCAAGCTTGT+AGG - chr8.1:20062972-20062991 None:intergenic 35.0%
AAAGTGTGGGATACAAATAC+AGG + chr8.1:20063678-20063697 MS.gene059965:CDS 35.0%
AAATGCGCTATATGAAGACA+TGG + chr8.1:20063440-20063459 MS.gene059965:CDS 35.0%
ACGACCGTACTATAAAAGTT+TGG + chr8.1:20063919-20063938 MS.gene059965:CDS 35.0%
ATCGACATGTCCAGAAAATA+TGG - chr8.1:20064027-20064046 None:intergenic 35.0%
CGACCGTACTATAAAAGTTT+GGG + chr8.1:20063920-20063939 MS.gene059965:CDS 35.0%
CGTTATACCATAGCAGAATT+TGG + chr8.1:20062163-20062182 MS.gene059965:intron 35.0%
CTATTCTCGATTGACAACAT+TGG + chr8.1:20062307-20062326 MS.gene059965:intron 35.0%
CTCAAACAACTTGTATGTGT+GGG + chr8.1:20063791-20063810 MS.gene059965:CDS 35.0%
GGAATGGAATTGTTTCAATC+TGG + chr8.1:20064432-20064451 MS.gene059965:CDS 35.0%
TATATGAAGACATGGTTCAG+CGG + chr8.1:20063448-20063467 MS.gene059965:CDS 35.0%
TCAATATCCCTTTCTCGAAA+TGG + chr8.1:20064122-20064141 MS.gene059965:CDS 35.0%
TCCTTAAGTTCAAGTCTTAC+TGG + chr8.1:20063702-20063721 MS.gene059965:CDS 35.0%
TCGAGAATAGCAGAAAATAG+TGG - chr8.1:20062297-20062316 None:intergenic 35.0%
TCTAGTAGATTGATTACTGG+GGG + chr8.1:20063639-20063658 MS.gene059965:CDS 35.0%
TGCAATTTCTGATATGCAGA+AGG + chr8.1:20062067-20062086 MS.gene059965:CDS 35.0%
TTAACAGAGTGGCTTCTAAT+TGG + chr8.1:20064234-20064253 MS.gene059965:CDS 35.0%
TTCAGAATGTTGCTCGATAT+TGG + chr8.1:20061810-20061829 MS.gene059965:intron 35.0%
! AAAGTTTGGGACTTGATGAA+AGG + chr8.1:20063933-20063952 MS.gene059965:CDS 35.0%
! ATATTTTCTGGACATGTCGA+TGG + chr8.1:20064026-20064045 MS.gene059965:CDS 35.0%
! CTATACATTTTCCGTGTGAA+TGG + chr8.1:20062662-20062681 MS.gene059965:intron 35.0%
! TCAATCGCAACTTGTTCTTT+CGG - chr8.1:20061328-20061347 None:intergenic 35.0%
! TTCAGAACTAAAAGCACAAC+TGG + chr8.1:20062478-20062497 MS.gene059965:CDS 35.0%
!! ATTTTCCGTGTGAATGGATT+TGG + chr8.1:20062668-20062687 MS.gene059965:intron 35.0%
!!! AGCTTTTGAAACTCTAGACT+CGG - chr8.1:20062027-20062046 None:intergenic 35.0%
!!! TTATGTTGAAGGGTTTTGAG+TGG + chr8.1:20061913-20061932 MS.gene059965:intron 35.0%
ACACACGGATAAAGTTTGTG+CGG + chr8.1:20063851-20063870 MS.gene059965:CDS 40.0%
AGAAAGGGATATTGACGTGA+CGG - chr8.1:20064117-20064136 None:intergenic 40.0%
AGAAGGAGTTGACAGAATTG+AGG + chr8.1:20062084-20062103 MS.gene059965:CDS 40.0%
AGCCTGTATTTGCAATTGGA+AGG - chr8.1:20063573-20063592 None:intergenic 40.0%
AGGATCGTTCAGTTAAAGTG+TGG + chr8.1:20063664-20063683 MS.gene059965:CDS 40.0%
ATTGTTCGTCGAAGTGAAGA+AGG + chr8.1:20063519-20063538 MS.gene059965:CDS 40.0%
CAAAGCCAAATCCATTCACA+CGG - chr8.1:20062676-20062695 None:intergenic 40.0%
CAGCAATTTCACACCAACAT+TGG + chr8.1:20063023-20063042 MS.gene059965:intron 40.0%
CGATGGTAATCTTCGGTTAT+GGG + chr8.1:20064043-20064062 MS.gene059965:CDS 40.0%
GAAAGAGAAAGCAGAGAACT+TGG + chr8.1:20061935-20061954 MS.gene059965:CDS 40.0%
GACATGTCGATGGTAATCTT+CGG + chr8.1:20064036-20064055 MS.gene059965:CDS 40.0%
GCCAGTAAGACTTGAACTTA+AGG - chr8.1:20063706-20063725 None:intergenic 40.0%
GCCTGTATTTGCAATTGGAA+GGG - chr8.1:20063572-20063591 None:intergenic 40.0%
GCTATAGCACTATTGTGTAG+CGG + chr8.1:20062259-20062278 MS.gene059965:intron 40.0%
GCTCAAACAACTTGTATGTG+TGG + chr8.1:20063790-20063809 MS.gene059965:CDS 40.0%
GGATCGTTCAGTTAAAGTGT+GGG + chr8.1:20063665-20063684 MS.gene059965:CDS 40.0%
GGTTTGTCCAAATTCTGCTA+TGG - chr8.1:20062173-20062192 None:intergenic 40.0%
GTTATTAACTCTTGTAGCGC+CGG + chr8.1:20061595-20061614 MS.gene059965:intron 40.0%
TACAGGCTAAATGCACATGA+AGG + chr8.1:20063585-20063604 MS.gene059965:CDS 40.0%
TACTTCCACAACAAGTTGCT+CGG - chr8.1:20062003-20062022 None:intergenic 40.0%
TCCCTTCCAATTGCAAATAC+AGG + chr8.1:20063568-20063587 MS.gene059965:CDS 40.0%
TCGATGGTAATCTTCGGTTA+TGG + chr8.1:20064042-20064061 MS.gene059965:CDS 40.0%
TTCTTACGGACCCACAATAA+AGG - chr8.1:20061528-20061547 None:intergenic 40.0%
TTGGTTGCTTGGATAGTTGA+TGG + chr8.1:20061840-20061859 MS.gene059965:intron 40.0%
TTTATCCGTGTGTCCAGTAA+GGG - chr8.1:20063844-20063863 None:intergenic 40.0%
TTTGTTTGATGTGCGATCTC+TGG + chr8.1:20064184-20064203 MS.gene059965:CDS 40.0%
! ACACATTCAATCAGAAGTGC+CGG - chr8.1:20061617-20061636 None:intergenic 40.0%
! ATATTGCATTGACCAGTGGA+AGG + chr8.1:20064147-20064166 MS.gene059965:CDS 40.0%
! CTCGTCCAGTATACAACTTT+TGG + chr8.1:20062622-20062641 MS.gene059965:intron 40.0%
! CTGATGGATCTGTGCATATA+TGG + chr8.1:20064306-20064325 MS.gene059965:CDS 40.0%
! GATGGACAGACCATATTTTC+TGG + chr8.1:20064014-20064033 MS.gene059965:CDS 40.0%
! GGAAATATTGCATTGACCAG+TGG + chr8.1:20064143-20064162 MS.gene059965:CDS 40.0%
! TATTGCATTGACCAGTGGAA+GGG + chr8.1:20064148-20064167 MS.gene059965:CDS 40.0%
! TGGTCTAGAACAACTTGCAA+GGG + chr8.1:20063482-20063501 MS.gene059965:CDS 40.0%
!! GCTCGATATTGGTGTTAAGT+TGG + chr8.1:20061821-20061840 MS.gene059965:intron 40.0%
!! GTTCACATCATAGTCTTGTG+AGG - chr8.1:20063334-20063353 None:intergenic 40.0%
!! TTGGTGTTAAGTTGGTTGCT+TGG + chr8.1:20061829-20061848 MS.gene059965:intron 40.0%
AAACGCCATCTTCTCGAAGA+AGG + chr8.1:20061379-20061398 MS.gene059965:CDS 45.0%
ACAACAATCATGTTGCCGCT+GGG + chr8.1:20064279-20064298 MS.gene059965:CDS 45.0%
ACAACTTGCAAGGGAACAAG+TGG + chr8.1:20063491-20063510 MS.gene059965:CDS 45.0%
AGAAGCCACTCTGTTAACTG+TGG - chr8.1:20064231-20064250 None:intergenic 45.0%
AGCGCATTTGCCTAAAGAGA+TGG - chr8.1:20063429-20063448 None:intergenic 45.0%
AGGCTAAATGCACATGAAGG+AGG + chr8.1:20063588-20063607 MS.gene059965:CDS 45.0%
AGGTAAATGACACTTGCCAG+TGG - chr8.1:20063000-20063019 None:intergenic 45.0%
ATTCCTGTCAGCTGAAGCTA+GGG - chr8.1:20064417-20064436 None:intergenic 45.0%
CTTCTGTTCTCTGTTGTAGC+TGG + chr8.1:20064375-20064394 MS.gene059965:CDS 45.0%
CTTTATCCGTGTGTCCAGTA+AGG - chr8.1:20063845-20063864 None:intergenic 45.0%
GAAAGCAGAGAACTTGGAAG+TGG + chr8.1:20061941-20061960 MS.gene059965:CDS 45.0%
GCGCATTTGCCTAAAGAGAT+GGG - chr8.1:20063428-20063447 None:intergenic 45.0%
GGCAAGTTGTGCAATCTTGA+CGG + chr8.1:20062695-20062714 MS.gene059965:intron 45.0%
GTACGTACCTGAGAAACGAT+GGG - chr8.1:20061439-20061458 None:intergenic 45.0%
GTGCAAATTATCCCTTCCAC+TGG - chr8.1:20064162-20064181 None:intergenic 45.0%
GTTCACAACACAGTCTCGTT+AGG - chr8.1:20063190-20063209 None:intergenic 45.0%
TAGATTGATTACTGGGGGAC+AGG + chr8.1:20063644-20063663 MS.gene059965:CDS 45.0%
TATGGGACATTCAGAGTGGA+AGG + chr8.1:20064060-20064079 MS.gene059965:CDS 45.0%
TATGTGTGGGATCTTAGCTC+AGG + chr8.1:20063804-20063823 MS.gene059965:CDS 45.0%
TCATACCCTTACTGGACACA+CGG + chr8.1:20063836-20063855 MS.gene059965:CDS 45.0%
TGAGATCCAATACTGAGCCA+AGG - chr8.1:20063731-20063750 None:intergenic 45.0%
TGTCAGTGTCTGACATGTGT+CGG + chr8.1:20061636-20061655 MS.gene059965:intron 45.0%
TGTTGTAGCTGGAGTGGAAT+GGG + chr8.1:20064386-20064405 MS.gene059965:CDS 45.0%
TTCTAGACCCATCGTTTCTC+AGG + chr8.1:20061429-20061448 MS.gene059965:CDS 45.0%
TTGGTGTGAAATTGCTGAGC+AGG - chr8.1:20063020-20063039 None:intergenic 45.0%
TTGTCCAATAGCGGCTATAG+TGG + chr8.1:20062229-20062248 MS.gene059965:intron 45.0%
! CGTGTGAATGGATTTGGCTT+TGG + chr8.1:20062674-20062693 MS.gene059965:intron 45.0%
! CTAGAAAGTGCGAGAAAAGC+AGG - chr8.1:20061415-20061434 None:intergenic 45.0%
! GTGGTCTAGAACAACTTGCA+AGG + chr8.1:20063481-20063500 MS.gene059965:CDS 45.0%
! TGTGTCCAGTAAGGGTATGA+CGG - chr8.1:20063836-20063855 None:intergenic 45.0%
! TTGTGCGGTTGATGTTAGCA+AGG + chr8.1:20063866-20063885 MS.gene059965:CDS 45.0%
!! CAAAGAGCATTGCAGTTGCT+GGG - chr8.1:20063984-20064003 None:intergenic 45.0%
!! GTTATCCGAGCAACTTGTTG+TGG + chr8.1:20061995-20062014 MS.gene059965:CDS 45.0%
AAATGACACTTGCCAGTGGC+AGG - chr8.1:20062996-20063015 None:intergenic 50.0%
AAGACATGGTTCAGCGGCTA+AGG + chr8.1:20063454-20063473 MS.gene059965:CDS 50.0%
ACGAGCCACAGTTAACAGAG+TGG + chr8.1:20064223-20064242 MS.gene059965:CDS 50.0%
AGACATGGTTCAGCGGCTAA+GGG + chr8.1:20063455-20063474 MS.gene059965:CDS 50.0%
AGATCCATCAGTAGACCCAG+CGG - chr8.1:20064297-20064316 None:intergenic 50.0%
AGCACCACTATAGCCGCTAT+TGG - chr8.1:20062236-20062255 None:intergenic 50.0%
CATTCCTGTCAGCTGAAGCT+AGG - chr8.1:20064418-20064437 None:intergenic 50.0%
CGGTTATGGGACATTCAGAG+TGG + chr8.1:20064056-20064075 MS.gene059965:CDS 50.0%
CTAGCTTCAGCTGACAGGAA+TGG + chr8.1:20064416-20064435 MS.gene059965:CDS 50.0%
CTGTTGTAGCTGGAGTGGAA+TGG + chr8.1:20064385-20064404 MS.gene059965:CDS 50.0%
CTTGCAAGGGAACAAGTGGA+TGG + chr8.1:20063495-20063514 MS.gene059965:CDS 50.0%
GACAACAATCATGTTGCCGC+TGG + chr8.1:20064278-20064297 MS.gene059965:CDS 50.0%
GCGGCAACATGATTGTTGTC+TGG - chr8.1:20064278-20064297 None:intergenic 50.0%
GCTCTTTGCTTCAGCACAGA+TGG + chr8.1:20063996-20064015 MS.gene059965:CDS 50.0%
GGATGCTGAACGCCTAAATG+AGG + chr8.1:20062580-20062599 MS.gene059965:CDS 50.0%
GGTACGTACCTGAGAAACGA+TGG - chr8.1:20061440-20061459 None:intergenic 50.0%
GTTCTCTGTTGTAGCTGGAG+TGG + chr8.1:20064380-20064399 MS.gene059965:CDS 50.0%
TTCCTGTCAGCTGAAGCTAG+GGG - chr8.1:20064416-20064435 None:intergenic 50.0%
! GTGCGATCTCTGGAAGTTTG+TGG + chr8.1:20064194-20064213 MS.gene059965:CDS 50.0%
! TCAAGTCTTACTGGCTGCCT+TGG + chr8.1:20063711-20063730 MS.gene059965:CDS 50.0%
!! AAGCTTAGTTTGCCTGCCAC+TGG + chr8.1:20062981-20063000 MS.gene059965:intron 50.0%
!! GCAAAGAGCATTGCAGTTGC+TGG - chr8.1:20063985-20064004 None:intergenic 50.0%
AACCCCTAGCTTCAGCTGAC+AGG + chr8.1:20064411-20064430 MS.gene059965:CDS 55.0%
CGAGTCCGTCATACCCTTAC+TGG + chr8.1:20063828-20063847 MS.gene059965:CDS 55.0%
GAGCGCCTTCTTCGAGAAGA+TGG - chr8.1:20061387-20061406 None:intergenic 55.0%
GAGTGGAAGGCTGCTAAGTG+AGG + chr8.1:20064073-20064092 MS.gene059965:CDS 55.0%
TGGCTGCCTTGGCTCAGTAT+TGG + chr8.1:20063722-20063741 MS.gene059965:CDS 55.0%
GTTCAGCGGCTAAGGGCTAG+TGG + chr8.1:20063462-20063481 MS.gene059965:CDS 60.0%
GTTGCCGCTGGGTCTACTGA+TGG + chr8.1:20064290-20064309 MS.gene059965:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 20061307 20064460 20061307 ID=MS.gene059965
chr8.1 mRNA 20061307 20064460 20061307 ID=MS.gene059965.t1;Parent=MS.gene059965
chr8.1 exon 20061307 20061450 20061307 ID=MS.gene059965.t1.exon1;Parent=MS.gene059965.t1
chr8.1 CDS 20061307 20061450 20061307 ID=cds.MS.gene059965.t1;Parent=MS.gene059965.t1
chr8.1 exon 20061924 20062105 20061924 ID=MS.gene059965.t1.exon2;Parent=MS.gene059965.t1
chr8.1 CDS 20061924 20062105 20061924 ID=cds.MS.gene059965.t1;Parent=MS.gene059965.t1
chr8.1 exon 20062406 20062601 20062406 ID=MS.gene059965.t1.exon3;Parent=MS.gene059965.t1
chr8.1 CDS 20062406 20062601 20062406 ID=cds.MS.gene059965.t1;Parent=MS.gene059965.t1
chr8.1 exon 20063438 20064460 20063438 ID=MS.gene059965.t1.exon4;Parent=MS.gene059965.t1
chr8.1 CDS 20063438 20064460 20063438 ID=cds.MS.gene059965.t1;Parent=MS.gene059965.t1
Gene Sequence

>MS.gene059965

ATGGTGAAAACTGGAAGACCGAAAGAACAAGTTGCGATTGATGCAATCAATTATGCTATGAAAGCTCTCAAGAAACGCCATCTTCTCGAAGAAGGCGCTCATGCTCCTGCTTTTCTCGCACTTTCTAGACCCATCGTTTCTCAGGTACGTACCCTTTCATTAACAATTTTCATTTTTTTTAGGTATCACACATGAATATCCATTTTTTTTTATTGTTTCCTTTATTGTGGGTCCGTAAGAAATTAGTTCAATCATGAGTTCCAAAAGAATAGTGCTTAGTAGTTAATAGTTATTAACTCTTGTAGCGCCGGCACTTCTGATTGAATGTGTGTCAGTGTCTGACATGTGTCGGTGTCGAACACTCCATATGTGATCACATTGAATTATGTCATTTTTTCAAATTATTATCAGTGTCAACTCGCGAGTGTCTGTGTTTCATAAGTTGTGTACAAATTTACCTATTTTTAACTGTGGAAAGTTATTGGCTTTTGATGATGTCATATTTCAGAATGTTGCTCGATATTGGTGTTAAGTTGGTTGCTTGGATAGTTGATGGTTGTTTATGTGTTACAATTGTATTTTTGTTTTGTTGATTAAGTGATGTATTTATGTTGAAGGGTTTTGAGTGGAAAGAGAAAGCAGAGAACTTGGAAGTGGAACTTCAGCAATGCTATAAAGCTCAATCTCGGTTATCCGAGCAACTTGTTGTGGAAGTAGCCGAGTCTAGAGTTTCAAAAGCTTCCCTTCAAGAGAAAGAAAATGCAATTTCTGATATGCAGAAGGAGTTGACAGAATTGAGGTTGCTTGATGTTTCTTATATGTTGTAACCAATGTTGTTAAATAGCAGCTATAGCACCGTTATACCATAGCAGAATTTGGACAAACCGCTATAGTTTCAAGATACACTATTTAGTACAAAATGTTGTCCAATAGCGGCTATAGTGGTGCTATTGCTATAGCACTATTGTGTAGCGGAATTTTAGAAATCCACTATTTTCTGCTATTCTCGATTGACAACATTGGTTGTAACCGCGACCAACATTTTTTTTAGTCTGCGATAAATGAGTTTTTTTACTTAAATTAATGTTGCAAAATGCAGGGATGAGTGCTCTCAATTAAAGACAGATTTGGAGCAAAAGACTAAAGAAGTAGAATTAGTTCTGAGCGAGAATTCAGAACTAAAAGCACAACTGGAGCAGATGACTACTAAAGCTAATGAAGCTGAAGCTGAAAATAAGATGTTGATTGACCGCTTGATGTTAGAAAAGATGAAGGATGCTGAACGCCTAAATGAGGTATAATACAATCTCATATTCTCGTCCAGTATACAACTTTTGGAACTAGATATTAGTTTTCTATACATTTTCCGTGTGAATGGATTTGGCTTTGGCAAGTTGTGCAATCTTGACGGAAATACTCTTAGAGCCCGTTTAATCGAACTTTTTTATCAGCACTTGAAGGAGAAGAAAGTTGAAATGAATTTGCAATGGTTATTTGCCTTGTCAAAGATAGTTGTTTGACTGTAGGTAGAAATTAGTTTCTGTACCTCAATTTTTTCAGAAGGTTCTGTATTTAAAATTATGCATCAACACCTATAAACTTATAAGAGTTTTTTCATAAGTTAGTAATTAAATGTTGAATATTTATCTTATTTGAGAAGCTCCTACAAGCTTGAAGCTTAGTTTGCCTGCCACTGGCAAGTGTCATTTACCTGCTCAGCAATTTCACACCAACATTGGATTTGATGTACTTCTAATTTTTTTATGTTTTGAAATTTGAATCTTACTAGTTAGTAGTTTTTCTATTCAAAACTCATAGTGCATAATATTTGGATCGCTGTAATAGTTACATTAGTAGTTTATATTTCTTACATGTAGAGTCCTAACGAGACTGTGTTGTGAACAAATTCTAGTTTCATTTAATATTACCAGTTAGTACTTTTTCTTTTCAAAACTTGTAGTGCATAATATATTTGAATCACTGTGATAGTTACATTAGTAGATTATATTTCTTACATGTAGATTCCTCACAAGACTATGATGTGAACAAGTTCTAGTTGCATATAATTGTAATTTGTAAATAACAACTTATGTTGCCGATTCAACTAATAATACATTTCCCATCTCTTTAGGCAAATGCGCTATATGAAGACATGGTTCAGCGGCTAAGGGCTAGTGGTCTAGAACAACTTGCAAGGGAACAAGTGGATGGAATTGTTCGTCGAAGTGAAGAAGGTGCTGAATTCTTTTCAGAGTCAAACATCCCTTCCAATTGCAAATACAGGCTAAATGCACATGAAGGAGGTTGTGCTTCCTTATTGTTCGAGTACAATTCTAGTAGATTGATTACTGGGGGACAGGATCGTTCAGTTAAAGTGTGGGATACAAATACAGGATCCTTAAGTTCAAGTCTTACTGGCTGCCTTGGCTCAGTATTGGATCTCACTATCACCAATGATAATCGATCTGTTATTGCTGCGAGCAGCTCAAACAACTTGTATGTGTGGGATCTTAGCTCAGGTCGAGTCCGTCATACCCTTACTGGACACACGGATAAAGTTTGTGCGGTTGATGTTAGCAAGGTTTCGAGTCGTCTTGTTGTCAGTGCAGCTTACGACCGTACTATAAAAGTTTGGGACTTGATGAAAGGTTACTGCACAAACACAATCATGTTTCCCAGCAACTGCAATGCTCTTTGCTTCAGCACAGATGGACAGACCATATTTTCTGGACATGTCGATGGTAATCTTCGGTTATGGGACATTCAGAGTGGAAGGCTGCTAAGTGAGGTTGCTGCACATTCACACGCCGTCACGTCAATATCCCTTTCTCGAAATGGAAATATTGCATTGACCAGTGGAAGGGATAATTTGCACAATTTGTTTGATGTGCGATCTCTGGAAGTTTGTGGTACATTACGAGCCACAGTTAACAGAGTGGCTTCTAATTGGAGTCGCTCATGTATCAGTCCAGACAACAATCATGTTGCCGCTGGGTCTACTGATGGATCTGTGCATATATGGTCAATATCTAAAGGTGAAATAATCAGTACTCTGAAGGAGCATACTTCTTCTGTTCTCTGTTGTAGCTGGAGTGGAATGGGAAAACCCCTAGCTTCAGCTGACAGGAATGGAATTGTTTCAATCTGGTCATAA

Protein sequence

>MS.gene059965.t1

MVKTGRPKEQVAIDAINYAMKALKKRHLLEEGAHAPAFLALSRPIVSQGFEWKEKAENLEVELQQCYKAQSRLSEQLVVEVAESRVSKASLQEKENAISDMQKELTELRDECSQLKTDLEQKTKEVELVLSENSELKAQLEQMTTKANEAEAENKMLIDRLMLEKMKDAERLNEANALYEDMVQRLRASGLEQLAREQVDGIVRRSEEGAEFFSESNIPSNCKYRLNAHEGGCASLLFEYNSSRLITGGQDRSVKVWDTNTGSLSSSLTGCLGSVLDLTITNDNRSVIAASSSNNLYVWDLSSGRVRHTLTGHTDKVCAVDVSKVSSRLVVSAAYDRTIKVWDLMKGYCTNTIMFPSNCNALCFSTDGQTIFSGHVDGNLRLWDIQSGRLLSEVAAHSHAVTSISLSRNGNIALTSGRDNLHNLFDVRSLEVCGTLRATVNRVASNWSRSCISPDNNHVAAGSTDGSVHIWSISKGEIISTLKEHTSSVLCCSWSGMGKPLASADRNGIVSIWS