AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78386

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78386.t1 MTR_2g097020 87.059 680 42 7 1 647 1 667 0.0 1137
MS.gene78386.t1 MTR_2g095400 81.498 654 97 5 1 647 1 637 0.0 1002
MS.gene78386.t1 MTR_2g097010 77.467 679 120 3 1 647 1 678 0.0 959
MS.gene78386.t1 MTR_4g046643 76.133 662 119 5 1 631 1 654 0.0 945
MS.gene78386.t1 MTR_2g097000 75.128 390 79 3 274 647 2 389 0.0 538
MS.gene78386.t1 MTR_3g067815 39.171 651 351 12 10 642 13 636 1.33e-143 432
MS.gene78386.t1 MTR_4g126200 74.525 263 51 3 389 647 3 253 2.09e-131 387
MS.gene78386.t1 MTR_5g079940 37.721 623 348 12 32 646 530 1120 1.36e-125 399
MS.gene78386.t1 MTR_4g006760 38.752 529 287 9 115 635 115 614 6.04e-109 342
MS.gene78386.t1 MTR_4g125920 39.736 531 282 12 115 635 116 618 2.47e-107 338
MS.gene78386.t1 MTR_4g131350 39.299 542 291 12 115 646 169 682 1.01e-106 338
MS.gene78386.t1 MTR_4g126180 77.391 115 26 0 275 389 3 117 2.57e-49 168
MS.gene78386.t1 MTR_3g067855 44.545 220 106 4 416 634 123 327 9.02e-48 172
MS.gene78386.t1 MTR_3g067845 35.821 268 153 5 381 646 1 251 3.22e-36 137
MS.gene78386.t1 MTR_4g131310 28.797 316 186 7 125 433 104 387 6.59e-26 111
MS.gene78386.t1 MTR_4g131310 59.375 64 26 0 572 635 391 454 7.80e-18 87.0
MS.gene78386.t1 MTR_3g067825 45.783 83 41 1 556 634 10 92 2.86e-16 75.9
MS.gene78386.t1 MTR_8g446460 40.741 135 47 3 9 112 107 239 3.33e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78386.t1 AT1G13790 46.468 538 266 7 105 638 207 726 5.26e-144 436
MS.gene78386.t1 AT1G13790 46.468 538 266 7 105 638 207 726 5.26e-144 436
MS.gene78386.t1 AT3G12550 38.333 540 303 6 108 638 111 629 1.29e-112 352
MS.gene78386.t1 AT3G12550 38.262 541 303 7 108 638 111 630 7.04e-111 347
MS.gene78386.t1 AT3G12550 38.262 541 303 7 108 638 111 630 7.04e-111 347
MS.gene78386.t1 AT3G12550 38.262 541 303 7 108 638 111 630 7.04e-111 347
MS.gene78386.t1 AT3G48670 38.113 551 311 9 106 646 115 645 7.26e-111 348
MS.gene78386.t1 AT3G48670 38.113 551 311 9 106 646 115 645 7.26e-111 348
MS.gene78386.t1 AT3G48670 38.113 551 311 9 106 646 115 645 7.26e-111 348
MS.gene78386.t1 AT5G59390 36.563 547 308 10 105 636 17 539 1.08e-104 329
MS.gene78386.t1 AT5G59390 36.563 547 308 10 105 636 17 539 1.08e-104 329
MS.gene78386.t1 AT5G59390 36.563 547 308 10 105 636 17 539 1.08e-104 329
MS.gene78386.t1 AT1G15910 36.976 549 297 10 116 646 117 634 1.42e-103 328
MS.gene78386.t1 AT5G59390 36.232 552 308 11 105 636 17 544 2.08e-102 323
MS.gene78386.t1 AT5G59390 36.232 552 308 11 105 636 17 544 2.08e-102 323
MS.gene78386.t1 AT4G00380 36.313 537 293 9 116 634 90 595 1.04e-100 320
MS.gene78386.t1 AT4G00380 36.313 537 293 9 116 634 118 623 1.54e-100 320
MS.gene78386.t1 AT4G00380 36.313 537 293 9 116 634 118 623 1.54e-100 320
MS.gene78386.t1 AT4G01180 36.280 543 298 10 112 636 27 539 8.98e-97 308
MS.gene78386.t1 AT1G80790 36.314 548 306 8 114 646 115 634 8.22e-90 292
MS.gene78386.t1 AT1G80790 36.314 548 306 8 114 646 115 634 8.22e-90 292
MS.gene78386.t1 AT3G12550 35.560 464 269 6 108 562 111 553 8.53e-80 264
MS.gene78386.t1 AT4G01780 32.688 465 206 12 184 646 111 470 1.35e-56 199
MS.gene78386.t1 AT1G80790 31.343 335 201 5 114 433 115 435 1.91e-43 163
MS.gene78386.t1 AT3G29375 41.429 210 101 5 437 645 38 226 2.94e-41 150
MS.gene78386.t1 AT3G29375 41.429 210 101 5 437 645 161 349 6.67e-39 147
MS.gene78386.t1 AT3G29375 36.508 126 61 3 437 562 38 144 1.39e-14 72.8
MS.gene78386.t1 AT2G16490 40.000 65 39 0 571 635 74 138 7.27e-12 65.1

Find 154 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTCCATTGCTTAATTAAA+TGG 0.074937 2.3:-5228656 None:intergenic
TTCCTCGGTCTTCAGCTTTA+AGG 0.140650 2.3:-5225992 None:intergenic
GGGGATTTGAAAACTGTTTC+TGG 0.144259 2.3:+5225913 MS.gene78386:CDS
CCCTTTGCAGTTGTTCAATT+TGG 0.168840 2.3:+5225706 MS.gene78386:CDS
ACTTGATATTAAGCCATTTC+TGG 0.206556 2.3:+5228009 MS.gene78386:CDS
TAAGCAATGGAGATTAAATA+AGG 0.245029 2.3:+5228665 MS.gene78386:CDS
ATGACTCGAGCAGTGTTCTT+TGG 0.279903 2.3:-5227962 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.283852 2.3:+5226086 MS.gene78386:CDS
GAGGGATTACTTGGCTTTAC+GGG 0.324290 2.3:+5225798 MS.gene78386:CDS
TCAACAAACGCTGGTTGTTC+AGG 0.326781 2.3:+5227183 MS.gene78386:CDS
GAGCGGGGAGATAGACTCTT+TGG 0.328386 2.3:+5225826 MS.gene78386:CDS
CCTTGTAGTAATCATCCTTC+AGG 0.329123 2.3:-5225184 None:intergenic
TCCCTAAAATTCCAGAGTTC+TGG 0.333058 2.3:-5228600 None:intergenic
GGAAAAGGAAGAGGAATTAG+AGG 0.338238 2.3:+5227147 MS.gene78386:CDS
ACGGCTGAAAGGAGCTTTCC+AGG 0.341751 2.3:+5227054 MS.gene78386:CDS
AATTCCAGAGTTCTGGTATT+GGG 0.344766 2.3:-5228593 None:intergenic
TTTGATCCATCGCTTTCCTT+AGG 0.347229 2.3:-5226056 None:intergenic
GGCTTTACGGGAGCAGGAGC+GGG 0.350376 2.3:+5225810 MS.gene78386:CDS
GAATGATGCTGAGGGTCATT+TGG 0.358140 2.3:+5225486 MS.gene78386:CDS
GGCAAACACCTCCAGGGAAA+TGG 0.364188 2.3:+5225892 MS.gene78386:CDS
ACTGCCCTGTGGAACTTTAG+AGG 0.368266 2.3:+5225676 MS.gene78386:CDS
TGCTAAACAAGCATTGGAAT+TGG 0.371434 2.3:+5227024 MS.gene78386:CDS
GGTCTTCAGCTTTAAGGTAT+TGG 0.374345 2.3:-5225986 None:intergenic
AGAGGGATTACTTGGCTTTA+CGG 0.374808 2.3:+5225797 MS.gene78386:CDS
ATGCTTGAACATTTCAATAA+GGG 0.377132 2.3:+5226087 MS.gene78386:CDS
AAAGCTGAAGACCGAGGAAT+TGG 0.379202 2.3:+5225996 MS.gene78386:CDS
TCTCCATTGCTTAATTAAAT+GGG 0.381737 2.3:-5228655 None:intergenic
AAAAGTCTGAAGGATGAATT+CGG 0.386946 2.3:+5228501 MS.gene78386:CDS
ACAAGCTCGTGAGTCTGATT+TGG 0.387571 2.3:+5225133 MS.gene78386:CDS
TGACTCGAGCAGTGTTCTTT+GGG 0.389447 2.3:-5227961 None:intergenic
GCAAACACCTCCAGGGAAAT+GGG 0.392632 2.3:+5225893 MS.gene78386:CDS
CACAGGGCAGTAACTTTCAA+TGG 0.399272 2.3:-5225664 None:intergenic
CTCCAATGTGATTCATTACC+TGG 0.402190 2.3:-5227072 None:intergenic
GGGATTTGAAAACTGTTTCT+GGG 0.403525 2.3:+5225914 MS.gene78386:CDS
AAAGTCTGAAGGATGAATTC+GGG 0.404355 2.3:+5228502 MS.gene78386:CDS
TGCAGTAGCTACAGCTTTGA+AGG 0.409104 2.3:+5228539 MS.gene78386:CDS
GGAAGAGGAATTAGAGGGTG+TGG 0.409930 2.3:+5227153 MS.gene78386:CDS
TTGATCCATCGCTTTCCTTA+GGG 0.410024 2.3:-5226055 None:intergenic
CTGTGGTAAGAGGGATTACT+TGG 0.417597 2.3:+5225789 MS.gene78386:CDS
TCACATTGGAGAGACTGATA+TGG 0.420018 2.3:+5227084 MS.gene78386:CDS
GAGGAAGCTTCTCTCTGGTT+TGG 0.422362 2.3:+5225963 MS.gene78386:CDS
TATAATTTCAAAGATATAGT+TGG 0.424336 2.3:+5225871 MS.gene78386:CDS
GGAAAGAAGCTGAGGACAAC+AGG 0.427648 2.3:+5225935 MS.gene78386:CDS
ATACCAGGAGAAAGTATCTA+AGG 0.429355 2.3:+5226352 MS.gene78386:CDS
TTACTTGGCTTTACGGGAGC+AGG 0.431347 2.3:+5225804 MS.gene78386:CDS
AAATTCCAGAGTTCTGGTAT+TGG 0.455619 2.3:-5228594 None:intergenic
TTTACTTGTGCACAGTGGAT+TGG 0.457461 2.3:+5227935 MS.gene78386:intron
AAGCAATGGAGATTAAATAA+GGG 0.458758 2.3:+5228666 MS.gene78386:CDS
AATGATGCTGAGGGTCATTT+GGG 0.461869 2.3:+5225487 MS.gene78386:CDS
TATAGTTGGCAAACACCTCC+AGG 0.464223 2.3:+5225885 MS.gene78386:CDS
TTTCTTCTCAAAATATAGCT+TGG 0.468603 2.3:-5226477 None:intergenic
CAGAATGGAGCTCCAGGAAA+AGG 0.470520 2.3:+5227132 MS.gene78386:CDS
GGATCATGAAAAGGCCAGGC+TGG 0.471261 2.3:+5226373 MS.gene78386:CDS
GTCTTTGGCTGAAGAACATA+AGG 0.472836 2.3:+5226857 MS.gene78386:CDS
AGCAATCAGAATGGAGCTCC+AGG 0.475262 2.3:+5227126 MS.gene78386:CDS
AAGCAGAGCACTGTGGTAAG+AGG 0.475875 2.3:+5225779 MS.gene78386:CDS
TAGTACTGTTAATGATAAGT+TGG 0.478298 2.3:+5225426 MS.gene78386:CDS
AGGAGGAGCTGATCATGAAC+GGG 0.480433 2.3:+5225635 MS.gene78386:CDS
TGGCTTTACGGGAGCAGGAG+CGG 0.481924 2.3:+5225809 MS.gene78386:CDS
AAAGCGAGGAAGCTTCTCTC+TGG 0.485446 2.3:+5225958 MS.gene78386:CDS
CATAATTTCTGTGAAAAGGA+TGG 0.486804 2.3:+5227982 MS.gene78386:CDS
AGATAGACTCTTTGGGTGGA+TGG 0.488205 2.3:+5225834 MS.gene78386:CDS
AGCTGTCTGCTCCAATTCCT+CGG 0.490587 2.3:-5226007 None:intergenic
AAGGAAAGCGATGGATCAAA+AGG 0.493646 2.3:+5226059 MS.gene78386:CDS
AGTATCTAAGGATCATGAAA+AGG 0.500223 2.3:+5226364 MS.gene78386:CDS
TTTGTCCTCTAAAGTTCCAC+AGG 0.503452 2.3:-5225681 None:intergenic
AGCGGGGAGATAGACTCTTT+GGG 0.503541 2.3:+5225827 MS.gene78386:CDS
AAAGTTGTAACTGACAAAGA+AGG 0.506666 2.3:+5228175 MS.gene78386:CDS
CCAAATTGAACAACTGCAAA+GGG 0.510429 2.3:-5225706 None:intergenic
GCAGGTTGAACGCGAATACC+AGG 0.511335 2.3:+5226337 MS.gene78386:CDS
ACTTGATGCTAAACAAGCAT+TGG 0.512094 2.3:+5227018 MS.gene78386:CDS
GAGTCATAATTTCTGTGAAA+AGG 0.512368 2.3:+5227978 MS.gene78386:CDS
ATGAGTTGTTTGTATGGCCA+TGG 0.517649 2.3:+5225533 MS.gene78386:CDS
ATGATGATGAGTTGTTTGTA+TGG 0.517675 2.3:+5225527 MS.gene78386:CDS
CCGAGCTTCTAGTTCCAGCC+TGG 0.518163 2.3:-5226387 None:intergenic
ACAGGGCAGTAACTTTCAAT+GGG 0.518654 2.3:-5225663 None:intergenic
TTGTCAGTTACAACTTTGAA+CGG 0.521069 2.3:-5228169 None:intergenic
TGTTGCTAAGCATTCAGCTC+TGG 0.522198 2.3:+5225333 MS.gene78386:CDS
CGAACTTATTTCCCGTGAGA+AGG 0.523382 2.3:+5226415 MS.gene78386:CDS
GGTATTGGGTACCTACCACT+AGG 0.523917 2.3:-5228579 None:intergenic
ATGAGAAAGCAGTAACTAAG+AGG 0.527243 2.3:+5228065 MS.gene78386:CDS
TAGCATCAAGTCCTCTCTCC+AGG 0.527448 2.3:-5227006 None:intergenic
TCCAAATTGAACAACTGCAA+AGG 0.527752 2.3:-5225707 None:intergenic
AGAGATCAGCATGATGCGGC+AGG 0.535584 2.3:+5226319 MS.gene78386:intron
GGCAATAGAAGAGCAACAAA+AGG 0.535693 2.3:+5226818 MS.gene78386:CDS
TGTTCAATTTGGAAGAGAGT+GGG 0.538931 2.3:+5225717 MS.gene78386:CDS
AGGAAGGAAGGCTTCATTGA+AGG 0.541212 2.3:+5228623 MS.gene78386:CDS
GCTTTACGGGAGCAGGAGCG+GGG 0.541512 2.3:+5225811 MS.gene78386:CDS
TTTCCCATTTAATTAAGCAA+TGG 0.544377 2.3:+5228652 MS.gene78386:CDS
TTGTTCAATTTGGAAGAGAG+TGG 0.547384 2.3:+5225716 MS.gene78386:CDS
GATCCTTAGATACTTTCTCC+TGG 0.553646 2.3:-5226355 None:intergenic
GAAGGATGAATTCGGGGATG+AGG 0.554266 2.3:+5228509 MS.gene78386:CDS
CTAAGGATCATGAAAAGGCC+AGG 0.555820 2.3:+5226369 MS.gene78386:CDS
AAAGTGGGATGACTGTGTTA+AGG 0.558569 2.3:+5228132 MS.gene78386:CDS
AAAATTGGAAGCAATCAGAA+TGG 0.559788 2.3:+5227117 MS.gene78386:CDS
CCTGAAGGATGATTACTACA+AGG 0.560609 2.3:+5225184 MS.gene78386:CDS
AGCAGAGCACTGTGGTAAGA+GGG 0.561293 2.3:+5225780 MS.gene78386:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.567235 2.3:+5227983 MS.gene78386:CDS
TCAAATCCCCATTTCCCTGG+AGG 0.569890 2.3:-5225900 None:intergenic
AAGGAGGAGCTGATCATGAA+CGG 0.571820 2.3:+5225634 MS.gene78386:CDS
ACTTTGAACGGATGCCAGCT+AGG 0.575128 2.3:-5228157 None:intergenic
GGAGCTCCAGGAAAAGGAAG+AGG 0.576364 2.3:+5227138 MS.gene78386:CDS
AAGGGAAAGAAAGCTTATTG+AGG 0.581176 2.3:+5228684 MS.gene78386:CDS
CAATTTGGAAGAGAGTGGGA+TGG 0.581803 2.3:+5225721 MS.gene78386:CDS
GGTACCCAATACCAGAACTC+TGG 0.581859 2.3:+5228589 MS.gene78386:CDS
CCATCGAGTGGTGCTCAAAG+TGG 0.590121 2.3:+5228116 MS.gene78386:CDS
AAAATTCATGACCTGGAGAG+AGG 0.591924 2.3:+5226995 MS.gene78386:CDS
CCACTTTGAGCACCACTCGA+TGG 0.592499 2.3:-5228116 None:intergenic
CATCGAGTGGTGCTCAAAGT+GGG 0.594921 2.3:+5228117 MS.gene78386:CDS
CATTGGAATTGGAGATAGAA+CGG 0.595258 2.3:+5227035 MS.gene78386:CDS
GTATTGGGTACCTACCACTA+GGG 0.598398 2.3:-5228578 None:intergenic
GCAAAACGGACAGCGAAACG+TGG 0.601097 2.3:-5225228 None:intergenic
ACTTATTATGAATGATGCTG+AGG 0.601843 2.3:+5225477 MS.gene78386:CDS
TTCCAGGTAATGAATCACAT+TGG 0.602846 2.3:+5227070 MS.gene78386:CDS
TTGGAGATAGAACGGCTGAA+AGG 0.603749 2.3:+5227043 MS.gene78386:CDS
CTGAGGACAACAGGAAAGCG+AGG 0.605417 2.3:+5225944 MS.gene78386:CDS
AAGTTGTAACTGACAAAGAA+GGG 0.606382 2.3:+5228176 MS.gene78386:CDS
TCACAAGAAAATTCATGACC+TGG 0.607531 2.3:+5226988 MS.gene78386:CDS
GCTTCTGCAGATCCTTCTCA+CGG 0.608508 2.3:-5226427 None:intergenic
CCAGGCTGGAACTAGAAGCT+CGG 0.611703 2.3:+5226387 MS.gene78386:CDS
GACAGCTAGCAAGTATGATG+AGG 0.612521 2.3:+5226023 MS.gene78386:CDS
TGAGAAAGCAGTAACTAAGA+GGG 0.613750 2.3:+5228066 MS.gene78386:CDS
ACTGTGTTAAGGATCCTAGC+TGG 0.617328 2.3:+5228143 MS.gene78386:CDS
TAGATATTATGAAGACCTGA+AGG 0.618566 2.3:+5225169 MS.gene78386:CDS
GTTGTTTGTATGGCCATGGA+TGG 0.618975 2.3:+5225537 MS.gene78386:CDS
ATGAGGTGAATGTGTCCCTA+AGG 0.619227 2.3:+5226040 MS.gene78386:CDS
TGTGTCCCTAAGGAAAGCGA+TGG 0.619461 2.3:+5226050 MS.gene78386:CDS
CTTCTGCAGATCCTTCTCAC+GGG 0.621177 2.3:-5226426 None:intergenic
AGGAAGGCTTCATTGAAGGA+AGG 0.630962 2.3:+5228627 MS.gene78386:CDS
TGTTTCTGGGAAAGAAGCTG+AGG 0.631054 2.3:+5225927 MS.gene78386:CDS
CTTATTATGAATGATGCTGA+GGG 0.632417 2.3:+5225478 MS.gene78386:CDS
TTGTTGTTTACAGAATGAGA+TGG 0.635228 2.3:+5226797 MS.gene78386:intron
TCTCTAACTTCATAGCATTG+TGG 0.639586 2.3:-5225747 None:intergenic
CATTAGAGATCAGCATGATG+CGG 0.643905 2.3:+5226315 MS.gene78386:intron
ATGAGTACAACCCTAGTGGT+AGG 0.644559 2.3:+5228568 MS.gene78386:CDS
CAAACACCTCCAGGGAAATG+GGG 0.645793 2.3:+5225894 MS.gene78386:CDS
TGCAAATGAAAGCCATCGAG+TGG 0.646033 2.3:+5228104 MS.gene78386:CDS
GAAAAGGAAGAGGAATTAGA+GGG 0.651913 2.3:+5227148 MS.gene78386:CDS
ACAATGCTATGAAGTTAGAG+AGG 0.654487 2.3:+5225749 MS.gene78386:CDS
ATAGTTGGCAAACACCTCCA+GGG 0.662157 2.3:+5225886 MS.gene78386:CDS
TACCTTAAAGCTGAAGACCG+AGG 0.663520 2.3:+5225990 MS.gene78386:CDS
ATTAACAGTACTAACACAAG+GGG 0.664737 2.3:-5225416 None:intergenic
TGACAAAGAAGGGAACTCCA+AGG 0.667692 2.3:+5228186 MS.gene78386:CDS
TCATTAACAGTACTAACACA+AGG 0.669021 2.3:-5225418 None:intergenic
CATTGAAAGTTACTGCCCTG+TGG 0.673584 2.3:+5225665 MS.gene78386:CDS
GGAAGATCTTCAACAAACGC+TGG 0.674192 2.3:+5227174 MS.gene78386:CDS
GAAATGTATATTGAAAGCTA+TGG 0.677454 2.3:+5225355 MS.gene78386:CDS
CATTAACAGTACTAACACAA+GGG 0.679846 2.3:-5225417 None:intergenic
TTGTCCTCTAAAGTTCCACA+GGG 0.695033 2.3:-5225680 None:intergenic
GGCTGGAACTAGAAGCTCGG+AGG 0.704210 2.3:+5226390 MS.gene78386:CDS
TTAAATGAGTACAACCCTAG+TGG 0.707957 2.3:+5228564 MS.gene78386:CDS
AAGTCTGAAGGATGAATTCG+GGG 0.715246 2.3:+5228503 MS.gene78386:CDS
GGGGAGATAGACTCTTTGGG+TGG 0.722759 2.3:+5225830 MS.gene78386:CDS
AGCTTTCAAGCAGAGCACTG+TGG 0.771291 2.3:+5225772 MS.gene78386:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTTTTAATATTTCA+TGG + chr2.3:5226267-5226286 MS.gene78386:intron 10.0%
!! AATTAAAAACTGTAGATAAA+AGG - chr2.3:5226898-5226917 None:intergenic 15.0%
!! ATAAGTTATTGAAAAATAAC+AGG - chr2.3:5226754-5226773 None:intergenic 15.0%
!! GAAGAATCATAAAAAAATTA+AGG + chr2.3:5225615-5225634 MS.gene78386:CDS 15.0%
!! TAAGTTATTGAAAAATAACA+GGG - chr2.3:5226753-5226772 None:intergenic 15.0%
!! TATAATTTCAAAGATATAGT+TGG + chr2.3:5225871-5225890 MS.gene78386:CDS 15.0%
!!! ATGTTAATATTAATGTCTTT+TGG + chr2.3:5227280-5227299 MS.gene78386:intron 15.0%
!!! TGAACTGTTTTAATTAATAT+TGG + chr2.3:5226127-5226146 MS.gene78386:intron 15.0%
!!! TTCATAAAGTTTTACATTTT+AGG + chr2.3:5227711-5227730 MS.gene78386:intron 15.0%
!! AGAAACATGTAATATATTTC+TGG + chr2.3:5226495-5226514 MS.gene78386:intron 20.0%
!! ATATTAACATTTATATGCTG+AGG - chr2.3:5227270-5227289 None:intergenic 20.0%
!! CACAAGTAAAAGTAATTAAT+TGG - chr2.3:5227925-5227944 None:intergenic 20.0%
!! GAATCATAAAAAAATTAAGG+AGG + chr2.3:5225618-5225637 MS.gene78386:CDS 20.0%
!! GCTTTCTAATTATTAAGAAA+TGG - chr2.3:5228321-5228340 None:intergenic 20.0%
!! TTCTTAATAATTAGAAAGCA+TGG + chr2.3:5228322-5228341 MS.gene78386:intron 20.0%
!! TTTGTAAGTGATCAATTTAT+AGG + chr2.3:5226622-5226641 MS.gene78386:intron 20.0%
!!! ATGTATATACTTAAGTTTTG+AGG + chr2.3:5226925-5226944 MS.gene78386:intron 20.0%
!!! CTAAATTTGCTTCTTTAAAA+TGG + chr2.3:5226649-5226668 MS.gene78386:intron 20.0%
!!! TACTACTATATCTATCATTT+TGG + chr2.3:5226201-5226220 MS.gene78386:intron 20.0%
!!! TTTACATTTTAGGTGAAAAT+TGG + chr2.3:5227721-5227740 MS.gene78386:intron 20.0%
! AAAACACCGAAAATTTGTAT+TGG - chr2.3:5227562-5227581 None:intergenic 25.0%
! AAGCAATGGAGATTAAATAA+GGG + chr2.3:5228666-5228685 MS.gene78386:CDS 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG + chr2.3:5227983-5228002 MS.gene78386:CDS 25.0%
! ATCTCCATTGCTTAATTAAA+TGG - chr2.3:5228659-5228678 None:intergenic 25.0%
! ATGCTTGAACATTTCAATAA+GGG + chr2.3:5226087-5226106 MS.gene78386:CDS 25.0%
! CAAAACAAACAATGAAATCA+TGG - chr2.3:5227901-5227920 None:intergenic 25.0%
! CAATTCAGTTTCTATAACTA+AGG + chr2.3:5227582-5227601 MS.gene78386:intron 25.0%
! GAAATGTATATTGAAAGCTA+TGG + chr2.3:5225355-5225374 MS.gene78386:CDS 25.0%
! TAAGCAATGGAGATTAAATA+AGG + chr2.3:5228665-5228684 MS.gene78386:CDS 25.0%
! TAGGAGATAAATATATCCAA+AGG - chr2.3:5228284-5228303 None:intergenic 25.0%
! TAGTACTGTTAATGATAAGT+TGG + chr2.3:5225426-5225445 MS.gene78386:CDS 25.0%
! TATGGATGAGAAGAAAAAAT+TGG + chr2.3:5227102-5227121 MS.gene78386:CDS 25.0%
! TATTGAAAAATAACAGGGAT+TGG - chr2.3:5226748-5226767 None:intergenic 25.0%
! TCTCCATTGCTTAATTAAAT+GGG - chr2.3:5228658-5228677 None:intergenic 25.0%
! TGATGAAAAAATGATGTCTT+TGG + chr2.3:5226842-5226861 MS.gene78386:CDS 25.0%
! TTGTTCACATGTATTTACAA+CGG + chr2.3:5227536-5227555 MS.gene78386:intron 25.0%
! TTTCCCATTTAATTAAGCAA+TGG + chr2.3:5228652-5228671 MS.gene78386:CDS 25.0%
! TTTCTTCTCAAAATATAGCT+TGG - chr2.3:5226480-5226499 None:intergenic 25.0%
! TTTGTCATATTGTTTCATAC+TGG + chr2.3:5227801-5227820 MS.gene78386:intron 25.0%
!! AACTAATCTTTTACAAAGTC+AGG + chr2.3:5227352-5227371 MS.gene78386:intron 25.0%
!! ATACAGCTATTAACTTTTTG+CGG - chr2.3:5227240-5227259 None:intergenic 25.0%
!! TAATTAGAAAGCATGGTAAT+TGG + chr2.3:5228329-5228348 MS.gene78386:intron 25.0%
!!! ACTTATTTTGCTTCAAGTTT+AGG - chr2.3:5227849-5227868 None:intergenic 25.0%
!!! GAAATCTTATTTAAGTTGCT+TGG + chr2.3:5227502-5227521 MS.gene78386:intron 25.0%
AAAAGTCTGAAGGATGAATT+CGG + chr2.3:5228501-5228520 MS.gene78386:CDS 30.0%
AAAATTGGAAGCAATCAGAA+TGG + chr2.3:5227117-5227136 MS.gene78386:CDS 30.0%
AAAGTTGTAACTGACAAAGA+AGG + chr2.3:5228175-5228194 MS.gene78386:CDS 30.0%
AAGTTGTAACTGACAAAGAA+GGG + chr2.3:5228176-5228195 MS.gene78386:CDS 30.0%
ACTTATTATGAATGATGCTG+AGG + chr2.3:5225477-5225496 MS.gene78386:CDS 30.0%
ACTTGATATTAAGCCATTTC+TGG + chr2.3:5228009-5228028 MS.gene78386:CDS 30.0%
AGTATCTAAGGATCATGAAA+AGG + chr2.3:5226364-5226383 MS.gene78386:CDS 30.0%
ATCTTATGACGAGAATAACT+TGG + chr2.3:5227627-5227646 MS.gene78386:intron 30.0%
ATTAACAGTACTAACACAAG+GGG - chr2.3:5225419-5225438 None:intergenic 30.0%
ATTTCTGCTTAAGTTTCACA+AGG - chr2.3:5227404-5227423 None:intergenic 30.0%
CATAATTTCTGTGAAAAGGA+TGG + chr2.3:5227982-5228001 MS.gene78386:CDS 30.0%
CATTAACAGTACTAACACAA+GGG - chr2.3:5225420-5225439 None:intergenic 30.0%
CTTATTATGAATGATGCTGA+GGG + chr2.3:5225478-5225497 MS.gene78386:CDS 30.0%
GAGTCATAATTTCTGTGAAA+AGG + chr2.3:5227978-5227997 MS.gene78386:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG + chr2.3:5226086-5226105 MS.gene78386:CDS 30.0%
GTCGAACATATATTAGATCA+TGG - chr2.3:5228440-5228459 None:intergenic 30.0%
TAAAAAGCTGAAAAGTCTGA+AGG + chr2.3:5228491-5228510 MS.gene78386:CDS 30.0%
TAGATATTATGAAGACCTGA+AGG + chr2.3:5225169-5225188 MS.gene78386:CDS 30.0%
TAGGTGAAAATTGGTAGAAT+CGG + chr2.3:5227730-5227749 MS.gene78386:intron 30.0%
TCATTAACAGTACTAACACA+AGG - chr2.3:5225421-5225440 None:intergenic 30.0%
TCTATTTACTGGAAATTTGC+TGG + chr2.3:5228365-5228384 MS.gene78386:intron 30.0%
TGAAACTTAAGCAGAAATGT+AGG + chr2.3:5227406-5227425 MS.gene78386:intron 30.0%
TGATTTGAATGTTTGCAAAC+AGG - chr2.3:5227475-5227494 None:intergenic 30.0%
TTGTCAGTTACAACTTTGAA+CGG - chr2.3:5228172-5228191 None:intergenic 30.0%
TTGTGTAGTGATCTATTTAC+TGG + chr2.3:5228354-5228373 MS.gene78386:intron 30.0%
! ATCACACAGGAAATTTTAGA+CGG + chr2.3:5228462-5228481 MS.gene78386:intron 30.0%
! ATGATGATGAGTTGTTTGTA+TGG + chr2.3:5225527-5225546 MS.gene78386:CDS 30.0%
! CAAAAAGTGGAAAGTATGTT+GGG + chr2.3:5225593-5225612 MS.gene78386:CDS 30.0%
! GTTCTGTTTCTTTGATTTAG+AGG + chr2.3:5226161-5226180 MS.gene78386:intron 30.0%
! TAATCCTTGTTGTAGCAAAA+CGG - chr2.3:5225245-5225264 None:intergenic 30.0%
! TACAGCTATTAACTTTTTGC+GGG - chr2.3:5227239-5227258 None:intergenic 30.0%
!! AATGGAGCACTATATGTTTT+AGG - chr2.3:5228303-5228322 None:intergenic 30.0%
!! CTAACAACACTTTTTGTGAT+TGG - chr2.3:5226676-5226695 None:intergenic 30.0%
!! TTCATACTGGTTCAATCATA+AGG + chr2.3:5227814-5227833 MS.gene78386:intron 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG + chr2.3:5226797-5226816 MS.gene78386:intron 30.0%
!! TTTTTCAAAATCACCATCCA+TGG - chr2.3:5225553-5225572 None:intergenic 30.0%
!!! CAACATACTTTCCACTTTTT+GGG - chr2.3:5225594-5225613 None:intergenic 30.0%
!!! TTAAGTTTTGAGGACTCTTT+TGG + chr2.3:5226935-5226954 MS.gene78386:intron 30.0%
AAAGTCTGAAGGATGAATTC+GGG + chr2.3:5228502-5228521 MS.gene78386:CDS 35.0%
ACAACAAGGATTACTACTCT+TGG + chr2.3:5225252-5225271 MS.gene78386:intron 35.0%
ACAATGCTATGAAGTTAGAG+AGG + chr2.3:5225749-5225768 MS.gene78386:CDS 35.0%
ACTCATATTGACCCAAAAAG+TGG + chr2.3:5225580-5225599 MS.gene78386:CDS 35.0%
ACTTGATGCTAAACAAGCAT+TGG + chr2.3:5227018-5227037 MS.gene78386:CDS 35.0%
AGGTGAAAATTGGTAGAATC+GGG + chr2.3:5227731-5227750 MS.gene78386:intron 35.0%
ATATGTTCGACATATCACAC+AGG + chr2.3:5228449-5228468 MS.gene78386:intron 35.0%
ATGAGAAAGCAGTAACTAAG+AGG + chr2.3:5228065-5228084 MS.gene78386:CDS 35.0%
ATTTGACACAGAAGACCAAA+TGG - chr2.3:5226717-5226736 None:intergenic 35.0%
CATCTTTGAACACAAACAAC+TGG - chr2.3:5227681-5227700 None:intergenic 35.0%
CATTGGAATTGGAGATAGAA+CGG + chr2.3:5227035-5227054 MS.gene78386:CDS 35.0%
CCAAATTGAACAACTGCAAA+GGG - chr2.3:5225709-5225728 None:intergenic 35.0%
GAAAAGGAAGAGGAATTAGA+GGG + chr2.3:5227148-5227167 MS.gene78386:CDS 35.0%
GATTTAGAGGTGAAACATTC+TGG + chr2.3:5226174-5226193 MS.gene78386:intron 35.0%
TCACAAGAAAATTCATGACC+TGG + chr2.3:5226988-5227007 MS.gene78386:CDS 35.0%
TCCAAATTGAACAACTGCAA+AGG - chr2.3:5225710-5225729 None:intergenic 35.0%
TCTCTAACTTCATAGCATTG+TGG - chr2.3:5225750-5225769 None:intergenic 35.0%
TGAGAAAGCAGTAACTAAGA+GGG + chr2.3:5228066-5228085 MS.gene78386:CDS 35.0%
TGTTAGCATTCCTTACTCTA+TGG + chr2.3:5226690-5226709 MS.gene78386:intron 35.0%
TGTTCAATTTGGAAGAGAGT+GGG + chr2.3:5225717-5225736 MS.gene78386:CDS 35.0%
TTAAATGAGTACAACCCTAG+TGG + chr2.3:5228564-5228583 MS.gene78386:CDS 35.0%
TTCCAGGTAATGAATCACAT+TGG + chr2.3:5227070-5227089 MS.gene78386:CDS 35.0%
TTGTTCAATTTGGAAGAGAG+TGG + chr2.3:5225716-5225735 MS.gene78386:CDS 35.0%
! AAATTCCAGAGTTCTGGTAT+TGG - chr2.3:5228597-5228616 None:intergenic 35.0%
! AATTCCAGAGTTCTGGTATT+GGG - chr2.3:5228596-5228615 None:intergenic 35.0%
! ACAAAAGTGTGTTCATGAGA+GGG - chr2.3:5226570-5226589 None:intergenic 35.0%
! CAACGGCCAATACAAATTTT+CGG + chr2.3:5227553-5227572 MS.gene78386:intron 35.0%
! CATGAACACACTTTTGTGAT+AGG + chr2.3:5226573-5226592 MS.gene78386:intron 35.0%
! CCAAAAAGTGGAAAGTATGT+TGG + chr2.3:5225592-5225611 MS.gene78386:CDS 35.0%
! GCTTACAGTCTGTTACATTT+TGG + chr2.3:5226228-5226247 MS.gene78386:intron 35.0%
! GGGATTTGAAAACTGTTTCT+GGG + chr2.3:5225914-5225933 MS.gene78386:CDS 35.0%
! TAAGAGGGAATTTTCAGAGA+AGG + chr2.3:5228081-5228100 MS.gene78386:CDS 35.0%
!! ATACCAGGAGAAAGTATCTA+AGG + chr2.3:5226352-5226371 MS.gene78386:CDS 35.0%
!! CCAACATACTTTCCACTTTT+TGG - chr2.3:5225595-5225614 None:intergenic 35.0%
!! TGCTAAACAAGCATTGGAAT+TGG + chr2.3:5227024-5227043 MS.gene78386:CDS 35.0%
!! TTACTTTTACTTGTGCACAG+TGG + chr2.3:5227930-5227949 MS.gene78386:intron 35.0%
!!! ACCAGAACTCTGGAATTTTA+GGG + chr2.3:5228599-5228618 MS.gene78386:CDS 35.0%
!!! TACCAGAACTCTGGAATTTT+AGG + chr2.3:5228598-5228617 MS.gene78386:CDS 35.0%
AAAATTCATGACCTGGAGAG+AGG + chr2.3:5226995-5227014 MS.gene78386:CDS 40.0%
AAAATTGGTAGAATCGGGTC+AGG + chr2.3:5227736-5227755 MS.gene78386:intron 40.0%
AAAGTGGGATGACTGTGTTA+AGG + chr2.3:5228132-5228151 MS.gene78386:CDS 40.0%
AAGGAAAGCGATGGATCAAA+AGG + chr2.3:5226059-5226078 MS.gene78386:CDS 40.0%
AAGTCTGAAGGATGAATTCG+GGG + chr2.3:5228503-5228522 MS.gene78386:CDS 40.0%
AATCATGGCAACAAAGCAAC+AGG - chr2.3:5227886-5227905 None:intergenic 40.0%
AATGATGCTGAGGGTCATTT+GGG + chr2.3:5225487-5225506 MS.gene78386:CDS 40.0%
ACAGGGCAGTAACTTTCAAT+GGG - chr2.3:5225666-5225685 None:intergenic 40.0%
ACCAAATGGTCCATAGAGTA+AGG - chr2.3:5226703-5226722 None:intergenic 40.0%
AGACATGCATCCAGAATTGT+GGG + chr2.3:5225286-5225305 MS.gene78386:intron 40.0%
ATGAGTTGTTTGTATGGCCA+TGG + chr2.3:5225533-5225552 MS.gene78386:CDS 40.0%
CATTAGAGATCAGCATGATG+CGG + chr2.3:5226315-5226334 MS.gene78386:intron 40.0%
CCCTTTGCAGTTGTTCAATT+TGG + chr2.3:5225706-5225725 MS.gene78386:CDS 40.0%
CCTGAAGGATGATTACTACA+AGG + chr2.3:5225184-5225203 MS.gene78386:CDS 40.0%
CCTTGTAGTAATCATCCTTC+AGG - chr2.3:5225187-5225206 None:intergenic 40.0%
CTCCAATGTGATTCATTACC+TGG - chr2.3:5227075-5227094 None:intergenic 40.0%
GATCCTTAGATACTTTCTCC+TGG - chr2.3:5226358-5226377 None:intergenic 40.0%
GGAAAAGGAAGAGGAATTAG+AGG + chr2.3:5227147-5227166 MS.gene78386:CDS 40.0%
GGCAATAGAAGAGCAACAAA+AGG + chr2.3:5226818-5226837 MS.gene78386:CDS 40.0%
GGGGATTTGAAAACTGTTTC+TGG + chr2.3:5225913-5225932 MS.gene78386:CDS 40.0%
GTCTTTGGCTGAAGAACATA+AGG + chr2.3:5226857-5226876 MS.gene78386:CDS 40.0%
GTGTTCATGAGAGGGTTAAA+AGG - chr2.3:5226562-5226581 None:intergenic 40.0%
GTTCTGTTAAGACACACCTT+TGG + chr2.3:5228265-5228284 MS.gene78386:intron 40.0%
TCACATTGGAGAGACTGATA+TGG + chr2.3:5227084-5227103 MS.gene78386:CDS 40.0%
TCCCTAAAATTCCAGAGTTC+TGG - chr2.3:5228603-5228622 None:intergenic 40.0%
TCCTTACTCTATGGACCATT+TGG + chr2.3:5226699-5226718 MS.gene78386:intron 40.0%
TTCGTGAAGTCATTGTACCT+TGG - chr2.3:5228206-5228225 None:intergenic 40.0%
TTGATCCATCGCTTTCCTTA+GGG - chr2.3:5226058-5226077 None:intergenic 40.0%
TTGGCCATCAACTCATCTTA+TGG + chr2.3:5227299-5227318 MS.gene78386:intron 40.0%
TTTACTTGTGCACAGTGGAT+TGG + chr2.3:5227935-5227954 MS.gene78386:intron 40.0%
TTTGATCCATCGCTTTCCTT+AGG - chr2.3:5226059-5226078 None:intergenic 40.0%
! CACAAAAGTGTGTTCATGAG+AGG - chr2.3:5226571-5226590 None:intergenic 40.0%
! CAGACCATAAGATGAGTTGA+TGG - chr2.3:5227306-5227325 None:intergenic 40.0%
! CTAATTCCTCTTCCTTTTCC+TGG - chr2.3:5227147-5227166 None:intergenic 40.0%
! TGCTGGTGTTAGCACTTATT+TGG + chr2.3:5228382-5228401 MS.gene78386:intron 40.0%
! TTTTCAAATCCCCATTTCCC+TGG - chr2.3:5225906-5225925 None:intergenic 40.0%
!! AGAGGGATTACTTGGCTTTA+CGG + chr2.3:5225797-5225816 MS.gene78386:CDS 40.0%
!! CACGAGCTTGTTCTGATTTT+CGG - chr2.3:5225124-5225143 None:intergenic 40.0%
!! CTTTTAGCTGCTTCCAGAAA+TGG - chr2.3:5228025-5228044 None:intergenic 40.0%
!! GAATTTTAGGGAAGGAAGGA+AGG + chr2.3:5228611-5228630 MS.gene78386:CDS 40.0%
!! GGTCTTCAGCTTTAAGGTAT+TGG - chr2.3:5225989-5226008 None:intergenic 40.0%
!! TCTGGAATTTTAGGGAAGGA+AGG + chr2.3:5228607-5228626 MS.gene78386:CDS 40.0%
!! TTGTCCTCTAAAGTTCCACA+GGG - chr2.3:5225683-5225702 None:intergenic 40.0%
!! TTTGTCCTCTAAAGTTCCAC+AGG - chr2.3:5225684-5225703 None:intergenic 40.0%
!!! GAACTCTGGAATTTTAGGGA+AGG + chr2.3:5228603-5228622 MS.gene78386:CDS 40.0%
!!! GTTTTGAGGACTCTTTTGGT+TGG + chr2.3:5226939-5226958 MS.gene78386:intron 40.0%
AAAGCTGAAGACCGAGGAAT+TGG + chr2.3:5225996-5226015 MS.gene78386:CDS 45.0%
AAGGAGGAGCTGATCATGAA+CGG + chr2.3:5225634-5225653 MS.gene78386:CDS 45.0%
ACAAGCTCGTGAGTCTGATT+TGG + chr2.3:5225133-5225152 MS.gene78386:CDS 45.0%
ACTGTGTTAAGGATCCTAGC+TGG + chr2.3:5228143-5228162 MS.gene78386:CDS 45.0%
AGATAGACTCTTTGGGTGGA+TGG + chr2.3:5225834-5225853 MS.gene78386:CDS 45.0%
AGGAAGGAAGGCTTCATTGA+AGG + chr2.3:5228623-5228642 MS.gene78386:CDS 45.0%
AGGAAGGCTTCATTGAAGGA+AGG + chr2.3:5228627-5228646 MS.gene78386:CDS 45.0%
ATAGTTGGCAAACACCTCCA+GGG + chr2.3:5225886-5225905 MS.gene78386:CDS 45.0%
ATGACTCGAGCAGTGTTCTT+TGG - chr2.3:5227965-5227984 None:intergenic 45.0%
ATGAGGTGAATGTGTCCCTA+AGG + chr2.3:5226040-5226059 MS.gene78386:CDS 45.0%
ATGAGTACAACCCTAGTGGT+AGG + chr2.3:5228568-5228587 MS.gene78386:CDS 45.0%
CAATTTGGAAGAGAGTGGGA+TGG + chr2.3:5225721-5225740 MS.gene78386:CDS 45.0%
CACAGGGCAGTAACTTTCAA+TGG - chr2.3:5225667-5225686 None:intergenic 45.0%
CATTGAAAGTTACTGCCCTG+TGG + chr2.3:5225665-5225684 MS.gene78386:CDS 45.0%
CGAACTTATTTCCCGTGAGA+AGG + chr2.3:5226415-5226434 MS.gene78386:CDS 45.0%
CTAAGGATCATGAAAAGGCC+AGG + chr2.3:5226369-5226388 MS.gene78386:CDS 45.0%
CTGTGGTAAGAGGGATTACT+TGG + chr2.3:5225789-5225808 MS.gene78386:CDS 45.0%
GAATGATGCTGAGGGTCATT+TGG + chr2.3:5225486-5225505 MS.gene78386:CDS 45.0%
GACAGCTAGCAAGTATGATG+AGG + chr2.3:5226023-5226042 MS.gene78386:CDS 45.0%
GAGACATGCATCCAGAATTG+TGG + chr2.3:5225285-5225304 MS.gene78386:intron 45.0%
GGAAGATCTTCAACAAACGC+TGG + chr2.3:5227174-5227193 MS.gene78386:CDS 45.0%
GTATTGGGTACCTACCACTA+GGG - chr2.3:5228581-5228600 None:intergenic 45.0%
GTTGTTTGTATGGCCATGGA+TGG + chr2.3:5225537-5225556 MS.gene78386:CDS 45.0%
TACCTTAAAGCTGAAGACCG+AGG + chr2.3:5225990-5226009 MS.gene78386:CDS 45.0%
TATAGTTGGCAAACACCTCC+AGG + chr2.3:5225885-5225904 MS.gene78386:CDS 45.0%
TGACAAAGAAGGGAACTCCA+AGG + chr2.3:5228186-5228205 MS.gene78386:CDS 45.0%
TGACTCGAGCAGTGTTCTTT+GGG - chr2.3:5227964-5227983 None:intergenic 45.0%
TGCAAATGAAAGCCATCGAG+TGG + chr2.3:5228104-5228123 MS.gene78386:CDS 45.0%
TGTTGCTAAGCATTCAGCTC+TGG + chr2.3:5225333-5225352 MS.gene78386:CDS 45.0%
TTCCTCGGTCTTCAGCTTTA+AGG - chr2.3:5225995-5226014 None:intergenic 45.0%
TTGGAGATAGAACGGCTGAA+AGG + chr2.3:5227043-5227062 MS.gene78386:CDS 45.0%
TTTCCCTGCTATGAGCTGTA+TGG + chr2.3:5228413-5228432 MS.gene78386:intron 45.0%
! CTGTCCGTTTTGCTACAACA+AGG + chr2.3:5225238-5225257 MS.gene78386:intron 45.0%
! TCAACAAACGCTGGTTGTTC+AGG + chr2.3:5227183-5227202 MS.gene78386:CDS 45.0%
! TGCAGTAGCTACAGCTTTGA+AGG + chr2.3:5228539-5228558 MS.gene78386:CDS 45.0%
!! GAGGGATTACTTGGCTTTAC+GGG + chr2.3:5225798-5225817 MS.gene78386:CDS 45.0%
!! TGTTTCTGGGAAAGAAGCTG+AGG + chr2.3:5225927-5225946 MS.gene78386:CDS 45.0%
AAAGCGAGGAAGCTTCTCTC+TGG + chr2.3:5225958-5225977 MS.gene78386:CDS 50.0%
AATTGTGGGTGACTCAGGTG+AGG + chr2.3:5225300-5225319 MS.gene78386:intron 50.0%
ACCTGAGTCACCCACAATTC+TGG - chr2.3:5225299-5225318 None:intergenic 50.0%
ACTGCCCTGTGGAACTTTAG+AGG + chr2.3:5225676-5225695 MS.gene78386:CDS 50.0%
ACTTTGAACGGATGCCAGCT+AGG - chr2.3:5228160-5228179 None:intergenic 50.0%
AGCAATCAGAATGGAGCTCC+AGG + chr2.3:5227126-5227145 MS.gene78386:CDS 50.0%
AGCGGGGAGATAGACTCTTT+GGG + chr2.3:5225827-5225846 MS.gene78386:CDS 50.0%
AGCTGTCTGCTCCAATTCCT+CGG - chr2.3:5226010-5226029 None:intergenic 50.0%
AGGAGGAGCTGATCATGAAC+GGG + chr2.3:5225635-5225654 MS.gene78386:CDS 50.0%
CAAACACCTCCAGGGAAATG+GGG + chr2.3:5225894-5225913 MS.gene78386:CDS 50.0%
CAGAATGGAGCTCCAGGAAA+AGG + chr2.3:5227132-5227151 MS.gene78386:CDS 50.0%
CATCGAGTGGTGCTCAAAGT+GGG + chr2.3:5228117-5228136 MS.gene78386:CDS 50.0%
CTTCTGCAGATCCTTCTCAC+GGG - chr2.3:5226429-5226448 None:intergenic 50.0%
GAAGGATGAATTCGGGGATG+AGG + chr2.3:5228509-5228528 MS.gene78386:CDS 50.0%
GAGGAAGCTTCTCTCTGGTT+TGG + chr2.3:5225963-5225982 MS.gene78386:CDS 50.0%
GCAAACACCTCCAGGGAAAT+GGG + chr2.3:5225893-5225912 MS.gene78386:CDS 50.0%
GCTTCTGCAGATCCTTCTCA+CGG - chr2.3:5226430-5226449 None:intergenic 50.0%
GGAAAGAAGCTGAGGACAAC+AGG + chr2.3:5225935-5225954 MS.gene78386:CDS 50.0%
GGAAGAGGAATTAGAGGGTG+TGG + chr2.3:5227153-5227172 MS.gene78386:CDS 50.0%
GGTACCCAATACCAGAACTC+TGG + chr2.3:5228589-5228608 MS.gene78386:CDS 50.0%
GGTCCATACAGCTCATAGCA+GGG - chr2.3:5228419-5228438 None:intergenic 50.0%
TAGCATCAAGTCCTCTCTCC+AGG - chr2.3:5227009-5227028 None:intergenic 50.0%
TCAAATCCCCATTTCCCTGG+AGG - chr2.3:5225903-5225922 None:intergenic 50.0%
TCCAGAATTGTGGGTGACTC+AGG + chr2.3:5225295-5225314 MS.gene78386:intron 50.0%
TGGTCCATACAGCTCATAGC+AGG - chr2.3:5228420-5228439 None:intergenic 50.0%
TGTGTCCCTAAGGAAAGCGA+TGG + chr2.3:5226050-5226069 MS.gene78386:CDS 50.0%
! GGTATTGGGTACCTACCACT+AGG - chr2.3:5228582-5228601 None:intergenic 50.0%
!! AAGCAGAGCACTGTGGTAAG+AGG + chr2.3:5225779-5225798 MS.gene78386:CDS 50.0%
!! AGCAGAGCACTGTGGTAAGA+GGG + chr2.3:5225780-5225799 MS.gene78386:CDS 50.0%
!! AGCTTTCAAGCAGAGCACTG+TGG + chr2.3:5225772-5225791 MS.gene78386:CDS 50.0%
!! TTACTTGGCTTTACGGGAGC+AGG + chr2.3:5225804-5225823 MS.gene78386:CDS 50.0%
ACGGCTGAAAGGAGCTTTCC+AGG + chr2.3:5227054-5227073 MS.gene78386:CDS 55.0%
AGAGATCAGCATGATGCGGC+AGG + chr2.3:5226319-5226338 MS.gene78386:intron 55.0%
CCACTTTGAGCACCACTCGA+TGG - chr2.3:5228119-5228138 None:intergenic 55.0%
CCAGGCTGGAACTAGAAGCT+CGG + chr2.3:5226387-5226406 MS.gene78386:CDS 55.0%
CCATCGAGTGGTGCTCAAAG+TGG + chr2.3:5228116-5228135 MS.gene78386:CDS 55.0%
CTGAGGACAACAGGAAAGCG+AGG + chr2.3:5225944-5225963 MS.gene78386:CDS 55.0%
GAGCGGGGAGATAGACTCTT+TGG + chr2.3:5225826-5225845 MS.gene78386:CDS 55.0%
GCAAAACGGACAGCGAAACG+TGG - chr2.3:5225231-5225250 None:intergenic 55.0%
GGAGCTCCAGGAAAAGGAAG+AGG + chr2.3:5227138-5227157 MS.gene78386:CDS 55.0%
GGATCATGAAAAGGCCAGGC+TGG + chr2.3:5226373-5226392 MS.gene78386:CDS 55.0%
GGCAAACACCTCCAGGGAAA+TGG + chr2.3:5225892-5225911 MS.gene78386:CDS 55.0%
GGGGAGATAGACTCTTTGGG+TGG + chr2.3:5225830-5225849 MS.gene78386:CDS 55.0%
! GCAGGTTGAACGCGAATACC+AGG + chr2.3:5226337-5226356 MS.gene78386:CDS 55.0%
GGCTGGAACTAGAAGCTCGG+AGG + chr2.3:5226390-5226409 MS.gene78386:CDS 60.0%
! TGGCTTTACGGGAGCAGGAG+CGG + chr2.3:5225809-5225828 MS.gene78386:CDS 60.0%
!! CCGAGCTTCTAGTTCCAGCC+TGG - chr2.3:5226390-5226409 None:intergenic 60.0%
GCTTTACGGGAGCAGGAGCG+GGG + chr2.3:5225811-5225830 MS.gene78386:CDS 65.0%
GGCTTTACGGGAGCAGGAGC+GGG + chr2.3:5225810-5225829 MS.gene78386:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 5225116 5228704 5225116 ID=MS.gene78386
chr2.3 mRNA 5225116 5228704 5225116 ID=MS.gene78386.t1;Parent=MS.gene78386
chr2.3 exon 5225116 5225239 5225116 ID=MS.gene78386.t1.exon1;Parent=MS.gene78386.t1
chr2.3 CDS 5225116 5225239 5225116 ID=cds.MS.gene78386.t1;Parent=MS.gene78386.t1
chr2.3 exon 5225317 5226108 5225317 ID=MS.gene78386.t1.exon2;Parent=MS.gene78386.t1
chr2.3 CDS 5225317 5226108 5225317 ID=cds.MS.gene78386.t1;Parent=MS.gene78386.t1
chr2.3 exon 5226321 5226502 5226321 ID=MS.gene78386.t1.exon3;Parent=MS.gene78386.t1
chr2.3 CDS 5226321 5226502 5226321 ID=cds.MS.gene78386.t1;Parent=MS.gene78386.t1
chr2.3 exon 5226810 5226878 5226810 ID=MS.gene78386.t1.exon4;Parent=MS.gene78386.t1
chr2.3 CDS 5226810 5226878 5226810 ID=cds.MS.gene78386.t1;Parent=MS.gene78386.t1
chr2.3 exon 5226971 5227255 5226971 ID=MS.gene78386.t1.exon5;Parent=MS.gene78386.t1
chr2.3 CDS 5226971 5227255 5226971 ID=cds.MS.gene78386.t1;Parent=MS.gene78386.t1
chr2.3 exon 5227950 5228207 5227950 ID=MS.gene78386.t1.exon6;Parent=MS.gene78386.t1
chr2.3 CDS 5227950 5228207 5227950 ID=cds.MS.gene78386.t1;Parent=MS.gene78386.t1
chr2.3 exon 5228471 5228704 5228471 ID=MS.gene78386.t1.exon7;Parent=MS.gene78386.t1
chr2.3 CDS 5228471 5228704 5228471 ID=cds.MS.gene78386.t1;Parent=MS.gene78386.t1
Gene Sequence

>MS.gene78386

ATGTACCGAAAATCAGAACAAGCTCGTGAGTCTGATTTGGAGTACTACAAGCGTAGATATTATGAAGACCTGAAGGATGATTACTACAAGGAAACGCTCAAAATCTCTGATTCCACGTTTCGCTGTCCGTTTTGCTACAACAAGGATTACTACTCTTGGAGTGAGCTATGAGACATGCATCCAGAATTGTGGGTGACTCAGGTGAGGCAGTTAAAGATGTTGCTAAGCATTCAGCTCTGGAAATGTATATTGAAAGCTATGGTGATAAGTTAACTGCTGTTACTATTGATAATGATAAGACCCCTTGTGTTAGTACTGTTAATGATAAGTTGGTTAATTTGAGTATCGCTAATGAGAAGTCACTTATTATGAATGATGCTGAGGGTCATTTGGGTAATGTGAATGATGATGATGATGATGAGTTGTTTGTATGGCCATGGATGGTGATTTTGAAAAATATTGTTACTCATATTGACCCAAAAAGTGGAAAGTATGTTGGGAAGAATCATAAAAAAATTAAGGAGGAGCTGATCATGAACGGGTTTCACCCATTGAAAGTTACTGCCCTGTGGAACTTTAGAGGACAAACACCCTTTGCAGTTGTTCAATTTGGAAGAGAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAGAGGAGCTTTCAAGCAGAGCACTGTGGTAAGAGGGATTACTTGGCTTTACGGGAGCAGGAGCGGGGAGATAGACTCTTTGGGTGGATGGCACGTCGTGATGACTATAATTTCAAAGATATAGTTGGCAAACACCTCCAGGGAAATGGGGATTTGAAAACTGTTTCTGGGAAAGAAGCTGAGGACAACAGGAAAGCGAGGAAGCTTCTCTCTGGTTTGGCCAATACCTTAAAGCTGAAGACCGAGGAATTGGAGCAGACAGCTAGCAAGTATGATGAGGTGAATGTGTCCCTAAGGAAAGCGATGGATCAAAAGGAAAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAGTTAAACTGAACTGTTTTAATTAATATTGGTTAATATTGATGTTCTGTTTCTTTGATTTAGAGGTGAAACATTCTGGTTTTTACTACTATATCTATCATTTTGGTGTAGCTTACAGTCTGTTACATTTTGGAATGATTTGTAGTTGATTTGATTTTTTAATATTTCATGGTAGCTTAGTCTGTTTTATATTGTTTCATTAGAGATCAGCATGATGCGGCAGGTTGAACGCGAATACCAGGAGAAAGTATCTAAGGATCATGAAAAGGCCAGGCTGGAACTAGAAGCTCGGAGGAACGAACTTATTTCCCGTGAGAAGGATCTGCAGAAGCGTGAAGCAGATAATCACAATGAGAAAACCAAGCTATATTTTGAGAAGAAACATGTAATATATTTCTGGTATTTTAATTTATGATAGCAATGCTAAATGAATTATTCTCTCCTTTTAACCCTCTCATGAACACACTTTTGTGATAGGTCAATTTCTAAAATTTTACACATTTCTTTGTAAGTGATCAATTTATAGGAGAACTAAATTTGCTTCTTTAAAATGGACCAATCACAAAAAGTGTTGTTAGCATTCCTTACTCTATGGACCATTTGGTCTTCTGTGTCAAATGTTTTACACCAATCCCTGTTATTTTTCAATAACTTATGCAGATTAAATCTGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCAATAGAAGAGCAACAAAAGGCTGATGAAAAAATGATGTCTTTGGCTGAAGAACATAAGGCACGCATTTCATTTTCCTTTTATCTACAGTTTTTAATTCAGTTGCATGTATATACTTAAGTTTTGAGGACTCTTTTGGTTGGATGTTGCAGAAAGAAAAAGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTTGATGCTAAACAAGCATTGGAATTGGAGATAGAACGGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTGGAGAGACTGATATGGATGAGAAGAAAAAATTGGAAGCAATCAGAATGGAGCTCCAGGAAAAGGAAGAGGAATTAGAGGGTGTGGAAGATCTTCAACAAACGCTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGTTAATAGCTGTATGTATCTTCCTCAGCATATAAATGTTAATATTAATGTCTTTTGGCCATCAACTCATCTTATGGTCTGAAAATCAACTTTAAAATGTCTTCTGTAACTAATCTTTTACAAAGTCAGGATAGATTGTTTTATTTGTATAAATTGCCTTGTGAAACTTAAGCAGAAATGTAGGACATACAACTGTTTATATAAAAATACTACTAAAAGAAAAGTGTCCTGTTTGCAAACATTCAAATCATGTAGTTGAAATCTTATTTAAGTTGCTTGGAAGACAATGTCTTGTTCACATGTATTTACAACGGCCAATACAAATTTTCGGTGTTTTCAATTCAGTTTCTATAACTAAGGAATTTCACTTTATCAACGTATCATCTTATGACGAGAATAACTTGGTTGCTTGTCTAAACTGTCTATTAGCTATCCAGTTGTTTGTGTTCAAAGATGATGATTTTAATTCATAAAGTTTTACATTTTAGGTGAAAATTGGTAGAATCGGGTCAGGTCTACGAAAAATAGCAGATTTTGTTTTTACATTTTCAGTTAATTTGTCATATTGTTTCATACTGGTTCAATCATAAGGTATCTGATGCCTAAACTTGAAGCAAAATAAGTTCAAGCAGATTGTTCCTGTTGCTTTGTTGCCATGATTTCATTGTTTGTTTTGTCCAATTAATTACTTTTACTTGTGCACAGTGGATTGGCTGCCCAAAGAACACTGCTCGAGTCATAATTTCTGTGAAAAGGATGGGCGAACTTGATATTAAGCCATTTCTGGAAGCAGCTAAAAGAAAATTTTCTGATGAAATGAATGAGAAAGCAGTAACTAAGAGGGAATTTTCAGAGAAGGTGCAAATGAAAGCCATCGAGTGGTGCTCAAAGTGGGATGACTGTGTTAAGGATCCTAGCTGGCATCCGTTCAAAGTTGTAACTGACAAAGAAGGGAACTCCAAGGTACAATGACTTCACGAATTATGTTTGTTCGTTAAAATTAATATTTTTTTCTCAACTGTTCTGTTAAGACACACCTTTGGATATATTTATCTCCTAAAACATATAGTGCTCCATTTCTTAATAATTAGAAAGCATGGTAATTGGTATTGTGTAGTGATCTATTTACTGGAAATTTGCTGGTGTTAGCACTTATTTGGCATGTTAGTTTCCCTGCTATGAGCTGTATGGACCATGATCTAATATATGTTCGACATATCACACAGGAAATTTTAGACGGAGAAGATAAAAAGCTGAAAAGTCTGAAGGATGAATTCGGGGATGAGGTGCATGATGCAGTAGCTACAGCTTTGAAGGAGTTAAATGAGTACAACCCTAGTGGTAGGTACCCAATACCAGAACTCTGGAATTTTAGGGAAGGAAGGAAGGCTTCATTGAAGGAAGGTGTTTCCCATTTAATTAAGCAATGGAGATTAAATAAGGGAAAGAAAGCTTATTGA
Protein sequence

>MS.gene78386.t1

MYRKSEQARESDLEYYKRRYYEDLKDDYYKETLKISDSTFRCEAVKDVAKHSALEMYIESYGDKLTAVTIDNDKTPCVSTVNDKLVNLSIANEKSLIMNDAEGHLGNVNDDDDDELFVWPWMVILKNIVTHIDPKSGKYVGKNHKKIKEELIMNGFHPLKVTALWNFRGQTPFAVVQFGREWDGFHNAMKLERSFQAEHCGKRDYLALREQERGDRLFGWMARRDDYNFKDIVGKHLQGNGDLKTVSGKEAEDNRKARKLLSGLANTLKLKTEELEQTASKYDEVNVSLRKAMDQKEKMLEHFNKEISMMRQVEREYQEKVSKDHEKARLELEARRNELISREKDLQKREADNHNEKTKLYFEKKHNEMAIEEQQKADEKMMSLAEEHKKEKEKLHKKIHDLERGLDAKQALELEIERLKGAFQVMNHIGETDMDEKKKLEAIRMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLIAWIGCPKNTARVIISVKRMGELDIKPFLEAAKRKFSDEMNEKAVTKREFSEKVQMKAIEWCSKWDDCVKDPSWHPFKVVTDKEGNSKEILDGEDKKLKSLKDEFGDEVHDAVATALKELNEYNPSGRYPIPELWNFREGRKASLKEGVSHLIKQWRLNKGKKAY