Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78603.t1 | XP_003626259.1 | 90 | 428 | 13 | 1 | 1 | 398 | 6 | 433 | 9.80E-213 | 749.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78603.t1 | Q3E6S8 | 56.7 | 425 | 135 | 7 | 8 | 395 | 14 | 426 | 2.8e-123 | 443.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78603.t1 | A2Q336 | 90.0 | 428 | 13 | 1 | 1 | 398 | 6 | 433 | 7.1e-213 | 749.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050896 | MS.gene78603 | 0.900946 | 4.40E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004101 | MS.gene78603 | PPI |
| MS.gene021049 | MS.gene78603 | PPI |
| MS.gene67376 | MS.gene78603 | PPI |
| MS.gene036453 | MS.gene78603 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78603.t1 | MTR_7g113170 | 89.953 | 428 | 13 | 1 | 1 | 398 | 6 | 433 | 0.0 | 763 |
| MS.gene78603.t1 | MTR_7g113170 | 88.579 | 359 | 11 | 1 | 1 | 329 | 6 | 364 | 0.0 | 630 |
| MS.gene78603.t1 | MTR_6g007030 | 27.961 | 304 | 151 | 10 | 123 | 378 | 128 | 411 | 6.06e-24 | 103 |
| MS.gene78603.t1 | MTR_6g011810 | 25.974 | 308 | 160 | 11 | 142 | 395 | 165 | 458 | 4.00e-21 | 95.1 |
| MS.gene78603.t1 | MTR_5g464730 | 32.692 | 156 | 96 | 3 | 230 | 381 | 197 | 347 | 1.48e-15 | 77.8 |
| MS.gene78603.t1 | MTR_2g019140 | 33.333 | 183 | 82 | 6 | 142 | 285 | 133 | 314 | 1.51e-14 | 74.3 |
| MS.gene78603.t1 | MTR_5g064160 | 29.677 | 155 | 100 | 3 | 230 | 380 | 253 | 402 | 6.50e-13 | 70.1 |
| MS.gene78603.t1 | MTR_5g064160 | 29.487 | 156 | 101 | 3 | 230 | 381 | 218 | 368 | 6.92e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78603.t1 | AT5G27660 | 57.647 | 425 | 137 | 6 | 8 | 395 | 14 | 432 | 6.24e-164 | 467 |
| MS.gene78603.t1 | AT5G27660 | 56.706 | 425 | 135 | 7 | 8 | 395 | 9 | 421 | 7.16e-158 | 451 |
| MS.gene78603.t1 | AT3G27925 | 28.395 | 324 | 161 | 11 | 123 | 394 | 135 | 439 | 5.28e-25 | 106 |
| MS.gene78603.t1 | AT3G27925 | 28.395 | 324 | 161 | 11 | 123 | 394 | 135 | 439 | 5.28e-25 | 106 |
| MS.gene78603.t1 | AT5G39830 | 25.325 | 308 | 162 | 10 | 142 | 395 | 155 | 448 | 1.20e-19 | 90.9 |
| MS.gene78603.t1 | AT5G39830 | 24.262 | 305 | 155 | 10 | 142 | 395 | 155 | 434 | 1.75e-15 | 78.2 |
| MS.gene78603.t1 | AT4G18370 | 32.124 | 193 | 87 | 7 | 142 | 293 | 131 | 320 | 6.87e-13 | 69.7 |
Find 118 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTCCCTAATGTCAATA+AGG | 0.269170 | 7.1:-3171923 | MS.gene78603:CDS |
| TGTATGGCACAGGGAAATTC+TGG | 0.299439 | 7.1:-3172448 | MS.gene78603:intron |
| TCCTTCTTCGGACATGTCTA+AGG | 0.309122 | 7.1:-3174506 | MS.gene78603:CDS |
| TGGAGGGCCACTTGTCAATA+TGG | 0.315113 | 7.1:-3172428 | MS.gene78603:CDS |
| CTAGGCTTCGTCCCGGGGAT+TGG | 0.328014 | 7.1:-3172872 | MS.gene78603:intron |
| TGACCGTAAAAGCAGTGATT+TGG | 0.333135 | 7.1:-3172623 | MS.gene78603:CDS |
| TGCGACTTTAACTGTGATTC+CGG | 0.336668 | 7.1:-3170562 | MS.gene78603:CDS |
| AGAATGCCCTTATTGACATT+AGG | 0.346180 | 7.1:+3171916 | None:intergenic |
| GGGTCCCCTGGTGATCGTGC+TGG | 0.357975 | 7.1:-3171051 | MS.gene78603:CDS |
| GAATGCCCTTATTGACATTA+GGG | 0.359755 | 7.1:+3171917 | None:intergenic |
| AAGCCATCTAAGGATACTTT+TGG | 0.364970 | 7.1:-3174454 | MS.gene78603:CDS |
| GACCGTAAAAGCAGTGATTT+GGG | 0.371160 | 7.1:-3172622 | MS.gene78603:CDS |
| GACATGTCTAAGGAAACTTC+TGG | 0.371904 | 7.1:-3174496 | MS.gene78603:CDS |
| ATCTGTTTGTAAATACTCTC+TGG | 0.378364 | 7.1:+3172585 | None:intergenic |
| TGATGAATCAAAGCCATCTA+AGG | 0.379781 | 7.1:-3174464 | MS.gene78603:CDS |
| AGCAGTGATTTGGGATTTAG+TGG | 0.380979 | 7.1:-3172613 | MS.gene78603:CDS |
| GATGTTGTCATTGAATTTGA+TGG | 0.389841 | 7.1:-3171015 | MS.gene78603:CDS |
| AGTTAGCCCTGTTCCTTCTT+CGG | 0.392277 | 7.1:-3174518 | MS.gene78603:CDS |
| TTGAACACAAACCTTCCCTT+TGG | 0.396372 | 7.1:+3174159 | None:intergenic |
| AAATGATGGTGGACAAAGTT+GGG | 0.397529 | 7.1:-3170626 | MS.gene78603:CDS |
| CAAGATGGAAGGACATTTGA+GGG | 0.403027 | 7.1:-3172987 | MS.gene78603:CDS |
| TAGGCTTCGTCCCGGGGATT+GGG | 0.404252 | 7.1:-3172871 | MS.gene78603:CDS |
| CTTCAACTAGGCTTCGTCCC+GGG | 0.427401 | 7.1:-3172878 | MS.gene78603:intron |
| CGGAACCCAGCACGATCACC+AGG | 0.431496 | 7.1:+3171045 | None:intergenic |
| TGCCATTGCAAGATATATCA+TGG | 0.437451 | 7.1:-3174732 | MS.gene78603:CDS |
| CTACCAAAAGTATCCTTAGA+TGG | 0.439534 | 7.1:+3174451 | None:intergenic |
| TCATTCCCTAATGTCAATAA+GGG | 0.444524 | 7.1:-3171922 | MS.gene78603:CDS |
| GGAATCCAATCTCAGCTTGT+AGG | 0.450834 | 7.1:-3170538 | None:intergenic |
| AGTCTCCTACAAGCTGAGAT+TGG | 0.457251 | 7.1:+3170533 | None:intergenic |
| GGTCCCCTGGTGATCGTGCT+GGG | 0.461837 | 7.1:-3171050 | MS.gene78603:CDS |
| ACTGGAATTAGTGTGGTTAT+CGG | 0.462039 | 7.1:+3175042 | None:intergenic |
| ACATGTCTAAGGAAACTTCT+GGG | 0.469601 | 7.1:-3174495 | MS.gene78603:CDS |
| GTGGACGTAACAAATCAAAC+GGG | 0.472824 | 7.1:+3174695 | None:intergenic |
| TTTGCTACAGGGAAGAGTAT+TGG | 0.475530 | 7.1:-3174265 | MS.gene78603:CDS |
| GTTGCAGGTTATTGAAATGA+TGG | 0.475950 | 7.1:-3170640 | MS.gene78603:intron |
| TAGGTAACTCCTGGGTCCCC+TGG | 0.475953 | 7.1:-3171063 | MS.gene78603:CDS |
| AGTGTTGGCTGCTGATGGGT+TGG | 0.476294 | 7.1:-3172374 | MS.gene78603:CDS |
| TCCTTAGACATGTCCGAAGA+AGG | 0.477491 | 7.1:+3174505 | None:intergenic |
| ATAGAGCATTTCAAGAAAAG+TGG | 0.478194 | 7.1:-3172316 | MS.gene78603:CDS |
| TGTGGACGTAACAAATCAAA+CGG | 0.478244 | 7.1:+3174694 | None:intergenic |
| GTGTTGGCTGCTGATGGGTT+GGG | 0.482417 | 7.1:-3172373 | MS.gene78603:CDS |
| GACATGTCCGAAGAAGGAAC+AGG | 0.489693 | 7.1:+3174511 | None:intergenic |
| TACCTCCTTCATGCTTTCCA+CGG | 0.491263 | 7.1:+3170987 | None:intergenic |
| AGCTCTGCCGTTGGAGCTGT+GGG | 0.496151 | 7.1:-3175097 | MS.gene78603:CDS |
| GATCGTGCTGGGTTCCGTCC+TGG | 0.498642 | 7.1:-3171039 | MS.gene78603:CDS |
| GAAGGACATTTGAGGGAAAG+TGG | 0.499217 | 7.1:-3172980 | MS.gene78603:intron |
| GCAAGATGGAAGGACATTTG+AGG | 0.500220 | 7.1:-3172988 | MS.gene78603:CDS |
| ATTGAAGTCACTTTGCAAGA+TGG | 0.504105 | 7.1:-3173002 | MS.gene78603:CDS |
| CGGGGATTGGGTAATAGCCA+TGG | 0.506433 | 7.1:-3172859 | MS.gene78603:CDS |
| ATCGAAATATTAACAACAGC+AGG | 0.506520 | 7.1:+3174394 | None:intergenic |
| AGAGTGATACGGCCATGGCT+TGG | 0.514213 | 7.1:-3172003 | MS.gene78603:CDS |
| GGAACAATCATTAACAAAGA+TGG | 0.515974 | 7.1:-3174238 | MS.gene78603:CDS |
| ATGAAAGTGTTGGCTGCTGA+TGG | 0.519245 | 7.1:-3172379 | MS.gene78603:CDS |
| TTCAACTAGGCTTCGTCCCG+GGG | 0.519860 | 7.1:-3172877 | MS.gene78603:intron |
| AAGCTCTGCCGTTGGAGCTG+TGG | 0.521174 | 7.1:-3175098 | MS.gene78603:CDS |
| GCAAATGCTGCTGCTAAAGT+TGG | 0.521599 | 7.1:-3174418 | MS.gene78603:CDS |
| GAAATGATGGTGGACAAAGT+TGG | 0.526009 | 7.1:-3170627 | MS.gene78603:CDS |
| ACCTCCTTCATGCTTTCCAC+GGG | 0.531605 | 7.1:+3170988 | None:intergenic |
| GCACAAAAGGTTCATCCAAA+GGG | 0.534147 | 7.1:-3174174 | MS.gene78603:CDS |
| CATGAAAATCAACGACAACA+TGG | 0.539853 | 7.1:+3174197 | None:intergenic |
| TCTTCAACTAGGCTTCGTCC+CGG | 0.539957 | 7.1:-3172879 | MS.gene78603:intron |
| TCAGGAGAGTGATACGGCCA+TGG | 0.540162 | 7.1:-3172008 | MS.gene78603:intron |
| ACAGGGAAGAGTATTGGCTC+TGG | 0.541432 | 7.1:-3174259 | MS.gene78603:CDS |
| CTGTCACTGCTGGTATTGTA+AGG | 0.545354 | 7.1:-3172812 | MS.gene78603:intron |
| CATGGCTATTACCCAATCCC+CGG | 0.547015 | 7.1:+3172860 | None:intergenic |
| AAGGGAATGCGGACAACCCA+TGG | 0.551296 | 7.1:+3172842 | None:intergenic |
| GGCACAAAAGGTTCATCCAA+AGG | 0.554675 | 7.1:-3174175 | MS.gene78603:CDS |
| TAAGGGCATTCTTGTACCAA+TGG | 0.554993 | 7.1:-3171905 | MS.gene78603:intron |
| TTGAACAGAAGCTCTGCCGT+TGG | 0.555512 | 7.1:-3175106 | MS.gene78603:CDS |
| GGGCCACTTGTCAATATGGA+TGG | 0.558327 | 7.1:-3172424 | MS.gene78603:CDS |
| CTTCAGAATACTGTCACTGC+TGG | 0.562372 | 7.1:-3172822 | MS.gene78603:CDS |
| TAGAGCATTTCAAGAAAAGT+GGG | 0.563537 | 7.1:-3172315 | MS.gene78603:intron |
| ACACACAGAGTCGATTGGTA+CGG | 0.565045 | 7.1:+3172345 | None:intergenic |
| AGATATATCATGGTTGACAT+TGG | 0.565755 | 7.1:-3174722 | MS.gene78603:CDS |
| AACCATGATATATCTTGCAA+TGG | 0.566757 | 7.1:+3174730 | None:intergenic |
| GATATATCTTGCAATGGCAA+AGG | 0.570631 | 7.1:+3174736 | None:intergenic |
| CAGCAGTGACAGTATTCTGA+AGG | 0.571751 | 7.1:+3172823 | None:intergenic |
| TAGGAACGTTCGTACGTGTG+CGG | 0.573882 | 7.1:-3174762 | MS.gene78603:CDS |
| AATATGGATGGAGAAATTGT+TGG | 0.576439 | 7.1:-3172412 | MS.gene78603:CDS |
| TCTGTTTGTAAATACTCTCT+GGG | 0.577942 | 7.1:+3172586 | None:intergenic |
| AACGATACCCACAGCTCCAA+CGG | 0.578717 | 7.1:+3175090 | None:intergenic |
| GCTGTGGGTATCGTTGCTGT+TGG | 0.578767 | 7.1:-3175082 | MS.gene78603:CDS |
| AAGCTGAGATTGGATTCCTC+CGG | 0.580230 | 7.1:+3170543 | None:intergenic |
| AAGTCACTTTGCAAGATGGA+AGG | 0.582092 | 7.1:-3172998 | MS.gene78603:CDS |
| GGGGATTGGGTAATAGCCAT+GGG | 0.587526 | 7.1:-3172858 | MS.gene78603:CDS |
| ATGAAAATCAACGACAACAT+GGG | 0.587711 | 7.1:+3174198 | None:intergenic |
| AAAAGGTTCATCCAAAGGGA+AGG | 0.590674 | 7.1:-3174170 | MS.gene78603:intron |
| ATGGCTATTACCCAATCCCC+GGG | 0.595774 | 7.1:+3172861 | None:intergenic |
| TGAAAGTGTTGGCTGCTGAT+GGG | 0.600081 | 7.1:-3172378 | MS.gene78603:CDS |
| GAACCCAGCACGATCACCAG+GGG | 0.600193 | 7.1:+3171047 | None:intergenic |
| GCACGATCACCAGGGGACCC+AGG | 0.601429 | 7.1:+3171054 | None:intergenic |
| ATTGCTCACTGGAATTAGTG+TGG | 0.602326 | 7.1:+3175035 | None:intergenic |
| TCTCCATCCATATTGACAAG+TGG | 0.603386 | 7.1:+3172421 | None:intergenic |
| CAAAGTTGGGGTGCCCATGA+AGG | 0.604534 | 7.1:-3170613 | MS.gene78603:CDS |
| AACAGATTGTGCAATTAATG+TGG | 0.605597 | 7.1:-3172569 | MS.gene78603:intron |
| CATGTCTAAGGAAACTTCTG+GGG | 0.608468 | 7.1:-3174494 | MS.gene78603:CDS |
| TGAATTTGATGGAAAGCCCG+TGG | 0.609844 | 7.1:-3171004 | MS.gene78603:CDS |
| TGGTCGAAAGACGACAAATG+TGG | 0.613228 | 7.1:+3174676 | None:intergenic |
| AAAGCCCGTGGAAAGCATGA+AGG | 0.616163 | 7.1:-3170992 | MS.gene78603:CDS |
| TTGTCGTCTTTCGACCAACA+TGG | 0.625198 | 7.1:-3174670 | MS.gene78603:intron |
| AATTCAATGACAACATCACC+AGG | 0.627515 | 7.1:+3171021 | None:intergenic |
| AGCATTCTTAGTCCAAGCCA+TGG | 0.630955 | 7.1:+3171991 | None:intergenic |
| AGCAGTGACAGTATTCTGAA+GGG | 0.641778 | 7.1:+3172824 | None:intergenic |
| GTTAATATTTCGATTCCACA+AGG | 0.645580 | 7.1:-3174385 | MS.gene78603:intron |
| AGAAAGAGGACAAACCATGT+TGG | 0.646314 | 7.1:+3174656 | None:intergenic |
| GGAACCCAGCACGATCACCA+GGG | 0.647337 | 7.1:+3171046 | None:intergenic |
| GACTTTAACTGTGATTCCGG+AGG | 0.651382 | 7.1:-3170559 | MS.gene78603:CDS |
| ACAGTATTCTGAAGGGAATG+CGG | 0.654266 | 7.1:+3172831 | None:intergenic |
| ATGGCACAGGGAAATTCTGG+AGG | 0.659592 | 7.1:-3172445 | MS.gene78603:intron |
| CAATGACAACATCACCAGGA+CGG | 0.663393 | 7.1:+3171025 | None:intergenic |
| GCCCGTGGAAAGCATGAAGG+AGG | 0.665398 | 7.1:-3170989 | MS.gene78603:intron |
| GCAGGTTATTGAAATGATGG+TGG | 0.673889 | 7.1:-3170637 | MS.gene78603:intron |
| AGTGAACATCATGAAAGTGT+TGG | 0.676552 | 7.1:-3172389 | MS.gene78603:CDS |
| ACATGTCCGAAGAAGGAACA+GGG | 0.682454 | 7.1:+3174512 | None:intergenic |
| TGGCACAGGGAAATTCTGGA+GGG | 0.686679 | 7.1:-3172444 | MS.gene78603:intron |
| AATGATGGTGGACAAAGTTG+GGG | 0.709009 | 7.1:-3170625 | MS.gene78603:CDS |
| ATGTCTAAGGAAACTTCTGG+GGG | 0.710738 | 7.1:-3174493 | MS.gene78603:CDS |
| TGGACGTAACAAATCAAACG+GGG | 0.745894 | 7.1:+3174696 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAGTAAAAGAAAAT+AGG | + | chr7.1:3172921-3172940 | None:intergenic | 10.0% |
| !!! | TTTTTTTATAACAATAACAA+CGG | - | chr7.1:3174333-3174352 | MS.gene78603:intron | 10.0% |
| !! | AAGATAAAATAAAATGATCT+GGG | - | chr7.1:3174761-3174780 | MS.gene78603:CDS | 15.0% |
| !! | TAAGATAAAATAAAATGATC+TGG | - | chr7.1:3174760-3174779 | MS.gene78603:CDS | 15.0% |
| !! | TAATCTTGAAATAAAGTTAA+TGG | - | chr7.1:3170674-3170693 | MS.gene78603:intron | 15.0% |
| !!! | TATTTTCAGAATAATTTTCT+AGG | + | chr7.1:3174102-3174121 | None:intergenic | 15.0% |
| !! | AAAATTACACAAAACATAAG+CGG | + | chr7.1:3174413-3174432 | None:intergenic | 20.0% |
| !! | AATAATCAATTCATCTAACA+TGG | - | chr7.1:3170866-3170885 | MS.gene78603:intron | 20.0% |
| !! | AGATAAAATAAAATGATCTG+GGG | - | chr7.1:3174762-3174781 | MS.gene78603:CDS | 20.0% |
| !! | CAAACTTATACTAATCTTTA+GGG | - | chr7.1:3174830-3174849 | MS.gene78603:intron | 20.0% |
| !! | GATCATAATATATCCATAAA+AGG | + | chr7.1:3173534-3173553 | None:intergenic | 20.0% |
| !! | TGTTAAATCTAACATTGAAA+TGG | + | chr7.1:3172947-3172966 | None:intergenic | 20.0% |
| !!! | AAATTTAAACGTTTTTGACT+AGG | - | chr7.1:3174578-3174597 | MS.gene78603:intron | 20.0% |
| !!! | AGTAAACTTTTTTTCTTTTC+AGG | - | chr7.1:3173634-3173653 | MS.gene78603:intron | 20.0% |
| !!! | ATTTAGAACTGAAAATTTGT+AGG | - | chr7.1:3171095-3171114 | MS.gene78603:intron | 20.0% |
| !!! | CTGATTTTTTAAATGTCTTT+TGG | - | chr7.1:3172971-3172990 | MS.gene78603:intron | 20.0% |
| !!! | TTCATGTATTGTATGATTTT+TGG | - | chr7.1:3173003-3173022 | MS.gene78603:CDS | 20.0% |
| !!! | TTTAGAACTGAAAATTTGTA+GGG | - | chr7.1:3171096-3171115 | MS.gene78603:intron | 20.0% |
| ! | AATTCAATTGTTAGAGTGAT+AGG | + | chr7.1:3172152-3172171 | None:intergenic | 25.0% |
| ! | AGGATGTTAAGAAAGATAAA+GGG | + | chr7.1:3172250-3172269 | None:intergenic | 25.0% |
| ! | ATTACAAATCAAAGAGAAGA+TGG | - | chr7.1:3174221-3174240 | MS.gene78603:CDS | 25.0% |
| ! | CATAATGAAGAATAATCTCA+CGG | + | chr7.1:3174954-3174973 | None:intergenic | 25.0% |
| ! | CATCTAAAGATCGATTAATT+GGG | + | chr7.1:3173787-3173806 | None:intergenic | 25.0% |
| ! | CCAAACTTATACTAATCTTT+AGG | - | chr7.1:3174829-3174848 | MS.gene78603:intron | 25.0% |
| ! | CCTAAAGATTAGTATAAGTT+TGG | + | chr7.1:3174832-3174851 | None:intergenic | 25.0% |
| ! | GTCAATCAAAATTGTTTATG+CGG | + | chr7.1:3173556-3173575 | None:intergenic | 25.0% |
| ! | TATCATGTTACTATCATACT+TGG | - | chr7.1:3174044-3174063 | MS.gene78603:intron | 25.0% |
| ! | TATTAAAAGTGAATGTGGAA+AGG | + | chr7.1:3172184-3172203 | None:intergenic | 25.0% |
| ! | TGGTATATACTAACTAGTTA+TGG | + | chr7.1:3172029-3172048 | None:intergenic | 25.0% |
| ! | TGTAACTATCACAATTAGAT+AGG | + | chr7.1:3174299-3174318 | None:intergenic | 25.0% |
| ! | TTCAGATTGTCACATATAAA+CGG | + | chr7.1:3173455-3173474 | None:intergenic | 25.0% |
| ! | TTCTTGATATCTTATGTTGT+AGG | - | chr7.1:3172414-3172433 | MS.gene78603:CDS | 25.0% |
| ! | TTTGATCTATCAATAAGATG+AGG | + | chr7.1:3174127-3174146 | None:intergenic | 25.0% |
| !! | AAGAAATATATCTTGACTTG+TGG | + | chr7.1:3172049-3172068 | None:intergenic | 25.0% |
| !! | CTTACAATTTTCACCTTTTA+TGG | - | chr7.1:3173518-3173537 | MS.gene78603:intron | 25.0% |
| !! | TTGAGTCTTAAATGATTTTC+AGG | + | chr7.1:3172523-3172542 | None:intergenic | 25.0% |
| !! | TTGATTGACATACTTTTATG+TGG | - | chr7.1:3173567-3173586 | MS.gene78603:intron | 25.0% |
| !!! | ATTGGCTTTGTAGATTTTTA+TGG | - | chr7.1:3171371-3171390 | MS.gene78603:intron | 25.0% |
| !!! | ATTTTTATGGTTTTGCTACA+GGG | - | chr7.1:3171384-3171403 | MS.gene78603:intron | 25.0% |
| !!! | CCACATTCACTTTTAATAAT+GGG | - | chr7.1:3172186-3172205 | MS.gene78603:intron | 25.0% |
| !!! | TCCACATTCACTTTTAATAA+TGG | - | chr7.1:3172185-3172204 | MS.gene78603:intron | 25.0% |
| AACAGATTGTGCAATTAATG+TGG | - | chr7.1:3173091-3173110 | MS.gene78603:intron | 30.0% | |
| AACCATGATATATCTTGCAA+TGG | + | chr7.1:3170933-3170952 | None:intergenic | 30.0% | |
| AACGATTCATTCAGATGAAA+AGG | + | chr7.1:3171309-3171328 | None:intergenic | 30.0% | |
| AAGTGAACACAAAAACAAAG+AGG | - | chr7.1:3174145-3174164 | MS.gene78603:intron | 30.0% | |
| AATATGGATGGAGAAATTGT+TGG | - | chr7.1:3173248-3173267 | MS.gene78603:intron | 30.0% | |
| AATATTGACGATGCATACAA+AGG | - | chr7.1:3170830-3170849 | MS.gene78603:intron | 30.0% | |
| AATGTTGTCTAATCAGAAAG+AGG | + | chr7.1:3174369-3174388 | None:intergenic | 30.0% | |
| ACTTGTAATGAGCTTATGTA+TGG | + | chr7.1:3172305-3172324 | None:intergenic | 30.0% | |
| AGATATATCATGGTTGACAT+TGG | - | chr7.1:3170938-3170957 | MS.gene78603:intron | 30.0% | |
| AGATTTAGTTAATTGCTCAC+TGG | + | chr7.1:3170639-3170658 | None:intergenic | 30.0% | |
| ATAAACTACCCAAGTAGATA+TGG | - | chr7.1:3173140-3173159 | MS.gene78603:intron | 30.0% | |
| ATATAACTGTAGCTTGATAC+TGG | + | chr7.1:3171678-3171697 | None:intergenic | 30.0% | |
| ATATCAAGAACCAATTGTTC+TGG | + | chr7.1:3172404-3172423 | None:intergenic | 30.0% | |
| ATATTGAGAACCAATTGATC+CGG | + | chr7.1:3172461-3172480 | None:intergenic | 30.0% | |
| ATCCATATTCCATATCTACT+TGG | + | chr7.1:3173152-3173171 | None:intergenic | 30.0% | |
| ATCGAAATATTAACAACAGC+AGG | + | chr7.1:3171269-3171288 | None:intergenic | 30.0% | |
| ATCTGTTTGTAAATACTCTC+TGG | + | chr7.1:3173078-3173097 | None:intergenic | 30.0% | |
| ATGAAAATCAACGACAACAT+GGG | + | chr7.1:3171465-3171484 | None:intergenic | 30.0% | |
| ATGATAGTTTATCATGCTGT+AGG | - | chr7.1:3172329-3172348 | MS.gene78603:CDS | 30.0% | |
| ATTAATTGGGAACATACCAT+TGG | + | chr7.1:3173774-3173793 | None:intergenic | 30.0% | |
| CAAGATTAGAGAGAAAATTG+TGG | + | chr7.1:3172217-3172236 | None:intergenic | 30.0% | |
| CATAGATGTAAAATTGTTGC+AGG | - | chr7.1:3175005-3175024 | MS.gene78603:intron | 30.0% | |
| CCCATTATTAAAAGTGAATG+TGG | + | chr7.1:3172189-3172208 | None:intergenic | 30.0% | |
| CTACATGAGTTAGAATAAGA+CGG | - | chr7.1:3172001-3172020 | MS.gene78603:CDS | 30.0% | |
| CTAGGATTCTCACTTTAATA+GGG | + | chr7.1:3174084-3174103 | None:intergenic | 30.0% | |
| CTTGTAATGAGCTTATGTAT+GGG | + | chr7.1:3172304-3172323 | None:intergenic | 30.0% | |
| GAAAGAAAGTTCAACTGTTA+GGG | + | chr7.1:3172111-3172130 | None:intergenic | 30.0% | |
| GAAATAATGTGTTTGTCACA+AGG | - | chr7.1:3174555-3174574 | MS.gene78603:intron | 30.0% | |
| GAGGATGTTAAGAAAGATAA+AGG | + | chr7.1:3172251-3172270 | None:intergenic | 30.0% | |
| GATGTATTTGTGCAAAACTA+AGG | + | chr7.1:3171934-3171953 | None:intergenic | 30.0% | |
| GATGTTGTCATTGAATTTGA+TGG | - | chr7.1:3174645-3174664 | MS.gene78603:intron | 30.0% | |
| GCATCTAAAGATCGATTAAT+TGG | + | chr7.1:3173788-3173807 | None:intergenic | 30.0% | |
| GGAACAATCATTAACAAAGA+TGG | - | chr7.1:3171422-3171441 | MS.gene78603:intron | 30.0% | |
| GTAGATATGGAATATGGATT+TGG | - | chr7.1:3173153-3173172 | MS.gene78603:intron | 30.0% | |
| GTTAATATTTCGATTCCACA+AGG | - | chr7.1:3171275-3171294 | MS.gene78603:intron | 30.0% | |
| GTTACTATCATACTTGGATA+GGG | - | chr7.1:3174050-3174069 | MS.gene78603:intron | 30.0% | |
| TAAAAGTTCAAACCAGAAAG+AGG | + | chr7.1:3171021-3171040 | None:intergenic | 30.0% | |
| TATTATGTTAGTGAAGCCAT+GGG | - | chr7.1:3173994-3174013 | MS.gene78603:intron | 30.0% | |
| TCATTCCCTAATGTCAATAA+GGG | - | chr7.1:3173738-3173757 | MS.gene78603:intron | 30.0% | |
| TCCAAGCAGAAAGTTTAATT+AGG | - | chr7.1:3173489-3173508 | MS.gene78603:intron | 30.0% | |
| TCCATATTCCATATCTACTT+GGG | + | chr7.1:3173151-3173170 | None:intergenic | 30.0% | |
| TCTAACATGGCTTCAAATTT+AGG | - | chr7.1:3170879-3170898 | MS.gene78603:intron | 30.0% | |
| TCTGTTTGTAAATACTCTCT+GGG | + | chr7.1:3173077-3173096 | None:intergenic | 30.0% | |
| TGAAAGAAAGTTCAACTGTT+AGG | + | chr7.1:3172112-3172131 | None:intergenic | 30.0% | |
| TGGTTAATACTTGAGTAGTT+AGG | - | chr7.1:3173587-3173606 | MS.gene78603:intron | 30.0% | |
| TGTTACTATCATACTTGGAT+AGG | - | chr7.1:3174049-3174068 | MS.gene78603:intron | 30.0% | |
| TTATTATGTTAGTGAAGCCA+TGG | - | chr7.1:3173993-3174012 | MS.gene78603:intron | 30.0% | |
| TTCAAAGTTGTTTGCAAAGT+TGG | - | chr7.1:3173891-3173910 | MS.gene78603:intron | 30.0% | |
| TTCAAGACAGTGTACATATT+TGG | + | chr7.1:3171543-3171562 | None:intergenic | 30.0% | |
| TTCATTCCCTAATGTCAATA+AGG | - | chr7.1:3173737-3173756 | MS.gene78603:intron | 30.0% | |
| ! | ATAGAGCATTTCAAGAAAAG+TGG | - | chr7.1:3173344-3173363 | MS.gene78603:intron | 30.0% |
| ! | TAGAGCATTTCAAGAAAAGT+GGG | - | chr7.1:3173345-3173364 | MS.gene78603:intron | 30.0% |
| ! | TCTAGGATTCTCACTTTAAT+AGG | + | chr7.1:3174085-3174104 | None:intergenic | 30.0% |
| ! | TTAATGGCATGCTTTTCAAT+TGG | - | chr7.1:3170690-3170709 | MS.gene78603:intron | 30.0% |
| ! | TTTTCAGAATCTAGATTCAC+AGG | - | chr7.1:3173820-3173839 | MS.gene78603:intron | 30.0% |
| !! | CTTTTAACTACAACCTTCAT+GGG | + | chr7.1:3175063-3175082 | None:intergenic | 30.0% |
| !! | GATTTTTATGGTTTTGCTAC+AGG | - | chr7.1:3171383-3171402 | MS.gene78603:intron | 30.0% |
| !! | TCTTTTAACTACAACCTTCA+TGG | + | chr7.1:3175064-3175083 | None:intergenic | 30.0% |
| !!! | TCGATTTTTTTTACTGTCTG+TGG | + | chr7.1:3174931-3174950 | None:intergenic | 30.0% |
| AAAAGTGAATGTGGAAAGGA+AGG | + | chr7.1:3172180-3172199 | None:intergenic | 35.0% | |
| AAGAAAAGTGGGTATGTTTC+TGG | - | chr7.1:3173356-3173375 | MS.gene78603:intron | 35.0% | |
| AATTCAATGACAACATCACC+AGG | + | chr7.1:3174642-3174661 | None:intergenic | 35.0% | |
| ACATGTCTAAGGAAACTTCT+GGG | - | chr7.1:3171165-3171184 | MS.gene78603:intron | 35.0% | |
| ACCCAAGTAGATATGGAATA+TGG | - | chr7.1:3173147-3173166 | MS.gene78603:intron | 35.0% | |
| ACTGGAATTAGTGTGGTTAT+CGG | + | chr7.1:3170621-3170640 | None:intergenic | 35.0% | |
| ACTGTAACAACCAAACCTTT+AGG | - | chr7.1:3171969-3171988 | MS.gene78603:CDS | 35.0% | |
| AGAATGCCCTTATTGACATT+AGG | + | chr7.1:3173747-3173766 | None:intergenic | 35.0% | |
| AGTTCAACTGTTAGGGTAAA+AGG | + | chr7.1:3172104-3172123 | None:intergenic | 35.0% | |
| AGTTCTCTGTGATGTAAATG+TGG | - | chr7.1:3171595-3171614 | MS.gene78603:intron | 35.0% | |
| ATAGTAGCTCATTTAGCTGT+AGG | - | chr7.1:3172358-3172377 | MS.gene78603:CDS | 35.0% | |
| ATCTACTTGGGTAGTTTATG+CGG | + | chr7.1:3173139-3173158 | None:intergenic | 35.0% | |
| CACATACATCTAAACATGCA+TGG | + | chr7.1:3171071-3171090 | None:intergenic | 35.0% | |
| CATGAAAATCAACGACAACA+TGG | + | chr7.1:3171466-3171485 | None:intergenic | 35.0% | |
| CTAATCAGAAAGAGGAGTAA+GGG | + | chr7.1:3174361-3174380 | None:intergenic | 35.0% | |
| CTTTGTATGACTCAAAGCTA+GGG | - | chr7.1:3171754-3171773 | MS.gene78603:intron | 35.0% | |
| GAAAAGGTAGAAAAACCTTG+TGG | + | chr7.1:3171293-3171312 | None:intergenic | 35.0% | |
| GAAGGTTTGTGTTCAAGAAA+GGG | - | chr7.1:3171508-3171527 | MS.gene78603:intron | 35.0% | |
| GAATGCCCTTATTGACATTA+GGG | + | chr7.1:3173746-3173765 | None:intergenic | 35.0% | |
| GAGCAACACAATGCATATTA+TGG | + | chr7.1:3174508-3174527 | None:intergenic | 35.0% | |
| GATATATCTTGCAATGGCAA+AGG | + | chr7.1:3170927-3170946 | None:intergenic | 35.0% | |
| GATCCATTCCCAACAAAATA+GGG | - | chr7.1:3171835-3171854 | MS.gene78603:intron | 35.0% | |
| GCCTAATTAAACTTTCTGCT+TGG | + | chr7.1:3173493-3173512 | None:intergenic | 35.0% | |
| GCTAAATGAGCTACTATACA+AGG | + | chr7.1:3172355-3172374 | None:intergenic | 35.0% | |
| GTACTTTCTGAGTCATGATT+TGG | - | chr7.1:3171803-3171822 | MS.gene78603:intron | 35.0% | |
| GTTGCAGGTTATTGAAATGA+TGG | - | chr7.1:3175020-3175039 | MS.gene78603:intron | 35.0% | |
| TAATCAGAAAGAGGAGTAAG+GGG | + | chr7.1:3174360-3174379 | None:intergenic | 35.0% | |
| TACACAAAACATAAGCGGAA+TGG | + | chr7.1:3174408-3174427 | None:intergenic | 35.0% | |
| TCTAATCAGAAAGAGGAGTA+AGG | + | chr7.1:3174362-3174381 | None:intergenic | 35.0% | |
| TGATCCATTCCCAACAAAAT+AGG | - | chr7.1:3171834-3171853 | MS.gene78603:intron | 35.0% | |
| TGATGAATCAAAGCCATCTA+AGG | - | chr7.1:3171196-3171215 | MS.gene78603:intron | 35.0% | |
| TGCCATTGCAAGATATATCA+TGG | - | chr7.1:3170928-3170947 | MS.gene78603:intron | 35.0% | |
| TGTGGACGTAACAAATCAAA+CGG | + | chr7.1:3170969-3170988 | None:intergenic | 35.0% | |
| TTGAGATTATGCTGATGGTT+TGG | - | chr7.1:3171345-3171364 | MS.gene78603:intron | 35.0% | |
| TTGCATGTTATCTGCTTGTA+TGG | - | chr7.1:3173196-3173215 | MS.gene78603:intron | 35.0% | |
| TTGTGATAGTTACATGTAGC+AGG | - | chr7.1:3174305-3174324 | MS.gene78603:intron | 35.0% | |
| ! | AAGCAATGCCCTATTTTGTT+GGG | + | chr7.1:3171846-3171865 | None:intergenic | 35.0% |
| ! | AAGCCATCTAAGGATACTTT+TGG | - | chr7.1:3171206-3171225 | MS.gene78603:intron | 35.0% |
| ! | AGTGAACATCATGAAAGTGT+TGG | - | chr7.1:3173271-3173290 | MS.gene78603:intron | 35.0% |
| ! | ATGCAAACGAAACATGCTTT+TGG | + | chr7.1:3171645-3171664 | None:intergenic | 35.0% |
| ! | ATGTGGTAGAAGAGTACAAT+TGG | - | chr7.1:3171612-3171631 | MS.gene78603:intron | 35.0% |
| ! | ATTGAAGTCACTTTGCAAGA+TGG | - | chr7.1:3172658-3172677 | MS.gene78603:intron | 35.0% |
| ! | ATTTTACACACAGAGTCGAT+TGG | + | chr7.1:3173323-3173342 | None:intergenic | 35.0% |
| ! | TAAGCAATGCCCTATTTTGT+TGG | + | chr7.1:3171847-3171866 | None:intergenic | 35.0% |
| ! | TCGTTTTCATTCAGTTCTGT+AGG | + | chr7.1:3171889-3171908 | None:intergenic | 35.0% |
| ! | TGCAAACGAAACATGCTTTT+GGG | + | chr7.1:3171644-3171663 | None:intergenic | 35.0% |
| !! | AAATGATGGTGGACAAAGTT+GGG | - | chr7.1:3175034-3175053 | MS.gene78603:intron | 35.0% |
| !! | ATCCCAAATCACTGCTTTTA+CGG | + | chr7.1:3173043-3173062 | None:intergenic | 35.0% |
| !! | CTACCAAAAGTATCCTTAGA+TGG | + | chr7.1:3171212-3171231 | None:intergenic | 35.0% |
| !! | GTTGATTTTCATGGCACAAA+AGG | - | chr7.1:3171473-3171492 | MS.gene78603:intron | 35.0% |
| !! | TGCTTTCTTTTGCTATGCTT+TGG | - | chr7.1:3173953-3173972 | MS.gene78603:intron | 35.0% |
| !! | TTCTTTTCAGGAGAGTGATA+CGG | - | chr7.1:3173646-3173665 | MS.gene78603:intron | 35.0% |
| !! | TTTTTGACTAGGTAACTCCT+GGG | - | chr7.1:3174589-3174608 | MS.gene78603:intron | 35.0% |
| !!! | CATGTTGTCGTTGATTTTCA+TGG | - | chr7.1:3171464-3171483 | MS.gene78603:intron | 35.0% |
| !!! | CTCTTTTGAGATTATGCTGA+TGG | - | chr7.1:3171340-3171359 | MS.gene78603:intron | 35.0% |
| AAAAGGTTCATCCAAAGGGA+AGG | - | chr7.1:3171490-3171509 | MS.gene78603:intron | 40.0% | |
| AACAACCAAACCTTTAGGTG+AGG | - | chr7.1:3171974-3171993 | MS.gene78603:CDS | 40.0% | |
| AACGACGATTCTGTGAATTC+TGG | - | chr7.1:3171904-3171923 | MS.gene78603:intron | 40.0% | |
| AGAAAGAGGACAAACCATGT+TGG | + | chr7.1:3171007-3171026 | None:intergenic | 40.0% | |
| AGCAGTGACAGTATTCTGAA+GGG | + | chr7.1:3172839-3172858 | None:intergenic | 40.0% | |
| ATGTAGTTGACCTCACCTAA+AGG | + | chr7.1:3171987-3172006 | None:intergenic | 40.0% | |
| ATGTCTAAGGAAACTTCTGG+GGG | - | chr7.1:3171167-3171186 | MS.gene78603:intron | 40.0% | |
| ATTGCTCACTGGAATTAGTG+TGG | + | chr7.1:3170628-3170647 | None:intergenic | 40.0% | |
| CAAGATGGAAGGACATTTGA+GGG | - | chr7.1:3172673-3172692 | MS.gene78603:intron | 40.0% | |
| CACAATGCATATTATGGCAG+AGG | + | chr7.1:3174502-3174521 | None:intergenic | 40.0% | |
| CATGTCTAAGGAAACTTCTG+GGG | - | chr7.1:3171166-3171185 | MS.gene78603:intron | 40.0% | |
| CTGAAAACTCGACAGCAAAA+AGG | + | chr7.1:3172280-3172299 | None:intergenic | 40.0% | |
| GAAGACTAACAACGTTAGCA+GGG | + | chr7.1:3172082-3172101 | None:intergenic | 40.0% | |
| GACAGCAAAAAGGCAAAATG+AGG | + | chr7.1:3172270-3172289 | None:intergenic | 40.0% | |
| GACATGTCTAAGGAAACTTC+TGG | - | chr7.1:3171164-3171183 | MS.gene78603:intron | 40.0% | |
| GACCGTAAAAGCAGTGATTT+GGG | - | chr7.1:3173038-3173057 | MS.gene78603:intron | 40.0% | |
| GCACAAAAGGTTCATCCAAA+GGG | - | chr7.1:3171486-3171505 | MS.gene78603:intron | 40.0% | |
| GCAGGTTATTGAAATGATGG+TGG | - | chr7.1:3175023-3175042 | MS.gene78603:intron | 40.0% | |
| GCTTTGTATGACTCAAAGCT+AGG | - | chr7.1:3171753-3171772 | MS.gene78603:intron | 40.0% | |
| GGAAGGTTTGTGTTCAAGAA+AGG | - | chr7.1:3171507-3171526 | MS.gene78603:intron | 40.0% | |
| GGTGCGAAGATAAAACTTTC+TGG | - | chr7.1:3172869-3172888 | MS.gene78603:CDS | 40.0% | |
| GTGGACGTAACAAATCAAAC+GGG | + | chr7.1:3170968-3170987 | None:intergenic | 40.0% | |
| TCTACTTGGGTAGTTTATGC+GGG | + | chr7.1:3173138-3173157 | None:intergenic | 40.0% | |
| TCTCCATCCATATTGACAAG+TGG | + | chr7.1:3173242-3173261 | None:intergenic | 40.0% | |
| TCTGATGTCTTCATTTCACG+AGG | + | chr7.1:3172608-3172627 | None:intergenic | 40.0% | |
| TGACCGTAAAAGCAGTGATT+TGG | - | chr7.1:3173037-3173056 | MS.gene78603:intron | 40.0% | |
| TGCGACTTTAACTGTGATTC+CGG | - | chr7.1:3175098-3175117 | MS.gene78603:CDS | 40.0% | |
| TGGACGTAACAAATCAAACG+GGG | + | chr7.1:3170967-3170986 | None:intergenic | 40.0% | |
| TGGCTGTAAAAGATGTCTCT+TGG | - | chr7.1:3172889-3172908 | MS.gene78603:intron | 40.0% | |
| TTATCTGCTTGTATGGCACA+GGG | - | chr7.1:3173203-3173222 | MS.gene78603:intron | 40.0% | |
| TTCACAGGACAGTATCTTCA+TGG | - | chr7.1:3173835-3173854 | MS.gene78603:intron | 40.0% | |
| TTGAACACAAACCTTCCCTT+TGG | + | chr7.1:3171504-3171523 | None:intergenic | 40.0% | |
| ! | AACATGGTTTGTCCTCTTTC+TGG | - | chr7.1:3171006-3171025 | MS.gene78603:CDS | 40.0% |
| ! | AAGTCACTTTGCAAGATGGA+AGG | - | chr7.1:3172662-3172681 | MS.gene78603:intron | 40.0% |
| ! | ACAGTATTCTGAAGGGAATG+CGG | + | chr7.1:3172832-3172851 | None:intergenic | 40.0% |
| ! | AGCAGTGATTTGGGATTTAG+TGG | - | chr7.1:3173047-3173066 | MS.gene78603:intron | 40.0% |
| ! | ATGCCCTATTTTGTTGGGAA+TGG | + | chr7.1:3171841-3171860 | None:intergenic | 40.0% |
| ! | ATGCTGATGGTTTGGAGTAT+TGG | - | chr7.1:3171353-3171372 | MS.gene78603:intron | 40.0% |
| ! | CAAAGCTTGGTTCTTCAACT+AGG | - | chr7.1:3172770-3172789 | MS.gene78603:intron | 40.0% |
| ! | TTTGCTACAGGGAAGAGTAT+TGG | - | chr7.1:3171395-3171414 | MS.gene78603:intron | 40.0% |
| !! | AATGATGGTGGACAAAGTTG+GGG | - | chr7.1:3175035-3175054 | MS.gene78603:intron | 40.0% |
| !! | GAAATGATGGTGGACAAAGT+TGG | - | chr7.1:3175033-3175052 | MS.gene78603:intron | 40.0% |
| !! | GTTTTTGACTAGGTAACTCC+TGG | - | chr7.1:3174588-3174607 | MS.gene78603:intron | 40.0% |
| !! | TAAGGGCATTCTTGTACCAA+TGG | - | chr7.1:3173755-3173774 | MS.gene78603:intron | 40.0% |
| !! | TTGTATAGTAGCTTGCTTGC+CGG | - | chr7.1:3172439-3172458 | MS.gene78603:CDS | 40.0% |
| AAGCTGAGATTGGATTCCTC+CGG | + | chr7.1:3175120-3175139 | None:intergenic | 45.0% | |
| ACACACAGAGTCGATTGGTA+CGG | + | chr7.1:3173318-3173337 | None:intergenic | 45.0% | |
| ACATGTCCGAAGAAGGAACA+GGG | + | chr7.1:3171151-3171170 | None:intergenic | 45.0% | |
| AGCATTCTTAGTCCAAGCCA+TGG | + | chr7.1:3173672-3173691 | None:intergenic | 45.0% | |
| AGGGTGGCTTAAGATCTGAT+GGG | - | chr7.1:3171773-3171792 | MS.gene78603:intron | 45.0% | |
| AGTGAATGTGGAAAGGAAGG+AGG | + | chr7.1:3172177-3172196 | None:intergenic | 45.0% | |
| AGTTAGCCCTGTTCCTTCTT+CGG | - | chr7.1:3171142-3171161 | MS.gene78603:intron | 45.0% | |
| CAATGACAACATCACCAGGA+CGG | + | chr7.1:3174638-3174657 | None:intergenic | 45.0% | |
| CAGCAGTGACAGTATTCTGA+AGG | + | chr7.1:3172840-3172859 | None:intergenic | 45.0% | |
| CTGTCACTGCTGGTATTGTA+AGG | - | chr7.1:3172848-3172867 | MS.gene78603:CDS | 45.0% | |
| CTTCAGAATACTGTCACTGC+TGG | - | chr7.1:3172838-3172857 | MS.gene78603:CDS | 45.0% | |
| GAAGAACCAAGCTTTGCTTC+CGG | + | chr7.1:3172766-3172785 | None:intergenic | 45.0% | |
| GAAGGACATTTGAGGGAAAG+TGG | - | chr7.1:3172680-3172699 | MS.gene78603:intron | 45.0% | |
| GACTTTAACTGTGATTCCGG+AGG | - | chr7.1:3175101-3175120 | MS.gene78603:CDS | 45.0% | |
| GATCTGGGGAGCAAAACAAT+TGG | - | chr7.1:3174776-3174795 | MS.gene78603:intron | 45.0% | |
| GCAAATGCTGCTGCTAAAGT+TGG | - | chr7.1:3171242-3171261 | MS.gene78603:intron | 45.0% | |
| GCAAGATGGAAGGACATTTG+AGG | - | chr7.1:3172672-3172691 | MS.gene78603:intron | 45.0% | |
| GGAAGACTAACAACGTTAGC+AGG | + | chr7.1:3172083-3172102 | None:intergenic | 45.0% | |
| GGCAAGCAAGCTACTATACA+AGG | + | chr7.1:3172440-3172459 | None:intergenic | 45.0% | |
| GGCACAAAAGGTTCATCCAA+AGG | - | chr7.1:3171485-3171504 | MS.gene78603:intron | 45.0% | |
| GTTATCTGCTTGTATGGCAC+AGG | - | chr7.1:3173202-3173221 | MS.gene78603:intron | 45.0% | |
| GTTGACCTCACCTAAAGGTT+TGG | + | chr7.1:3171982-3172001 | None:intergenic | 45.0% | |
| TACCTCCTTCATGCTTTCCA+CGG | + | chr7.1:3174676-3174695 | None:intergenic | 45.0% | |
| TACTGTTCTTGCTTGGTCTG+TGG | - | chr7.1:3171731-3171750 | MS.gene78603:intron | 45.0% | |
| TAGGGTGGCTTAAGATCTGA+TGG | - | chr7.1:3171772-3171791 | MS.gene78603:intron | 45.0% | |
| TATGTTAGTGAAGCCATGGG+CGG | - | chr7.1:3173997-3174016 | MS.gene78603:intron | 45.0% | |
| TCCTTAGACATGTCCGAAGA+AGG | + | chr7.1:3171158-3171177 | None:intergenic | 45.0% | |
| TCCTTCTTCGGACATGTCTA+AGG | - | chr7.1:3171154-3171173 | MS.gene78603:intron | 45.0% | |
| TGAATTTGATGGAAAGCCCG+TGG | - | chr7.1:3174656-3174675 | MS.gene78603:intron | 45.0% | |
| TGGGTAGTTTATGCGGGAAA+AGG | + | chr7.1:3173132-3173151 | None:intergenic | 45.0% | |
| TGGTCGAAAGACGACAAATG+TGG | + | chr7.1:3170987-3171006 | None:intergenic | 45.0% | |
| TGTATGACTCAAAGCTAGGG+TGG | - | chr7.1:3171757-3171776 | MS.gene78603:intron | 45.0% | |
| TGTATGGCACAGGGAAATTC+TGG | - | chr7.1:3173212-3173231 | MS.gene78603:intron | 45.0% | |
| TTGTCGTCTTTCGACCAACA+TGG | - | chr7.1:3170990-3171009 | MS.gene78603:CDS | 45.0% | |
| ! | AGCTTGCTTGCCAGAACAAT+TGG | - | chr7.1:3172391-3172410 | MS.gene78603:CDS | 45.0% |
| ! | CATTGTGTTGCTCAAATGCG+AGG | - | chr7.1:3174515-3174534 | MS.gene78603:CDS | 45.0% |
| ! | GAAGTGCTACTGTTCTTGCT+TGG | - | chr7.1:3171724-3171743 | MS.gene78603:intron | 45.0% |
| !! | AATTCTGAAACCCCCACTTC+CGG | - | chr7.1:3172744-3172763 | MS.gene78603:intron | 45.0% |
| !! | ATGAAAGTGTTGGCTGCTGA+TGG | - | chr7.1:3173281-3173300 | MS.gene78603:intron | 45.0% |
| !! | TGAAAGTGTTGGCTGCTGAT+GGG | - | chr7.1:3173282-3173301 | MS.gene78603:intron | 45.0% |
| AACGATACCCACAGCTCCAA+CGG | + | chr7.1:3170573-3170592 | None:intergenic | 50.0% | |
| AAGCTTTGCTTCCGGAAGTG+GGG | + | chr7.1:3172758-3172777 | None:intergenic | 50.0% | |
| ACCTCCTTCATGCTTTCCAC+GGG | + | chr7.1:3174675-3174694 | None:intergenic | 50.0% | |
| ATGGCACAGGGAAATTCTGG+AGG | - | chr7.1:3173215-3173234 | MS.gene78603:intron | 50.0% | |
| ATGGCTATTACCCAATCCCC+GGG | + | chr7.1:3172802-3172821 | None:intergenic | 50.0% | |
| CAAGCTTTGCTTCCGGAAGT+GGG | + | chr7.1:3172759-3172778 | None:intergenic | 50.0% | |
| CATGGCTATTACCCAATCCC+CGG | + | chr7.1:3172803-3172822 | None:intergenic | 50.0% | |
| GACATGTCCGAAGAAGGAAC+AGG | + | chr7.1:3171152-3171171 | None:intergenic | 50.0% | |
| GGGCCACTTGTCAATATGGA+TGG | - | chr7.1:3173236-3173255 | MS.gene78603:intron | 50.0% | |
| GGGGATTGGGTAATAGCCAT+GGG | - | chr7.1:3172802-3172821 | MS.gene78603:intron | 50.0% | |
| GTAGAAGTTTGAACCGCCCA+TGG | + | chr7.1:3174013-3174032 | None:intergenic | 50.0% | |
| TAGGAACGTTCGTACGTGTG+CGG | - | chr7.1:3170898-3170917 | MS.gene78603:intron | 50.0% | |
| TCTTCAACTAGGCTTCGTCC+CGG | - | chr7.1:3172781-3172800 | MS.gene78603:intron | 50.0% | |
| TGGAGGGCCACTTGTCAATA+TGG | - | chr7.1:3173232-3173251 | MS.gene78603:intron | 50.0% | |
| TGGCACAGGGAAATTCTGGA+GGG | - | chr7.1:3173216-3173235 | MS.gene78603:intron | 50.0% | |
| TTGAACAGAAGCTCTGCCGT+TGG | - | chr7.1:3170554-3170573 | MS.gene78603:CDS | 50.0% | |
| ! | AAAGCCCGTGGAAAGCATGA+AGG | - | chr7.1:3174668-3174687 | MS.gene78603:intron | 50.0% |
| ! | AGCTTGCTTGCCGGATCAAT+TGG | - | chr7.1:3172448-3172467 | MS.gene78603:intron | 50.0% |
| !! | ACAGGGAAGAGTATTGGCTC+TGG | - | chr7.1:3171401-3171420 | MS.gene78603:intron | 50.0% |
| AAGGGAATGCGGACAACCCA+TGG | + | chr7.1:3172821-3172840 | None:intergenic | 55.0% | |
| AGAGTGATACGGCCATGGCT+TGG | - | chr7.1:3173657-3173676 | MS.gene78603:intron | 55.0% | |
| AGCTTTGCTTCCGGAAGTGG+GGG | + | chr7.1:3172757-3172776 | None:intergenic | 55.0% | |
| CCAAGCTTTGCTTCCGGAAG+TGG | + | chr7.1:3172760-3172779 | None:intergenic | 55.0% | |
| CCACTTCCGGAAGCAAAGCT+TGG | - | chr7.1:3172757-3172776 | MS.gene78603:intron | 55.0% | |
| CGGGGATTGGGTAATAGCCA+TGG | - | chr7.1:3172801-3172820 | MS.gene78603:intron | 55.0% | |
| CTTCAACTAGGCTTCGTCCC+GGG | - | chr7.1:3172782-3172801 | MS.gene78603:intron | 55.0% | |
| TCAGGAGAGTGATACGGCCA+TGG | - | chr7.1:3173652-3173671 | MS.gene78603:intron | 55.0% | |
| TTCAACTAGGCTTCGTCCCG+GGG | - | chr7.1:3172783-3172802 | MS.gene78603:intron | 55.0% | |
| ! | CAAAGTTGGGGTGCCCATGA+AGG | - | chr7.1:3175047-3175066 | MS.gene78603:CDS | 55.0% |
| ! | GCTGTGGGTATCGTTGCTGT+TGG | - | chr7.1:3170578-3170597 | MS.gene78603:CDS | 55.0% |
| !! | AGTGTTGGCTGCTGATGGGT+TGG | - | chr7.1:3173286-3173305 | MS.gene78603:intron | 55.0% |
| !! | GTGTTGGCTGCTGATGGGTT+GGG | - | chr7.1:3173287-3173306 | MS.gene78603:intron | 55.0% |
| AAGCTCTGCCGTTGGAGCTG+TGG | - | chr7.1:3170562-3170581 | MS.gene78603:CDS | 60.0% | |
| AGCTCTGCCGTTGGAGCTGT+GGG | - | chr7.1:3170563-3170582 | MS.gene78603:CDS | 60.0% | |
| GAACCCAGCACGATCACCAG+GGG | + | chr7.1:3174616-3174635 | None:intergenic | 60.0% | |
| GGAACCCAGCACGATCACCA+GGG | + | chr7.1:3174617-3174636 | None:intergenic | 60.0% | |
| TAGGCTTCGTCCCGGGGATT+GGG | - | chr7.1:3172789-3172808 | MS.gene78603:intron | 60.0% | |
| TAGGTAACTCCTGGGTCCCC+TGG | - | chr7.1:3174597-3174616 | MS.gene78603:intron | 60.0% | |
| ! | GCCCGTGGAAAGCATGAAGG+AGG | - | chr7.1:3174671-3174690 | MS.gene78603:CDS | 60.0% |
| CGGAACCCAGCACGATCACC+AGG | + | chr7.1:3174618-3174637 | None:intergenic | 65.0% | |
| CTAGGCTTCGTCCCGGGGAT+TGG | - | chr7.1:3172788-3172807 | MS.gene78603:intron | 65.0% | |
| GATCGTGCTGGGTTCCGTCC+TGG | - | chr7.1:3174621-3174640 | MS.gene78603:intron | 65.0% | |
| GGTCCCCTGGTGATCGTGCT+GGG | - | chr7.1:3174610-3174629 | MS.gene78603:intron | 65.0% | |
| GCACGATCACCAGGGGACCC+AGG | + | chr7.1:3174609-3174628 | None:intergenic | 70.0% | |
| GGGTCCCCTGGTGATCGTGC+TGG | - | chr7.1:3174609-3174628 | MS.gene78603:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3170539 | 3175143 | 3170539 | ID=MS.gene78603 |
| chr7.1 | mRNA | 3170539 | 3175143 | 3170539 | ID=MS.gene78603.t1;Parent=MS.gene78603 |
| chr7.1 | exon | 3175044 | 3175143 | 3175044 | ID=MS.gene78603.t1.exon1;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3175044 | 3175143 | 3175044 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3174671 | 3174781 | 3174671 | ID=MS.gene78603.t1.exon2;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3174671 | 3174781 | 3174671 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3174386 | 3174565 | 3174386 | ID=MS.gene78603.t1.exon3;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3174386 | 3174565 | 3174386 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3174171 | 3174298 | 3174171 | ID=MS.gene78603.t1.exon4;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3174171 | 3174298 | 3174171 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3172981 | 3173024 | 3172981 | ID=MS.gene78603.t1.exon5;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3172981 | 3173024 | 3172981 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3172813 | 3172890 | 3172813 | ID=MS.gene78603.t1.exon6;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3172813 | 3172890 | 3172813 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3172570 | 3172651 | 3172570 | ID=MS.gene78603.t1.exon7;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3172570 | 3172651 | 3172570 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3172316 | 3172458 | 3172316 | ID=MS.gene78603.t1.exon8;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3172316 | 3172458 | 3172316 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3171906 | 3172026 | 3171906 | ID=MS.gene78603.t1.exon9;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3171906 | 3172026 | 3171906 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3170990 | 3171082 | 3170990 | ID=MS.gene78603.t1.exon10;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3170990 | 3171082 | 3170990 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| chr7.1 | exon | 3170539 | 3170655 | 3170539 | ID=MS.gene78603.t1.exon11;Parent=MS.gene78603.t1 |
| chr7.1 | CDS | 3170539 | 3170655 | 3170539 | ID=cds.MS.gene78603.t1;Parent=MS.gene78603.t1 |
| Gene Sequence |
| Protein sequence |
