Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053917.t1 | XP_003614408.1 | 97 | 432 | 12 | 1 | 1 | 432 | 115 | 545 | 6.40E-226 | 793.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053917.t1 | G7JX25 | 97.0 | 432 | 12 | 1 | 1 | 432 | 115 | 545 | 4.6e-226 | 793.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053917 | MS.gene78725 | 0.964394 | 2.85E-123 | -1.69E-46 |
| MS.gene053917 | MS.gene80097 | 0.87134 | 7.36E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053917.t1 | MTR_5g053260 | 96.991 | 432 | 12 | 1 | 1 | 432 | 115 | 545 | 0.0 | 852 |
| MS.gene053917.t1 | MTR_6g053740 | 33.418 | 392 | 253 | 4 | 41 | 427 | 427 | 815 | 1.69e-61 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053917.t1 | AT3G25680 | 53.350 | 403 | 180 | 2 | 33 | 432 | 161 | 558 | 1.36e-145 | 426 |
| MS.gene053917.t1 | AT5G23890 | 33.077 | 390 | 254 | 2 | 41 | 427 | 300 | 685 | 2.32e-62 | 216 |
| MS.gene053917.t1 | AT5G23890 | 33.162 | 389 | 253 | 2 | 41 | 426 | 424 | 808 | 9.92e-62 | 215 |
| MS.gene053917.t1 | AT5G52410 | 31.606 | 386 | 253 | 4 | 46 | 426 | 232 | 611 | 3.55e-55 | 195 |
| MS.gene053917.t1 | AT5G52410 | 31.606 | 386 | 253 | 4 | 46 | 426 | 241 | 620 | 4.27e-55 | 195 |
| MS.gene053917.t1 | AT5G52410 | 31.818 | 374 | 244 | 4 | 58 | 426 | 2 | 369 | 2.39e-54 | 189 |
Find 86 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATCTCAGGGAGTTTATT+TGG | 0.155851 | 5.3:+43005021 | MS.gene053917:CDS |
| CATTTCACGACAAGATTTAA+TGG | 0.194973 | 5.3:+43004802 | MS.gene053917:CDS |
| CCTTGAATAGACTGAAAATC+TGG | 0.271321 | 5.3:-43004492 | None:intergenic |
| GAGGAGACATACAGAAGTTT+TGG | 0.278868 | 5.3:+43006671 | MS.gene053917:CDS |
| CTCAGCTTCTAGCGTGGATT+TGG | 0.326760 | 5.3:-43006986 | None:intergenic |
| AGTGGAGCAATCCTGTGTTT+TGG | 0.332072 | 5.3:-43004414 | None:intergenic |
| CCTTGAGGCAGCAAACAATT+TGG | 0.339048 | 5.3:+43006747 | MS.gene053917:CDS |
| GCCGCTTGTGCTATTGTTGA+AGG | 0.359144 | 5.3:-43006529 | None:intergenic |
| GGAATACAAATTCACCTATC+AGG | 0.364209 | 5.3:-43004706 | None:intergenic |
| AGACTGACAATGCTTCTTCT+TGG | 0.368656 | 5.3:-43003519 | None:intergenic |
| TACATATATGACTCTCTCTA+AGG | 0.376649 | 5.3:-43006896 | None:intergenic |
| GCTCCACTTGTATCCTTGTC+TGG | 0.379649 | 5.3:+43004429 | MS.gene053917:CDS |
| TGGGTGGAATCAGCTGAAAC+AGG | 0.383185 | 5.3:-43003499 | None:intergenic |
| TGGAGAACTCAGTTGGAGTA+TGG | 0.383408 | 5.3:+43004827 | MS.gene053917:CDS |
| CCATCTAGCAAACTGTCTTC+TGG | 0.383942 | 5.3:-43004253 | None:intergenic |
| GCTATTGTTGAAGGTTTGTT+TGG | 0.388614 | 5.3:-43006520 | None:intergenic |
| GACTGACAATGCTTCTTCTT+GGG | 0.391354 | 5.3:-43003518 | None:intergenic |
| CTCTTCTGTCTCAGCTTGCC+TGG | 0.404837 | 5.3:-43006626 | None:intergenic |
| CAAGAACAGCAGCACGGGCT+TGG | 0.419286 | 5.3:-43008006 | None:intergenic |
| AGGTAGGGCGAAGATGGAAA+TGG | 0.431659 | 5.3:+43008032 | MS.gene053917:CDS |
| GTCAGTCTTAAAGAAGTTGA+AGG | 0.433222 | 5.3:+43003534 | MS.gene053917:CDS |
| CCAGAAGACAGTTTGCTAGA+TGG | 0.436376 | 5.3:+43004253 | MS.gene053917:CDS |
| ACTCTTCCAAGATAATTTGC+TGG | 0.438432 | 5.3:-43004635 | None:intergenic |
| AGCTGTGGTGGTGGAGGAGG+AGG | 0.439710 | 5.3:+43001401 | MS.gene053917:CDS |
| GCTGCTGTTCTTGCTGAGGT+AGG | 0.441580 | 5.3:+43008016 | MS.gene053917:CDS |
| AAGAAGCTCTTCAGATGCTT+AGG | 0.444868 | 5.3:+43007010 | MS.gene053917:CDS |
| CAGAACTTGGGTGGAGGATG+AGG | 0.446384 | 5.3:+43007973 | MS.gene053917:intron |
| TGTGAAAGAGATAACATCTC+AGG | 0.453337 | 5.3:+43005009 | MS.gene053917:CDS |
| GTTTATTTGGACATGTTGGC+AGG | 0.460200 | 5.3:+43005034 | MS.gene053917:CDS |
| TTGCTGAGGTAGGGCGAAGA+TGG | 0.461789 | 5.3:+43008026 | MS.gene053917:CDS |
| CTCTTCCAAGATAATTTGCT+GGG | 0.466661 | 5.3:-43004634 | None:intergenic |
| AATTAAATTAAATTCGTCGT+TGG | 0.466853 | 5.3:+43004278 | MS.gene053917:CDS |
| CAAAGCTGTGGTGGTGGAGG+AGG | 0.470832 | 5.3:+43001398 | MS.gene053917:CDS |
| GAAGAAGCCGTTATACAAAC+TGG | 0.482672 | 5.3:+43001444 | MS.gene053917:CDS |
| CTGTGGCTCTGACAAGTGGC+AGG | 0.483399 | 5.3:+43006551 | MS.gene053917:CDS |
| AACAATAGCACAAGCGGCTG+TGG | 0.484660 | 5.3:+43006534 | MS.gene053917:CDS |
| TTGGACATGTTGGCAGGAGA+TGG | 0.489679 | 5.3:+43005040 | MS.gene053917:CDS |
| CACGACAAGATTTAATGGAA+TGG | 0.501939 | 5.3:+43004807 | MS.gene053917:CDS |
| TCTTGGAAGAGTAGTTCAAA+TGG | 0.502257 | 5.3:+43004646 | MS.gene053917:CDS |
| CTGCTGTTCTTGCTGAGGTA+GGG | 0.507600 | 5.3:+43008017 | MS.gene053917:CDS |
| AATTAAATTCGTCGTTGGAA+AGG | 0.507607 | 5.3:+43004283 | MS.gene053917:CDS |
| GACGTGCCTACATTCAAGCT+TGG | 0.508002 | 5.3:-43008060 | None:intergenic |
| TGGTCCCCAGCAAATTATCT+TGG | 0.509239 | 5.3:+43004629 | MS.gene053917:CDS |
| CTCAGCAAGAACAGCAGCAC+GGG | 0.513282 | 5.3:-43008011 | None:intergenic |
| ATCAGAAACTACTGAAAAGC+CGG | 0.517346 | 5.3:+43003462 | MS.gene053917:intron |
| TTTAAAAGAACAGGCAGCAA+TGG | 0.526108 | 5.3:+43006810 | MS.gene053917:CDS |
| TTGCTTACCAGTTTGTATAA+CGG | 0.527887 | 5.3:-43001451 | None:intergenic |
| GCTAAAGTCTTGGCAGAAGC+CGG | 0.530324 | 5.3:+43004604 | MS.gene053917:intron |
| GGGAGTTTATTTGGACATGT+TGG | 0.530766 | 5.3:+43005030 | MS.gene053917:CDS |
| AATGGAATGGAGAACTCAGT+TGG | 0.531803 | 5.3:+43004820 | MS.gene053917:CDS |
| AGACAAAGCTGTGGTGGTGG+AGG | 0.532022 | 5.3:+43001395 | MS.gene053917:CDS |
| TTTCTTTGGGATAATCGACC+AGG | 0.543294 | 5.3:+43004853 | MS.gene053917:CDS |
| CCAAATTGTTTGCTGCCTCA+AGG | 0.545169 | 5.3:-43006747 | None:intergenic |
| GGTAGGGCGAAGATGGAAAT+GGG | 0.546029 | 5.3:+43008033 | MS.gene053917:CDS |
| ACAGGGATTGTAATTCGTGC+CGG | 0.547208 | 5.3:-43003481 | None:intergenic |
| AAAACTTCTGTATGTCTCCT+CGG | 0.550389 | 5.3:-43006669 | None:intergenic |
| CTTGAATAGACTGAAAATCT+GGG | 0.551420 | 5.3:-43004491 | None:intergenic |
| ACCTTCAACAATAGCACAAG+CGG | 0.555134 | 5.3:+43006528 | MS.gene053917:CDS |
| TGACAATGCTTCTTCTTGGG+TGG | 0.559213 | 5.3:-43003515 | None:intergenic |
| TGAGTTGGGCAGAACTTGGG+TGG | 0.572374 | 5.3:+43007964 | MS.gene053917:intron |
| TCGAGACAAAGCTGTGGTGG+TGG | 0.572806 | 5.3:+43001392 | MS.gene053917:CDS |
| ACTACAATTACCACCACTCA+TGG | 0.573941 | 5.3:+43001366 | MS.gene053917:CDS |
| TTGTATAACGGCTTCTTCAG+CGG | 0.575616 | 5.3:-43001439 | None:intergenic |
| TTCTTTCTCAGCTTCTAGCG+TGG | 0.584584 | 5.3:-43006992 | None:intergenic |
| GCGGCTGTGGCTCTGACAAG+TGG | 0.587899 | 5.3:+43006547 | MS.gene053917:CDS |
| GTTGGGCAGAACTTGGGTGG+AGG | 0.589062 | 5.3:+43007967 | MS.gene053917:intron |
| GTCTCGATCACCATGAGTGG+TGG | 0.602728 | 5.3:-43001376 | None:intergenic |
| CTAGATAGTTGAAGATGATG+TGG | 0.607544 | 5.3:+43004212 | MS.gene053917:intron |
| TATAACGGCTTCTTCAGCGG+TGG | 0.612339 | 5.3:-43001436 | None:intergenic |
| GAGCCAGACAAGGATACAAG+TGG | 0.613465 | 5.3:-43004432 | None:intergenic |
| CTTCCAGAAATCCAAAACAC+AGG | 0.614162 | 5.3:+43004403 | MS.gene053917:intron |
| CCTCAGCAAGAACAGCAGCA+CGG | 0.616599 | 5.3:-43008012 | None:intergenic |
| GGGTGGAATCAGCTGAAACA+GGG | 0.621108 | 5.3:-43003498 | None:intergenic |
| CCGTGCTGCTGTTCTTGCTG+AGG | 0.622982 | 5.3:+43008012 | MS.gene053917:CDS |
| TAGAAGCTGAGAATTCTGCC+AGG | 0.623746 | 5.3:+43006608 | MS.gene053917:CDS |
| TAATTTGCTGGGGACCACAC+CGG | 0.626078 | 5.3:-43004623 | None:intergenic |
| AGATCTGAGCTGCTTAGCCG+AGG | 0.628615 | 5.3:+43006652 | MS.gene053917:CDS |
| TGTGGAGAGGCTTTACCTTG+AGG | 0.631582 | 5.3:+43006732 | MS.gene053917:CDS |
| ATCACGGTTCTGATGTGGAG+AGG | 0.639626 | 5.3:+43006719 | MS.gene053917:CDS |
| GTGAAAGAGATAACATCTCA+GGG | 0.644252 | 5.3:+43005010 | MS.gene053917:CDS |
| TTTGTCTCGATCACCATGAG+TGG | 0.646744 | 5.3:-43001379 | None:intergenic |
| AGTCTTGGCAGAAGCCGGTG+TGG | 0.663623 | 5.3:+43004609 | MS.gene053917:intron |
| ATTATCTACAGAGCCAGACA+AGG | 0.678957 | 5.3:-43004442 | None:intergenic |
| TCTTCCAAGATAATTTGCTG+GGG | 0.686580 | 5.3:-43004633 | None:intergenic |
| TGATCGAGACAAAGCTGTGG+TGG | 0.689347 | 5.3:+43001389 | MS.gene053917:CDS |
| TGGTGATCGAGACAAAGCTG+TGG | 0.768511 | 5.3:+43001386 | MS.gene053917:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTAAAAACTACTATT+AGG | + | chr5.3:43002416-43002435 | MS.gene053917:intron | 10.0% |
| !!! | ATTTCATTTTTTTAATTGAT+AGG | + | chr5.3:43006032-43006051 | MS.gene053917:intron | 10.0% |
| !!! | TTCTTTATCTTTTTTTTTTT+AGG | - | chr5.3:43007390-43007409 | None:intergenic | 10.0% |
| !! | TATATTATTGAATTCAATGA+GGG | + | chr5.3:43005227-43005246 | MS.gene053917:intron | 15.0% |
| !!! | ATATTTTCTGTTTAAGATTA+AGG | + | chr5.3:43003375-43003394 | MS.gene053917:intron | 15.0% |
| !!! | GAATGGTTTTTATATATATA+AGG | + | chr5.3:43003570-43003589 | MS.gene053917:intron | 15.0% |
| !!! | TAATTTTTAAATATGCATGA+TGG | + | chr5.3:43004906-43004925 | MS.gene053917:intron | 15.0% |
| !!! | TCTTTTTTAACAATATCAAA+TGG | + | chr5.3:43006254-43006273 | MS.gene053917:intron | 15.0% |
| !!! | TGTAAACATCAAATTTTATT+CGG | + | chr5.3:43002756-43002775 | MS.gene053917:intron | 15.0% |
| !!! | TTATATTTTTCTCTAATTAG+AGG | + | chr5.3:43005737-43005756 | MS.gene053917:intron | 15.0% |
| !! | AAAAAAAGGATGAAGATATT+TGG | - | chr5.3:43003433-43003452 | None:intergenic | 20.0% |
| !! | AAAAAGATAAAGAAACAACA+TGG | + | chr5.3:43007396-43007415 | MS.gene053917:intron | 20.0% |
| !! | AAACAATTTATATTCAGTTG+TGG | - | chr5.3:43007870-43007889 | None:intergenic | 20.0% |
| !! | AATTAAATTAAATTCGTCGT+TGG | + | chr5.3:43004278-43004297 | MS.gene053917:CDS | 20.0% |
| !! | AGCCTAAAAGATAAAATAAT+AGG | - | chr5.3:43006399-43006418 | None:intergenic | 20.0% |
| !! | ATTAGAGAAAAATATAAGAG+AGG | - | chr5.3:43005734-43005753 | None:intergenic | 20.0% |
| !! | ATTCAAGGTAATAAAAGTTA+TGG | + | chr5.3:43004507-43004526 | MS.gene053917:intron | 20.0% |
| !! | CTTAAACAGAAATTATCAAA+AGG | - | chr5.3:43007504-43007523 | None:intergenic | 20.0% |
| !! | GTATATTATTGAATTCAATG+AGG | + | chr5.3:43005226-43005245 | MS.gene053917:intron | 20.0% |
| !! | TATAAGAGAAACTATTAAGA+AGG | + | chr5.3:43003204-43003223 | MS.gene053917:intron | 20.0% |
| !! | TATTGAGATGTCATTATATT+TGG | + | chr5.3:43003702-43003721 | MS.gene053917:intron | 20.0% |
| !! | TTAAATAGCAACCATATTTA+GGG | + | chr5.3:43002518-43002537 | MS.gene053917:intron | 20.0% |
| !! | TTAGAGAAAAATATAAGAGA+GGG | - | chr5.3:43005733-43005752 | None:intergenic | 20.0% |
| !!! | ACATAATTTTTTTTCCTGAT+AGG | + | chr5.3:43004692-43004711 | MS.gene053917:CDS | 20.0% |
| !!! | ACATTTAATTCTAGTTCAAA+TGG | + | chr5.3:43002795-43002814 | MS.gene053917:intron | 20.0% |
| !!! | AGAATATTTTCTGTTAGAAA+TGG | - | chr5.3:43005317-43005336 | None:intergenic | 20.0% |
| !!! | ATATTCTTTTCATTACTTTC+AGG | + | chr5.3:43002315-43002334 | MS.gene053917:intron | 20.0% |
| !!! | ATTATTTTATCTTTTAGGCT+AGG | + | chr5.3:43006399-43006418 | MS.gene053917:intron | 20.0% |
| !!! | ATTGTAAATGTATTTTGAGT+TGG | + | chr5.3:43007949-43007968 | MS.gene053917:intron | 20.0% |
| !!! | CAGTTTTTTCTTTTTCTTTT+TGG | + | chr5.3:43003679-43003698 | MS.gene053917:intron | 20.0% |
| !!! | GAATATTTTCTGTTAGAAAT+GGG | - | chr5.3:43005316-43005335 | None:intergenic | 20.0% |
| !!! | GTTGAATGGAATTTTTTTAT+CGG | + | chr5.3:43002862-43002881 | MS.gene053917:intron | 20.0% |
| !!! | TAAATAGTTTGTCAAAAGAT+TGG | - | chr5.3:43007471-43007490 | None:intergenic | 20.0% |
| !!! | TATTCTTTTCATTACTTTCA+GGG | + | chr5.3:43002316-43002335 | MS.gene053917:intron | 20.0% |
| !!! | TGATGATTCTAAAAACATTA+AGG | - | chr5.3:43002696-43002715 | None:intergenic | 20.0% |
| !!! | TGCCTATTATTTTATCTTTT+AGG | + | chr5.3:43006394-43006413 | MS.gene053917:intron | 20.0% |
| !!! | TTAATGTTTTTAGAATCATC+AGG | + | chr5.3:43002695-43002714 | MS.gene053917:intron | 20.0% |
| !!! | TTATTTTATCTTTTAGGCTA+GGG | + | chr5.3:43006400-43006419 | MS.gene053917:intron | 20.0% |
| !!! | TTGTAAATGTATTTTGAGTT+GGG | + | chr5.3:43007950-43007969 | MS.gene053917:intron | 20.0% |
| !!! | TTTTATAAAGACAAGTAGTT+AGG | + | chr5.3:43004883-43004902 | MS.gene053917:intron | 20.0% |
| !!! | TTTTTTAATTGATAGGAATC+CGG | + | chr5.3:43006039-43006058 | MS.gene053917:intron | 20.0% |
| ! | AAAAACTACTATTAGGATAC+TGG | + | chr5.3:43002423-43002442 | MS.gene053917:intron | 25.0% |
| ! | AAAACTACTATTAGGATACT+GGG | + | chr5.3:43002424-43002443 | MS.gene053917:intron | 25.0% |
| ! | AAATCAAGATAGTAACTGAA+TGG | - | chr5.3:43007087-43007106 | None:intergenic | 25.0% |
| ! | AACTCTATAAGTCAAAGATA+CGG | - | chr5.3:43007924-43007943 | None:intergenic | 25.0% |
| ! | AAGAGAAACATCAATACATA+CGG | - | chr5.3:43005110-43005129 | None:intergenic | 25.0% |
| ! | AAGTTATTTGAGTGGTTAAT+GGG | - | chr5.3:43005593-43005612 | None:intergenic | 25.0% |
| ! | AATCAAAAAAGCAGGTTATA+TGG | + | chr5.3:43004985-43005004 | MS.gene053917:CDS | 25.0% |
| ! | AGACAATATTCACAACAAAT+AGG | - | chr5.3:43001491-43001510 | None:intergenic | 25.0% |
| ! | AGATAAGATATGATCATGAA+TGG | - | chr5.3:43007641-43007660 | None:intergenic | 25.0% |
| ! | ATAAAACAAGCAAGAATTGA+GGG | + | chr5.3:43003903-43003922 | MS.gene053917:intron | 25.0% |
| ! | ATAGGTCTAATCTCAATAAA+GGG | + | chr5.3:43002448-43002467 | MS.gene053917:intron | 25.0% |
| ! | ATATGATCATGAATGGAAAT+AGG | - | chr5.3:43007634-43007653 | None:intergenic | 25.0% |
| ! | ATGACTAATAGAAGATAGAT+TGG | + | chr5.3:43002266-43002285 | MS.gene053917:intron | 25.0% |
| ! | ATGGAAATCTAGATGTATTA+CGG | - | chr5.3:43002616-43002635 | None:intergenic | 25.0% |
| ! | ATTAGTGAAGAGAAAAATCA+CGG | + | chr5.3:43006703-43006722 | MS.gene053917:CDS | 25.0% |
| ! | CACTATAAAACATTCAAAGA+CGG | + | chr5.3:43002349-43002368 | MS.gene053917:intron | 25.0% |
| ! | GTTAAATAGCAACCATATTT+AGG | + | chr5.3:43002517-43002536 | MS.gene053917:intron | 25.0% |
| ! | TAAATAGCAACCATATTTAG+GGG | + | chr5.3:43002519-43002538 | MS.gene053917:intron | 25.0% |
| ! | TAATGAAGAATGATCATATG+AGG | + | chr5.3:43006449-43006468 | MS.gene053917:intron | 25.0% |
| ! | TATAAGAAATTGCACTAATC+TGG | - | chr5.3:43007582-43007601 | None:intergenic | 25.0% |
| ! | TATAGGTCTAATCTCAATAA+AGG | + | chr5.3:43002447-43002466 | MS.gene053917:intron | 25.0% |
| ! | TATCCATAACTAATTCTGTT+TGG | - | chr5.3:43005406-43005425 | None:intergenic | 25.0% |
| ! | TCAAATTACATTGTACTGAA+TGG | + | chr5.3:43004751-43004770 | MS.gene053917:intron | 25.0% |
| ! | TTAAATGTTTCGATCAAAAC+TGG | - | chr5.3:43002783-43002802 | None:intergenic | 25.0% |
| ! | TTCTTACGAACAATAACAAT+TGG | + | chr5.3:43005149-43005168 | MS.gene053917:intron | 25.0% |
| ! | TTTGACAAATCAACATCTTA+AGG | + | chr5.3:43002173-43002192 | MS.gene053917:intron | 25.0% |
| !! | ACAAAGAAACCCATTTTAAA+TGG | - | chr5.3:43004383-43004402 | None:intergenic | 25.0% |
| !! | ACCAAGATAAAAGCATAAAA+TGG | - | chr5.3:43006346-43006365 | None:intergenic | 25.0% |
| !! | ACTATATTAGGTTTTCTAAC+TGG | + | chr5.3:43006114-43006133 | MS.gene053917:intron | 25.0% |
| !! | AGTATACTCAGAAAAGTTTT+TGG | + | chr5.3:43005064-43005083 | MS.gene053917:CDS | 25.0% |
| !! | ATTTCTGTTTAAGTTCTCTT+TGG | + | chr5.3:43007511-43007530 | MS.gene053917:intron | 25.0% |
| !! | CCAAGATAAAAGCATAAAAT+GGG | - | chr5.3:43006345-43006364 | None:intergenic | 25.0% |
| !! | CTATATTAGGTTTTCTAACT+GGG | + | chr5.3:43006115-43006134 | MS.gene053917:intron | 25.0% |
| !! | GTCTAACTTAGTAATTTTCT+GGG | + | chr5.3:43003987-43004006 | MS.gene053917:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr5.3:43003196-43003215 | None:intergenic | 25.0% |
| !! | TAGCATCACTGAAATTTTTA+AGG | + | chr5.3:43002073-43002092 | MS.gene053917:intron | 25.0% |
| !! | TTGTGAATTAACTGTTTTAC+AGG | + | chr5.3:43006478-43006497 | MS.gene053917:intron | 25.0% |
| !! | TTTTGATAGAACAAACACTA+TGG | + | chr5.3:43003261-43003280 | MS.gene053917:intron | 25.0% |
| !!! | ACGATTTTGAAATAGGAATT+GGG | - | chr5.3:43007117-43007136 | None:intergenic | 25.0% |
| !!! | CACTGAAATTTTTAAGGTTA+AGG | + | chr5.3:43002079-43002098 | MS.gene053917:intron | 25.0% |
| !!! | TGAAATTTTTAAGGTTAAGG+AGG | + | chr5.3:43002082-43002101 | MS.gene053917:intron | 25.0% |
| !!! | TGGCTTTTGAAAAAATCTAT+TGG | - | chr5.3:43007780-43007799 | None:intergenic | 25.0% |
| !!! | TTTAATTCTAGTTCAAATGG+AGG | + | chr5.3:43002798-43002817 | MS.gene053917:intron | 25.0% |
| !!! | TTTTTAATTGATAGGAATCC+GGG | + | chr5.3:43006040-43006059 | MS.gene053917:intron | 25.0% |
| AAAATTCCATTCAACTTGAG+TGG | - | chr5.3:43002857-43002876 | None:intergenic | 30.0% | |
| AAACTGAAAATGAGAAGGAT+TGG | - | chr5.3:43001925-43001944 | None:intergenic | 30.0% | |
| AAATAAGTGTAGCAAAGATG+AGG | + | chr5.3:43002951-43002970 | MS.gene053917:intron | 30.0% | |
| AAGAAGGATCTAGAGATTAA+TGG | + | chr5.3:43003220-43003239 | MS.gene053917:intron | 30.0% | |
| AATATTCACAACAAATAGGC+TGG | - | chr5.3:43001487-43001506 | None:intergenic | 30.0% | |
| AATTAAATTCGTCGTTGGAA+AGG | + | chr5.3:43004283-43004302 | MS.gene053917:CDS | 30.0% | |
| ACACCTATAGTAGAAAAGAT+GGG | + | chr5.3:43003055-43003074 | MS.gene053917:intron | 30.0% | |
| ACATGTTGCTAAATTCAACT+CGG | + | chr5.3:43001645-43001664 | MS.gene053917:intron | 30.0% | |
| ACCCAAAATCAAGTTTCTTA+TGG | + | chr5.3:43004542-43004561 | MS.gene053917:intron | 30.0% | |
| ACTAATAGAAGATAGATTGG+AGG | + | chr5.3:43002269-43002288 | MS.gene053917:intron | 30.0% | |
| AGAAGGATCTAGAGATTAAT+GGG | + | chr5.3:43003221-43003240 | MS.gene053917:intron | 30.0% | |
| AGAGAAACATCAATACATAC+GGG | - | chr5.3:43005109-43005128 | None:intergenic | 30.0% | |
| AGTGATTGCTGAACTATATT+AGG | + | chr5.3:43006102-43006121 | MS.gene053917:intron | 30.0% | |
| ATTCCTATTTCAAAATCGTG+AGG | + | chr5.3:43007118-43007137 | MS.gene053917:intron | 30.0% | |
| ATTGATCAATCTCTGGATAA+AGG | + | chr5.3:43005439-43005458 | MS.gene053917:intron | 30.0% | |
| ATTGTTCGTAAGAAACGAAA+AGG | - | chr5.3:43005143-43005162 | None:intergenic | 30.0% | |
| CATTTCACGACAAGATTTAA+TGG | + | chr5.3:43004802-43004821 | MS.gene053917:CDS | 30.0% | |
| CCAGTACATTGAACTAAATA+AGG | - | chr5.3:43003795-43003814 | None:intergenic | 30.0% | |
| CCCAAAATCAAGTTTCTTAT+GGG | + | chr5.3:43004543-43004562 | MS.gene053917:intron | 30.0% | |
| CTATGGTAGCTAAATAATTG+TGG | + | chr5.3:43007216-43007235 | MS.gene053917:intron | 30.0% | |
| CTTGAATAGACTGAAAATCT+GGG | - | chr5.3:43004494-43004513 | None:intergenic | 30.0% | |
| GAAGTTATTTGAGTGGTTAA+TGG | - | chr5.3:43005594-43005613 | None:intergenic | 30.0% | |
| GAATGTTATTGATCAATCTC+TGG | + | chr5.3:43005432-43005451 | MS.gene053917:intron | 30.0% | |
| GAATTGTAGGCTTGAAATTA+TGG | + | chr5.3:43004174-43004193 | MS.gene053917:intron | 30.0% | |
| GAGTGAACAATTAAACATAG+TGG | - | chr5.3:43006214-43006233 | None:intergenic | 30.0% | |
| GATAAAACAAGCAAGAATTG+AGG | + | chr5.3:43003902-43003921 | MS.gene053917:intron | 30.0% | |
| GGTAAGTTTATTCGAGAAAT+AGG | - | chr5.3:43005815-43005834 | None:intergenic | 30.0% | |
| GTACCAAACAGAATTAGTTA+TGG | + | chr5.3:43005400-43005419 | MS.gene053917:intron | 30.0% | |
| GTGTTTACTACTTTACTCTA+AGG | - | chr5.3:43001681-43001700 | None:intergenic | 30.0% | |
| TACATATATGACTCTCTCTA+AGG | - | chr5.3:43006899-43006918 | None:intergenic | 30.0% | |
| TACCATAGCAATGTAAACTT+TGG | - | chr5.3:43007204-43007223 | None:intergenic | 30.0% | |
| TAGGTCTAATCTCAATAAAG+GGG | + | chr5.3:43002449-43002468 | MS.gene053917:intron | 30.0% | |
| TCATGATCATATCTTATCTC+CGG | + | chr5.3:43007642-43007661 | MS.gene053917:intron | 30.0% | |
| TCTAAAAACATTAAGGACAG+TGG | - | chr5.3:43002689-43002708 | None:intergenic | 30.0% | |
| TGTAACATTCTGATAGAAAC+TGG | + | chr5.3:43005378-43005397 | MS.gene053917:intron | 30.0% | |
| TGTCGCATAAACATAATTCT+GGG | - | chr5.3:43006083-43006102 | None:intergenic | 30.0% | |
| TGTGAAGATTATAAGAGCAA+TGG | - | chr5.3:43004730-43004749 | None:intergenic | 30.0% | |
| TTGAATTCAATGAGGGTTTA+CGG | + | chr5.3:43005234-43005253 | MS.gene053917:intron | 30.0% | |
| TTGCTTACCAGTTTGTATAA+CGG | - | chr5.3:43001454-43001473 | None:intergenic | 30.0% | |
| TTTATCTTGGTCTGTAAACT+GGG | + | chr5.3:43006355-43006374 | MS.gene053917:intron | 30.0% | |
| ! | AACAGTTGATACACTTTGTA+CGG | - | chr5.3:43002588-43002607 | None:intergenic | 30.0% |
| ! | AATTTAGAGCTCAAACATGT+TGG | + | chr5.3:43004345-43004364 | MS.gene053917:intron | 30.0% |
| ! | ACACTTATTTAAGTTCGTGT+TGG | - | chr5.3:43002941-43002960 | None:intergenic | 30.0% |
| ! | ATCTGAAATTCTTTGCTCTT+GGG | + | chr5.3:43007547-43007566 | MS.gene053917:intron | 30.0% |
| ! | CCCATAAGAAACTTGATTTT+GGG | - | chr5.3:43004546-43004565 | None:intergenic | 30.0% |
| ! | CCCATTTTATGCTTTTATCT+TGG | + | chr5.3:43006342-43006361 | MS.gene053917:intron | 30.0% |
| ! | CCTTATTTAGTTCAATGTAC+TGG | + | chr5.3:43003792-43003811 | MS.gene053917:intron | 30.0% |
| ! | CGTCTAACTTAGTAATTTTC+TGG | + | chr5.3:43003986-43004005 | MS.gene053917:intron | 30.0% |
| ! | TGGAGTATGGATTTTTCTTT+GGG | + | chr5.3:43004840-43004859 | MS.gene053917:CDS | 30.0% |
| ! | TTGGAGTATGGATTTTTCTT+TGG | + | chr5.3:43004839-43004858 | MS.gene053917:CDS | 30.0% |
| ! | TTTAATACCTGTTGTTTAGC+TGG | + | chr5.3:43001557-43001576 | MS.gene053917:intron | 30.0% |
| ! | TTTTATCTTGGTCTGTAAAC+TGG | + | chr5.3:43006354-43006373 | MS.gene053917:intron | 30.0% |
| !! | AAGGTTTGTTTCTAGAAGAA+TGG | + | chr5.3:43003553-43003572 | MS.gene053917:intron | 30.0% |
| !! | AATGAAAGCATTAAAGAGAG+AGG | + | chr5.3:43003019-43003038 | MS.gene053917:intron | 30.0% |
| !! | ATGAAAGCATTAAAGAGAGA+GGG | + | chr5.3:43003020-43003039 | MS.gene053917:intron | 30.0% |
| !! | TGTAATTTGTTCTCTCACAT+TGG | + | chr5.3:43004095-43004114 | MS.gene053917:intron | 30.0% |
| !! | TGTGGTTTTACCATTCAATT+TGG | + | chr5.3:43002116-43002135 | MS.gene053917:intron | 30.0% |
| !!! | AATCCTCACGATTTTGAAAT+AGG | - | chr5.3:43007124-43007143 | None:intergenic | 30.0% |
| !!! | AGTTTTTGGTATGATCTCTT+AGG | + | chr5.3:43005078-43005097 | MS.gene053917:intron | 30.0% |
| !!! | CACGATTTTGAAATAGGAAT+TGG | - | chr5.3:43007118-43007137 | None:intergenic | 30.0% |
| !!! | CGCTGATTTTTTAAAAGAAC+AGG | + | chr5.3:43006801-43006820 | MS.gene053917:CDS | 30.0% |
| !!! | GGAATTTTTTTATCGGAAAG+TGG | + | chr5.3:43002869-43002888 | MS.gene053917:intron | 30.0% |
| AAAACTTCTGTATGTCTCCT+CGG | - | chr5.3:43006672-43006691 | None:intergenic | 35.0% | |
| AAAGAATTTCAGATGCAGGA+GGG | - | chr5.3:43007541-43007560 | None:intergenic | 35.0% | |
| AAAGCCACAATAGTGATTAG+TGG | + | chr5.3:43007146-43007165 | MS.gene053917:intron | 35.0% | |
| AACATCTCAGGGAGTTTATT+TGG | + | chr5.3:43005021-43005040 | MS.gene053917:CDS | 35.0% | |
| AACTCATGTTCTGTCTTTGA+TGG | + | chr5.3:43001812-43001831 | MS.gene053917:intron | 35.0% | |
| AACTGGGTTAATGAATGAAG+TGG | + | chr5.3:43006371-43006390 | MS.gene053917:intron | 35.0% | |
| AAGCCACAATAGTGATTAGT+GGG | + | chr5.3:43007147-43007166 | MS.gene053917:intron | 35.0% | |
| ACACTGATGTAAAATACCCA+GGG | + | chr5.3:43001873-43001892 | MS.gene053917:intron | 35.0% | |
| ACTATTAGGATACTGGGTAT+AGG | + | chr5.3:43002430-43002449 | MS.gene053917:intron | 35.0% | |
| AGAAACATCAATACATACGG+GGG | - | chr5.3:43005107-43005126 | None:intergenic | 35.0% | |
| AGACTATGTAGGAAAAGACA+TGG | - | chr5.3:43005633-43005652 | None:intergenic | 35.0% | |
| AGGAAAAGACATGGGAAAAT+TGG | - | chr5.3:43005624-43005643 | None:intergenic | 35.0% | |
| AGGTTTCTGTGTAGAAAATG+AGG | - | chr5.3:43001985-43002004 | None:intergenic | 35.0% | |
| AGTAAGGAGAATAGATCAGA+TGG | + | chr5.3:43003133-43003152 | MS.gene053917:intron | 35.0% | |
| ATCAGAAACTACTGAAAAGC+CGG | + | chr5.3:43003462-43003481 | MS.gene053917:intron | 35.0% | |
| ATGAGATGTAGCACTATTGA+TGG | - | chr5.3:43002635-43002654 | None:intergenic | 35.0% | |
| CACAAATTTATGCCTACCAT+AGG | - | chr5.3:43004046-43004065 | None:intergenic | 35.0% | |
| CACACCTATAGTAGAAAAGA+TGG | + | chr5.3:43003054-43003073 | MS.gene053917:intron | 35.0% | |
| CACGACAAGATTTAATGGAA+TGG | + | chr5.3:43004807-43004826 | MS.gene053917:CDS | 35.0% | |
| CAGGTATCAATCAAAAAAGC+AGG | + | chr5.3:43004977-43004996 | MS.gene053917:intron | 35.0% | |
| CATGATCATATCTTATCTCC+GGG | + | chr5.3:43007643-43007662 | MS.gene053917:intron | 35.0% | |
| CCACTCAAATAACTTCCTAA+TGG | + | chr5.3:43005598-43005617 | MS.gene053917:intron | 35.0% | |
| CCATTAGGAAGTTATTTGAG+TGG | - | chr5.3:43005601-43005620 | None:intergenic | 35.0% | |
| CCTATTCAATGCTAAAGTCT+TGG | + | chr5.3:43004594-43004613 | MS.gene053917:intron | 35.0% | |
| CCTCAAACAAAGAGAGAAAT+CGG | - | chr5.3:43006151-43006170 | None:intergenic | 35.0% | |
| CCTTGAATAGACTGAAAATC+TGG | - | chr5.3:43004495-43004514 | None:intergenic | 35.0% | |
| CTAGATAGTTGAAGATGATG+TGG | + | chr5.3:43004212-43004231 | MS.gene053917:intron | 35.0% | |
| CTCAAACAAAGAGAGAAATC+GGG | - | chr5.3:43006150-43006169 | None:intergenic | 35.0% | |
| CTGATATGCAGGGTAAAAAA+AGG | - | chr5.3:43003447-43003466 | None:intergenic | 35.0% | |
| CTGTCGCATAAACATAATTC+TGG | - | chr5.3:43006084-43006103 | None:intergenic | 35.0% | |
| CTTCAATGCAAGTTTGAATC+TGG | - | chr5.3:43002047-43002066 | None:intergenic | 35.0% | |
| CTTGAGAATTTCTGCATGAA+GGG | + | chr5.3:43004010-43004029 | MS.gene053917:intron | 35.0% | |
| GACAAATCAACATCTTAAGG+TGG | + | chr5.3:43002176-43002195 | MS.gene053917:intron | 35.0% | |
| GACTATGTAGGAAAAGACAT+GGG | - | chr5.3:43005632-43005651 | None:intergenic | 35.0% | |
| GAGAAACATCAATACATACG+GGG | - | chr5.3:43005108-43005127 | None:intergenic | 35.0% | |
| GAGTGAAACTGAAAATGAGA+AGG | - | chr5.3:43001930-43001949 | None:intergenic | 35.0% | |
| GCAAGTTTGAATCTGGTAAT+GGG | - | chr5.3:43002040-43002059 | None:intergenic | 35.0% | |
| GGAATACAAATTCACCTATC+AGG | - | chr5.3:43004709-43004728 | None:intergenic | 35.0% | |
| GGAGTCATTTGTTTCGATAT+TGG | + | chr5.3:43003833-43003852 | MS.gene053917:intron | 35.0% | |
| GGTTTCTGTGTAGAAAATGA+GGG | - | chr5.3:43001984-43002003 | None:intergenic | 35.0% | |
| GTCAGTCTTAAAGAAGTTGA+AGG | + | chr5.3:43003534-43003553 | MS.gene053917:CDS | 35.0% | |
| GTCCAAAGTTTACATTGCTA+TGG | + | chr5.3:43007199-43007218 | MS.gene053917:intron | 35.0% | |
| GTGAAAGAGATAACATCTCA+GGG | + | chr5.3:43005010-43005029 | MS.gene053917:CDS | 35.0% | |
| GTGTTTACTACCTTACTCTA+AGG | - | chr5.3:43001533-43001552 | None:intergenic | 35.0% | |
| GTTTCTGTGTAGAAAATGAG+GGG | - | chr5.3:43001983-43002002 | None:intergenic | 35.0% | |
| TAACTGAATGGATACTTGAC+TGG | - | chr5.3:43007075-43007094 | None:intergenic | 35.0% | |
| TAGACAGACTCTCCAAAAAA+TGG | - | chr5.3:43001755-43001774 | None:intergenic | 35.0% | |
| TATTTGAGTGGTTAATGGGA+GGG | - | chr5.3:43005589-43005608 | None:intergenic | 35.0% | |
| TCAAACTGATGCAACACATT+AGG | - | chr5.3:43002158-43002177 | None:intergenic | 35.0% | |
| TCAAAGATACGGTACTAATC+TGG | - | chr5.3:43007913-43007932 | None:intergenic | 35.0% | |
| TCAGTAGTTTCTGATATGCA+GGG | - | chr5.3:43003457-43003476 | None:intergenic | 35.0% | |
| TCTTGGAAGAGTAGTTCAAA+TGG | + | chr5.3:43004646-43004665 | MS.gene053917:CDS | 35.0% | |
| TCTTTATAAAACCACGTACC+TGG | - | chr5.3:43004874-43004893 | None:intergenic | 35.0% | |
| TGACAGCTATCAAGATTTCA+CGG | + | chr5.3:43002209-43002228 | MS.gene053917:intron | 35.0% | |
| TGCAAGTTTGAATCTGGTAA+TGG | - | chr5.3:43002041-43002060 | None:intergenic | 35.0% | |
| TGTGAAAGAGATAACATCTC+AGG | + | chr5.3:43005009-43005028 | MS.gene053917:CDS | 35.0% | |
| TTACCATTCAATTTGGTCCT+TGG | + | chr5.3:43002123-43002142 | MS.gene053917:intron | 35.0% | |
| TTATTTGAGTGGTTAATGGG+AGG | - | chr5.3:43005590-43005609 | None:intergenic | 35.0% | |
| TTCAGTAGTTTCTGATATGC+AGG | - | chr5.3:43003458-43003477 | None:intergenic | 35.0% | |
| TTGTGACAAAAGATGAATCC+CGG | - | chr5.3:43007664-43007683 | None:intergenic | 35.0% | |
| TTTAAAAGAACAGGCAGCAA+TGG | + | chr5.3:43006810-43006829 | MS.gene053917:CDS | 35.0% | |
| TTTATCGGAAAGTGGTAAGA+CGG | + | chr5.3:43002877-43002896 | MS.gene053917:intron | 35.0% | |
| ! | AAGGAGGATGAACAATTTTG+TGG | + | chr5.3:43002098-43002117 | MS.gene053917:intron | 35.0% |
| ! | ACTCTTCCAAGATAATTTGC+TGG | - | chr5.3:43004638-43004657 | None:intergenic | 35.0% |
| ! | AGGAGACATACAGAAGTTTT+GGG | + | chr5.3:43006672-43006691 | MS.gene053917:CDS | 35.0% |
| ! | CAAGTTTGAATCTGGTAATG+GGG | - | chr5.3:43002039-43002058 | None:intergenic | 35.0% |
| ! | CATCTGAAATTCTTTGCTCT+TGG | + | chr5.3:43007546-43007565 | MS.gene053917:intron | 35.0% |
| ! | CCAAGACTTTAGCATTGAAT+AGG | - | chr5.3:43004597-43004616 | None:intergenic | 35.0% |
| ! | CCAGATTTTCAGTCTATTCA+AGG | + | chr5.3:43004492-43004511 | MS.gene053917:CDS | 35.0% |
| ! | CGATTTCTCTCTTTGTTTGA+GGG | + | chr5.3:43006149-43006168 | MS.gene053917:intron | 35.0% |
| ! | CTACCCATCTTTTCTACTAT+AGG | - | chr5.3:43003061-43003080 | None:intergenic | 35.0% |
| ! | GAGTTACGATTTTCACTTCA+TGG | - | chr5.3:43005965-43005984 | None:intergenic | 35.0% |
| ! | GCCCATAAGAAACTTGATTT+TGG | - | chr5.3:43004547-43004566 | None:intergenic | 35.0% |
| ! | GCTATTGTTGAAGGTTTGTT+TGG | - | chr5.3:43006523-43006542 | None:intergenic | 35.0% |
| !! | AAAGTACCACTCAAGTTGAA+TGG | + | chr5.3:43002848-43002867 | MS.gene053917:intron | 35.0% |
| !! | AAGTTTGAATCTGGTAATGG+GGG | - | chr5.3:43002038-43002057 | None:intergenic | 35.0% |
| !! | AATCCTGTGTTTTGGATTTC+TGG | - | chr5.3:43004409-43004428 | None:intergenic | 35.0% |
| !! | CTCTTCCAAGATAATTTGCT+GGG | - | chr5.3:43004637-43004656 | None:intergenic | 35.0% |
| !! | GCAGAAAGTATTAGAAAGAG+TGG | + | chr5.3:43005505-43005524 | MS.gene053917:intron | 35.0% |
| !! | GCATAAATTTGTGCTGCTTA+GGG | + | chr5.3:43004053-43004072 | MS.gene053917:intron | 35.0% |
| !! | TCTTCCAAGATAATTTGCTG+GGG | - | chr5.3:43004636-43004655 | None:intergenic | 35.0% |
| !!! | AAGGTTTGGAGTTGGTATTT+TGG | + | chr5.3:43007170-43007189 | MS.gene053917:intron | 35.0% |
| !!! | CGCACAGTTTTGTTTAAATC+TGG | - | chr5.3:43007800-43007819 | None:intergenic | 35.0% |
| !!! | CTGCTTTTTTGATTGATACC+TGG | - | chr5.3:43004979-43004998 | None:intergenic | 35.0% |
| !!! | CTGTCTGGTAAACCATTTTT+TGG | + | chr5.3:43001740-43001759 | MS.gene053917:intron | 35.0% |
| !!! | TTGGAGTTGGTATTTTGGTT+TGG | + | chr5.3:43007175-43007194 | MS.gene053917:intron | 35.0% |
| AAACTGGTAAGCAACCACAA+TGG | + | chr5.3:43001460-43001479 | MS.gene053917:intron | 40.0% | |
| AAATCACTAGTGGTAGGGTA+GGG | + | chr5.3:43003165-43003184 | MS.gene053917:intron | 40.0% | |
| AAGAAGCTCTTCAGATGCTT+AGG | + | chr5.3:43007010-43007029 | MS.gene053917:CDS | 40.0% | |
| AAGCATTAAAGAGAGAGGGT+TGG | + | chr5.3:43003024-43003043 | MS.gene053917:intron | 40.0% | |
| AAGGAGAATAGATCAGATGG+AGG | + | chr5.3:43003136-43003155 | MS.gene053917:intron | 40.0% | |
| AATGGAATGGAGAACTCAGT+TGG | + | chr5.3:43004820-43004839 | MS.gene053917:CDS | 40.0% | |
| AATTCAATGAGGGTTTACGG+AGG | + | chr5.3:43005237-43005256 | MS.gene053917:intron | 40.0% | |
| ACATGGGAAAATTGGCCATT+AGG | - | chr5.3:43005616-43005635 | None:intergenic | 40.0% | |
| ACCTGGACTGTAAAAAAGTC+AGG | - | chr5.3:43004962-43004981 | None:intergenic | 40.0% | |
| ACCTTCAACAATAGCACAAG+CGG | + | chr5.3:43006528-43006547 | MS.gene053917:CDS | 40.0% | |
| ACTACAATTACCACCACTCA+TGG | + | chr5.3:43001366-43001385 | MS.gene053917:CDS | 40.0% | |
| AGACTGACAATGCTTCTTCT+TGG | - | chr5.3:43003522-43003541 | None:intergenic | 40.0% | |
| AGCATTAAAGAGAGAGGGTT+GGG | + | chr5.3:43003025-43003044 | MS.gene053917:intron | 40.0% | |
| AGCGATTCGCAATACTTGAA+GGG | - | chr5.3:43001715-43001734 | None:intergenic | 40.0% | |
| AGGAGAATAGATCAGATGGA+GGG | + | chr5.3:43003137-43003156 | MS.gene053917:intron | 40.0% | |
| AGGGTTATTCCTATGCATCT+AGG | + | chr5.3:43006419-43006438 | MS.gene053917:intron | 40.0% | |
| ATAGCAACCATATTTAGGGG+AGG | + | chr5.3:43002522-43002541 | MS.gene053917:intron | 40.0% | |
| ATGCCAAGGACCAAATTGAA+TGG | - | chr5.3:43002129-43002148 | None:intergenic | 40.0% | |
| ATTATCTACAGAGCCAGACA+AGG | - | chr5.3:43004445-43004464 | None:intergenic | 40.0% | |
| ATTCAAAGATCGCAGGATTG+TGG | - | chr5.3:43005894-43005913 | None:intergenic | 40.0% | |
| CAAAGAATTTCAGATGCAGG+AGG | - | chr5.3:43007542-43007561 | None:intergenic | 40.0% | |
| CAAAGATGAGGATGTTGTGT+TGG | + | chr5.3:43002963-43002982 | MS.gene053917:intron | 40.0% | |
| CAAGCAAGAATTGAGGGAAA+AGG | + | chr5.3:43003909-43003928 | MS.gene053917:intron | 40.0% | |
| CACAATAGTGATTAGTGGGA+AGG | + | chr5.3:43007151-43007170 | MS.gene053917:intron | 40.0% | |
| CACACTGATGTAAAATACCC+AGG | + | chr5.3:43001872-43001891 | MS.gene053917:intron | 40.0% | |
| CACGTTAGTGACTCAAACAA+AGG | + | chr5.3:43001899-43001918 | MS.gene053917:intron | 40.0% | |
| CAGACAAGTAGTATTCACCT+AGG | + | chr5.3:43003593-43003612 | MS.gene053917:intron | 40.0% | |
| CCAATTCTTGAAGAACCCAT+TGG | - | chr5.3:43005552-43005571 | None:intergenic | 40.0% | |
| CTCCTTACTATAGAATCCAC+AGG | - | chr5.3:43003122-43003141 | None:intergenic | 40.0% | |
| CTTAGTTGCTTAACTCTGAG+AGG | + | chr5.3:43001838-43001857 | MS.gene053917:intron | 40.0% | |
| CTTCCAGAAATCCAAAACAC+AGG | + | chr5.3:43004403-43004422 | MS.gene053917:intron | 40.0% | |
| CTTCCCACTAATCACTATTG+TGG | - | chr5.3:43007153-43007172 | None:intergenic | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | + | chr5.3:43003080-43003099 | MS.gene053917:intron | 40.0% | |
| GAAGAAGCCGTTATACAAAC+TGG | + | chr5.3:43001444-43001463 | MS.gene053917:CDS | 40.0% | |
| GAATAAACTTACCACACCCT+GGG | + | chr5.3:43005822-43005841 | MS.gene053917:intron | 40.0% | |
| GACCTGTGGATTCTATAGTA+AGG | + | chr5.3:43003117-43003136 | MS.gene053917:intron | 40.0% | |
| GACTGACAATGCTTCTTCTT+GGG | - | chr5.3:43003521-43003540 | None:intergenic | 40.0% | |
| GAGCAAAGAATTTCAGATGC+AGG | - | chr5.3:43007545-43007564 | None:intergenic | 40.0% | |
| GAGTCAAATCACTAGTGGTA+GGG | + | chr5.3:43003160-43003179 | MS.gene053917:intron | 40.0% | |
| GATGGGTAGAAACTAGACTT+AGG | + | chr5.3:43003072-43003091 | MS.gene053917:intron | 40.0% | |
| GCACTCTTTAGTGGAATTGT+AGG | + | chr5.3:43004161-43004180 | MS.gene053917:intron | 40.0% | |
| GCTTGAGAATTTCTGCATGA+AGG | + | chr5.3:43004009-43004028 | MS.gene053917:intron | 40.0% | |
| GGGAGTTTATTTGGACATGT+TGG | + | chr5.3:43005030-43005049 | MS.gene053917:CDS | 40.0% | |
| GTTTATTTGGACATGTTGGC+AGG | + | chr5.3:43005034-43005053 | MS.gene053917:CDS | 40.0% | |
| TAGCAACCATATTTAGGGGA+GGG | + | chr5.3:43002523-43002542 | MS.gene053917:intron | 40.0% | |
| TAGTAGGCCTACTTAGGTTA+GGG | + | chr5.3:43001580-43001599 | MS.gene053917:intron | 40.0% | |
| TAGTGATTAGTGGGAAGGTT+TGG | + | chr5.3:43007156-43007175 | MS.gene053917:intron | 40.0% | |
| TATTGCACTCCTAGATGCAT+AGG | - | chr5.3:43006431-43006450 | None:intergenic | 40.0% | |
| TCTTCAAGAATTGGAGAGCT+TGG | + | chr5.3:43005558-43005577 | MS.gene053917:intron | 40.0% | |
| TGACGTAGATGAATGATGCA+CGG | - | chr5.3:43004316-43004335 | None:intergenic | 40.0% | |
| TGCGTGGCTTCCATTTAAAA+TGG | + | chr5.3:43004370-43004389 | MS.gene053917:intron | 40.0% | |
| TGCTTATGCAGCAGTTAGTT+GGG | + | chr5.3:43002495-43002514 | MS.gene053917:intron | 40.0% | |
| TGTGTTTGTGCACTCTTTAG+TGG | + | chr5.3:43004152-43004171 | MS.gene053917:intron | 40.0% | |
| TTATCGGAAAGTGGTAAGAC+GGG | + | chr5.3:43002878-43002897 | MS.gene053917:intron | 40.0% | |
| TTGCTTATGCAGCAGTTAGT+TGG | + | chr5.3:43002494-43002513 | MS.gene053917:intron | 40.0% | |
| TTGTATAACGGCTTCTTCAG+CGG | - | chr5.3:43001442-43001461 | None:intergenic | 40.0% | |
| TTTCCTGCTACCTTAGAGTA+AGG | + | chr5.3:43001520-43001539 | MS.gene053917:intron | 40.0% | |
| ! | ACAAGCTCACAGTTTTCCAA+TGG | + | chr5.3:43005533-43005552 | MS.gene053917:intron | 40.0% |
| ! | CAAGCTCACAGTTTTCCAAT+GGG | + | chr5.3:43005534-43005553 | MS.gene053917:intron | 40.0% |
| ! | CCAATGGGTTCTTCAAGAAT+TGG | + | chr5.3:43005549-43005568 | MS.gene053917:intron | 40.0% |
| ! | CCGATTTCTCTCTTTGTTTG+AGG | + | chr5.3:43006148-43006167 | MS.gene053917:intron | 40.0% |
| ! | GAAAAATCACGGTTCTGATG+TGG | + | chr5.3:43006714-43006733 | MS.gene053917:CDS | 40.0% |
| ! | GAGGAGACATACAGAAGTTT+TGG | + | chr5.3:43006671-43006690 | MS.gene053917:CDS | 40.0% |
| ! | GCAACATGTTGATTACACAC+CGG | - | chr5.3:43001634-43001653 | None:intergenic | 40.0% |
| ! | GCGTGGCTTCCATTTAAAAT+GGG | + | chr5.3:43004371-43004390 | MS.gene053917:intron | 40.0% |
| ! | GGATCTAGAGATTAATGGGT+TGG | + | chr5.3:43003225-43003244 | MS.gene053917:intron | 40.0% |
| ! | GTTTTCCTGAAAACTCAACC+CGG | - | chr5.3:43006061-43006080 | None:intergenic | 40.0% |
| !! | GGCATAAATTTGTGCTGCTT+AGG | + | chr5.3:43004052-43004071 | MS.gene053917:intron | 40.0% |
| !! | TAATGGGTTGGAGAAAGACA+TGG | + | chr5.3:43003237-43003256 | MS.gene053917:intron | 40.0% |
| !! | TTTCTTTGGGATAATCGACC+AGG | + | chr5.3:43004853-43004872 | MS.gene053917:CDS | 40.0% |
| !!! | ACCTGACTTTTTTACAGTCC+AGG | + | chr5.3:43004958-43004977 | MS.gene053917:intron | 40.0% |
| !!! | ATTTTGAGTTGGGCAGAACT+TGG | + | chr5.3:43007960-43007979 | MS.gene053917:intron | 40.0% |
| !!! | TTTTGAGTTGGGCAGAACTT+GGG | + | chr5.3:43007961-43007980 | MS.gene053917:intron | 40.0% |
| AAGGGGCTGAGTAAGGAAAT+TGG | + | chr5.3:43002466-43002485 | MS.gene053917:intron | 45.0% | |
| AATCACTAGTGGTAGGGTAG+GGG | + | chr5.3:43003166-43003185 | MS.gene053917:intron | 45.0% | |
| ACAGGGATTGTAATTCGTGC+CGG | - | chr5.3:43003484-43003503 | None:intergenic | 45.0% | |
| ACATGTAGAGAGAAGACCTG+TGG | + | chr5.3:43003103-43003122 | MS.gene053917:intron | 45.0% | |
| ACATTAGGTCTCACATGCCA+AGG | - | chr5.3:43002143-43002162 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | + | chr5.3:43002971-43002990 | MS.gene053917:intron | 45.0% | |
| AGGCGTGTGTGATATGCTAT+CGG | - | chr5.3:43005795-43005814 | None:intergenic | 45.0% | |
| AGGGGCTGAGTAAGGAAATT+GGG | + | chr5.3:43002467-43002486 | MS.gene053917:intron | 45.0% | |
| AGTAGGCCTACTTAGGTTAG+GGG | + | chr5.3:43001581-43001600 | MS.gene053917:intron | 45.0% | |
| ATGAGGGTTTACGGAGGAAA+TGG | + | chr5.3:43005243-43005262 | MS.gene053917:intron | 45.0% | |
| CAAATCACTAGTGGTAGGGT+AGG | + | chr5.3:43003164-43003183 | MS.gene053917:intron | 45.0% | |
| CATATTTAGGGGAGGGAACA+TGG | + | chr5.3:43002530-43002549 | MS.gene053917:intron | 45.0% | |
| CATGTTCCCTCCCCTAAATA+TGG | - | chr5.3:43002532-43002551 | None:intergenic | 45.0% | |
| CCATCTAGCAAACTGTCTTC+TGG | - | chr5.3:43004256-43004275 | None:intergenic | 45.0% | |
| CCTACTACCAGCTAAACAAC+AGG | - | chr5.3:43001567-43001586 | None:intergenic | 45.0% | |
| CCTCAGTTATTACGAACCTC+CGG | + | chr5.3:43001612-43001631 | MS.gene053917:intron | 45.0% | |
| CCTTGAGGCAGCAAACAATT+TGG | + | chr5.3:43006747-43006766 | MS.gene053917:CDS | 45.0% | |
| CGAATAAACTTACCACACCC+TGG | + | chr5.3:43005821-43005840 | MS.gene053917:intron | 45.0% | |
| CGCAGGATTGTGGTAACATT+GGG | - | chr5.3:43005884-43005903 | None:intergenic | 45.0% | |
| CGCATCACATAAAACACCTG+AGG | - | chr5.3:43002828-43002847 | None:intergenic | 45.0% | |
| CGGAGGTTCGTAATAACTGA+GGG | - | chr5.3:43001614-43001633 | None:intergenic | 45.0% | |
| CGTGGGTCAATTGATGCTAT+TGG | + | chr5.3:43007432-43007451 | MS.gene053917:intron | 45.0% | |
| CTCAATAAAGGGGCTGAGTA+AGG | + | chr5.3:43002459-43002478 | MS.gene053917:intron | 45.0% | |
| GACGTAGATGAATGATGCAC+GGG | - | chr5.3:43004315-43004334 | None:intergenic | 45.0% | |
| GAGCGATTCGCAATACTTGA+AGG | - | chr5.3:43001716-43001735 | None:intergenic | 45.0% | |
| GAGGGAAATTCAAAGATCGC+AGG | - | chr5.3:43005901-43005920 | None:intergenic | 45.0% | |
| GAGTTGTACAGAGTACACCT+AGG | - | chr5.3:43003613-43003632 | None:intergenic | 45.0% | |
| GCATTAAAGAGAGAGGGTTG+GGG | + | chr5.3:43003026-43003045 | MS.gene053917:intron | 45.0% | |
| GGAGAATAGATCAGATGGAG+GGG | + | chr5.3:43003138-43003157 | MS.gene053917:intron | 45.0% | |
| GGAGTCAAATCACTAGTGGT+AGG | + | chr5.3:43003159-43003178 | MS.gene053917:intron | 45.0% | |
| GGGTAGAAACTAGACTTAGG+TGG | + | chr5.3:43003075-43003094 | MS.gene053917:intron | 45.0% | |
| GTAGTAGGCCTACTTAGGTT+AGG | + | chr5.3:43001579-43001598 | MS.gene053917:intron | 45.0% | |
| TAGAAGCTGAGAATTCTGCC+AGG | + | chr5.3:43006608-43006627 | MS.gene053917:CDS | 45.0% | |
| TCAAAACCGACGCAAGTTTC+CGG | - | chr5.3:43006005-43006024 | None:intergenic | 45.0% | |
| TCGCAGGATTGTGGTAACAT+TGG | - | chr5.3:43005885-43005904 | None:intergenic | 45.0% | |
| TCTGTGTAGAAAATGAGGGG+TGG | - | chr5.3:43001980-43001999 | None:intergenic | 45.0% | |
| TCTTTGAATTTCCCTCCGTG+CGG | + | chr5.3:43005905-43005924 | MS.gene053917:intron | 45.0% | |
| TGACAATGCTTCTTCTTGGG+TGG | - | chr5.3:43003518-43003537 | None:intergenic | 45.0% | |
| TGGAGAACTCAGTTGGAGTA+TGG | + | chr5.3:43004827-43004846 | MS.gene053917:CDS | 45.0% | |
| TGGTCCCCAGCAAATTATCT+TGG | + | chr5.3:43004629-43004648 | MS.gene053917:CDS | 45.0% | |
| TTCCACACTTATAGACCTCC+AGG | - | chr5.3:43001789-43001808 | None:intergenic | 45.0% | |
| TTCTTTCTCAGCTTCTAGCG+TGG | - | chr5.3:43006995-43007014 | None:intergenic | 45.0% | |
| TTTGTCTCGATCACCATGAG+TGG | - | chr5.3:43001382-43001401 | None:intergenic | 45.0% | |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr5.3:43003313-43003332 | None:intergenic | 45.0% |
| ! | ACAAATAGGCTGGTCCATTG+TGG | - | chr5.3:43001477-43001496 | None:intergenic | 45.0% |
| ! | ACATGTTGATTACACACCGG+AGG | - | chr5.3:43001631-43001650 | None:intergenic | 45.0% |
| ! | AGTGGAGCAATCCTGTGTTT+TGG | - | chr5.3:43004417-43004436 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr5.3:43003314-43003333 | None:intergenic | 45.0% |
| ! | CCAAATTGTTTGCTGCCTCA+AGG | - | chr5.3:43006750-43006769 | None:intergenic | 45.0% |
| ! | CCTGTTGTTTAGCTGGTAGT+AGG | + | chr5.3:43001564-43001583 | MS.gene053917:intron | 45.0% |
| ! | TACGGTACTAATCTGGAGCA+CGG | - | chr5.3:43007906-43007925 | None:intergenic | 45.0% |
| ! | TGGCATTTGCTGAACATTGC+TGG | + | chr5.3:43003812-43003831 | MS.gene053917:intron | 45.0% |
| ! | TTAGTGGGAAGGTTTGGAGT+TGG | + | chr5.3:43007162-43007181 | MS.gene053917:intron | 45.0% |
| !! | CCAGAAGACAGTTTGCTAGA+TGG | + | chr5.3:43004253-43004272 | MS.gene053917:CDS | 45.0% |
| !! | CTACCTTACTCTAAGGTAGC+AGG | - | chr5.3:43001526-43001545 | None:intergenic | 45.0% |
| !! | CTCAAACATGTTGGTTTGCG+TGG | + | chr5.3:43004354-43004373 | MS.gene053917:intron | 45.0% |
| !! | GTGTGTAGTGGTTCTAGGAT+AGG | - | chr5.3:43002005-43002024 | None:intergenic | 45.0% |
| AAAATGAGGGGTGGCATGGA+TGG | - | chr5.3:43001971-43001990 | None:intergenic | 50.0% | |
| AAATGAGGGGTGGCATGGAT+GGG | - | chr5.3:43001970-43001989 | None:intergenic | 50.0% | |
| AACAATAGCACAAGCGGCTG+TGG | + | chr5.3:43006534-43006553 | MS.gene053917:CDS | 50.0% | |
| AGCATCAACCAATGGACCCA+GGG | - | chr5.3:43005841-43005860 | None:intergenic | 50.0% | |
| AGCTGGTAGTAGGCCTACTT+AGG | + | chr5.3:43001574-43001593 | MS.gene053917:intron | 50.0% | |
| AGGTAGGGCGAAGATGGAAA+TGG | + | chr5.3:43008032-43008051 | MS.gene053917:CDS | 50.0% | |
| AGTCACTAACGTGAGTCCCT+GGG | - | chr5.3:43001892-43001911 | None:intergenic | 50.0% | |
| CAATGCCCCCTAACCTAAGT+AGG | - | chr5.3:43001590-43001609 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr5.3:43003312-43003331 | MS.gene053917:intron | 50.0% | |
| CCGGAGGTTCGTAATAACTG+AGG | - | chr5.3:43001615-43001634 | None:intergenic | 50.0% | |
| CGTGTGTGATATGCTATCGG+AGG | - | chr5.3:43005792-43005811 | None:intergenic | 50.0% | |
| CTCAGCTTCTAGCGTGGATT+TGG | - | chr5.3:43006989-43007008 | None:intergenic | 50.0% | |
| CTGCTGTTCTTGCTGAGGTA+GGG | + | chr5.3:43008017-43008036 | MS.gene053917:CDS | 50.0% | |
| GAAGGGCTACACGTATCCTA+TGG | + | chr5.3:43004027-43004046 | MS.gene053917:intron | 50.0% | |
| GAGCCAGACAAGGATACAAG+TGG | - | chr5.3:43004435-43004454 | None:intergenic | 50.0% | |
| GAGGGGAGTCAAATCACTAG+TGG | + | chr5.3:43003155-43003174 | MS.gene053917:intron | 50.0% | |
| GCATTTCCGGAAACTTGCGT+CGG | + | chr5.3:43005996-43006015 | MS.gene053917:intron | 50.0% | |
| GCTAAAGTCTTGGCAGAAGC+CGG | + | chr5.3:43004604-43004623 | MS.gene053917:intron | 50.0% | |
| GCTCCACTTGTATCCTTGTC+TGG | + | chr5.3:43004429-43004448 | MS.gene053917:CDS | 50.0% | |
| GCTGATCCAGCATCAACCAA+TGG | - | chr5.3:43005849-43005868 | None:intergenic | 50.0% | |
| GCTGGATCAGCTCCTCATTT+GGG | + | chr5.3:43005858-43005877 | MS.gene053917:intron | 50.0% | |
| GGCTACACGTATCCTATGGT+AGG | + | chr5.3:43004031-43004050 | MS.gene053917:intron | 50.0% | |
| GGGTGGAATCAGCTGAAACA+GGG | - | chr5.3:43003501-43003520 | None:intergenic | 50.0% | |
| GGTAACATTGGGCCCAAATG+AGG | - | chr5.3:43005873-43005892 | None:intergenic | 50.0% | |
| GGTAGGGCGAAGATGGAAAT+GGG | + | chr5.3:43008033-43008052 | MS.gene053917:CDS | 50.0% | |
| GTAGAAAATGAGGGGTGGCA+TGG | - | chr5.3:43001975-43001994 | None:intergenic | 50.0% | |
| GTAGGCCTACTTAGGTTAGG+GGG | + | chr5.3:43001582-43001601 | MS.gene053917:intron | 50.0% | |
| GTGTGATATGCTATCGGAGG+TGG | - | chr5.3:43005789-43005808 | None:intergenic | 50.0% | |
| TATAACGGCTTCTTCAGCGG+TGG | - | chr5.3:43001439-43001458 | None:intergenic | 50.0% | |
| TCAGCTCGCATCTGCATTTC+CGG | + | chr5.3:43005983-43006002 | MS.gene053917:intron | 50.0% | |
| TGATCGAGACAAAGCTGTGG+TGG | + | chr5.3:43001389-43001408 | MS.gene053917:CDS | 50.0% | |
| TGCCTGGAGGTCTATAAGTG+TGG | + | chr5.3:43001784-43001803 | MS.gene053917:intron | 50.0% | |
| TGCTCGTGTGTAGTGGTTCT+AGG | - | chr5.3:43002010-43002029 | None:intergenic | 50.0% | |
| TGCTGGATCAGCTCCTCATT+TGG | + | chr5.3:43005857-43005876 | MS.gene053917:intron | 50.0% | |
| TGCTGTACGGGACAAAGTGT+TGG | + | chr5.3:43002904-43002923 | MS.gene053917:intron | 50.0% | |
| TGGGTGGAATCAGCTGAAAC+AGG | - | chr5.3:43003502-43003521 | None:intergenic | 50.0% | |
| TGGTGATCGAGACAAAGCTG+TGG | + | chr5.3:43001386-43001405 | MS.gene053917:CDS | 50.0% | |
| TGTGGAGAGGCTTTACCTTG+AGG | + | chr5.3:43006732-43006751 | MS.gene053917:CDS | 50.0% | |
| TTAGGGGAGGGAACATGGAA+GGG | + | chr5.3:43002535-43002554 | MS.gene053917:intron | 50.0% | |
| TTGGACATGTTGGCAGGAGA+TGG | + | chr5.3:43005040-43005059 | MS.gene053917:CDS | 50.0% | |
| TTTAGGGGAGGGAACATGGA+AGG | + | chr5.3:43002534-43002553 | MS.gene053917:intron | 50.0% | |
| ! | ATCACGGTTCTGATGTGGAG+AGG | + | chr5.3:43006719-43006738 | MS.gene053917:CDS | 50.0% |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr5.3:43003315-43003334 | None:intergenic | 50.0% |
| ! | CTTTTCCCACTAAGTGGGGT+CGG | - | chr5.3:43003309-43003328 | None:intergenic | 50.0% |
| ! | GCCGCTTGTGCTATTGTTGA+AGG | - | chr5.3:43006532-43006551 | None:intergenic | 50.0% |
| ! | GCTGTACGGGACAAAGTGTT+GGG | + | chr5.3:43002905-43002924 | MS.gene053917:intron | 50.0% |
| ! | GTTTTCTAACTGGGCCAAGC+AGG | + | chr5.3:43006124-43006143 | MS.gene053917:intron | 50.0% |
| !! | ATGGTGTCACTGAGCTACGT+GGG | + | chr5.3:43007415-43007434 | MS.gene053917:intron | 50.0% |
| !! | GGAATCCGGGTTGAGTTTTC+AGG | + | chr5.3:43006053-43006072 | MS.gene053917:intron | 50.0% |
| !! | TAATTTGCTGGGGACCACAC+CGG | - | chr5.3:43004626-43004645 | None:intergenic | 50.0% |
| !! | TTCAAATGGAGGAGTGCCTC+AGG | + | chr5.3:43002809-43002828 | MS.gene053917:intron | 50.0% |
| !! | TTGAATCTGGTAATGGGGGC+TGG | - | chr5.3:43002034-43002053 | None:intergenic | 50.0% |
| AATGAGGGGTGGCATGGATG+GGG | - | chr5.3:43001969-43001988 | None:intergenic | 55.0% | |
| AGAGAGAAATCGGGCCTGCT+TGG | - | chr5.3:43006141-43006160 | None:intergenic | 55.0% | |
| AGATCTGAGCTGCTTAGCCG+AGG | + | chr5.3:43006652-43006671 | MS.gene053917:CDS | 55.0% | |
| ATCCCATGTGCATCACCGCA+CGG | - | chr5.3:43005923-43005942 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.3:43003300-43003319 | MS.gene053917:intron | 55.0% | |
| CACATGGGATCGACAGTTGC+AGG | + | chr5.3:43005933-43005952 | MS.gene053917:intron | 55.0% | |
| CAGAACTTGGGTGGAGGATG+AGG | + | chr5.3:43007973-43007992 | MS.gene053917:intron | 55.0% | |
| CAGCATCAACCAATGGACCC+AGG | - | chr5.3:43005842-43005861 | None:intergenic | 55.0% | |
| CCTCAGCAAGAACAGCAGCA+CGG | - | chr5.3:43008015-43008034 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGAAA+AGG | + | chr5.3:43003307-43003326 | MS.gene053917:intron | 55.0% | |
| CTCAGCAAGAACAGCAGCAC+GGG | - | chr5.3:43008014-43008033 | None:intergenic | 55.0% | |
| CTCTTCTGTCTCAGCTTGCC+TGG | - | chr5.3:43006629-43006648 | None:intergenic | 55.0% | |
| CTGTCTATGCACTCTCTGCC+TGG | + | chr5.3:43001768-43001787 | MS.gene053917:intron | 55.0% | |
| GAGGGAACATGGAAGGGGAA+TGG | + | chr5.3:43002541-43002560 | MS.gene053917:intron | 55.0% | |
| GAGTCACTAACGTGAGTCCC+TGG | - | chr5.3:43001893-43001912 | None:intergenic | 55.0% | |
| GAGTGGTTAATGGGAGGGAG+AGG | - | chr5.3:43005584-43005603 | None:intergenic | 55.0% | |
| GCTGCTGTTCTTGCTGAGGT+AGG | + | chr5.3:43008016-43008035 | MS.gene053917:CDS | 55.0% | |
| GGGATAATCGACCAGGTACG+TGG | + | chr5.3:43004860-43004879 | MS.gene053917:intron | 55.0% | |
| GTAAGACGGGCGATGCTGTA+CGG | + | chr5.3:43002891-43002910 | MS.gene053917:intron | 55.0% | |
| GTCTCGATCACCATGAGTGG+TGG | - | chr5.3:43001379-43001398 | None:intergenic | 55.0% | |
| TAAGACGGGCGATGCTGTAC+GGG | + | chr5.3:43002892-43002911 | MS.gene053917:intron | 55.0% | |
| TAGGGGAGGGAACATGGAAG+GGG | + | chr5.3:43002536-43002555 | MS.gene053917:intron | 55.0% | |
| TCGAGACAAAGCTGTGGTGG+TGG | + | chr5.3:43001392-43001411 | MS.gene053917:CDS | 55.0% | |
| TCTATGCACTCTCTGCCTGG+AGG | + | chr5.3:43001771-43001790 | MS.gene053917:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.3:43003301-43003320 | MS.gene053917:intron | 55.0% | |
| TTACCACACCCTGGGTCCAT+TGG | + | chr5.3:43005830-43005849 | MS.gene053917:intron | 55.0% | |
| TTGCTGAGGTAGGGCGAAGA+TGG | + | chr5.3:43008026-43008045 | MS.gene053917:CDS | 55.0% | |
| TTTCACTCCGACCACCACAC+CGG | + | chr5.3:43001942-43001961 | MS.gene053917:intron | 55.0% | |
| ! | CTGGGTCCATTGGTTGATGC+TGG | + | chr5.3:43005840-43005859 | MS.gene053917:intron | 55.0% |
| ! | GTGTGCATTAGCTCTCTGCG+AGG | - | chr5.3:43005291-43005310 | None:intergenic | 55.0% |
| ! | TGAGTTGGGCAGAACTTGGG+TGG | + | chr5.3:43007964-43007983 | MS.gene053917:intron | 55.0% |
| !! | AGACAAAGCTGTGGTGGTGG+AGG | + | chr5.3:43001395-43001414 | MS.gene053917:CDS | 55.0% |
| !! | CATGGTGTCACTGAGCTACG+TGG | + | chr5.3:43007414-43007433 | MS.gene053917:intron | 55.0% |
| AGTCTTGGCAGAAGCCGGTG+TGG | + | chr5.3:43004609-43004628 | MS.gene053917:intron | 60.0% | |
| CAACCAATGGACCCAGGGTG+TGG | - | chr5.3:43005836-43005855 | None:intergenic | 60.0% | |
| CAAGAACAGCAGCACGGGCT+TGG | - | chr5.3:43008009-43008028 | None:intergenic | 60.0% | |
| CATGTGCATCACCGCACGGA+GGG | - | chr5.3:43005919-43005938 | None:intergenic | 60.0% | |
| CTCCGTGCGGTGATGCACAT+GGG | + | chr5.3:43005918-43005937 | MS.gene053917:intron | 60.0% | |
| GCGAATCGCTCGTGTCTGTC+TGG | + | chr5.3:43001725-43001744 | MS.gene053917:intron | 60.0% | |
| GGCTGGATGCTCGTGTGTAG+TGG | - | chr5.3:43002017-43002036 | None:intergenic | 60.0% | |
| GTTGGGCAGAACTTGGGTGG+AGG | + | chr5.3:43007967-43007986 | MS.gene053917:intron | 60.0% | |
| TTCACTCCGACCACCACACC+GGG | + | chr5.3:43001943-43001962 | MS.gene053917:intron | 60.0% | |
| ! | AGGAGCTTGCTCTGTGGCTG+GGG | - | chr5.3:43005271-43005290 | None:intergenic | 60.0% |
| ! | CCGTGCTGCTGTTCTTGCTG+AGG | + | chr5.3:43008012-43008031 | MS.gene053917:CDS | 60.0% |
| ! | GAGGAGCTTGCTCTGTGGCT+GGG | - | chr5.3:43005272-43005291 | None:intergenic | 60.0% |
| ! | TCTGCGAGGAGCTTGCTCTG+TGG | - | chr5.3:43005277-43005296 | None:intergenic | 60.0% |
| !! | CAAAGCTGTGGTGGTGGAGG+AGG | + | chr5.3:43001398-43001417 | MS.gene053917:CDS | 60.0% |
| !! | CTGTGGCTCTGACAAGTGGC+AGG | + | chr5.3:43006551-43006570 | MS.gene053917:CDS | 60.0% |
| CCATGTGCATCACCGCACGG+AGG | - | chr5.3:43005920-43005939 | None:intergenic | 65.0% | |
| CCTCCGTGCGGTGATGCACA+TGG | + | chr5.3:43005917-43005936 | MS.gene053917:intron | 65.0% | |
| CGGAGGTGGCTGTGAGAGAC+AGG | - | chr5.3:43005775-43005794 | None:intergenic | 65.0% | |
| ! | CGAGGAGCTTGCTCTGTGGC+TGG | - | chr5.3:43005273-43005292 | None:intergenic | 65.0% |
| !! | AGCTGTGGTGGTGGAGGAGG+AGG | + | chr5.3:43001401-43001420 | MS.gene053917:CDS | 65.0% |
| !! | GCGGCTGTGGCTCTGACAAG+TGG | + | chr5.3:43006547-43006566 | MS.gene053917:CDS | 65.0% |
| ATGGATGGGGCCCGGTGTGG+TGG | - | chr5.3:43001956-43001975 | None:intergenic | 70.0% | |
| ATGGGGCCCGGTGTGGTGGT+CGG | - | chr5.3:43001952-43001971 | None:intergenic | 70.0% | |
| GGCATGGATGGGGCCCGGTG+TGG | - | chr5.3:43001959-43001978 | None:intergenic | 75.0% | |
| GGGGTGGCATGGATGGGGCC+CGG | - | chr5.3:43001964-43001983 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 43001360 | 43008069 | 43001360 | ID=MS.gene053917 |
| chr5.3 | mRNA | 43001360 | 43008069 | 43001360 | ID=MS.gene053917.t1;Parent=MS.gene053917 |
| chr5.3 | exon | 43001360 | 43001465 | 43001360 | ID=MS.gene053917.t1.exon1;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43001360 | 43001465 | 43001360 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43003467 | 43003555 | 43003467 | ID=MS.gene053917.t1.exon2;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43003467 | 43003555 | 43003467 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43004216 | 43004304 | 43004216 | ID=MS.gene053917.t1.exon3;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43004216 | 43004304 | 43004216 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43004410 | 43004513 | 43004410 | ID=MS.gene053917.t1.exon4;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43004410 | 43004513 | 43004410 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43004611 | 43004713 | 43004611 | ID=MS.gene053917.t1.exon5;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43004611 | 43004713 | 43004611 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43004799 | 43004874 | 43004799 | ID=MS.gene053917.t1.exon6;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43004799 | 43004874 | 43004799 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43004980 | 43005085 | 43004980 | ID=MS.gene053917.t1.exon7;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43004980 | 43005085 | 43004980 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43006500 | 43007031 | 43006500 | ID=MS.gene053917.t1.exon8;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43006500 | 43007031 | 43006500 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| chr5.3 | exon | 43007976 | 43008069 | 43007976 | ID=MS.gene053917.t1.exon9;Parent=MS.gene053917.t1 |
| chr5.3 | CDS | 43007976 | 43008069 | 43007976 | ID=cds.MS.gene053917.t1;Parent=MS.gene053917.t1 |
| Gene Sequence |
| Protein sequence |
