Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78725.t1 | XP_003614408.1 | 97 | 432 | 12 | 1 | 1 | 432 | 115 | 545 | 6.40E-226 | 793.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78725.t1 | G7JX25 | 97.0 | 432 | 12 | 1 | 1 | 432 | 115 | 545 | 4.6e-226 | 793.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053917 | MS.gene78725 | 0.964394 | 2.85E-123 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78725.t1 | MTR_5g053260 | 96.991 | 432 | 12 | 1 | 1 | 432 | 115 | 545 | 0.0 | 852 |
| MS.gene78725.t1 | MTR_6g053740 | 33.418 | 392 | 253 | 4 | 41 | 427 | 427 | 815 | 1.69e-61 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78725.t1 | AT3G25680 | 53.350 | 403 | 180 | 2 | 33 | 432 | 161 | 558 | 1.36e-145 | 426 |
| MS.gene78725.t1 | AT5G23890 | 33.077 | 390 | 254 | 2 | 41 | 427 | 300 | 685 | 2.32e-62 | 216 |
| MS.gene78725.t1 | AT5G23890 | 33.162 | 389 | 253 | 2 | 41 | 426 | 424 | 808 | 9.92e-62 | 215 |
| MS.gene78725.t1 | AT5G52410 | 31.606 | 386 | 253 | 4 | 46 | 426 | 232 | 611 | 3.55e-55 | 195 |
| MS.gene78725.t1 | AT5G52410 | 31.606 | 386 | 253 | 4 | 46 | 426 | 241 | 620 | 4.27e-55 | 195 |
| MS.gene78725.t1 | AT5G52410 | 31.818 | 374 | 244 | 4 | 58 | 426 | 2 | 369 | 2.39e-54 | 189 |
Find 86 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATCTCAGGGAGTTTATT+TGG | 0.155851 | 5.4:+42349219 | MS.gene78725:CDS |
| CATTTCACGACAAGATTTAA+TGG | 0.194973 | 5.4:+42349000 | MS.gene78725:CDS |
| CCTTGAATAGACTGAAAATC+TGG | 0.271321 | 5.4:-42348690 | None:intergenic |
| GAGGAGACATACAGAAGTTT+TGG | 0.278868 | 5.4:+42350869 | MS.gene78725:CDS |
| CTCAGCTTCTAGCGTGGATT+TGG | 0.326760 | 5.4:-42351184 | None:intergenic |
| AGTGGAGCAATCCTGTGTTT+TGG | 0.332072 | 5.4:-42348612 | None:intergenic |
| CCTTGAGGCAGCAAACAATT+TGG | 0.339048 | 5.4:+42350945 | MS.gene78725:CDS |
| GCCGCTTGTGCTATTGTTGA+AGG | 0.359144 | 5.4:-42350727 | None:intergenic |
| GGAATACAAATTCACCTATC+AGG | 0.364209 | 5.4:-42348904 | None:intergenic |
| AGACTGACAATGCTTCTTCT+TGG | 0.368656 | 5.4:-42347717 | None:intergenic |
| TACATATATGACTCTCTCTA+AGG | 0.376649 | 5.4:-42351094 | None:intergenic |
| GCTCCACTTGTATCCTTGTC+TGG | 0.379649 | 5.4:+42348627 | MS.gene78725:CDS |
| TGGGTGGAATCAGCTGAAAC+AGG | 0.383185 | 5.4:-42347697 | None:intergenic |
| TGGAGAACTCAGTTGGAGTA+TGG | 0.383408 | 5.4:+42349025 | MS.gene78725:CDS |
| CCATCTAGCAAACTGTCTTC+TGG | 0.383942 | 5.4:-42348451 | None:intergenic |
| GCTATTGTTGAAGGTTTGTT+TGG | 0.388614 | 5.4:-42350718 | None:intergenic |
| GACTGACAATGCTTCTTCTT+GGG | 0.391354 | 5.4:-42347716 | None:intergenic |
| CTCTTCTGTCTCAGCTTGCC+TGG | 0.404837 | 5.4:-42350824 | None:intergenic |
| CAAGAACAGCAGCACGGGCT+TGG | 0.419286 | 5.4:-42352204 | None:intergenic |
| AGGTAGGGCGAAGATGGAAA+TGG | 0.431659 | 5.4:+42352230 | MS.gene78725:CDS |
| GTCAGTCTTAAAGAAGTTGA+AGG | 0.433222 | 5.4:+42347732 | MS.gene78725:CDS |
| CCAGAAGACAGTTTGCTAGA+TGG | 0.436376 | 5.4:+42348451 | MS.gene78725:CDS |
| ACTCTTCCAAGATAATTTGC+TGG | 0.438432 | 5.4:-42348833 | None:intergenic |
| AGCTGTGGTGGTGGAGGAGG+AGG | 0.439710 | 5.4:+42345599 | MS.gene78725:CDS |
| GCTGCTGTTCTTGCTGAGGT+AGG | 0.441580 | 5.4:+42352214 | MS.gene78725:CDS |
| AAGAAGCTCTTCAGATGCTT+AGG | 0.444868 | 5.4:+42351208 | MS.gene78725:CDS |
| CAGAACTTGGGTGGAGGATG+AGG | 0.446384 | 5.4:+42352171 | MS.gene78725:intron |
| TGTGAAAGAGATAACATCTC+AGG | 0.453337 | 5.4:+42349207 | MS.gene78725:CDS |
| GTTTATTTGGACATGTTGGC+AGG | 0.460200 | 5.4:+42349232 | MS.gene78725:CDS |
| TTGCTGAGGTAGGGCGAAGA+TGG | 0.461789 | 5.4:+42352224 | MS.gene78725:CDS |
| CTCTTCCAAGATAATTTGCT+GGG | 0.466661 | 5.4:-42348832 | None:intergenic |
| AATTAAATTAAATTCGTCGT+TGG | 0.466853 | 5.4:+42348476 | MS.gene78725:CDS |
| CAAAGCTGTGGTGGTGGAGG+AGG | 0.470832 | 5.4:+42345596 | MS.gene78725:CDS |
| GAAGAAGCCGTTATACAAAC+TGG | 0.482672 | 5.4:+42345642 | MS.gene78725:CDS |
| CTGTGGCTCTGACAAGTGGC+AGG | 0.483399 | 5.4:+42350749 | MS.gene78725:CDS |
| AACAATAGCACAAGCGGCTG+TGG | 0.484660 | 5.4:+42350732 | MS.gene78725:CDS |
| TTGGACATGTTGGCAGGAGA+TGG | 0.489679 | 5.4:+42349238 | MS.gene78725:CDS |
| CACGACAAGATTTAATGGAA+TGG | 0.501939 | 5.4:+42349005 | MS.gene78725:CDS |
| TCTTGGAAGAGTAGTTCAAA+TGG | 0.502257 | 5.4:+42348844 | MS.gene78725:CDS |
| CTGCTGTTCTTGCTGAGGTA+GGG | 0.507600 | 5.4:+42352215 | MS.gene78725:CDS |
| AATTAAATTCGTCGTTGGAA+AGG | 0.507607 | 5.4:+42348481 | MS.gene78725:CDS |
| GACGTGCCTACATTCAAGCT+TGG | 0.508002 | 5.4:-42352258 | None:intergenic |
| TGGTCCCCAGCAAATTATCT+TGG | 0.509239 | 5.4:+42348827 | MS.gene78725:CDS |
| CTCAGCAAGAACAGCAGCAC+GGG | 0.513282 | 5.4:-42352209 | None:intergenic |
| ATCAGAAACTACTGAAAAGC+CGG | 0.517346 | 5.4:+42347660 | MS.gene78725:intron |
| TTTAAAAGAACAGGCAGCAA+TGG | 0.526108 | 5.4:+42351008 | MS.gene78725:CDS |
| TTGCTTACCAGTTTGTATAA+CGG | 0.527887 | 5.4:-42345649 | None:intergenic |
| GCTAAAGTCTTGGCAGAAGC+CGG | 0.530324 | 5.4:+42348802 | MS.gene78725:intron |
| GGGAGTTTATTTGGACATGT+TGG | 0.530766 | 5.4:+42349228 | MS.gene78725:CDS |
| AATGGAATGGAGAACTCAGT+TGG | 0.531803 | 5.4:+42349018 | MS.gene78725:CDS |
| AGACAAAGCTGTGGTGGTGG+AGG | 0.532022 | 5.4:+42345593 | MS.gene78725:CDS |
| TTTCTTTGGGATAATCGACC+AGG | 0.543294 | 5.4:+42349051 | MS.gene78725:CDS |
| CCAAATTGTTTGCTGCCTCA+AGG | 0.545169 | 5.4:-42350945 | None:intergenic |
| GGTAGGGCGAAGATGGAAAT+GGG | 0.546029 | 5.4:+42352231 | MS.gene78725:CDS |
| ACAGGGATTGTAATTCGTGC+CGG | 0.547208 | 5.4:-42347679 | None:intergenic |
| AAAACTTCTGTATGTCTCCT+CGG | 0.550389 | 5.4:-42350867 | None:intergenic |
| CTTGAATAGACTGAAAATCT+GGG | 0.551420 | 5.4:-42348689 | None:intergenic |
| ACCTTCAACAATAGCACAAG+CGG | 0.555134 | 5.4:+42350726 | MS.gene78725:CDS |
| TGACAATGCTTCTTCTTGGG+TGG | 0.559213 | 5.4:-42347713 | None:intergenic |
| TGAGTTGGGCAGAACTTGGG+TGG | 0.572374 | 5.4:+42352162 | MS.gene78725:intron |
| TCGAGACAAAGCTGTGGTGG+TGG | 0.572806 | 5.4:+42345590 | MS.gene78725:CDS |
| ACTACAATTACCACCACTCA+TGG | 0.573941 | 5.4:+42345564 | MS.gene78725:CDS |
| TTGTATAACGGCTTCTTCAG+CGG | 0.575616 | 5.4:-42345637 | None:intergenic |
| TTCTTTCTCAGCTTCTAGCG+TGG | 0.584584 | 5.4:-42351190 | None:intergenic |
| GCGGCTGTGGCTCTGACAAG+TGG | 0.587899 | 5.4:+42350745 | MS.gene78725:CDS |
| GTTGGGCAGAACTTGGGTGG+AGG | 0.589062 | 5.4:+42352165 | MS.gene78725:intron |
| GTCTCGATCACCATGAGTGG+TGG | 0.602728 | 5.4:-42345574 | None:intergenic |
| CTAGATAGTTGAAGATGATG+TGG | 0.607544 | 5.4:+42348410 | MS.gene78725:intron |
| TATAACGGCTTCTTCAGCGG+TGG | 0.612339 | 5.4:-42345634 | None:intergenic |
| GAGCCAGACAAGGATACAAG+TGG | 0.613465 | 5.4:-42348630 | None:intergenic |
| CTTCCAGAAATCCAAAACAC+AGG | 0.614162 | 5.4:+42348601 | MS.gene78725:intron |
| CCTCAGCAAGAACAGCAGCA+CGG | 0.616599 | 5.4:-42352210 | None:intergenic |
| GGGTGGAATCAGCTGAAACA+GGG | 0.621108 | 5.4:-42347696 | None:intergenic |
| CCGTGCTGCTGTTCTTGCTG+AGG | 0.622982 | 5.4:+42352210 | MS.gene78725:CDS |
| TAGAAGCTGAGAATTCTGCC+AGG | 0.623746 | 5.4:+42350806 | MS.gene78725:CDS |
| TAATTTGCTGGGGACCACAC+CGG | 0.626078 | 5.4:-42348821 | None:intergenic |
| AGATCTGAGCTGCTTAGCCG+AGG | 0.628615 | 5.4:+42350850 | MS.gene78725:CDS |
| TGTGGAGAGGCTTTACCTTG+AGG | 0.631582 | 5.4:+42350930 | MS.gene78725:CDS |
| ATCACGGTTCTGATGTGGAG+AGG | 0.639626 | 5.4:+42350917 | MS.gene78725:CDS |
| GTGAAAGAGATAACATCTCA+GGG | 0.644252 | 5.4:+42349208 | MS.gene78725:CDS |
| TTTGTCTCGATCACCATGAG+TGG | 0.646744 | 5.4:-42345577 | None:intergenic |
| AGTCTTGGCAGAAGCCGGTG+TGG | 0.663623 | 5.4:+42348807 | MS.gene78725:intron |
| ATTATCTACAGAGCCAGACA+AGG | 0.678957 | 5.4:-42348640 | None:intergenic |
| TCTTCCAAGATAATTTGCTG+GGG | 0.686580 | 5.4:-42348831 | None:intergenic |
| TGATCGAGACAAAGCTGTGG+TGG | 0.689347 | 5.4:+42345587 | MS.gene78725:CDS |
| TGGTGATCGAGACAAAGCTG+TGG | 0.768511 | 5.4:+42345584 | MS.gene78725:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTAAAAACTACTATT+AGG | + | chr5.4:42346614-42346633 | MS.gene78725:intron | 10.0% |
| !!! | ATTTCATTTTTTTAATTGAT+AGG | + | chr5.4:42350230-42350249 | MS.gene78725:intron | 10.0% |
| !!! | TTCTTTATCTTTTTTTTTTT+AGG | - | chr5.4:42351588-42351607 | None:intergenic | 10.0% |
| !! | TATATTATTGAATTCAATGA+GGG | + | chr5.4:42349425-42349444 | MS.gene78725:intron | 15.0% |
| !!! | ATATTTTCTGTTTAAGATTA+AGG | + | chr5.4:42347573-42347592 | MS.gene78725:intron | 15.0% |
| !!! | GAATGGTTTTTATATATATA+AGG | + | chr5.4:42347768-42347787 | MS.gene78725:intron | 15.0% |
| !!! | TAATTTTTAAATATGCATGA+TGG | + | chr5.4:42349104-42349123 | MS.gene78725:intron | 15.0% |
| !!! | TCTTTTTTAACAATATCAAA+TGG | + | chr5.4:42350452-42350471 | MS.gene78725:intron | 15.0% |
| !!! | TGTAAACATCAAATTTTATT+CGG | + | chr5.4:42346954-42346973 | MS.gene78725:intron | 15.0% |
| !!! | TTATATTTTTCTCTAATTAG+AGG | + | chr5.4:42349935-42349954 | MS.gene78725:intron | 15.0% |
| !! | AAAAAAAGGATGAAGATATT+TGG | - | chr5.4:42347631-42347650 | None:intergenic | 20.0% |
| !! | AAAAAGATAAAGAAACAACA+TGG | + | chr5.4:42351594-42351613 | MS.gene78725:intron | 20.0% |
| !! | AAACAATTTATATTCAGTTG+TGG | - | chr5.4:42352068-42352087 | None:intergenic | 20.0% |
| !! | AATTAAATTAAATTCGTCGT+TGG | + | chr5.4:42348476-42348495 | MS.gene78725:CDS | 20.0% |
| !! | AGCCTAAAAGATAAAATAAT+AGG | - | chr5.4:42350597-42350616 | None:intergenic | 20.0% |
| !! | ATTAGAGAAAAATATAAGAG+AGG | - | chr5.4:42349932-42349951 | None:intergenic | 20.0% |
| !! | ATTCAAGGTAATAAAAGTTA+TGG | + | chr5.4:42348705-42348724 | MS.gene78725:intron | 20.0% |
| !! | CTTAAACAGAAATTATCAAA+AGG | - | chr5.4:42351702-42351721 | None:intergenic | 20.0% |
| !! | GTATATTATTGAATTCAATG+AGG | + | chr5.4:42349424-42349443 | MS.gene78725:intron | 20.0% |
| !! | TATAAGAGAAACTATTAAGA+AGG | + | chr5.4:42347402-42347421 | MS.gene78725:intron | 20.0% |
| !! | TATTGAGATGTCATTATATT+TGG | + | chr5.4:42347900-42347919 | MS.gene78725:intron | 20.0% |
| !! | TTAAATAGCAACCATATTTA+GGG | + | chr5.4:42346716-42346735 | MS.gene78725:intron | 20.0% |
| !! | TTAGAGAAAAATATAAGAGA+GGG | - | chr5.4:42349931-42349950 | None:intergenic | 20.0% |
| !!! | ACATAATTTTTTTTCCTGAT+AGG | + | chr5.4:42348890-42348909 | MS.gene78725:CDS | 20.0% |
| !!! | ACATTTAATTCTAGTTCAAA+TGG | + | chr5.4:42346993-42347012 | MS.gene78725:intron | 20.0% |
| !!! | AGAATATTTTCTGTTAGAAA+TGG | - | chr5.4:42349515-42349534 | None:intergenic | 20.0% |
| !!! | ATATTCTTTTCATTACTTTC+AGG | + | chr5.4:42346513-42346532 | MS.gene78725:intron | 20.0% |
| !!! | ATTATTTTATCTTTTAGGCT+AGG | + | chr5.4:42350597-42350616 | MS.gene78725:intron | 20.0% |
| !!! | ATTGTAAATGTATTTTGAGT+TGG | + | chr5.4:42352147-42352166 | MS.gene78725:intron | 20.0% |
| !!! | CAGTTTTTTCTTTTTCTTTT+TGG | + | chr5.4:42347877-42347896 | MS.gene78725:intron | 20.0% |
| !!! | GAATATTTTCTGTTAGAAAT+GGG | - | chr5.4:42349514-42349533 | None:intergenic | 20.0% |
| !!! | GTTGAATGGAATTTTTTTAT+CGG | + | chr5.4:42347060-42347079 | MS.gene78725:intron | 20.0% |
| !!! | TAAATAGTTTGTCAAAAGAT+TGG | - | chr5.4:42351669-42351688 | None:intergenic | 20.0% |
| !!! | TATTCTTTTCATTACTTTCA+GGG | + | chr5.4:42346514-42346533 | MS.gene78725:intron | 20.0% |
| !!! | TGATGATTCTAAAAACATTA+AGG | - | chr5.4:42346894-42346913 | None:intergenic | 20.0% |
| !!! | TGCCTATTATTTTATCTTTT+AGG | + | chr5.4:42350592-42350611 | MS.gene78725:intron | 20.0% |
| !!! | TTAATGTTTTTAGAATCATC+AGG | + | chr5.4:42346893-42346912 | MS.gene78725:intron | 20.0% |
| !!! | TTATTTTATCTTTTAGGCTA+GGG | + | chr5.4:42350598-42350617 | MS.gene78725:intron | 20.0% |
| !!! | TTGTAAATGTATTTTGAGTT+GGG | + | chr5.4:42352148-42352167 | MS.gene78725:intron | 20.0% |
| !!! | TTTTATAAAGACAAGTAGTT+AGG | + | chr5.4:42349081-42349100 | MS.gene78725:intron | 20.0% |
| !!! | TTTTTTAATTGATAGGAATC+CGG | + | chr5.4:42350237-42350256 | MS.gene78725:intron | 20.0% |
| ! | AAAAACTACTATTAGGATAC+TGG | + | chr5.4:42346621-42346640 | MS.gene78725:intron | 25.0% |
| ! | AAAACTACTATTAGGATACT+GGG | + | chr5.4:42346622-42346641 | MS.gene78725:intron | 25.0% |
| ! | AAATCAAGATAGTAACTGAA+TGG | - | chr5.4:42351285-42351304 | None:intergenic | 25.0% |
| ! | AACTCTATAAGTCAAAGATA+CGG | - | chr5.4:42352122-42352141 | None:intergenic | 25.0% |
| ! | AAGAGAAACATCAATACATA+CGG | - | chr5.4:42349308-42349327 | None:intergenic | 25.0% |
| ! | AAGTTATTTGAGTGGTTAAT+GGG | - | chr5.4:42349791-42349810 | None:intergenic | 25.0% |
| ! | AATCAAAAAAGCAGGTTATA+TGG | + | chr5.4:42349183-42349202 | MS.gene78725:CDS | 25.0% |
| ! | AGACAATATTCACAACAAAT+AGG | - | chr5.4:42345689-42345708 | None:intergenic | 25.0% |
| ! | AGATAAGATATGATCATGAA+TGG | - | chr5.4:42351839-42351858 | None:intergenic | 25.0% |
| ! | ATAAAACAAGCAAGAATTGA+GGG | + | chr5.4:42348101-42348120 | MS.gene78725:intron | 25.0% |
| ! | ATAGGTCTAATCTCAATAAA+GGG | + | chr5.4:42346646-42346665 | MS.gene78725:intron | 25.0% |
| ! | ATATGATCATGAATGGAAAT+AGG | - | chr5.4:42351832-42351851 | None:intergenic | 25.0% |
| ! | ATGACTAATAGAAGATAGAT+TGG | + | chr5.4:42346464-42346483 | MS.gene78725:intron | 25.0% |
| ! | ATGGAAATCTAGATGTATTA+CGG | - | chr5.4:42346814-42346833 | None:intergenic | 25.0% |
| ! | ATTAGTGAAGAGAAAAATCA+CGG | + | chr5.4:42350901-42350920 | MS.gene78725:CDS | 25.0% |
| ! | CACTATAAAACATTCAAAGA+CGG | + | chr5.4:42346547-42346566 | MS.gene78725:intron | 25.0% |
| ! | GTTAAATAGCAACCATATTT+AGG | + | chr5.4:42346715-42346734 | MS.gene78725:intron | 25.0% |
| ! | TAAATAGCAACCATATTTAG+GGG | + | chr5.4:42346717-42346736 | MS.gene78725:intron | 25.0% |
| ! | TAATGAAGAATGATCATATG+AGG | + | chr5.4:42350647-42350666 | MS.gene78725:intron | 25.0% |
| ! | TATAAGAAATTGCACTAATC+TGG | - | chr5.4:42351780-42351799 | None:intergenic | 25.0% |
| ! | TATAGGTCTAATCTCAATAA+AGG | + | chr5.4:42346645-42346664 | MS.gene78725:intron | 25.0% |
| ! | TATCCATAACTAATTCTGTT+TGG | - | chr5.4:42349604-42349623 | None:intergenic | 25.0% |
| ! | TCAAATTACATTGTACTGAA+TGG | + | chr5.4:42348949-42348968 | MS.gene78725:intron | 25.0% |
| ! | TTAAATGTTTCGATCAAAAC+TGG | - | chr5.4:42346981-42347000 | None:intergenic | 25.0% |
| ! | TTCTTACGAACAATAACAAT+TGG | + | chr5.4:42349347-42349366 | MS.gene78725:intron | 25.0% |
| ! | TTTGACAAATCAACATCTTA+AGG | + | chr5.4:42346371-42346390 | MS.gene78725:intron | 25.0% |
| !! | ACAAAGAAACCCATTTTAAA+TGG | - | chr5.4:42348581-42348600 | None:intergenic | 25.0% |
| !! | ACCAAGATAAAAGCATAAAA+TGG | - | chr5.4:42350544-42350563 | None:intergenic | 25.0% |
| !! | ACTATATTAGGTTTTCTAAC+TGG | + | chr5.4:42350312-42350331 | MS.gene78725:intron | 25.0% |
| !! | AGTATACTCAGAAAAGTTTT+TGG | + | chr5.4:42349262-42349281 | MS.gene78725:CDS | 25.0% |
| !! | ATTTCTGTTTAAGTTCTCTT+TGG | + | chr5.4:42351709-42351728 | MS.gene78725:intron | 25.0% |
| !! | CCAAGATAAAAGCATAAAAT+GGG | - | chr5.4:42350543-42350562 | None:intergenic | 25.0% |
| !! | CTATATTAGGTTTTCTAACT+GGG | + | chr5.4:42350313-42350332 | MS.gene78725:intron | 25.0% |
| !! | GTCTAACTTAGTAATTTTCT+GGG | + | chr5.4:42348185-42348204 | MS.gene78725:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr5.4:42347394-42347413 | None:intergenic | 25.0% |
| !! | TAGCATCACTGAAATTTTTA+AGG | + | chr5.4:42346271-42346290 | MS.gene78725:intron | 25.0% |
| !! | TTGTGAATTAACTGTTTTAC+AGG | + | chr5.4:42350676-42350695 | MS.gene78725:intron | 25.0% |
| !! | TTTTGATAGAACAAACACTA+TGG | + | chr5.4:42347459-42347478 | MS.gene78725:intron | 25.0% |
| !!! | ACGATTTTGAAATAGGAATT+GGG | - | chr5.4:42351315-42351334 | None:intergenic | 25.0% |
| !!! | CACTGAAATTTTTAAGGTTA+AGG | + | chr5.4:42346277-42346296 | MS.gene78725:intron | 25.0% |
| !!! | TGAAATTTTTAAGGTTAAGG+AGG | + | chr5.4:42346280-42346299 | MS.gene78725:intron | 25.0% |
| !!! | TGGCTTTTGAAAAAATCTAT+TGG | - | chr5.4:42351978-42351997 | None:intergenic | 25.0% |
| !!! | TTTAATTCTAGTTCAAATGG+AGG | + | chr5.4:42346996-42347015 | MS.gene78725:intron | 25.0% |
| !!! | TTTTTAATTGATAGGAATCC+GGG | + | chr5.4:42350238-42350257 | MS.gene78725:intron | 25.0% |
| AAAATTCCATTCAACTTGAG+TGG | - | chr5.4:42347055-42347074 | None:intergenic | 30.0% | |
| AAACTGAAAATGAGAAGGAT+TGG | - | chr5.4:42346123-42346142 | None:intergenic | 30.0% | |
| AAATAAGTGTAGCAAAGATG+AGG | + | chr5.4:42347149-42347168 | MS.gene78725:intron | 30.0% | |
| AAGAAGGATCTAGAGATTAA+TGG | + | chr5.4:42347418-42347437 | MS.gene78725:intron | 30.0% | |
| AATATTCACAACAAATAGGC+TGG | - | chr5.4:42345685-42345704 | None:intergenic | 30.0% | |
| AATTAAATTCGTCGTTGGAA+AGG | + | chr5.4:42348481-42348500 | MS.gene78725:CDS | 30.0% | |
| ACACCTATAGTAGAAAAGAT+GGG | + | chr5.4:42347253-42347272 | MS.gene78725:intron | 30.0% | |
| ACATGTTGCTAAATTCAACT+CGG | + | chr5.4:42345843-42345862 | MS.gene78725:intron | 30.0% | |
| ACCCAAAATCAAGTTTCTTA+TGG | + | chr5.4:42348740-42348759 | MS.gene78725:intron | 30.0% | |
| ACTAATAGAAGATAGATTGG+AGG | + | chr5.4:42346467-42346486 | MS.gene78725:intron | 30.0% | |
| AGAAGGATCTAGAGATTAAT+GGG | + | chr5.4:42347419-42347438 | MS.gene78725:intron | 30.0% | |
| AGAGAAACATCAATACATAC+GGG | - | chr5.4:42349307-42349326 | None:intergenic | 30.0% | |
| AGTGATTGCTGAACTATATT+AGG | + | chr5.4:42350300-42350319 | MS.gene78725:intron | 30.0% | |
| ATGTGAAATTCTTTGCTCTT+GGG | + | chr5.4:42351745-42351764 | MS.gene78725:intron | 30.0% | |
| ATTCCTATTTCAAAATCGTG+AGG | + | chr5.4:42351316-42351335 | MS.gene78725:intron | 30.0% | |
| ATTGATCAATCTCTGGATAA+AGG | + | chr5.4:42349637-42349656 | MS.gene78725:intron | 30.0% | |
| ATTGTTCGTAAGAAACGAAA+AGG | - | chr5.4:42349341-42349360 | None:intergenic | 30.0% | |
| CATTTCACGACAAGATTTAA+TGG | + | chr5.4:42349000-42349019 | MS.gene78725:CDS | 30.0% | |
| CCAGTACATTGAACTAAATA+AGG | - | chr5.4:42347993-42348012 | None:intergenic | 30.0% | |
| CCCAAAATCAAGTTTCTTAT+GGG | + | chr5.4:42348741-42348760 | MS.gene78725:intron | 30.0% | |
| CTATGGTAGCTAAATAATTG+TGG | + | chr5.4:42351414-42351433 | MS.gene78725:intron | 30.0% | |
| CTTGAATAGACTGAAAATCT+GGG | - | chr5.4:42348692-42348711 | None:intergenic | 30.0% | |
| GAAGTTATTTGAGTGGTTAA+TGG | - | chr5.4:42349792-42349811 | None:intergenic | 30.0% | |
| GAATGTTATTGATCAATCTC+TGG | + | chr5.4:42349630-42349649 | MS.gene78725:intron | 30.0% | |
| GAATTGTAGGCTTGAAATTA+TGG | + | chr5.4:42348372-42348391 | MS.gene78725:intron | 30.0% | |
| GAGTGAACAATTAAACATAG+TGG | - | chr5.4:42350412-42350431 | None:intergenic | 30.0% | |
| GATAAAACAAGCAAGAATTG+AGG | + | chr5.4:42348100-42348119 | MS.gene78725:intron | 30.0% | |
| GGTAAGTTTATTCGAGAAAT+AGG | - | chr5.4:42350013-42350032 | None:intergenic | 30.0% | |
| GTACCAAACAGAATTAGTTA+TGG | + | chr5.4:42349598-42349617 | MS.gene78725:intron | 30.0% | |
| GTGTTTACTACTTTACTCTA+AGG | - | chr5.4:42345879-42345898 | None:intergenic | 30.0% | |
| TACATATATGACTCTCTCTA+AGG | - | chr5.4:42351097-42351116 | None:intergenic | 30.0% | |
| TACCATAGCAATGTAAACTT+TGG | - | chr5.4:42351402-42351421 | None:intergenic | 30.0% | |
| TAGGTCTAATCTCAATAAAG+GGG | + | chr5.4:42346647-42346666 | MS.gene78725:intron | 30.0% | |
| TCATGATCATATCTTATCTC+CGG | + | chr5.4:42351840-42351859 | MS.gene78725:intron | 30.0% | |
| TCTAAAAACATTAAGGACAG+TGG | - | chr5.4:42346887-42346906 | None:intergenic | 30.0% | |
| TGTAACATTCTGATAGAAAC+TGG | + | chr5.4:42349576-42349595 | MS.gene78725:intron | 30.0% | |
| TGTCGCATAAACATAATTCT+GGG | - | chr5.4:42350281-42350300 | None:intergenic | 30.0% | |
| TGTGAAGATTATAAGAGCAA+TGG | - | chr5.4:42348928-42348947 | None:intergenic | 30.0% | |
| TTGAATTCAATGAGGGTTTA+CGG | + | chr5.4:42349432-42349451 | MS.gene78725:intron | 30.0% | |
| TTGCTTACCAGTTTGTATAA+CGG | - | chr5.4:42345652-42345671 | None:intergenic | 30.0% | |
| TTTATCTTGGTCTGTAAACT+GGG | + | chr5.4:42350553-42350572 | MS.gene78725:intron | 30.0% | |
| ! | AACAGTTGATACACTTTGTA+CGG | - | chr5.4:42346786-42346805 | None:intergenic | 30.0% |
| ! | AATTTAGAGCTCAAACATGT+TGG | + | chr5.4:42348543-42348562 | MS.gene78725:intron | 30.0% |
| ! | ACACTTATTTAAGTTCGTGT+TGG | - | chr5.4:42347139-42347158 | None:intergenic | 30.0% |
| ! | CCCATAAGAAACTTGATTTT+GGG | - | chr5.4:42348744-42348763 | None:intergenic | 30.0% |
| ! | CCCATTTTATGCTTTTATCT+TGG | + | chr5.4:42350540-42350559 | MS.gene78725:intron | 30.0% |
| ! | CCTTATTTAGTTCAATGTAC+TGG | + | chr5.4:42347990-42348009 | MS.gene78725:intron | 30.0% |
| ! | CGTCTAACTTAGTAATTTTC+TGG | + | chr5.4:42348184-42348203 | MS.gene78725:intron | 30.0% |
| ! | TGGAGTATGGATTTTTCTTT+GGG | + | chr5.4:42349038-42349057 | MS.gene78725:CDS | 30.0% |
| ! | TTGGAGTATGGATTTTTCTT+TGG | + | chr5.4:42349037-42349056 | MS.gene78725:CDS | 30.0% |
| ! | TTTAATACCTGTTGTTTAGC+TGG | + | chr5.4:42345755-42345774 | MS.gene78725:intron | 30.0% |
| ! | TTTTATCTTGGTCTGTAAAC+TGG | + | chr5.4:42350552-42350571 | MS.gene78725:intron | 30.0% |
| !! | AAGGTTTGTTTCTAGAAGAA+TGG | + | chr5.4:42347751-42347770 | MS.gene78725:intron | 30.0% |
| !! | AATGAAAGCATTAAAGAGAG+AGG | + | chr5.4:42347217-42347236 | MS.gene78725:intron | 30.0% |
| !! | ATGAAAGCATTAAAGAGAGA+GGG | + | chr5.4:42347218-42347237 | MS.gene78725:intron | 30.0% |
| !! | TGTAATTTGTTCTCTCACAT+TGG | + | chr5.4:42348293-42348312 | MS.gene78725:intron | 30.0% |
| !! | TGTGGTTTTACCATTCAATT+TGG | + | chr5.4:42346314-42346333 | MS.gene78725:intron | 30.0% |
| !!! | AATCCTCACGATTTTGAAAT+AGG | - | chr5.4:42351322-42351341 | None:intergenic | 30.0% |
| !!! | AGTTTTTGGTATGATCTCTT+AGG | + | chr5.4:42349276-42349295 | MS.gene78725:intron | 30.0% |
| !!! | CACGATTTTGAAATAGGAAT+TGG | - | chr5.4:42351316-42351335 | None:intergenic | 30.0% |
| !!! | CGCTGATTTTTTAAAAGAAC+AGG | + | chr5.4:42350999-42351018 | MS.gene78725:CDS | 30.0% |
| !!! | GGAATTTTTTTATCGGAAAG+TGG | + | chr5.4:42347067-42347086 | MS.gene78725:intron | 30.0% |
| AAAACTTCTGTATGTCTCCT+CGG | - | chr5.4:42350870-42350889 | None:intergenic | 35.0% | |
| AAAGAATTTCACATGCAGGA+GGG | - | chr5.4:42351739-42351758 | None:intergenic | 35.0% | |
| AAAGCCACAATAGTGATTAG+TGG | + | chr5.4:42351344-42351363 | MS.gene78725:intron | 35.0% | |
| AACATCTCAGGGAGTTTATT+TGG | + | chr5.4:42349219-42349238 | MS.gene78725:CDS | 35.0% | |
| AACTCATGTTCTGTCTTTGA+TGG | + | chr5.4:42346010-42346029 | MS.gene78725:intron | 35.0% | |
| AACTGGGTTAATGAATGAAG+TGG | + | chr5.4:42350569-42350588 | MS.gene78725:intron | 35.0% | |
| AAGCCACAATAGTGATTAGT+GGG | + | chr5.4:42351345-42351364 | MS.gene78725:intron | 35.0% | |
| ACACTGATGTAAAATACCCA+GGG | + | chr5.4:42346071-42346090 | MS.gene78725:intron | 35.0% | |
| ACTATTAGGATACTGGGTAT+AGG | + | chr5.4:42346628-42346647 | MS.gene78725:intron | 35.0% | |
| AGAAACATCAATACATACGG+GGG | - | chr5.4:42349305-42349324 | None:intergenic | 35.0% | |
| AGACTATGTAGGAAAAGACA+TGG | - | chr5.4:42349831-42349850 | None:intergenic | 35.0% | |
| AGGAAAAGACATGGGAAAAT+TGG | - | chr5.4:42349822-42349841 | None:intergenic | 35.0% | |
| AGGTTTCTGTGTAGAAAATG+AGG | - | chr5.4:42346183-42346202 | None:intergenic | 35.0% | |
| AGTAAGGAGAATAGATCAGA+TGG | + | chr5.4:42347331-42347350 | MS.gene78725:intron | 35.0% | |
| ATCAGAAACTACTGAAAAGC+CGG | + | chr5.4:42347660-42347679 | MS.gene78725:intron | 35.0% | |
| ATGAGATGTAGCACTATTGA+TGG | - | chr5.4:42346833-42346852 | None:intergenic | 35.0% | |
| CACAAATTTATGCCTACCAT+AGG | - | chr5.4:42348244-42348263 | None:intergenic | 35.0% | |
| CACACCTATAGTAGAAAAGA+TGG | + | chr5.4:42347252-42347271 | MS.gene78725:intron | 35.0% | |
| CACGACAAGATTTAATGGAA+TGG | + | chr5.4:42349005-42349024 | MS.gene78725:CDS | 35.0% | |
| CAGGTATCAATCAAAAAAGC+AGG | + | chr5.4:42349175-42349194 | MS.gene78725:intron | 35.0% | |
| CATGATCATATCTTATCTCC+GGG | + | chr5.4:42351841-42351860 | MS.gene78725:intron | 35.0% | |
| CATGTGAAATTCTTTGCTCT+TGG | + | chr5.4:42351744-42351763 | MS.gene78725:intron | 35.0% | |
| CCACTCAAATAACTTCCTAA+TGG | + | chr5.4:42349796-42349815 | MS.gene78725:intron | 35.0% | |
| CCATTAGGAAGTTATTTGAG+TGG | - | chr5.4:42349799-42349818 | None:intergenic | 35.0% | |
| CCTATTCAATGCTAAAGTCT+TGG | + | chr5.4:42348792-42348811 | MS.gene78725:intron | 35.0% | |
| CCTCAAACAAAGAGAGAAAT+CGG | - | chr5.4:42350349-42350368 | None:intergenic | 35.0% | |
| CCTTGAATAGACTGAAAATC+TGG | - | chr5.4:42348693-42348712 | None:intergenic | 35.0% | |
| CTAGATAGTTGAAGATGATG+TGG | + | chr5.4:42348410-42348429 | MS.gene78725:intron | 35.0% | |
| CTCAAACAAAGAGAGAAATC+GGG | - | chr5.4:42350348-42350367 | None:intergenic | 35.0% | |
| CTGATATGCAGGGTAAAAAA+AGG | - | chr5.4:42347645-42347664 | None:intergenic | 35.0% | |
| CTGTCGCATAAACATAATTC+TGG | - | chr5.4:42350282-42350301 | None:intergenic | 35.0% | |
| CTTCAATGCAAGTTTGAATC+TGG | - | chr5.4:42346245-42346264 | None:intergenic | 35.0% | |
| CTTGAGAATTTCTGCATGAA+GGG | + | chr5.4:42348208-42348227 | MS.gene78725:intron | 35.0% | |
| GACAAATCAACATCTTAAGG+TGG | + | chr5.4:42346374-42346393 | MS.gene78725:intron | 35.0% | |
| GACTATGTAGGAAAAGACAT+GGG | - | chr5.4:42349830-42349849 | None:intergenic | 35.0% | |
| GAGAAACATCAATACATACG+GGG | - | chr5.4:42349306-42349325 | None:intergenic | 35.0% | |
| GAGTGAAACTGAAAATGAGA+AGG | - | chr5.4:42346128-42346147 | None:intergenic | 35.0% | |
| GCAAGTTTGAATCTGGTAAT+GGG | - | chr5.4:42346238-42346257 | None:intergenic | 35.0% | |
| GGAATACAAATTCACCTATC+AGG | - | chr5.4:42348907-42348926 | None:intergenic | 35.0% | |
| GGAGTCATTTGTTTCGATAT+TGG | + | chr5.4:42348031-42348050 | MS.gene78725:intron | 35.0% | |
| GGTTTCTGTGTAGAAAATGA+GGG | - | chr5.4:42346182-42346201 | None:intergenic | 35.0% | |
| GTCAGTCTTAAAGAAGTTGA+AGG | + | chr5.4:42347732-42347751 | MS.gene78725:CDS | 35.0% | |
| GTCCAAAGTTTACATTGCTA+TGG | + | chr5.4:42351397-42351416 | MS.gene78725:intron | 35.0% | |
| GTGAAAGAGATAACATCTCA+GGG | + | chr5.4:42349208-42349227 | MS.gene78725:CDS | 35.0% | |
| GTGTTTACTACCTTACTCTA+AGG | - | chr5.4:42345731-42345750 | None:intergenic | 35.0% | |
| GTTTCTGTGTAGAAAATGAG+GGG | - | chr5.4:42346181-42346200 | None:intergenic | 35.0% | |
| TAACTGAATGGATACTTGAC+TGG | - | chr5.4:42351273-42351292 | None:intergenic | 35.0% | |
| TAGACAGACTCTCCAAAAAA+TGG | - | chr5.4:42345953-42345972 | None:intergenic | 35.0% | |
| TATTTGAGTGGTTAATGGGA+GGG | - | chr5.4:42349787-42349806 | None:intergenic | 35.0% | |
| TCAAACTGATGCAACACATT+AGG | - | chr5.4:42346356-42346375 | None:intergenic | 35.0% | |
| TCAAAGATACGGTACTAATC+TGG | - | chr5.4:42352111-42352130 | None:intergenic | 35.0% | |
| TCAGTAGTTTCTGATATGCA+GGG | - | chr5.4:42347655-42347674 | None:intergenic | 35.0% | |
| TCTTGGAAGAGTAGTTCAAA+TGG | + | chr5.4:42348844-42348863 | MS.gene78725:CDS | 35.0% | |
| TCTTTATAAAACCACGTACC+TGG | - | chr5.4:42349072-42349091 | None:intergenic | 35.0% | |
| TGACAGCTATCAAGATTTCA+CGG | + | chr5.4:42346407-42346426 | MS.gene78725:intron | 35.0% | |
| TGCAAGTTTGAATCTGGTAA+TGG | - | chr5.4:42346239-42346258 | None:intergenic | 35.0% | |
| TGTGAAAGAGATAACATCTC+AGG | + | chr5.4:42349207-42349226 | MS.gene78725:CDS | 35.0% | |
| TTACCATTCAATTTGGTCCT+TGG | + | chr5.4:42346321-42346340 | MS.gene78725:intron | 35.0% | |
| TTATTTGAGTGGTTAATGGG+AGG | - | chr5.4:42349788-42349807 | None:intergenic | 35.0% | |
| TTCAGTAGTTTCTGATATGC+AGG | - | chr5.4:42347656-42347675 | None:intergenic | 35.0% | |
| TTGTGACAAAAGATGAATCC+CGG | - | chr5.4:42351862-42351881 | None:intergenic | 35.0% | |
| TTTAAAAGAACAGGCAGCAA+TGG | + | chr5.4:42351008-42351027 | MS.gene78725:CDS | 35.0% | |
| TTTATCGGAAAGTGGTAAGA+CGG | + | chr5.4:42347075-42347094 | MS.gene78725:intron | 35.0% | |
| ! | AAGGAGGATGAACAATTTTG+TGG | + | chr5.4:42346296-42346315 | MS.gene78725:intron | 35.0% |
| ! | ACTCTTCCAAGATAATTTGC+TGG | - | chr5.4:42348836-42348855 | None:intergenic | 35.0% |
| ! | AGGAGACATACAGAAGTTTT+GGG | + | chr5.4:42350870-42350889 | MS.gene78725:CDS | 35.0% |
| ! | CAAGTTTGAATCTGGTAATG+GGG | - | chr5.4:42346237-42346256 | None:intergenic | 35.0% |
| ! | CCAAGACTTTAGCATTGAAT+AGG | - | chr5.4:42348795-42348814 | None:intergenic | 35.0% |
| ! | CCAGATTTTCAGTCTATTCA+AGG | + | chr5.4:42348690-42348709 | MS.gene78725:CDS | 35.0% |
| ! | CGATTTCTCTCTTTGTTTGA+GGG | + | chr5.4:42350347-42350366 | MS.gene78725:intron | 35.0% |
| ! | CTACCCATCTTTTCTACTAT+AGG | - | chr5.4:42347259-42347278 | None:intergenic | 35.0% |
| ! | GAGTTACGATTTTCACTTCA+TGG | - | chr5.4:42350163-42350182 | None:intergenic | 35.0% |
| ! | GCCCATAAGAAACTTGATTT+TGG | - | chr5.4:42348745-42348764 | None:intergenic | 35.0% |
| ! | GCTATTGTTGAAGGTTTGTT+TGG | - | chr5.4:42350721-42350740 | None:intergenic | 35.0% |
| !! | AAAGTACCACTCAAGTTGAA+TGG | + | chr5.4:42347046-42347065 | MS.gene78725:intron | 35.0% |
| !! | AAGTTTGAATCTGGTAATGG+GGG | - | chr5.4:42346236-42346255 | None:intergenic | 35.0% |
| !! | AATCCTGTGTTTTGGATTTC+TGG | - | chr5.4:42348607-42348626 | None:intergenic | 35.0% |
| !! | CTCTTCCAAGATAATTTGCT+GGG | - | chr5.4:42348835-42348854 | None:intergenic | 35.0% |
| !! | GCAGAAAGTATTAGAAAGAG+TGG | + | chr5.4:42349703-42349722 | MS.gene78725:intron | 35.0% |
| !! | GCATAAATTTGTGCTGCTTA+GGG | + | chr5.4:42348251-42348270 | MS.gene78725:intron | 35.0% |
| !! | TCTTCCAAGATAATTTGCTG+GGG | - | chr5.4:42348834-42348853 | None:intergenic | 35.0% |
| !!! | AAGGTTTGGAGTTGGTATTT+TGG | + | chr5.4:42351368-42351387 | MS.gene78725:intron | 35.0% |
| !!! | CGCACAGTTTTGTTTAAATC+TGG | - | chr5.4:42351998-42352017 | None:intergenic | 35.0% |
| !!! | CTGCTTTTTTGATTGATACC+TGG | - | chr5.4:42349177-42349196 | None:intergenic | 35.0% |
| !!! | CTGTCTGGTAAACCATTTTT+TGG | + | chr5.4:42345938-42345957 | MS.gene78725:intron | 35.0% |
| !!! | TTGGAGTTGGTATTTTGGTT+TGG | + | chr5.4:42351373-42351392 | MS.gene78725:intron | 35.0% |
| AAACTGGTAAGCAACCACAA+TGG | + | chr5.4:42345658-42345677 | MS.gene78725:intron | 40.0% | |
| AAATCACTAGTGGTAGGGTA+GGG | + | chr5.4:42347363-42347382 | MS.gene78725:intron | 40.0% | |
| AAGAAGCTCTTCAGATGCTT+AGG | + | chr5.4:42351208-42351227 | MS.gene78725:CDS | 40.0% | |
| AAGCATTAAAGAGAGAGGGT+TGG | + | chr5.4:42347222-42347241 | MS.gene78725:intron | 40.0% | |
| AAGGAGAATAGATCAGATGG+AGG | + | chr5.4:42347334-42347353 | MS.gene78725:intron | 40.0% | |
| AATGGAATGGAGAACTCAGT+TGG | + | chr5.4:42349018-42349037 | MS.gene78725:CDS | 40.0% | |
| AATTCAATGAGGGTTTACGG+AGG | + | chr5.4:42349435-42349454 | MS.gene78725:intron | 40.0% | |
| ACATGGGAAAATTGGCCATT+AGG | - | chr5.4:42349814-42349833 | None:intergenic | 40.0% | |
| ACCTGGACTGTAAAAAAGTC+AGG | - | chr5.4:42349160-42349179 | None:intergenic | 40.0% | |
| ACCTTCAACAATAGCACAAG+CGG | + | chr5.4:42350726-42350745 | MS.gene78725:CDS | 40.0% | |
| ACTACAATTACCACCACTCA+TGG | + | chr5.4:42345564-42345583 | MS.gene78725:CDS | 40.0% | |
| AGACTGACAATGCTTCTTCT+TGG | - | chr5.4:42347720-42347739 | None:intergenic | 40.0% | |
| AGCATTAAAGAGAGAGGGTT+GGG | + | chr5.4:42347223-42347242 | MS.gene78725:intron | 40.0% | |
| AGCGATTCGCAATACTTGAA+GGG | - | chr5.4:42345913-42345932 | None:intergenic | 40.0% | |
| AGGAGAATAGATCAGATGGA+GGG | + | chr5.4:42347335-42347354 | MS.gene78725:intron | 40.0% | |
| AGGGTTATTCCTATGCATCT+AGG | + | chr5.4:42350617-42350636 | MS.gene78725:intron | 40.0% | |
| ATAGCAACCATATTTAGGGG+AGG | + | chr5.4:42346720-42346739 | MS.gene78725:intron | 40.0% | |
| ATGCCAAGGACCAAATTGAA+TGG | - | chr5.4:42346327-42346346 | None:intergenic | 40.0% | |
| ATTATCTACAGAGCCAGACA+AGG | - | chr5.4:42348643-42348662 | None:intergenic | 40.0% | |
| ATTCAAAGATCGCAGGATTG+TGG | - | chr5.4:42350092-42350111 | None:intergenic | 40.0% | |
| CAAAGAATTTCACATGCAGG+AGG | - | chr5.4:42351740-42351759 | None:intergenic | 40.0% | |
| CAAAGATGAGGATGTTGTGT+TGG | + | chr5.4:42347161-42347180 | MS.gene78725:intron | 40.0% | |
| CAAGCAAGAATTGAGGGAAA+AGG | + | chr5.4:42348107-42348126 | MS.gene78725:intron | 40.0% | |
| CACAATAGTGATTAGTGGGA+AGG | + | chr5.4:42351349-42351368 | MS.gene78725:intron | 40.0% | |
| CACACTGATGTAAAATACCC+AGG | + | chr5.4:42346070-42346089 | MS.gene78725:intron | 40.0% | |
| CACGTTAGTGACTCAAACAA+AGG | + | chr5.4:42346097-42346116 | MS.gene78725:intron | 40.0% | |
| CAGACAAGTAGTATTCACCT+AGG | + | chr5.4:42347791-42347810 | MS.gene78725:intron | 40.0% | |
| CCAATTCTTGAAGAACCCAT+TGG | - | chr5.4:42349750-42349769 | None:intergenic | 40.0% | |
| CTCCTTACTATAGAATCCAC+AGG | - | chr5.4:42347320-42347339 | None:intergenic | 40.0% | |
| CTTAGTTGCTTAACTCTGAG+AGG | + | chr5.4:42346036-42346055 | MS.gene78725:intron | 40.0% | |
| CTTCCAGAAATCCAAAACAC+AGG | + | chr5.4:42348601-42348620 | MS.gene78725:intron | 40.0% | |
| CTTCCCACTAATCACTATTG+TGG | - | chr5.4:42351351-42351370 | None:intergenic | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | + | chr5.4:42347278-42347297 | MS.gene78725:intron | 40.0% | |
| GAAGAAGCCGTTATACAAAC+TGG | + | chr5.4:42345642-42345661 | MS.gene78725:CDS | 40.0% | |
| GAATAAACTTACCACACCCT+GGG | + | chr5.4:42350020-42350039 | MS.gene78725:intron | 40.0% | |
| GACCTGTGGATTCTATAGTA+AGG | + | chr5.4:42347315-42347334 | MS.gene78725:intron | 40.0% | |
| GACTGACAATGCTTCTTCTT+GGG | - | chr5.4:42347719-42347738 | None:intergenic | 40.0% | |
| GAGCAAAGAATTTCACATGC+AGG | - | chr5.4:42351743-42351762 | None:intergenic | 40.0% | |
| GAGTCAAATCACTAGTGGTA+GGG | + | chr5.4:42347358-42347377 | MS.gene78725:intron | 40.0% | |
| GATGGGTAGAAACTAGACTT+AGG | + | chr5.4:42347270-42347289 | MS.gene78725:intron | 40.0% | |
| GCACTCTTTAGTGGAATTGT+AGG | + | chr5.4:42348359-42348378 | MS.gene78725:intron | 40.0% | |
| GCTTGAGAATTTCTGCATGA+AGG | + | chr5.4:42348207-42348226 | MS.gene78725:intron | 40.0% | |
| GGGAGTTTATTTGGACATGT+TGG | + | chr5.4:42349228-42349247 | MS.gene78725:CDS | 40.0% | |
| GTTTATTTGGACATGTTGGC+AGG | + | chr5.4:42349232-42349251 | MS.gene78725:CDS | 40.0% | |
| TAGCAACCATATTTAGGGGA+GGG | + | chr5.4:42346721-42346740 | MS.gene78725:intron | 40.0% | |
| TAGTAGGCCTACTTAGGTTA+GGG | + | chr5.4:42345778-42345797 | MS.gene78725:intron | 40.0% | |
| TAGTGATTAGTGGGAAGGTT+TGG | + | chr5.4:42351354-42351373 | MS.gene78725:intron | 40.0% | |
| TATTGCACTCCTAGATGCAT+AGG | - | chr5.4:42350629-42350648 | None:intergenic | 40.0% | |
| TCTTCAAGAATTGGAGAGCT+TGG | + | chr5.4:42349756-42349775 | MS.gene78725:intron | 40.0% | |
| TGACGTAGATGAATGATGCA+CGG | - | chr5.4:42348514-42348533 | None:intergenic | 40.0% | |
| TGCGTGGCTTCCATTTAAAA+TGG | + | chr5.4:42348568-42348587 | MS.gene78725:intron | 40.0% | |
| TGCTTATGCAGCAGTTAGTT+GGG | + | chr5.4:42346693-42346712 | MS.gene78725:intron | 40.0% | |
| TGTGTTTGTGCACTCTTTAG+TGG | + | chr5.4:42348350-42348369 | MS.gene78725:intron | 40.0% | |
| TTATCGGAAAGTGGTAAGAC+GGG | + | chr5.4:42347076-42347095 | MS.gene78725:intron | 40.0% | |
| TTGCTTATGCAGCAGTTAGT+TGG | + | chr5.4:42346692-42346711 | MS.gene78725:intron | 40.0% | |
| TTGTATAACGGCTTCTTCAG+CGG | - | chr5.4:42345640-42345659 | None:intergenic | 40.0% | |
| TTTCCTGCTACCTTAGAGTA+AGG | + | chr5.4:42345718-42345737 | MS.gene78725:intron | 40.0% | |
| ! | ACAAGCTCACAGTTTTCCAA+TGG | + | chr5.4:42349731-42349750 | MS.gene78725:intron | 40.0% |
| ! | CAAGCTCACAGTTTTCCAAT+GGG | + | chr5.4:42349732-42349751 | MS.gene78725:intron | 40.0% |
| ! | CCAATGGGTTCTTCAAGAAT+TGG | + | chr5.4:42349747-42349766 | MS.gene78725:intron | 40.0% |
| ! | CCGATTTCTCTCTTTGTTTG+AGG | + | chr5.4:42350346-42350365 | MS.gene78725:intron | 40.0% |
| ! | GAAAAATCACGGTTCTGATG+TGG | + | chr5.4:42350912-42350931 | MS.gene78725:CDS | 40.0% |
| ! | GAGGAGACATACAGAAGTTT+TGG | + | chr5.4:42350869-42350888 | MS.gene78725:CDS | 40.0% |
| ! | GCAACATGTTGATTACACAC+CGG | - | chr5.4:42345832-42345851 | None:intergenic | 40.0% |
| ! | GCGTGGCTTCCATTTAAAAT+GGG | + | chr5.4:42348569-42348588 | MS.gene78725:intron | 40.0% |
| ! | GGATCTAGAGATTAATGGGT+TGG | + | chr5.4:42347423-42347442 | MS.gene78725:intron | 40.0% |
| ! | GTTTTCCTGAAAACTCAACC+CGG | - | chr5.4:42350259-42350278 | None:intergenic | 40.0% |
| !! | GGCATAAATTTGTGCTGCTT+AGG | + | chr5.4:42348250-42348269 | MS.gene78725:intron | 40.0% |
| !! | TAATGGGTTGGAGAAAGACA+TGG | + | chr5.4:42347435-42347454 | MS.gene78725:intron | 40.0% |
| !! | TTTCTTTGGGATAATCGACC+AGG | + | chr5.4:42349051-42349070 | MS.gene78725:CDS | 40.0% |
| !!! | ACCTGACTTTTTTACAGTCC+AGG | + | chr5.4:42349156-42349175 | MS.gene78725:intron | 40.0% |
| !!! | ATTTTGAGTTGGGCAGAACT+TGG | + | chr5.4:42352158-42352177 | MS.gene78725:intron | 40.0% |
| !!! | TTTTGAGTTGGGCAGAACTT+GGG | + | chr5.4:42352159-42352178 | MS.gene78725:intron | 40.0% |
| AAGGGGCTGAGTAAGGAAAT+TGG | + | chr5.4:42346664-42346683 | MS.gene78725:intron | 45.0% | |
| AATCACTAGTGGTAGGGTAG+GGG | + | chr5.4:42347364-42347383 | MS.gene78725:intron | 45.0% | |
| ACAGGGATTGTAATTCGTGC+CGG | - | chr5.4:42347682-42347701 | None:intergenic | 45.0% | |
| ACATGTAGAGAGAAGACCTG+TGG | + | chr5.4:42347301-42347320 | MS.gene78725:intron | 45.0% | |
| ACATTAGGTCTCACATGCCA+AGG | - | chr5.4:42346341-42346360 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | + | chr5.4:42347169-42347188 | MS.gene78725:intron | 45.0% | |
| AGGCGTGTGTGATATGCTAT+CGG | - | chr5.4:42349993-42350012 | None:intergenic | 45.0% | |
| AGGGGCTGAGTAAGGAAATT+GGG | + | chr5.4:42346665-42346684 | MS.gene78725:intron | 45.0% | |
| AGTAGGCCTACTTAGGTTAG+GGG | + | chr5.4:42345779-42345798 | MS.gene78725:intron | 45.0% | |
| ATGAGGGTTTACGGAGGAAA+TGG | + | chr5.4:42349441-42349460 | MS.gene78725:intron | 45.0% | |
| CAAATCACTAGTGGTAGGGT+AGG | + | chr5.4:42347362-42347381 | MS.gene78725:intron | 45.0% | |
| CATATTTAGGGGAGGGAACA+TGG | + | chr5.4:42346728-42346747 | MS.gene78725:intron | 45.0% | |
| CATGTTCCCTCCCCTAAATA+TGG | - | chr5.4:42346730-42346749 | None:intergenic | 45.0% | |
| CCATCTAGCAAACTGTCTTC+TGG | - | chr5.4:42348454-42348473 | None:intergenic | 45.0% | |
| CCTACTACCAGCTAAACAAC+AGG | - | chr5.4:42345765-42345784 | None:intergenic | 45.0% | |
| CCTCAGTTATTACGAACCTC+CGG | + | chr5.4:42345810-42345829 | MS.gene78725:intron | 45.0% | |
| CCTTGAGGCAGCAAACAATT+TGG | + | chr5.4:42350945-42350964 | MS.gene78725:CDS | 45.0% | |
| CGAATAAACTTACCACACCC+TGG | + | chr5.4:42350019-42350038 | MS.gene78725:intron | 45.0% | |
| CGCAGGATTGTGGTAACATT+GGG | - | chr5.4:42350082-42350101 | None:intergenic | 45.0% | |
| CGCATCACATAAAACACCTG+AGG | - | chr5.4:42347026-42347045 | None:intergenic | 45.0% | |
| CGGAGGTTCGTAATAACTGA+GGG | - | chr5.4:42345812-42345831 | None:intergenic | 45.0% | |
| CGTGGGTCAATTGATGCTAT+TGG | + | chr5.4:42351630-42351649 | MS.gene78725:intron | 45.0% | |
| CTCAATAAAGGGGCTGAGTA+AGG | + | chr5.4:42346657-42346676 | MS.gene78725:intron | 45.0% | |
| GACGTAGATGAATGATGCAC+GGG | - | chr5.4:42348513-42348532 | None:intergenic | 45.0% | |
| GAGCGATTCGCAATACTTGA+AGG | - | chr5.4:42345914-42345933 | None:intergenic | 45.0% | |
| GAGGGAAATTCAAAGATCGC+AGG | - | chr5.4:42350099-42350118 | None:intergenic | 45.0% | |
| GAGTTGTACAGAGTACACCT+AGG | - | chr5.4:42347811-42347830 | None:intergenic | 45.0% | |
| GCATTAAAGAGAGAGGGTTG+GGG | + | chr5.4:42347224-42347243 | MS.gene78725:intron | 45.0% | |
| GGAGAATAGATCAGATGGAG+GGG | + | chr5.4:42347336-42347355 | MS.gene78725:intron | 45.0% | |
| GGAGTCAAATCACTAGTGGT+AGG | + | chr5.4:42347357-42347376 | MS.gene78725:intron | 45.0% | |
| GGGTAGAAACTAGACTTAGG+TGG | + | chr5.4:42347273-42347292 | MS.gene78725:intron | 45.0% | |
| GTAGTAGGCCTACTTAGGTT+AGG | + | chr5.4:42345777-42345796 | MS.gene78725:intron | 45.0% | |
| TAGAAGCTGAGAATTCTGCC+AGG | + | chr5.4:42350806-42350825 | MS.gene78725:CDS | 45.0% | |
| TCAAAACCGACGCAAGTTTC+CGG | - | chr5.4:42350203-42350222 | None:intergenic | 45.0% | |
| TCGCAGGATTGTGGTAACAT+TGG | - | chr5.4:42350083-42350102 | None:intergenic | 45.0% | |
| TCTGTGTAGAAAATGAGGGG+TGG | - | chr5.4:42346178-42346197 | None:intergenic | 45.0% | |
| TCTTTGAATTTCCCTCCGTG+CGG | + | chr5.4:42350103-42350122 | MS.gene78725:intron | 45.0% | |
| TGACAATGCTTCTTCTTGGG+TGG | - | chr5.4:42347716-42347735 | None:intergenic | 45.0% | |
| TGGAGAACTCAGTTGGAGTA+TGG | + | chr5.4:42349025-42349044 | MS.gene78725:CDS | 45.0% | |
| TGGTCCCCAGCAAATTATCT+TGG | + | chr5.4:42348827-42348846 | MS.gene78725:CDS | 45.0% | |
| TTCCACACTTATAGACCTCC+AGG | - | chr5.4:42345987-42346006 | None:intergenic | 45.0% | |
| TTCTTTCTCAGCTTCTAGCG+TGG | - | chr5.4:42351193-42351212 | None:intergenic | 45.0% | |
| TTTGTCTCGATCACCATGAG+TGG | - | chr5.4:42345580-42345599 | None:intergenic | 45.0% | |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr5.4:42347511-42347530 | None:intergenic | 45.0% |
| ! | ACAAATAGGCTGGTCCATTG+TGG | - | chr5.4:42345675-42345694 | None:intergenic | 45.0% |
| ! | ACATGTTGATTACACACCGG+AGG | - | chr5.4:42345829-42345848 | None:intergenic | 45.0% |
| ! | AGTGGAGCAATCCTGTGTTT+TGG | - | chr5.4:42348615-42348634 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr5.4:42347512-42347531 | None:intergenic | 45.0% |
| ! | CCAAATTGTTTGCTGCCTCA+AGG | - | chr5.4:42350948-42350967 | None:intergenic | 45.0% |
| ! | CCTGTTGTTTAGCTGGTAGT+AGG | + | chr5.4:42345762-42345781 | MS.gene78725:intron | 45.0% |
| ! | TACGGTACTAATCTGGAGCA+CGG | - | chr5.4:42352104-42352123 | None:intergenic | 45.0% |
| ! | TGGCATTTGCTGAACATTGC+TGG | + | chr5.4:42348010-42348029 | MS.gene78725:intron | 45.0% |
| ! | TTAGTGGGAAGGTTTGGAGT+TGG | + | chr5.4:42351360-42351379 | MS.gene78725:intron | 45.0% |
| !! | CCAGAAGACAGTTTGCTAGA+TGG | + | chr5.4:42348451-42348470 | MS.gene78725:CDS | 45.0% |
| !! | CTACCTTACTCTAAGGTAGC+AGG | - | chr5.4:42345724-42345743 | None:intergenic | 45.0% |
| !! | CTCAAACATGTTGGTTTGCG+TGG | + | chr5.4:42348552-42348571 | MS.gene78725:intron | 45.0% |
| !! | GTGTGTAGTGGTTCTAGGAT+AGG | - | chr5.4:42346203-42346222 | None:intergenic | 45.0% |
| AAAATGAGGGGTGGCATGGA+TGG | - | chr5.4:42346169-42346188 | None:intergenic | 50.0% | |
| AAATGAGGGGTGGCATGGAT+GGG | - | chr5.4:42346168-42346187 | None:intergenic | 50.0% | |
| AACAATAGCACAAGCGGCTG+TGG | + | chr5.4:42350732-42350751 | MS.gene78725:CDS | 50.0% | |
| AGCATCAACCAATGGACCCA+GGG | - | chr5.4:42350039-42350058 | None:intergenic | 50.0% | |
| AGCTGGTAGTAGGCCTACTT+AGG | + | chr5.4:42345772-42345791 | MS.gene78725:intron | 50.0% | |
| AGGTAGGGCGAAGATGGAAA+TGG | + | chr5.4:42352230-42352249 | MS.gene78725:CDS | 50.0% | |
| AGTCACTAACGTGAGTCCCT+GGG | - | chr5.4:42346090-42346109 | None:intergenic | 50.0% | |
| CAATGCCCCCTAACCTAAGT+AGG | - | chr5.4:42345788-42345807 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr5.4:42347510-42347529 | MS.gene78725:intron | 50.0% | |
| CCGGAGGTTCGTAATAACTG+AGG | - | chr5.4:42345813-42345832 | None:intergenic | 50.0% | |
| CGTGTGTGATATGCTATCGG+AGG | - | chr5.4:42349990-42350009 | None:intergenic | 50.0% | |
| CTCAGCTTCTAGCGTGGATT+TGG | - | chr5.4:42351187-42351206 | None:intergenic | 50.0% | |
| CTGCTGTTCTTGCTGAGGTA+GGG | + | chr5.4:42352215-42352234 | MS.gene78725:CDS | 50.0% | |
| GAAGGGCTACACGTATCCTA+TGG | + | chr5.4:42348225-42348244 | MS.gene78725:intron | 50.0% | |
| GAGCCAGACAAGGATACAAG+TGG | - | chr5.4:42348633-42348652 | None:intergenic | 50.0% | |
| GAGGGGAGTCAAATCACTAG+TGG | + | chr5.4:42347353-42347372 | MS.gene78725:intron | 50.0% | |
| GCATTTCCGGAAACTTGCGT+CGG | + | chr5.4:42350194-42350213 | MS.gene78725:intron | 50.0% | |
| GCTAAAGTCTTGGCAGAAGC+CGG | + | chr5.4:42348802-42348821 | MS.gene78725:intron | 50.0% | |
| GCTCCACTTGTATCCTTGTC+TGG | + | chr5.4:42348627-42348646 | MS.gene78725:CDS | 50.0% | |
| GCTGATCCAGCATCAACCAA+TGG | - | chr5.4:42350047-42350066 | None:intergenic | 50.0% | |
| GCTGGATCAGCTCCTCATTT+GGG | + | chr5.4:42350056-42350075 | MS.gene78725:intron | 50.0% | |
| GGCTACACGTATCCTATGGT+AGG | + | chr5.4:42348229-42348248 | MS.gene78725:intron | 50.0% | |
| GGGTGGAATCAGCTGAAACA+GGG | - | chr5.4:42347699-42347718 | None:intergenic | 50.0% | |
| GGTAACATTGGGCCCAAATG+AGG | - | chr5.4:42350071-42350090 | None:intergenic | 50.0% | |
| GGTAGGGCGAAGATGGAAAT+GGG | + | chr5.4:42352231-42352250 | MS.gene78725:CDS | 50.0% | |
| GTAGAAAATGAGGGGTGGCA+TGG | - | chr5.4:42346173-42346192 | None:intergenic | 50.0% | |
| GTAGGCCTACTTAGGTTAGG+GGG | + | chr5.4:42345780-42345799 | MS.gene78725:intron | 50.0% | |
| GTGTGATATGCTATCGGAGG+TGG | - | chr5.4:42349987-42350006 | None:intergenic | 50.0% | |
| TATAACGGCTTCTTCAGCGG+TGG | - | chr5.4:42345637-42345656 | None:intergenic | 50.0% | |
| TCAGCTCGCATCTGCATTTC+CGG | + | chr5.4:42350181-42350200 | MS.gene78725:intron | 50.0% | |
| TGATCGAGACAAAGCTGTGG+TGG | + | chr5.4:42345587-42345606 | MS.gene78725:CDS | 50.0% | |
| TGCCTGGAGGTCTATAAGTG+TGG | + | chr5.4:42345982-42346001 | MS.gene78725:intron | 50.0% | |
| TGCTCGTGTGTAGTGGTTCT+AGG | - | chr5.4:42346208-42346227 | None:intergenic | 50.0% | |
| TGCTGGATCAGCTCCTCATT+TGG | + | chr5.4:42350055-42350074 | MS.gene78725:intron | 50.0% | |
| TGCTGTACGGGACAAAGTGT+TGG | + | chr5.4:42347102-42347121 | MS.gene78725:intron | 50.0% | |
| TGGGTGGAATCAGCTGAAAC+AGG | - | chr5.4:42347700-42347719 | None:intergenic | 50.0% | |
| TGGTGATCGAGACAAAGCTG+TGG | + | chr5.4:42345584-42345603 | MS.gene78725:CDS | 50.0% | |
| TGTGGAGAGGCTTTACCTTG+AGG | + | chr5.4:42350930-42350949 | MS.gene78725:CDS | 50.0% | |
| TTAGGGGAGGGAACATGGAA+GGG | + | chr5.4:42346733-42346752 | MS.gene78725:intron | 50.0% | |
| TTGGACATGTTGGCAGGAGA+TGG | + | chr5.4:42349238-42349257 | MS.gene78725:CDS | 50.0% | |
| TTTAGGGGAGGGAACATGGA+AGG | + | chr5.4:42346732-42346751 | MS.gene78725:intron | 50.0% | |
| ! | ATCACGGTTCTGATGTGGAG+AGG | + | chr5.4:42350917-42350936 | MS.gene78725:CDS | 50.0% |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr5.4:42347513-42347532 | None:intergenic | 50.0% |
| ! | CTTTTCCCACTAAGTGGGGT+CGG | - | chr5.4:42347507-42347526 | None:intergenic | 50.0% |
| ! | GCCGCTTGTGCTATTGTTGA+AGG | - | chr5.4:42350730-42350749 | None:intergenic | 50.0% |
| ! | GCTGTACGGGACAAAGTGTT+GGG | + | chr5.4:42347103-42347122 | MS.gene78725:intron | 50.0% |
| ! | GTTTTCTAACTGGGCCAAGC+AGG | + | chr5.4:42350322-42350341 | MS.gene78725:intron | 50.0% |
| !! | ATGGTGTCACTGAGCTACGT+GGG | + | chr5.4:42351613-42351632 | MS.gene78725:intron | 50.0% |
| !! | GGAATCCGGGTTGAGTTTTC+AGG | + | chr5.4:42350251-42350270 | MS.gene78725:intron | 50.0% |
| !! | TAATTTGCTGGGGACCACAC+CGG | - | chr5.4:42348824-42348843 | None:intergenic | 50.0% |
| !! | TTCAAATGGAGGAGTGCCTC+AGG | + | chr5.4:42347007-42347026 | MS.gene78725:intron | 50.0% |
| !! | TTGAATCTGGTAATGGGGGC+TGG | - | chr5.4:42346232-42346251 | None:intergenic | 50.0% |
| AATGAGGGGTGGCATGGATG+GGG | - | chr5.4:42346167-42346186 | None:intergenic | 55.0% | |
| AGAGAGAAATCGGGCCTGCT+TGG | - | chr5.4:42350339-42350358 | None:intergenic | 55.0% | |
| AGATCTGAGCTGCTTAGCCG+AGG | + | chr5.4:42350850-42350869 | MS.gene78725:CDS | 55.0% | |
| ATCCCATGTGCATCACCGCA+CGG | - | chr5.4:42350121-42350140 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.4:42347498-42347517 | MS.gene78725:intron | 55.0% | |
| CACATGGGATCGACAGTTGC+AGG | + | chr5.4:42350131-42350150 | MS.gene78725:intron | 55.0% | |
| CAGAACTTGGGTGGAGGATG+AGG | + | chr5.4:42352171-42352190 | MS.gene78725:intron | 55.0% | |
| CAGCATCAACCAATGGACCC+AGG | - | chr5.4:42350040-42350059 | None:intergenic | 55.0% | |
| CCTCAGCAAGAACAGCAGCA+CGG | - | chr5.4:42352213-42352232 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGAAA+AGG | + | chr5.4:42347505-42347524 | MS.gene78725:intron | 55.0% | |
| CTCAGCAAGAACAGCAGCAC+GGG | - | chr5.4:42352212-42352231 | None:intergenic | 55.0% | |
| CTCTTCTGTCTCAGCTTGCC+TGG | - | chr5.4:42350827-42350846 | None:intergenic | 55.0% | |
| CTGTCTATGCACTCTCTGCC+TGG | + | chr5.4:42345966-42345985 | MS.gene78725:intron | 55.0% | |
| GAGGGAACATGGAAGGGGAA+TGG | + | chr5.4:42346739-42346758 | MS.gene78725:intron | 55.0% | |
| GAGTCACTAACGTGAGTCCC+TGG | - | chr5.4:42346091-42346110 | None:intergenic | 55.0% | |
| GAGTGGTTAATGGGAGGGAG+AGG | - | chr5.4:42349782-42349801 | None:intergenic | 55.0% | |
| GCTGCTGTTCTTGCTGAGGT+AGG | + | chr5.4:42352214-42352233 | MS.gene78725:CDS | 55.0% | |
| GGGATAATCGACCAGGTACG+TGG | + | chr5.4:42349058-42349077 | MS.gene78725:intron | 55.0% | |
| GTAAGACGGGCGATGCTGTA+CGG | + | chr5.4:42347089-42347108 | MS.gene78725:intron | 55.0% | |
| GTCTCGATCACCATGAGTGG+TGG | - | chr5.4:42345577-42345596 | None:intergenic | 55.0% | |
| TAAGACGGGCGATGCTGTAC+GGG | + | chr5.4:42347090-42347109 | MS.gene78725:intron | 55.0% | |
| TAGGGGAGGGAACATGGAAG+GGG | + | chr5.4:42346734-42346753 | MS.gene78725:intron | 55.0% | |
| TCGAGACAAAGCTGTGGTGG+TGG | + | chr5.4:42345590-42345609 | MS.gene78725:CDS | 55.0% | |
| TCTATGCACTCTCTGCCTGG+AGG | + | chr5.4:42345969-42345988 | MS.gene78725:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.4:42347499-42347518 | MS.gene78725:intron | 55.0% | |
| TTACCACACCCTGGGTCCAT+TGG | + | chr5.4:42350028-42350047 | MS.gene78725:intron | 55.0% | |
| TTGCTGAGGTAGGGCGAAGA+TGG | + | chr5.4:42352224-42352243 | MS.gene78725:CDS | 55.0% | |
| TTTCACTCCGACCACCACAC+CGG | + | chr5.4:42346140-42346159 | MS.gene78725:intron | 55.0% | |
| ! | CTGGGTCCATTGGTTGATGC+TGG | + | chr5.4:42350038-42350057 | MS.gene78725:intron | 55.0% |
| ! | GTGTGCATTAGCTCTCTGCG+AGG | - | chr5.4:42349489-42349508 | None:intergenic | 55.0% |
| ! | TGAGTTGGGCAGAACTTGGG+TGG | + | chr5.4:42352162-42352181 | MS.gene78725:intron | 55.0% |
| !! | AGACAAAGCTGTGGTGGTGG+AGG | + | chr5.4:42345593-42345612 | MS.gene78725:CDS | 55.0% |
| !! | CATGGTGTCACTGAGCTACG+TGG | + | chr5.4:42351612-42351631 | MS.gene78725:intron | 55.0% |
| AGTCTTGGCAGAAGCCGGTG+TGG | + | chr5.4:42348807-42348826 | MS.gene78725:intron | 60.0% | |
| CAACCAATGGACCCAGGGTG+TGG | - | chr5.4:42350034-42350053 | None:intergenic | 60.0% | |
| CAAGAACAGCAGCACGGGCT+TGG | - | chr5.4:42352207-42352226 | None:intergenic | 60.0% | |
| CATGTGCATCACCGCACGGA+GGG | - | chr5.4:42350117-42350136 | None:intergenic | 60.0% | |
| CTCCGTGCGGTGATGCACAT+GGG | + | chr5.4:42350116-42350135 | MS.gene78725:intron | 60.0% | |
| GCGAATCGCTCGTGTCTGTC+TGG | + | chr5.4:42345923-42345942 | MS.gene78725:intron | 60.0% | |
| GGCTGGATGCTCGTGTGTAG+TGG | - | chr5.4:42346215-42346234 | None:intergenic | 60.0% | |
| GTTGGGCAGAACTTGGGTGG+AGG | + | chr5.4:42352165-42352184 | MS.gene78725:intron | 60.0% | |
| TTCACTCCGACCACCACACC+GGG | + | chr5.4:42346141-42346160 | MS.gene78725:intron | 60.0% | |
| ! | AGGAGCTTGCTCTGTGGCTG+GGG | - | chr5.4:42349469-42349488 | None:intergenic | 60.0% |
| ! | CCGTGCTGCTGTTCTTGCTG+AGG | + | chr5.4:42352210-42352229 | MS.gene78725:CDS | 60.0% |
| ! | GAGGAGCTTGCTCTGTGGCT+GGG | - | chr5.4:42349470-42349489 | None:intergenic | 60.0% |
| ! | TCTGCGAGGAGCTTGCTCTG+TGG | - | chr5.4:42349475-42349494 | None:intergenic | 60.0% |
| !! | CAAAGCTGTGGTGGTGGAGG+AGG | + | chr5.4:42345596-42345615 | MS.gene78725:CDS | 60.0% |
| !! | CTGTGGCTCTGACAAGTGGC+AGG | + | chr5.4:42350749-42350768 | MS.gene78725:CDS | 60.0% |
| CCATGTGCATCACCGCACGG+AGG | - | chr5.4:42350118-42350137 | None:intergenic | 65.0% | |
| CCTCCGTGCGGTGATGCACA+TGG | + | chr5.4:42350115-42350134 | MS.gene78725:intron | 65.0% | |
| CGGAGGTGGCTGTGAGAGAC+AGG | - | chr5.4:42349973-42349992 | None:intergenic | 65.0% | |
| ! | CGAGGAGCTTGCTCTGTGGC+TGG | - | chr5.4:42349471-42349490 | None:intergenic | 65.0% |
| !! | AGCTGTGGTGGTGGAGGAGG+AGG | + | chr5.4:42345599-42345618 | MS.gene78725:CDS | 65.0% |
| !! | GCGGCTGTGGCTCTGACAAG+TGG | + | chr5.4:42350745-42350764 | MS.gene78725:CDS | 65.0% |
| ATGGATGGGGCCCGGTGTGG+TGG | - | chr5.4:42346154-42346173 | None:intergenic | 70.0% | |
| ATGGGGCCCGGTGTGGTGGT+CGG | - | chr5.4:42346150-42346169 | None:intergenic | 70.0% | |
| GGCATGGATGGGGCCCGGTG+TGG | - | chr5.4:42346157-42346176 | None:intergenic | 75.0% | |
| GGGGTGGCATGGATGGGGCC+CGG | - | chr5.4:42346162-42346181 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 42345558 | 42352267 | 42345558 | ID=MS.gene78725 |
| chr5.4 | mRNA | 42345558 | 42352267 | 42345558 | ID=MS.gene78725.t1;Parent=MS.gene78725 |
| chr5.4 | exon | 42345558 | 42345663 | 42345558 | ID=MS.gene78725.t1.exon1;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42345558 | 42345663 | 42345558 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42347665 | 42347753 | 42347665 | ID=MS.gene78725.t1.exon2;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42347665 | 42347753 | 42347665 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42348414 | 42348502 | 42348414 | ID=MS.gene78725.t1.exon3;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42348414 | 42348502 | 42348414 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42348608 | 42348711 | 42348608 | ID=MS.gene78725.t1.exon4;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42348608 | 42348711 | 42348608 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42348809 | 42348911 | 42348809 | ID=MS.gene78725.t1.exon5;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42348809 | 42348911 | 42348809 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42348997 | 42349072 | 42348997 | ID=MS.gene78725.t1.exon6;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42348997 | 42349072 | 42348997 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42349178 | 42349283 | 42349178 | ID=MS.gene78725.t1.exon7;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42349178 | 42349283 | 42349178 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42350698 | 42351229 | 42350698 | ID=MS.gene78725.t1.exon8;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42350698 | 42351229 | 42350698 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| chr5.4 | exon | 42352174 | 42352267 | 42352174 | ID=MS.gene78725.t1.exon9;Parent=MS.gene78725.t1 |
| chr5.4 | CDS | 42352174 | 42352267 | 42352174 | ID=cds.MS.gene78725.t1;Parent=MS.gene78725.t1 |
| Gene Sequence |
| Protein sequence |
