Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77185.t1 | XP_024632480.1 | 87 | 207 | 26 | 1 | 1 | 206 | 1 | 207 | 1.70E-95 | 359 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77185.t1 | Q6AVN2 | 38.6 | 88 | 42 | 2 | 75 | 161 | 177 | 253 | 1.5e-12 | 74.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77185.t1 | A0A072V812 | 87.0 | 207 | 26 | 1 | 1 | 206 | 1 | 207 | 1.2e-95 | 359.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049321 | MS.gene77185 | 0.81017 | 1.32E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77185.t1 | MTR_2g061790 | 92.735 | 234 | 12 | 2 | 1 | 233 | 1 | 230 | 5.54e-132 | 371 |
MS.gene77185.t1 | MTR_1g095030 | 52.941 | 119 | 39 | 4 | 115 | 231 | 19 | 122 | 1.40e-25 | 97.1 |
MS.gene77185.t1 | MTR_1g114320 | 34.194 | 155 | 95 | 2 | 75 | 229 | 166 | 313 | 3.90e-20 | 87.4 |
MS.gene77185.t1 | MTR_4g110100 | 46.429 | 84 | 40 | 1 | 75 | 158 | 332 | 410 | 9.13e-19 | 84.7 |
MS.gene77185.t1 | MTR_7g074170 | 36.000 | 100 | 59 | 1 | 76 | 175 | 318 | 412 | 1.16e-18 | 84.7 |
MS.gene77185.t1 | MTR_1g114620 | 44.318 | 88 | 41 | 1 | 75 | 162 | 239 | 318 | 1.26e-17 | 80.5 |
MS.gene77185.t1 | MTR_2g097620 | 40.426 | 94 | 47 | 2 | 75 | 168 | 162 | 246 | 1.42e-17 | 80.9 |
MS.gene77185.t1 | MTR_6g079660 | 43.529 | 85 | 43 | 1 | 75 | 159 | 207 | 286 | 1.65e-17 | 80.9 |
MS.gene77185.t1 | MTR_4g064570 | 44.000 | 75 | 36 | 1 | 75 | 149 | 154 | 222 | 1.26e-15 | 75.5 |
MS.gene77185.t1 | MTR_6g016350 | 54.717 | 53 | 24 | 0 | 106 | 158 | 309 | 361 | 2.12e-15 | 74.7 |
MS.gene77185.t1 | MTR_5g088720 | 41.892 | 74 | 37 | 1 | 76 | 149 | 174 | 241 | 2.81e-14 | 71.2 |
MS.gene77185.t1 | MTR_5g088720 | 41.892 | 74 | 37 | 1 | 76 | 149 | 179 | 246 | 2.82e-14 | 71.2 |
MS.gene77185.t1 | MTR_3g072630 | 38.947 | 95 | 45 | 3 | 62 | 149 | 174 | 262 | 3.16e-14 | 70.9 |
MS.gene77185.t1 | MTR_5g088720 | 41.892 | 74 | 37 | 1 | 76 | 149 | 220 | 287 | 3.47e-14 | 71.2 |
MS.gene77185.t1 | MTR_3g072630 | 38.947 | 95 | 45 | 3 | 62 | 149 | 174 | 262 | 4.99e-14 | 70.5 |
MS.gene77185.t1 | MTR_2g007340 | 39.796 | 98 | 50 | 3 | 55 | 149 | 151 | 242 | 7.67e-14 | 69.7 |
MS.gene77185.t1 | MTR_3g083480 | 37.805 | 82 | 40 | 1 | 75 | 156 | 215 | 285 | 8.04e-14 | 70.1 |
MS.gene77185.t1 | MTR_5g080350 | 34.783 | 92 | 53 | 2 | 76 | 167 | 168 | 252 | 6.72e-13 | 67.4 |
MS.gene77185.t1 | MTR_1g014710 | 32.099 | 81 | 52 | 1 | 75 | 155 | 203 | 280 | 3.31e-12 | 65.1 |
MS.gene77185.t1 | MTR_3g068005 | 35.294 | 85 | 49 | 1 | 76 | 160 | 170 | 248 | 6.39e-12 | 64.7 |
MS.gene77185.t1 | MTR_6g032960 | 29.825 | 114 | 62 | 2 | 53 | 159 | 185 | 287 | 2.46e-11 | 62.8 |
MS.gene77185.t1 | MTR_1g051105 | 36.486 | 74 | 41 | 2 | 76 | 149 | 133 | 200 | 3.53e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77185.t1 | AT3G60080 | 33.597 | 253 | 85 | 7 | 8 | 190 | 13 | 252 | 5.71e-27 | 105 |
MS.gene77185.t1 | AT2G44330 | 30.769 | 156 | 82 | 4 | 1 | 149 | 1 | 137 | 1.47e-18 | 80.5 |
MS.gene77185.t1 | AT5G01980 | 36.220 | 127 | 77 | 2 | 44 | 166 | 282 | 408 | 5.97e-16 | 76.6 |
MS.gene77185.t1 | AT5G15820 | 44.000 | 75 | 37 | 1 | 75 | 149 | 263 | 332 | 6.09e-16 | 76.3 |
MS.gene77185.t1 | AT5G08139 | 34.783 | 92 | 50 | 2 | 63 | 149 | 264 | 350 | 2.13e-15 | 74.7 |
MS.gene77185.t1 | AT3G56580 | 44.595 | 74 | 36 | 1 | 76 | 149 | 159 | 227 | 2.23e-15 | 74.3 |
MS.gene77185.t1 | AT3G56580 | 44.595 | 74 | 36 | 1 | 76 | 149 | 159 | 227 | 2.23e-15 | 74.3 |
MS.gene77185.t1 | AT3G56580 | 44.595 | 74 | 36 | 1 | 76 | 149 | 159 | 227 | 2.23e-15 | 74.3 |
MS.gene77185.t1 | AT2G40830 | 43.243 | 74 | 37 | 1 | 76 | 149 | 163 | 231 | 6.25e-15 | 73.2 |
MS.gene77185.t1 | AT2G40830 | 43.243 | 74 | 37 | 1 | 76 | 149 | 163 | 231 | 6.25e-15 | 73.2 |
MS.gene77185.t1 | AT2G40830 | 43.243 | 74 | 37 | 1 | 76 | 149 | 163 | 231 | 6.25e-15 | 73.2 |
MS.gene77185.t1 | AT2G40830 | 43.243 | 74 | 37 | 1 | 76 | 149 | 163 | 231 | 6.25e-15 | 73.2 |
MS.gene77185.t1 | AT3G02340 | 44.000 | 75 | 37 | 2 | 75 | 149 | 307 | 376 | 6.32e-15 | 73.6 |
MS.gene77185.t1 | AT3G02340 | 44.000 | 75 | 37 | 2 | 75 | 149 | 307 | 376 | 6.32e-15 | 73.6 |
MS.gene77185.t1 | AT5G59550 | 45.588 | 68 | 35 | 1 | 108 | 173 | 304 | 371 | 9.50e-15 | 73.2 |
MS.gene77185.t1 | AT1G60360 | 37.037 | 108 | 57 | 2 | 76 | 177 | 197 | 299 | 1.18e-14 | 72.4 |
MS.gene77185.t1 | AT5G59550 | 35.644 | 101 | 57 | 2 | 75 | 173 | 172 | 266 | 1.60e-14 | 72.4 |
MS.gene77185.t1 | AT3G19950 | 36.364 | 88 | 51 | 1 | 75 | 162 | 246 | 328 | 2.83e-14 | 71.6 |
MS.gene77185.t1 | AT3G19950 | 36.364 | 88 | 51 | 1 | 75 | 162 | 246 | 328 | 2.83e-14 | 71.6 |
MS.gene77185.t1 | AT3G19950 | 36.364 | 88 | 51 | 1 | 75 | 162 | 188 | 270 | 2.83e-14 | 71.2 |
MS.gene77185.t1 | AT2G39720 | 43.243 | 74 | 38 | 1 | 76 | 149 | 173 | 242 | 3.90e-14 | 71.2 |
MS.gene77185.t1 | AT2G39720 | 43.243 | 74 | 38 | 1 | 76 | 149 | 173 | 242 | 3.90e-14 | 71.2 |
MS.gene77185.t1 | AT3G46620 | 33.333 | 99 | 60 | 1 | 75 | 173 | 188 | 280 | 8.30e-14 | 70.1 |
MS.gene77185.t1 | AT5G64920 | 47.458 | 59 | 31 | 0 | 105 | 163 | 254 | 312 | 1.50e-13 | 69.3 |
MS.gene77185.t1 | AT3G30460 | 46.939 | 49 | 26 | 0 | 104 | 152 | 93 | 141 | 2.52e-13 | 65.9 |
MS.gene77185.t1 | AT3G30460 | 46.939 | 49 | 26 | 0 | 104 | 152 | 129 | 177 | 3.10e-13 | 66.2 |
MS.gene77185.t1 | AT3G10815 | 27.059 | 170 | 92 | 7 | 14 | 158 | 9 | 171 | 3.42e-13 | 66.6 |
MS.gene77185.t1 | AT1G55530 | 37.805 | 82 | 40 | 1 | 75 | 156 | 201 | 271 | 3.54e-13 | 68.2 |
MS.gene77185.t1 | AT1G55530 | 37.805 | 82 | 40 | 1 | 75 | 156 | 201 | 271 | 3.54e-13 | 68.2 |
MS.gene77185.t1 | AT1G55530 | 37.805 | 82 | 40 | 1 | 75 | 156 | 168 | 238 | 3.69e-13 | 67.8 |
MS.gene77185.t1 | AT5G60820 | 38.667 | 75 | 44 | 1 | 75 | 149 | 341 | 413 | 5.85e-13 | 67.8 |
MS.gene77185.t1 | AT5G56340 | 32.692 | 104 | 57 | 2 | 75 | 178 | 237 | 327 | 1.02e-12 | 67.0 |
MS.gene77185.t1 | AT1G68180 | 28.659 | 164 | 81 | 7 | 15 | 149 | 23 | 179 | 1.41e-12 | 65.5 |
MS.gene77185.t1 | AT3G13430 | 36.000 | 75 | 38 | 1 | 75 | 149 | 202 | 266 | 4.33e-12 | 64.7 |
MS.gene77185.t1 | AT3G13430 | 36.000 | 75 | 38 | 1 | 75 | 149 | 202 | 266 | 4.33e-12 | 64.7 |
MS.gene77185.t1 | AT3G13430 | 36.000 | 75 | 38 | 1 | 75 | 149 | 202 | 266 | 4.33e-12 | 64.7 |
MS.gene77185.t1 | AT3G13430 | 36.000 | 75 | 38 | 1 | 75 | 149 | 202 | 266 | 4.33e-12 | 64.7 |
MS.gene77185.t1 | AT4G26400 | 33.333 | 81 | 43 | 1 | 77 | 157 | 221 | 290 | 1.01e-11 | 63.9 |
MS.gene77185.t1 | AT4G26400 | 33.333 | 81 | 43 | 1 | 77 | 157 | 221 | 290 | 1.01e-11 | 63.9 |
MS.gene77185.t1 | AT5G20910 | 27.679 | 112 | 64 | 2 | 75 | 172 | 200 | 308 | 3.62e-11 | 62.0 |
MS.gene77185.t1 | AT4G32600 | 37.500 | 56 | 35 | 0 | 107 | 162 | 362 | 417 | 7.92e-11 | 61.6 |
MS.gene77185.t1 | AT4G32600 | 37.500 | 56 | 35 | 0 | 107 | 162 | 362 | 417 | 7.92e-11 | 61.6 |
Find 61 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCTTCATTCTAATGATTC+TGG | 0.212324 | 2.4:+31683282 | MS.gene77185:CDS |
ATGAAGAATCGGCGTCGTTT+TGG | 0.271107 | 2.4:-31682834 | None:intergenic |
TACTGTAGGGATTGTTGTTT+CGG | 0.304144 | 2.4:-31682920 | None:intergenic |
GAGCTTCTTGTCCTCTTTGT+CGG | 0.339530 | 2.4:+31683100 | MS.gene77185:CDS |
GATGAGGAAGATGATGTTAA+TGG | 0.351942 | 2.4:+31683156 | MS.gene77185:CDS |
GGCGGTGGTGGTGGTGTAGA+TGG | 0.381074 | 2.4:+31683342 | MS.gene77185:CDS |
ATTGTATTACTCCGTGGCTT+CGG | 0.399609 | 2.4:+31683073 | MS.gene77185:CDS |
GGGGCAGAGCAGAGGAGAGG+GGG | 0.405791 | 2.4:-31682767 | None:intergenic |
AGTGAACTTGGCGGCGGTGG+TGG | 0.415179 | 2.4:+31683330 | MS.gene77185:CDS |
CACTCATTTCCTCGAACTCA+TGG | 0.435907 | 2.4:+31682798 | MS.gene77185:CDS |
GAACTTGGCGGCGGTGGTGG+TGG | 0.437033 | 2.4:+31683333 | MS.gene77185:CDS |
CATTCTAATGATTCTGGTGG+TGG | 0.447523 | 2.4:+31683288 | MS.gene77185:CDS |
AGGGATTGTTGTTTCGGTGC+GGG | 0.459559 | 2.4:-31682914 | None:intergenic |
GCCGTTTGAGGGATCGAGTA+AGG | 0.460625 | 2.4:-31682965 | None:intergenic |
ACCTTACTCGATCCCTCAAA+CGG | 0.473396 | 2.4:+31682964 | MS.gene77185:CDS |
GCTAGTGAACTTGGCGGCGG+TGG | 0.473653 | 2.4:+31683327 | MS.gene77185:CDS |
GCATATAACGACGCCGTTTG+AGG | 0.475721 | 2.4:-31682977 | None:intergenic |
GTTTCGGTGCGGGATTTAGC+GGG | 0.479527 | 2.4:-31682904 | None:intergenic |
TCTTTGTCGGTGCGGAATTG+TGG | 0.480140 | 2.4:+31683113 | MS.gene77185:CDS |
GGAAACCGTTTCTTTACAAA+CGG | 0.482757 | 2.4:-31683001 | None:intergenic |
CATCATGACGACGGCGATCT+CGG | 0.488367 | 2.4:+31682672 | None:intergenic |
GAGGAAATGAGTGTCGCAAT+GGG | 0.490955 | 2.4:-31682788 | None:intergenic |
CATATAACGACGCCGTTTGA+GGG | 0.500879 | 2.4:-31682976 | None:intergenic |
CTGTTTCGCTTCCTCGTCAA+CGG | 0.504931 | 2.4:-31683022 | None:intergenic |
ATGCGCCGTTTGTAAAGAAA+CGG | 0.509933 | 2.4:+31682996 | MS.gene77185:CDS |
GTCGAAGAAAGATGAAGAAT+CGG | 0.511489 | 2.4:-31682845 | None:intergenic |
AGTGATGATGCTAGTGAACT+TGG | 0.519447 | 2.4:+31683318 | MS.gene77185:CDS |
GGAGATGGTGATGCGCTTGT+CGG | 0.522674 | 2.4:+31683194 | MS.gene77185:CDS |
TTTGTGTGACGGTTACTGTA+GGG | 0.534278 | 2.4:-31682933 | None:intergenic |
CGAGGAAATGAGTGTCGCAA+TGG | 0.542113 | 2.4:-31682789 | None:intergenic |
TGTTTCGGTGCGGGATTTAG+CGG | 0.546426 | 2.4:-31682905 | None:intergenic |
AAACACTCATGTCACATTCG+TGG | 0.553171 | 2.4:-31682726 | None:intergenic |
TGAGTAGTAAAAGCGCGTCT+TGG | 0.555119 | 2.4:-31682876 | None:intergenic |
TTGTGATCATCTTTATCATG+CGG | 0.559253 | 2.4:+31683050 | MS.gene77185:CDS |
GACGACGGCGATCTCGGTGG+CGG | 0.559700 | 2.4:+31682678 | MS.gene77185:CDS |
AAGGTGAGTCCATGAGTTCG+AGG | 0.564015 | 2.4:-31682807 | None:intergenic |
GGTAAGAAGCGTTTGTGTGA+CGG | 0.566304 | 2.4:-31682944 | None:intergenic |
CGGAATTGTGGAGGATGAAG+AGG | 0.572347 | 2.4:+31683125 | MS.gene77185:CDS |
GTTTGTGTGACGGTTACTGT+AGG | 0.576938 | 2.4:-31682934 | None:intergenic |
ACAATTCCGCACCGACAAAG+AGG | 0.599284 | 2.4:-31683111 | None:intergenic |
GAGGAAGATGATGTTAATGG+TGG | 0.599878 | 2.4:+31683159 | MS.gene77185:CDS |
TAGGGATTGTTGTTTCGGTG+CGG | 0.602770 | 2.4:-31682915 | None:intergenic |
GGAAATGAGTGTCGCAATGG+GGG | 0.611322 | 2.4:-31682786 | None:intergenic |
TGAAGAGGATGTGAATGATG+AGG | 0.616785 | 2.4:+31683140 | MS.gene77185:CDS |
CTTCATTCTAATGATTCTGG+TGG | 0.625157 | 2.4:+31683285 | MS.gene77185:CDS |
GAAGCTCGAATCCGAAGCCA+CGG | 0.626516 | 2.4:-31683084 | None:intergenic |
TTGTCGGTGCGGAATTGTGG+AGG | 0.626660 | 2.4:+31683116 | MS.gene77185:CDS |
TCTTGTCCTCTTTGTCGGTG+CGG | 0.626689 | 2.4:+31683105 | MS.gene77185:CDS |
GATGATGCTAGTGAACTTGG+CGG | 0.626692 | 2.4:+31683321 | MS.gene77185:CDS |
TCGGTGCGGGATTTAGCGGG+AGG | 0.626805 | 2.4:-31682901 | None:intergenic |
TAATGGTGGAGATGTGATGA+GGG | 0.627088 | 2.4:+31683173 | MS.gene77185:CDS |
AGAAACGGTTTCCGTTGACG+AGG | 0.647530 | 2.4:+31683011 | MS.gene77185:CDS |
GATGCTAGTGAACTTGGCGG+CGG | 0.650900 | 2.4:+31683324 | MS.gene77185:CDS |
GCGCTTGTCGGAGTTGTCTG+AGG | 0.656779 | 2.4:+31683206 | MS.gene77185:CDS |
TGGAGATGTGATGAGGGAGA+TGG | 0.658931 | 2.4:+31683179 | MS.gene77185:CDS |
ATGCGGATTGTATTACTCCG+TGG | 0.659920 | 2.4:+31683067 | MS.gene77185:CDS |
ACCGCCCACCATCATGACGA+CGG | 0.675695 | 2.4:+31682663 | None:intergenic |
TTAATGGTGGAGATGTGATG+AGG | 0.684637 | 2.4:+31683172 | MS.gene77185:CDS |
GCATGATAAAGATGATCACA+AGG | 0.688727 | 2.4:-31683048 | None:intergenic |
AGGAAATGAGTGTCGCAATG+GGG | 0.690747 | 2.4:-31682787 | None:intergenic |
CATGACGACGGCGATCTCGG+TGG | 0.703855 | 2.4:+31682675 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
TTGTGATCATCTTTATCATG+CGG | + | chr2.4:31683050-31683069 | MS.gene77185:CDS | 30.0% | |
! | TTGTCTGAGGATGATTTTTA+TGG | + | chr2.4:31683219-31683238 | MS.gene77185:CDS | 30.0% |
!! | AGGATGATTTTTATGGATTG+AGG | + | chr2.4:31683226-31683245 | MS.gene77185:CDS | 30.0% |
AACCCGAACTAAAAACATAC+TGG | + | chr2.4:31682701-31682720 | MS.gene77185:CDS | 35.0% | |
CTGCTTCATTCTAATGATTC+TGG | + | chr2.4:31683282-31683301 | MS.gene77185:CDS | 35.0% | |
CTTCATTCTAATGATTCTGG+TGG | + | chr2.4:31683285-31683304 | MS.gene77185:CDS | 35.0% | |
GATGAGGAAGATGATGTTAA+TGG | + | chr2.4:31683156-31683175 | MS.gene77185:CDS | 35.0% | |
GCATGATAAAGATGATCACA+AGG | - | chr2.4:31683051-31683070 | None:intergenic | 35.0% | |
GGAAACCGTTTCTTTACAAA+CGG | - | chr2.4:31683004-31683023 | None:intergenic | 35.0% | |
GTCGAAGAAAGATGAAGAAT+CGG | - | chr2.4:31682848-31682867 | None:intergenic | 35.0% | |
!! | TACTGTAGGGATTGTTGTTT+CGG | - | chr2.4:31682923-31682942 | None:intergenic | 35.0% |
!!! | CACCAGTATGTTTTTAGTTC+GGG | - | chr2.4:31682706-31682725 | None:intergenic | 35.0% |
!!! | GCACCAGTATGTTTTTAGTT+CGG | - | chr2.4:31682707-31682726 | None:intergenic | 35.0% |
AAACACTCATGTCACATTCG+TGG | - | chr2.4:31682729-31682748 | None:intergenic | 40.0% | |
ATGCGCCGTTTGTAAAGAAA+CGG | + | chr2.4:31682996-31683015 | MS.gene77185:CDS | 40.0% | |
ATTGTATTACTCCGTGGCTT+CGG | + | chr2.4:31683073-31683092 | MS.gene77185:CDS | 40.0% | |
CATTCTAATGATTCTGGTGG+TGG | + | chr2.4:31683288-31683307 | MS.gene77185:CDS | 40.0% | |
GAGGAAGATGATGTTAATGG+TGG | + | chr2.4:31683159-31683178 | MS.gene77185:CDS | 40.0% | |
TGAAGAGGATGTGAATGATG+AGG | + | chr2.4:31683140-31683159 | MS.gene77185:CDS | 40.0% | |
TTTGTGTGACGGTTACTGTA+GGG | - | chr2.4:31682936-31682955 | None:intergenic | 40.0% | |
! | AGTGATGATGCTAGTGAACT+TGG | + | chr2.4:31683318-31683337 | MS.gene77185:CDS | 40.0% |
! | TAATGGTGGAGATGTGATGA+GGG | + | chr2.4:31683173-31683192 | MS.gene77185:CDS | 40.0% |
! | TTAATGGTGGAGATGTGATG+AGG | + | chr2.4:31683172-31683191 | MS.gene77185:CDS | 40.0% |
ACCTTACTCGATCCCTCAAA+CGG | + | chr2.4:31682964-31682983 | MS.gene77185:CDS | 45.0% | |
CACTCATTTCCTCGAACTCA+TGG | + | chr2.4:31682798-31682817 | MS.gene77185:CDS | 45.0% | |
CATATAACGACGCCGTTTGA+GGG | - | chr2.4:31682979-31682998 | None:intergenic | 45.0% | |
GAGCTTCTTGTCCTCTTTGT+CGG | + | chr2.4:31683100-31683119 | MS.gene77185:CDS | 45.0% | |
GATGATGCTAGTGAACTTGG+CGG | + | chr2.4:31683321-31683340 | MS.gene77185:CDS | 45.0% | |
GTTTGTGTGACGGTTACTGT+AGG | - | chr2.4:31682937-31682956 | None:intergenic | 45.0% | |
! | AGGAAATGAGTGTCGCAATG+GGG | - | chr2.4:31682790-31682809 | None:intergenic | 45.0% |
! | ATGAAGAATCGGCGTCGTTT+TGG | - | chr2.4:31682837-31682856 | None:intergenic | 45.0% |
! | ATGCGGATTGTATTACTCCG+TGG | + | chr2.4:31683067-31683086 | MS.gene77185:CDS | 45.0% |
! | GAGGAAATGAGTGTCGCAAT+GGG | - | chr2.4:31682791-31682810 | None:intergenic | 45.0% |
! | TGAGTAGTAAAAGCGCGTCT+TGG | - | chr2.4:31682879-31682898 | None:intergenic | 45.0% |
!! | GGTAAGAAGCGTTTGTGTGA+CGG | - | chr2.4:31682947-31682966 | None:intergenic | 45.0% |
!! | TAGGGATTGTTGTTTCGGTG+CGG | - | chr2.4:31682918-31682937 | None:intergenic | 45.0% |
!! | TGAAGAATCGGCGTCGTTTT+GGG | - | chr2.4:31682836-31682855 | None:intergenic | 45.0% |
AAGGTGAGTCCATGAGTTCG+AGG | - | chr2.4:31682810-31682829 | None:intergenic | 50.0% | |
AGAAACGGTTTCCGTTGACG+AGG | + | chr2.4:31683011-31683030 | MS.gene77185:CDS | 50.0% | |
CGGAATTGTGGAGGATGAAG+AGG | + | chr2.4:31683125-31683144 | MS.gene77185:CDS | 50.0% | |
CTGTTTCGCTTCCTCGTCAA+CGG | - | chr2.4:31683025-31683044 | None:intergenic | 50.0% | |
GCATATAACGACGCCGTTTG+AGG | - | chr2.4:31682980-31682999 | None:intergenic | 50.0% | |
TCTTGTCCTCTTTGTCGGTG+CGG | + | chr2.4:31683105-31683124 | MS.gene77185:CDS | 50.0% | |
TCTTTGTCGGTGCGGAATTG+TGG | + | chr2.4:31683113-31683132 | MS.gene77185:CDS | 50.0% | |
TGGAGATGTGATGAGGGAGA+TGG | + | chr2.4:31683179-31683198 | MS.gene77185:CDS | 50.0% | |
! | ACAATTCCGCACCGACAAAG+AGG | - | chr2.4:31683114-31683133 | None:intergenic | 50.0% |
! | CGAGGAAATGAGTGTCGCAA+TGG | - | chr2.4:31682792-31682811 | None:intergenic | 50.0% |
! | GGAAATGAGTGTCGCAATGG+GGG | - | chr2.4:31682789-31682808 | None:intergenic | 50.0% |
! | TGTTTCGGTGCGGGATTTAG+CGG | - | chr2.4:31682908-31682927 | None:intergenic | 50.0% |
!! | AGGGATTGTTGTTTCGGTGC+GGG | - | chr2.4:31682917-31682936 | None:intergenic | 50.0% |
!!! | TCGGCGTCGTTTTGGGAAAA+AGG | - | chr2.4:31682829-31682848 | None:intergenic | 50.0% |
GAAGCTCGAATCCGAAGCCA+CGG | - | chr2.4:31683087-31683106 | None:intergenic | 55.0% | |
GATGCTAGTGAACTTGGCGG+CGG | + | chr2.4:31683324-31683343 | MS.gene77185:CDS | 55.0% | |
GCCGTTTGAGGGATCGAGTA+AGG | - | chr2.4:31682968-31682987 | None:intergenic | 55.0% | |
TTGTCGGTGCGGAATTGTGG+AGG | + | chr2.4:31683116-31683135 | MS.gene77185:CDS | 55.0% | |
! | GGAGATGGTGATGCGCTTGT+CGG | + | chr2.4:31683194-31683213 | MS.gene77185:CDS | 55.0% |
! | GTTTCGGTGCGGGATTTAGC+GGG | - | chr2.4:31682907-31682926 | None:intergenic | 55.0% |
GCGCTTGTCGGAGTTGTCTG+AGG | + | chr2.4:31683206-31683225 | MS.gene77185:CDS | 60.0% | |
AGTGAACTTGGCGGCGGTGG+TGG | + | chr2.4:31683330-31683349 | MS.gene77185:CDS | 65.0% | |
ATGGGGGCAGAGCAGAGGAG+AGG | - | chr2.4:31682773-31682792 | None:intergenic | 65.0% | |
GCTAGTGAACTTGGCGGCGG+TGG | + | chr2.4:31683327-31683346 | MS.gene77185:CDS | 65.0% | |
TCGCAATGGGGGCAGAGCAG+AGG | - | chr2.4:31682778-31682797 | None:intergenic | 65.0% | |
TCGGTGCGGGATTTAGCGGG+AGG | - | chr2.4:31682904-31682923 | None:intergenic | 65.0% | |
TGGGGGCAGAGCAGAGGAGA+GGG | - | chr2.4:31682772-31682791 | None:intergenic | 65.0% | |
!! | GGCGGTGGTGGTGGTGTAGA+TGG | + | chr2.4:31683342-31683361 | MS.gene77185:CDS | 65.0% |
GACGACGGCGATCTCGGTGG+CGG | + | chr2.4:31682678-31682697 | MS.gene77185:CDS | 70.0% | |
GGGGCAGAGCAGAGGAGAGG+GGG | - | chr2.4:31682770-31682789 | None:intergenic | 70.0% | |
GGGGGCAGAGCAGAGGAGAG+GGG | - | chr2.4:31682771-31682790 | None:intergenic | 70.0% | |
! | GAACTTGGCGGCGGTGGTGG+TGG | + | chr2.4:31683333-31683352 | MS.gene77185:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 31682676 | 31683377 | 31682676 | ID=MS.gene77185 |
chr2.4 | mRNA | 31682676 | 31683377 | 31682676 | ID=MS.gene77185.t1;Parent=MS.gene77185 |
chr2.4 | exon | 31682676 | 31683377 | 31682676 | ID=MS.gene77185.t1.exon1;Parent=MS.gene77185.t1 |
chr2.4 | CDS | 31682676 | 31683377 | 31682676 | ID=cds.MS.gene77185.t1;Parent=MS.gene77185.t1 |
Gene Sequence |
Protein sequence |