AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78843

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78843.t1 MTR_3g008160 82.675 329 6 1 1 278 1 329 0.0 513
MS.gene78843.t1 MTR_3g008160 80.357 280 4 1 50 278 1 280 8.30e-147 420
MS.gene78843.t1 MTR_3g008170 64.127 315 61 1 16 278 16 330 1.36e-136 396
MS.gene78843.t1 MTR_5g082540 51.553 322 101 4 9 278 9 327 3.55e-102 308
MS.gene78843.t1 MTR_1g038630 50.629 318 102 4 13 278 13 327 6.46e-99 300
MS.gene78843.t1 MTR_5g094760 47.937 315 110 4 15 278 19 330 2.30e-94 288
MS.gene78843.t1 MTR_7g091690 49.524 315 105 4 15 278 19 330 2.75e-93 285
MS.gene78843.t1 MTR_4g091370 51.266 316 104 2 13 278 13 328 2.58e-92 283
MS.gene78843.t1 MTR_0204s0020 47.771 314 112 3 15 278 13 324 1.78e-90 278
MS.gene78843.t1 MTR_5g006070 47.785 316 112 3 15 278 14 328 2.08e-90 278
MS.gene78843.t1 MTR_5g041550 48.000 325 114 4 8 278 6 329 4.86e-89 275
MS.gene78843.t1 MTR_4g116790 43.865 326 129 4 8 281 10 333 1.48e-88 269
MS.gene78843.t1 MTR_0009s0370 47.484 318 114 3 15 280 13 329 9.39e-88 271
MS.gene78843.t1 MTR_0204s0040 45.223 314 120 3 15 278 21 332 4.27e-87 269
MS.gene78843.t1 MTR_3g074380 43.631 314 122 3 17 278 20 330 6.38e-87 265
MS.gene78843.t1 MTR_0204s0020 46.815 314 112 4 15 278 13 321 1.67e-86 267
MS.gene78843.t1 MTR_4g090600 47.720 329 120 2 1 278 1 328 1.79e-86 268
MS.gene78843.t1 MTR_4g116790 43.963 323 127 4 8 278 10 330 1.97e-86 268
MS.gene78843.t1 MTR_3g074390 43.202 331 131 4 1 278 6 332 2.32e-86 268
MS.gene78843.t1 MTR_3g093010 45.768 319 122 2 11 278 10 328 7.33e-86 266
MS.gene78843.t1 MTR_1g104770 44.444 315 124 3 15 278 15 329 4.60e-85 264
MS.gene78843.t1 MTR_4g116770 45.223 314 120 3 15 278 217 528 4.87e-85 269
MS.gene78843.t1 MTR_3g074410 44.728 313 118 3 18 278 20 329 8.66e-85 263
MS.gene78843.t1 MTR_6g087040 44.688 320 123 3 15 282 18 335 1.79e-84 263
MS.gene78843.t1 MTR_6g088375 44.688 320 123 3 15 282 18 335 1.79e-84 263
MS.gene78843.t1 MTR_1g038600 47.003 317 97 5 13 278 13 309 7.09e-84 261
MS.gene78843.t1 MTR_1g104780 47.040 321 115 4 11 278 10 328 1.11e-82 258
MS.gene78843.t1 MTR_3g074270 43.949 314 122 3 16 278 16 326 1.18e-82 257
MS.gene78843.t1 MTR_1g104750 44.762 315 122 2 15 278 15 328 2.19e-82 257
MS.gene78843.t1 MTR_3g023480 44.654 318 123 3 15 280 13 329 3.19e-80 252
MS.gene78843.t1 MTR_8g102860 43.750 320 127 3 15 282 18 336 3.16e-78 247
MS.gene78843.t1 MTR_5g006070 45.196 281 101 3 50 278 1 280 8.38e-70 224
MS.gene78843.t1 MTR_3g007910 41.100 309 119 4 13 271 12 307 1.58e-67 218
MS.gene78843.t1 MTR_3g093060 43.060 281 108 2 50 278 1 281 4.23e-67 216
MS.gene78843.t1 MTR_8g102860 42.456 285 111 3 50 282 1 284 2.12e-63 207
MS.gene78843.t1 MTR_3g074400 36.996 273 122 6 50 277 1 268 2.76e-49 169
MS.gene78843.t1 MTR_3g074330 55.782 147 57 2 13 152 13 158 1.62e-48 160
MS.gene78843.t1 MTR_3g074360 55.782 147 57 2 13 152 13 158 1.62e-48 160
MS.gene78843.t1 MTR_5g096000 51.685 178 67 1 13 190 12 170 2.62e-48 163
MS.gene78843.t1 MTR_3g074310 55.102 147 58 2 13 152 13 158 9.47e-48 158
MS.gene78843.t1 MTR_0064s0040 48.299 147 64 1 6 152 7 141 2.03e-39 135
MS.gene78843.t1 MTR_6g088450 27.982 218 137 3 28 245 63 260 3.29e-24 102
MS.gene78843.t1 MTR_8g103500 26.160 237 153 4 10 244 3 219 7.48e-24 101
MS.gene78843.t1 MTR_2g048720 31.304 230 138 4 21 250 24 233 2.62e-22 97.1
MS.gene78843.t1 MTR_7g005910 30.415 217 131 5 21 236 31 228 5.40e-21 93.2
MS.gene78843.t1 MTR_2g049020 32.174 230 128 8 21 246 24 229 1.07e-20 92.4
MS.gene78843.t1 MTR_5g075300 28.899 218 134 4 28 244 24 221 1.47e-20 91.7
MS.gene78843.t1 MTR_4g069500 25.954 262 157 5 3 247 6 247 1.65e-20 91.7
MS.gene78843.t1 MTR_4g072030 27.004 237 140 5 27 250 31 247 2.60e-20 91.3
MS.gene78843.t1 MTR_2g026160 29.075 227 141 4 20 246 24 230 2.93e-20 91.3
MS.gene78843.t1 MTR_7g082270 28.629 248 151 8 6 253 53 274 4.11e-20 90.5
MS.gene78843.t1 MTR_3g116240 26.496 234 139 4 27 247 32 245 4.61e-20 90.5
MS.gene78843.t1 MTR_7g082270 28.629 248 151 8 6 253 53 274 5.11e-20 90.1
MS.gene78843.t1 MTR_1g116660 28.111 217 136 4 21 236 33 230 5.65e-20 90.1
MS.gene78843.t1 MTR_8g077890 27.982 218 136 4 28 244 24 221 2.61e-19 88.2
MS.gene78843.t1 MTR_1g116650 27.189 217 139 3 21 237 76 273 7.44e-19 87.0
MS.gene78843.t1 MTR_6g018790 29.362 235 141 5 6 240 93 302 8.73e-19 86.7
MS.gene78843.t1 MTR_3g084110 27.189 217 138 4 21 236 26 223 2.43e-18 85.5
MS.gene78843.t1 MTR_4g069500 29.412 170 107 1 91 247 28 197 4.90e-18 84.3
MS.gene78843.t1 MTR_4g064820 29.958 237 137 6 23 248 96 314 1.14e-17 83.2
MS.gene78843.t1 MTR_5g077580 27.941 272 128 7 21 246 24 273 3.10e-17 82.0
MS.gene78843.t1 MTR_4g077740 27.803 223 138 4 24 240 46 251 3.46e-17 82.0
MS.gene78843.t1 MTR_5g024740 26.609 233 148 6 23 253 4 215 1.48e-16 80.5
MS.gene78843.t1 MTR_2g013310 26.667 225 141 6 24 246 53 255 6.51e-16 78.2
MS.gene78843.t1 MTR_3g116060 29.557 203 136 4 74 271 31 231 1.06e-15 77.8
MS.gene78843.t1 MTR_3g118530 28.571 182 127 3 91 271 54 233 1.26e-15 77.4
MS.gene78843.t1 MTR_3g118530 28.571 182 127 3 91 271 54 233 1.57e-15 77.0
MS.gene78843.t1 MTR_2g013310 29.560 159 109 2 89 246 26 182 6.85e-15 75.1
MS.gene78843.t1 MTR_5g044910 26.061 165 119 3 90 253 53 215 1.36e-14 74.3
MS.gene78843.t1 MTR_7g446340 22.422 223 153 3 23 245 55 257 1.82e-14 73.9
MS.gene78843.t1 MTR_6g007340 22.422 223 153 3 23 245 55 257 1.82e-14 73.9
MS.gene78843.t1 MTR_5g019870 28.492 179 122 2 65 243 43 215 5.57e-14 72.4
MS.gene78843.t1 MTR_8g073100 26.257 179 129 3 76 253 39 215 3.34e-13 70.1
MS.gene78843.t1 MTR_5g020270 25.439 228 142 4 23 250 50 249 2.69e-12 67.4
MS.gene78843.t1 MTR_5g020270 25.439 228 142 4 23 250 50 249 2.89e-12 67.0
MS.gene78843.t1 MTR_2g026140 26.027 219 131 5 29 247 30 217 3.97e-12 67.0
MS.gene78843.t1 MTR_8g077310 24.561 228 144 3 23 250 47 246 6.36e-12 66.2
MS.gene78843.t1 MTR_8g077310 25.000 228 143 4 23 250 47 246 6.49e-12 65.9
MS.gene78843.t1 MTR_1g093115 53.333 60 27 1 161 219 1 60 1.87e-11 58.9
MS.gene78843.t1 MTR_8g077300 25.764 229 142 4 23 251 39 239 2.21e-11 64.3
MS.gene78843.t1 MTR_6g087910 25.658 152 110 3 103 254 112 260 3.35e-11 63.9
MS.gene78843.t1 MTR_5g020270 30.070 143 92 2 108 250 15 149 7.38e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78843.t1 AT5G61520 52.830 318 92 3 17 278 18 333 1.36e-107 322
MS.gene78843.t1 AT3G19930 50.473 317 104 3 13 278 13 327 6.63e-99 300
MS.gene78843.t1 AT3G19930 50.473 317 104 3 13 278 13 327 6.63e-99 300
MS.gene78843.t1 AT5G23270 49.689 322 109 3 9 278 10 330 5.11e-98 298
MS.gene78843.t1 AT1G11260 49.068 322 112 2 8 278 8 328 8.82e-98 297
MS.gene78843.t1 AT3G19940 49.518 311 104 3 19 278 21 329 7.00e-95 290
MS.gene78843.t1 AT5G26340 49.221 321 112 3 9 278 9 329 1.14e-94 290
MS.gene78843.t1 AT1G50310 48.397 312 107 3 19 278 21 330 1.15e-92 284
MS.gene78843.t1 AT4G21480 48.171 328 118 3 1 278 1 326 6.10e-92 282
MS.gene78843.t1 AT4G02050 48.742 318 111 5 15 282 19 334 2.17e-91 281
MS.gene78843.t1 AT4G02050 48.742 318 111 5 15 282 19 334 2.17e-91 281
MS.gene78843.t1 AT5G61520 51.399 286 81 3 49 278 2 285 3.72e-91 279
MS.gene78843.t1 AT1G77210 44.375 320 124 3 15 282 18 335 9.36e-85 263
MS.gene78843.t1 AT1G77210 44.375 320 124 3 15 282 18 335 9.36e-85 263
MS.gene78843.t1 AT5G26250 45.455 330 123 6 1 278 1 325 1.66e-83 260
MS.gene78843.t1 AT1G07340 44.817 328 125 4 1 276 1 324 2.14e-82 257
MS.gene78843.t1 AT1G34580 53.629 248 110 4 6 253 8 250 2.67e-82 257
MS.gene78843.t1 AT3G05960 42.500 320 130 4 10 278 8 324 8.78e-76 240
MS.gene78843.t1 AT1G34580 52.941 204 92 3 50 253 1 200 8.24e-65 210
MS.gene78843.t1 AT1G50310 39.665 179 54 3 152 278 11 187 1.87e-32 123
MS.gene78843.t1 AT1G77210 38.251 183 59 3 152 282 6 186 3.65e-28 111
MS.gene78843.t1 AT4G36670 30.802 237 130 6 25 247 18 234 1.15e-23 100
MS.gene78843.t1 AT2G18480 28.986 207 127 3 37 243 36 222 4.78e-22 96.3
MS.gene78843.t1 AT2G16120 28.767 219 136 3 27 245 30 228 3.44e-20 90.9
MS.gene78843.t1 AT5G16150 28.085 235 144 6 6 240 93 302 7.81e-20 89.7
MS.gene78843.t1 AT5G16150 28.085 235 144 6 6 240 93 302 7.81e-20 89.7
MS.gene78843.t1 AT5G16150 28.085 235 144 6 6 240 93 302 7.81e-20 89.7
MS.gene78843.t1 AT2G16130 28.311 219 137 3 27 245 30 228 2.01e-19 88.6
MS.gene78843.t1 AT3G18830 26.923 234 138 4 27 247 40 253 3.71e-19 87.8
MS.gene78843.t1 AT2G35740 28.700 223 138 5 21 242 24 226 6.27e-19 87.4
MS.gene78843.t1 AT1G30220 29.825 228 136 7 21 246 26 231 7.35e-19 87.0
MS.gene78843.t1 AT4G16480 28.194 227 143 4 20 246 24 230 1.73e-18 85.9
MS.gene78843.t1 AT4G16480 28.194 227 143 4 20 246 24 230 1.73e-18 85.9
MS.gene78843.t1 AT4G16480 28.194 227 143 4 20 246 24 230 1.73e-18 85.9
MS.gene78843.t1 AT5G59250 29.114 237 139 5 23 248 98 316 7.28e-18 84.0
MS.gene78843.t1 AT3G51490 25.098 255 170 7 23 276 4 238 1.78e-17 83.2
MS.gene78843.t1 AT3G51490 25.098 255 170 7 23 276 4 238 1.95e-17 83.2
MS.gene78843.t1 AT3G51490 27.273 187 133 3 91 276 4 188 1.71e-16 80.1
MS.gene78843.t1 AT3G05155 25.641 234 144 7 16 248 20 224 6.59e-15 74.3
MS.gene78843.t1 AT3G05155 25.641 234 144 7 16 248 20 224 1.13e-14 74.3
MS.gene78843.t1 AT2G20780 21.702 235 164 3 11 245 43 257 2.04e-14 73.9
MS.gene78843.t1 AT3G05400 25.751 233 145 7 16 248 19 223 6.16e-14 72.4
MS.gene78843.t1 AT1G67300 27.857 140 99 2 95 234 105 242 1.45e-13 71.2
MS.gene78843.t1 AT1G67300 27.857 140 99 2 95 234 105 242 1.45e-13 71.2
MS.gene78843.t1 AT1G67300 27.857 140 99 2 95 234 105 242 1.49e-13 71.2
MS.gene78843.t1 AT1G67300 27.857 140 99 2 95 234 105 242 1.60e-13 70.9
MS.gene78843.t1 AT1G67300 27.857 140 99 2 95 234 105 242 1.60e-13 70.9
MS.gene78843.t1 AT1G67300 27.857 140 99 2 95 234 105 242 1.62e-13 70.9
MS.gene78843.t1 AT1G67300 27.857 140 99 2 95 234 105 242 1.62e-13 70.9
MS.gene78843.t1 AT5G17010 27.660 235 143 8 24 248 48 265 2.07e-13 70.9
MS.gene78843.t1 AT5G17010 27.660 235 143 8 24 248 48 265 2.07e-13 70.9
MS.gene78843.t1 AT5G17010 27.660 235 143 8 24 248 48 265 2.07e-13 70.9
MS.gene78843.t1 AT3G05165 26.271 236 140 7 16 248 23 227 2.26e-13 70.5
MS.gene78843.t1 AT3G05165 26.271 236 140 7 16 248 23 227 2.71e-13 70.5
MS.gene78843.t1 AT3G05165 26.271 236 140 7 16 248 23 227 2.71e-13 70.5
MS.gene78843.t1 AT3G05165 26.271 236 140 7 16 248 23 227 2.71e-13 70.5
MS.gene78843.t1 AT1G08900 25.882 170 110 4 85 250 25 182 2.77e-13 70.1
MS.gene78843.t1 AT1G08900 25.882 170 110 4 85 250 67 224 3.51e-13 70.1
MS.gene78843.t1 AT1G08900 25.882 170 110 4 85 250 67 224 3.51e-13 70.1
MS.gene78843.t1 AT3G05165 26.271 236 140 7 16 248 23 227 3.57e-13 70.1
MS.gene78843.t1 AT3G05165 26.271 236 140 7 16 248 23 227 3.57e-13 70.1
MS.gene78843.t1 AT1G08900 25.882 170 110 4 85 250 67 224 3.78e-13 69.7
MS.gene78843.t1 AT1G08900 25.882 170 110 4 85 250 59 216 3.86e-13 69.7
MS.gene78843.t1 AT1G05030 26.577 222 138 6 29 248 85 283 4.20e-13 69.7
MS.gene78843.t1 AT1G20840 27.647 170 120 3 103 271 64 231 1.55e-12 68.2
MS.gene78843.t1 AT1G20840 27.647 170 120 3 103 271 64 231 1.55e-12 68.2
MS.gene78843.t1 AT1G05030 27.485 171 120 3 79 248 64 231 1.68e-12 67.8
MS.gene78843.t1 AT2G20780 23.889 180 131 2 66 245 26 199 1.74e-12 67.8
MS.gene78843.t1 AT2G43330 25.114 219 145 3 27 245 35 234 2.84e-12 67.4
MS.gene78843.t1 AT5G17010 24.453 274 158 9 7 248 10 266 2.88e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.21e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.21e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.21e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.21e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.21e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.21e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.21e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.81e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.81e-12 67.0
MS.gene78843.t1 AT4G35300 27.473 182 129 3 91 271 54 233 4.81e-12 67.0
MS.gene78843.t1 AT3G05400 24.464 233 128 8 16 248 19 203 2.23e-11 64.3
MS.gene78843.t1 AT1G08930 25.391 256 154 7 18 268 53 276 4.88e-11 63.5
MS.gene78843.t1 AT1G08930 25.391 256 154 7 18 268 53 276 4.88e-11 63.5
MS.gene78843.t1 AT1G75220 25.214 234 146 6 18 250 42 247 7.34e-11 63.2
MS.gene78843.t1 AT1G19450 26.540 211 127 5 18 227 43 226 8.82e-11 62.8

Find 62 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATGCTGTTTGGTGTTTC+TGG 0.080373 3.1:-3752491 None:intergenic
AACATCATGTGTACCTCTTA+TGG 0.246160 3.1:-3752558 None:intergenic
GCCATTTCTGATAGATATAA+TGG 0.247787 3.1:-3752287 None:intergenic
ATACTTGGTCGTGTTCTTCT+TGG 0.258509 3.1:+3751449 MS.gene78843:CDS
AAATAGGATTGGAGCATAAA+AGG 0.275402 3.1:-3752735 None:intergenic
GGTTATGATATAGGAATTTC+AGG 0.277570 3.1:+3750278 MS.gene78843:CDS
TGGAATTGGCTTTGCTAATC+AGG 0.280534 3.1:+3751475 MS.gene78843:CDS
GGTGGTGCTGCATTCCTTAT+TGG 0.287192 3.1:+3751386 MS.gene78843:CDS
ATTATATTCGGTTATGATAT+AGG 0.301696 3.1:+3750269 MS.gene78843:CDS
CTTGTTGTCTTGTTTCATCT+TGG 0.317999 3.1:-3751228 None:intergenic
GTTCTTCTTGGAGTTGGAAT+TGG 0.324453 3.1:+3751461 MS.gene78843:CDS
CCAGCTTTAATCCTCACTTT+AGG 0.346251 3.1:+3752455 MS.gene78843:CDS
TATTGTGATTCTCTCTTGTA+TGG 0.347026 3.1:+3750229 MS.gene78843:CDS
TCTTGTATGGTGGCTGCCAC+TGG 0.347170 3.1:+3750242 MS.gene78843:CDS
AAGCAAAGAAAGATGCTAAA+AGG 0.350210 3.1:-3751319 None:intergenic
TTGATTGCTCCTCTATATCT+TGG 0.356231 3.1:-3752314 None:intergenic
CCTCTTCCATTGCTTGCAAT+TGG 0.356504 3.1:-3750185 None:intergenic
TTCATCTTGGTGTATACATC+TGG 0.359272 3.1:-3751215 None:intergenic
CACCAAGAGCTGCTCCAATA+AGG 0.370888 3.1:-3751400 None:intergenic
GCCACTGGAGGCATTATATT+CGG 0.377170 3.1:+3750257 MS.gene78843:CDS
TTCCTTATTGGAGCAGCTCT+TGG 0.384601 3.1:+3751398 MS.gene78843:CDS
TTATGCTGTTTGGTGTTTCT+GGG 0.396973 3.1:-3752490 None:intergenic
GCACCACCTACAAGAATTGA+TGG 0.406112 3.1:-3751371 None:intergenic
TCAGCAAATTTAATCAACTT+TGG 0.419401 3.1:+3752374 MS.gene78843:CDS
AGAAAAGATCAAAGACGGTT+GGG 0.422002 3.1:+3752400 MS.gene78843:CDS
CCCATTATATCTATCAGAAA+TGG 0.423439 3.1:+3752286 MS.gene78843:CDS
TCATCAATCACAAGAGCCTT+TGG 0.425277 3.1:+3751341 MS.gene78843:CDS
GGTCGTGTTCTTCTTGGAGT+TGG 0.425536 3.1:+3751455 MS.gene78843:CDS
TTCCAACTATGTGTTGGAAT+TGG 0.441232 3.1:+3752344 MS.gene78843:CDS
CTTATTGGAGCAGCTCTTGG+TGG 0.464561 3.1:+3751401 MS.gene78843:CDS
CACCAATTCCAACACATAGT+TGG 0.481665 3.1:-3752346 None:intergenic
CCATTTCTGATAGATATAAT+GGG 0.482018 3.1:-3752286 None:intergenic
TGCAGGTGGTGTAACATCAA+TGG 0.504221 3.1:+3751169 MS.gene78843:intron
ATACAAGAGAGAATCACAAT+AGG 0.504849 3.1:-3750227 None:intergenic
GTGATGAAGTGAATGTTGTT+AGG 0.505701 3.1:-3751283 None:intergenic
TTAATGCTGCAATCCATAAG+AGG 0.508403 3.1:+3752545 MS.gene78843:CDS
ACTTCATCACTATATATAGC+TGG 0.520261 3.1:+3751296 MS.gene78843:CDS
ATGGCACTTCCAAGATATAG+AGG 0.524996 3.1:+3752305 MS.gene78843:CDS
AATATATACATGCTAATACT+TGG 0.530434 3.1:+3751434 MS.gene78843:CDS
CAGAAAAGATCAAAGACGGT+TGG 0.543560 3.1:+3752399 MS.gene78843:CDS
GAGCTACCAATTGCAAGCAA+TGG 0.546840 3.1:+3750179 MS.gene78843:CDS
CGCAAACCATCAATTCTTGT+AGG 0.548548 3.1:+3751365 MS.gene78843:CDS
AATGGCTTCCAACTATGTGT+TGG 0.553875 3.1:+3752338 MS.gene78843:CDS
CCTAAAGTGAGGATTAAAGC+TGG 0.553920 3.1:-3752455 None:intergenic
TAAAGCTGGAACTGCTGCCA+TGG 0.554550 3.1:-3752441 None:intergenic
AATTGATGGTTTGCGACCAA+AGG 0.563264 3.1:-3751357 None:intergenic
GAAAAGATCAAAGACGGTTG+GGG 0.563993 3.1:+3752401 MS.gene78843:CDS
AGCACTTTCGCCTAATCCAA+TGG 0.569123 3.1:-3752762 None:intergenic
AAGTGAATGTTGTTAGGAGT+TGG 0.571646 3.1:-3751277 None:intergenic
TGTGATTCTCTCTTGTATGG+TGG 0.579802 3.1:+3750232 MS.gene78843:CDS
TGCAACTGTAATACTTTGCG+CGG 0.587190 3.1:-3753089 None:intergenic
CCAATTGCAAGCAATGGAAG+AGG 0.588796 3.1:+3750185 MS.gene78843:CDS
AGATCAAAGACGGTTGGGGA+TGG 0.591219 3.1:+3752405 MS.gene78843:CDS
TGTATGGTGGCTGCCACTGG+AGG 0.591273 3.1:+3750245 MS.gene78843:CDS
GGTACAGAAAAGATCAAAGA+CGG 0.591721 3.1:+3752395 MS.gene78843:CDS
AGCAATGGAAGAGGATACAA+TGG 0.603683 3.1:+3750194 MS.gene78843:CDS
ATGGCGAATTTCTCTAGCCA+TGG 0.615608 3.1:+3752424 MS.gene78843:CDS
GACAAAATGCTCCTAAAGTG+AGG 0.616967 3.1:-3752466 None:intergenic
AAACCATCAATTCTTGTAGG+TGG 0.619483 3.1:+3751368 MS.gene78843:CDS
GCGGCTGATCTAATCTCCAA+TGG 0.626357 3.1:-3753070 None:intergenic
TATAGAGGAGCAATCAACAA+TGG 0.645205 3.1:+3752320 MS.gene78843:CDS
ACCGAATATAATGCCTCCAG+TGG 0.660482 3.1:-3750258 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTCAAATTTAAAAATTTA+AGG - chr3.1:3750920-3750939 None:intergenic 10.0%
!! TAAATATGTAAGTTAATATA+TGG + chr3.1:3751621-3751640 MS.gene78843:intron 10.0%
!! TATCTATAATAACTATATAA+GGG - chr3.1:3750616-3750635 None:intergenic 10.0%
!! AGAAAAACATTGTAATATAT+TGG - chr3.1:3751513-3751532 None:intergenic 15.0%
!! GTATCTATAATAACTATATA+AGG - chr3.1:3750617-3750636 None:intergenic 15.0%
!! TATGATATCATCTTAAAATT+TGG + chr3.1:3752014-3752033 MS.gene78843:intron 15.0%
!!! AAATTTTAAGATGATATCAT+AGG - chr3.1:3752015-3752034 None:intergenic 15.0%
!!! AATGAATATTTTTATCTAGT+CGG + chr3.1:3751715-3751734 MS.gene78843:intron 15.0%
!!! ATTTAAAGATTATTTGGTTT+TGG - chr3.1:3750952-3750971 None:intergenic 15.0%
!!! TCTACAGTTTTTTTTTTTAT+AGG - chr3.1:3750777-3750796 None:intergenic 15.0%
!! AAAATTCGTTGAAATTACAT+GGG + chr3.1:3750885-3750904 MS.gene78843:intron 20.0%
!! AATATATACATGCTAATACT+TGG + chr3.1:3751434-3751453 MS.gene78843:CDS 20.0%
!! ACATTAACATAAACTTTAGA+TGG + chr3.1:3752233-3752252 MS.gene78843:intron 20.0%
!! ACTAAAAAATAAAGTGTGTT+CGG - chr3.1:3751750-3751769 None:intergenic 20.0%
!! ACTATACAAAATAGATGATA+TGG + chr3.1:3750848-3750867 MS.gene78843:intron 20.0%
!! ATAATGAAAATGAGAGATAA+TGG + chr3.1:3751555-3751574 MS.gene78843:intron 20.0%
!! ATATAAGGGATCAAAAATAT+TGG - chr3.1:3750602-3750621 None:intergenic 20.0%
!! ATTATATTCGGTTATGATAT+AGG + chr3.1:3750269-3750288 MS.gene78843:CDS 20.0%
!! CAAAAAGAGAAAAAAATTGA+AGG - chr3.1:3751151-3751170 None:intergenic 20.0%
!! CAAATAATCTTTAAATTACG+AGG + chr3.1:3750956-3750975 MS.gene78843:intron 20.0%
!! CACTAAAATTTCTAAATATG+TGG - chr3.1:3751592-3751611 None:intergenic 20.0%
!! CTCGTAATTTAAAGATTATT+TGG - chr3.1:3750958-3750977 None:intergenic 20.0%
!! TATTAAGCTCTTTAATTCAT+TGG + chr3.1:3752188-3752207 MS.gene78843:intron 20.0%
!! TGTACAAAAGAAAATTAAGT+GGG - chr3.1:3751884-3751903 None:intergenic 20.0%
!! TTGTACAAAAGAAAATTAAG+TGG - chr3.1:3751885-3751904 None:intergenic 20.0%
!!! AAAAATTTATTTTCTTCTGC+AGG + chr3.1:3752259-3752278 MS.gene78843:intron 20.0%
!!! AAATCCAAAGTTTTTTTACA+TGG + chr3.1:3750982-3751001 MS.gene78843:intron 20.0%
!!! AATCCAAAGTTTTTTTACAT+GGG + chr3.1:3750983-3751002 MS.gene78843:intron 20.0%
!!! AATTCTAATAGGAAGTATAA+TGG + chr3.1:3752913-3752932 MS.gene78843:intron 20.0%
! AAAATAGATGATATGGTATG+AGG + chr3.1:3750855-3750874 MS.gene78843:intron 25.0%
! AAATAGATGATATGGTATGA+GGG + chr3.1:3750856-3750875 MS.gene78843:intron 25.0%
! AAATTCGTTGAAATTACATG+GGG + chr3.1:3750886-3750905 MS.gene78843:intron 25.0%
! AAGATTGTTATCGCAAAAAA+TGG - chr3.1:3750668-3750687 None:intergenic 25.0%
! CAAAATTCGTTGAAATTACA+TGG + chr3.1:3750884-3750903 MS.gene78843:intron 25.0%
! CAATCTCTTAAAATTTGTGT+CGG + chr3.1:3751811-3751830 MS.gene78843:intron 25.0%
! CCATTTCTGATAGATATAAT+GGG - chr3.1:3752289-3752308 None:intergenic 25.0%
! CTAATCCAATGGTTAAAAAT+AGG - chr3.1:3752754-3752773 None:intergenic 25.0%
! CTTTGTAAGATGTTCTTAAA+TGG - chr3.1:3752641-3752660 None:intergenic 25.0%
! GAAAAGATAATGAAGTTGAA+TGG - chr3.1:3750315-3750334 None:intergenic 25.0%
! GATGATCAAAAGTTCAAAAT+TGG - chr3.1:3752126-3752145 None:intergenic 25.0%
! TAAATCAAAATTTGCCCAAA+TGG + chr3.1:3751007-3751026 MS.gene78843:intron 25.0%
! TATCCCATGTAAAAAAACTT+TGG - chr3.1:3750989-3751008 None:intergenic 25.0%
! TCAGCAAATTTAATCAACTT+TGG + chr3.1:3752374-3752393 MS.gene78843:CDS 25.0%
! TTCTTCTCACAAATTCTAAT+AGG + chr3.1:3752902-3752921 MS.gene78843:intron 25.0%
!! CATGTAATTTCAACGAATTT+TGG - chr3.1:3750886-3750905 None:intergenic 25.0%
!! CTTGAATCTTTATTTGATTG+TGG - chr3.1:3750379-3750398 None:intergenic 25.0%
!! TCACTTATAAACTCATTTTC+AGG + chr3.1:3752089-3752108 MS.gene78843:intron 25.0%
!!! CAATTTTTTTCTCTTTTTGC+AGG + chr3.1:3751152-3751171 MS.gene78843:intron 25.0%
!!! CTATTTTTAACCATTGGATT+AGG + chr3.1:3752752-3752771 MS.gene78843:CDS 25.0%
AAATAGGATTGGAGCATAAA+AGG - chr3.1:3752738-3752757 None:intergenic 30.0%
AAGCAAAGAAAGATGCTAAA+AGG - chr3.1:3751322-3751341 None:intergenic 30.0%
ACATGATACTTGCTTCAATA+AGG - chr3.1:3752601-3752620 None:intergenic 30.0%
ACTTCATCACTATATATAGC+TGG + chr3.1:3751296-3751315 MS.gene78843:CDS 30.0%
AGCTCTTTAATTCATTGGAT+TGG + chr3.1:3752193-3752212 MS.gene78843:intron 30.0%
ATACAAGAGAGAATCACAAT+AGG - chr3.1:3750230-3750249 None:intergenic 30.0%
CCAATGGTTAAAAATAGGAT+TGG - chr3.1:3752749-3752768 None:intergenic 30.0%
CCCATTATATCTATCAGAAA+TGG + chr3.1:3752286-3752305 MS.gene78843:CDS 30.0%
GCCATTTCTGATAGATATAA+TGG - chr3.1:3752290-3752309 None:intergenic 30.0%
GGAAAAAACTTCTCCAAAAA+TGG - chr3.1:3751197-3751216 None:intergenic 30.0%
GGTTATGATATAGGAATTTC+AGG + chr3.1:3750278-3750297 MS.gene78843:CDS 30.0%
TAGGACAAAACTGAACTATT+AGG + chr3.1:3751664-3751683 MS.gene78843:intron 30.0%
TATTGTGATTCTCTCTTGTA+TGG + chr3.1:3750229-3750248 MS.gene78843:CDS 30.0%
TGATGTTCAACAAGAATTTG+AGG + chr3.1:3752574-3752593 MS.gene78843:intron 30.0%
TTGATATGCATTTATGTTGC+CGG + chr3.1:3752995-3753014 MS.gene78843:intron 30.0%
! TGGATTGGATACTATTATCT+TGG + chr3.1:3752208-3752227 MS.gene78843:intron 30.0%
!! ATATAGACCTCAACTTGTTA+TGG + chr3.1:3752664-3752683 MS.gene78843:intron 30.0%
!! GCATTAACTTAGCTTTTTGA+TGG - chr3.1:3752532-3752551 None:intergenic 30.0%
!! TTCACTTTTATCTGCAGTTA+TGG + chr3.1:3752784-3752803 MS.gene78843:CDS 30.0%
!!! CCAATCCTATTTTTAACCAT+TGG + chr3.1:3752746-3752765 MS.gene78843:CDS 30.0%
!!! TTTGATGGTTTTTGCTGTTT+TGG - chr3.1:3752517-3752536 None:intergenic 30.0%
!!! TTTTTTTCTCTTTTTGCAGG+TGG + chr3.1:3751155-3751174 MS.gene78843:intron 30.0%
AAAATTTGCCCAAATGGCAT+AGG + chr3.1:3751013-3751032 MS.gene78843:intron 35.0%
AAACCATCAATTCTTGTAGG+TGG + chr3.1:3751368-3751387 MS.gene78843:CDS 35.0%
AAATTTGCCCAAATGGCATA+GGG + chr3.1:3751014-3751033 MS.gene78843:intron 35.0%
AACATCATGTGTACCTCTTA+TGG - chr3.1:3752561-3752580 None:intergenic 35.0%
AAGTGAATGTTGTTAGGAGT+TGG - chr3.1:3751280-3751299 None:intergenic 35.0%
AGAAAAGATCAAAGACGGTT+GGG + chr3.1:3752400-3752419 MS.gene78843:CDS 35.0%
AGATACAAGTAGTGTACAAG+TGG + chr3.1:3750631-3750650 MS.gene78843:intron 35.0%
ATGCTCATAGTCGATAAACT+AGG + chr3.1:3752842-3752861 MS.gene78843:intron 35.0%
CCTGTGAATTGTTGGAAAAA+AGG - chr3.1:3752701-3752720 None:intergenic 35.0%
GGTACAGAAAAGATCAAAGA+CGG + chr3.1:3752395-3752414 MS.gene78843:CDS 35.0%
GTCAGTGCAAAACATGTTTA+TGG + chr3.1:3752151-3752170 MS.gene78843:intron 35.0%
GTCTTTACATCACTGTCATT+TGG + chr3.1:3750732-3750751 MS.gene78843:intron 35.0%
GTGATGAAGTGAATGTTGTT+AGG - chr3.1:3751286-3751305 None:intergenic 35.0%
TATAGAGGAGCAATCAACAA+TGG + chr3.1:3752320-3752339 MS.gene78843:CDS 35.0%
TATTAGGTCGAAGAGTTTCA+AGG + chr3.1:3751680-3751699 MS.gene78843:intron 35.0%
TCCAATGGAAAAATCTCACT+AGG - chr3.1:3753058-3753077 None:intergenic 35.0%
TTAATGCTGCAATCCATAAG+AGG + chr3.1:3752545-3752564 MS.gene78843:CDS 35.0%
TTCCAACTATGTGTTGGAAT+TGG + chr3.1:3752344-3752363 MS.gene78843:CDS 35.0%
TTGATTGCTCCTCTATATCT+TGG - chr3.1:3752317-3752336 None:intergenic 35.0%
! CTTTTATCTGCAGTTATGGT+AGG + chr3.1:3752788-3752807 MS.gene78843:intron 35.0%
! TCCTAGTGAGATTTTTCCAT+TGG + chr3.1:3753054-3753073 MS.gene78843:CDS 35.0%
! TTCATCTTGGTGTATACATC+TGG - chr3.1:3751218-3751237 None:intergenic 35.0%
!! AAACTGACTTGTATAGGTGA+GGG + chr3.1:3751852-3751871 MS.gene78843:intron 35.0%
!! ATTATGCTGTTTGGTGTTTC+TGG - chr3.1:3752494-3752513 None:intergenic 35.0%
!! CATGTGAAACTGACTTGTAT+AGG + chr3.1:3751846-3751865 MS.gene78843:intron 35.0%
!! CATTGATTCCTGTGAATTGT+TGG - chr3.1:3752709-3752728 None:intergenic 35.0%
!! CTGTTTTGGATTATGCTGTT+TGG - chr3.1:3752503-3752522 None:intergenic 35.0%
!! CTTGTTGTCTTGTTTCATCT+TGG - chr3.1:3751231-3751250 None:intergenic 35.0%
!! TTATGCTGTTTGGTGTTTCT+GGG - chr3.1:3752493-3752512 None:intergenic 35.0%
!!! AACATCAATGGTGCCATTTT+TGG + chr3.1:3751181-3751200 MS.gene78843:CDS 35.0%
!!! AGAGTTTTGTTCATATCAGG+TGG + chr3.1:3752869-3752888 MS.gene78843:intron 35.0%
!!! CCTTTTTTCCAACAATTCAC+AGG + chr3.1:3752698-3752717 MS.gene78843:intron 35.0%
!!! CGAAGAGTTTTGTTCATATC+AGG + chr3.1:3752866-3752885 MS.gene78843:intron 35.0%
!!! TCTCACAAGTCGGTTTTTTA+TGG - chr3.1:3752056-3752075 None:intergenic 35.0%
AATGGCTTCCAACTATGTGT+TGG + chr3.1:3752338-3752357 MS.gene78843:CDS 40.0%
ACATTCCTCTTCTCACAAGT+CGG - chr3.1:3752066-3752085 None:intergenic 40.0%
AGCAATGGAAGAGGATACAA+TGG + chr3.1:3750194-3750213 MS.gene78843:CDS 40.0%
AGTATAATGGCAGCACAACT+TGG + chr3.1:3752926-3752945 MS.gene78843:intron 40.0%
ATACTTGGTCGTGTTCTTCT+TGG + chr3.1:3751449-3751468 MS.gene78843:CDS 40.0%
ATGGCACTTCCAAGATATAG+AGG + chr3.1:3752305-3752324 MS.gene78843:CDS 40.0%
CACCAATTCCAACACATAGT+TGG - chr3.1:3752349-3752368 None:intergenic 40.0%
CAGAAAAGATCAAAGACGGT+TGG + chr3.1:3752399-3752418 MS.gene78843:CDS 40.0%
CCTAAAGTGAGGATTAAAGC+TGG - chr3.1:3752458-3752477 None:intergenic 40.0%
CGCAAACCATCAATTCTTGT+AGG + chr3.1:3751365-3751384 MS.gene78843:CDS 40.0%
GAAAAGATCAAAGACGGTTG+GGG + chr3.1:3752401-3752420 MS.gene78843:CDS 40.0%
GACAAAATGCTCCTAAAGTG+AGG - chr3.1:3752469-3752488 None:intergenic 40.0%
GCAGTTATGGTAGGAATTGT+AGG + chr3.1:3752797-3752816 MS.gene78843:intron 40.0%
GCTATTGCCATAACAAGTTG+AGG - chr3.1:3752674-3752693 None:intergenic 40.0%
GTCACACTAGACATATGTCT+GGG - chr3.1:3751945-3751964 None:intergenic 40.0%
GTTCTTCTTGGAGTTGGAAT+TGG + chr3.1:3751461-3751480 MS.gene78843:CDS 40.0%
TCATCAATCACAAGAGCCTT+TGG + chr3.1:3751341-3751360 MS.gene78843:CDS 40.0%
TGCAACTGTAATACTTTGCG+CGG - chr3.1:3753092-3753111 None:intergenic 40.0%
TGTGATTCTCTCTTGTATGG+TGG + chr3.1:3750232-3750251 MS.gene78843:CDS 40.0%
! AATTGATGGTTTGCGACCAA+AGG - chr3.1:3751360-3751379 None:intergenic 40.0%
! CCAGCTTTAATCCTCACTTT+AGG + chr3.1:3752455-3752474 MS.gene78843:CDS 40.0%
! GAGAGATAATGGCACTCTTT+AGG + chr3.1:3751566-3751585 MS.gene78843:intron 40.0%
! GTGTTTACCCTATGCCATTT+GGG - chr3.1:3751024-3751043 None:intergenic 40.0%
! TTTATGTTGCCGGATTTGCT+TGG + chr3.1:3753005-3753024 MS.gene78843:intron 40.0%
!! AAAAACCGACTTGTGAGAAG+AGG + chr3.1:3752058-3752077 MS.gene78843:intron 40.0%
!! GAAACTGACTTGTATAGGTG+AGG + chr3.1:3751851-3751870 MS.gene78843:intron 40.0%
!! TGGAATTGGCTTTGCTAATC+AGG + chr3.1:3751475-3751494 MS.gene78843:CDS 40.0%
ACCGAATATAATGCCTCCAG+TGG - chr3.1:3750261-3750280 None:intergenic 45.0%
AGCACTTTCGCCTAATCCAA+TGG - chr3.1:3752765-3752784 None:intergenic 45.0%
ATGGCGAATTTCTCTAGCCA+TGG + chr3.1:3752424-3752443 MS.gene78843:CDS 45.0%
CCAATTGCAAGCAATGGAAG+AGG + chr3.1:3750185-3750204 MS.gene78843:CDS 45.0%
CCTCTTCCATTGCTTGCAAT+TGG - chr3.1:3750188-3750207 None:intergenic 45.0%
CGTCACACTAGACATATGTC+TGG - chr3.1:3751946-3751965 None:intergenic 45.0%
CGTGTTTACCCTATGCCATT+TGG - chr3.1:3751025-3751044 None:intergenic 45.0%
CTAGGAACCAACCATCCTAA+TGG - chr3.1:3753040-3753059 None:intergenic 45.0%
GAGCTACCAATTGCAAGCAA+TGG + chr3.1:3750179-3750198 MS.gene78843:CDS 45.0%
GCACCACCTACAAGAATTGA+TGG - chr3.1:3751374-3751393 None:intergenic 45.0%
TATGTCTAGTGTGACGTGAG+TGG + chr3.1:3751950-3751969 MS.gene78843:intron 45.0%
TGCAGGTGGTGTAACATCAA+TGG + chr3.1:3751169-3751188 MS.gene78843:intron 45.0%
TTCCTTATTGGAGCAGCTCT+TGG + chr3.1:3751398-3751417 MS.gene78843:CDS 45.0%
!! GCCACTGGAGGCATTATATT+CGG + chr3.1:3750257-3750276 MS.gene78843:CDS 45.0%
ACATATGTCTGGGCGTGAAG+GGG - chr3.1:3751935-3751954 None:intergenic 50.0%
AGACATATGTCTGGGCGTGA+AGG - chr3.1:3751937-3751956 None:intergenic 50.0%
AGATCAAAGACGGTTGGGGA+TGG + chr3.1:3752405-3752424 MS.gene78843:CDS 50.0%
CACCAAGAGCTGCTCCAATA+AGG - chr3.1:3751403-3751422 None:intergenic 50.0%
CTTATTGGAGCAGCTCTTGG+TGG + chr3.1:3751401-3751420 MS.gene78843:CDS 50.0%
GACATATGTCTGGGCGTGAA+GGG - chr3.1:3751936-3751955 None:intergenic 50.0%
GCGGCTGATCTAATCTCCAA+TGG - chr3.1:3753073-3753092 None:intergenic 50.0%
GGTCGTGTTCTTCTTGGAGT+TGG + chr3.1:3751455-3751474 MS.gene78843:CDS 50.0%
GTCCTAGCAGCGTGTCATAA+AGG - chr3.1:3751650-3751669 None:intergenic 50.0%
TAAAGCTGGAACTGCTGCCA+TGG - chr3.1:3752444-3752463 None:intergenic 50.0%
TGCCTTTATGACACGCTGCT+AGG + chr3.1:3751645-3751664 MS.gene78843:intron 50.0%
! GCAGCACAACTTGGTGATCA+TGG + chr3.1:3752935-3752954 MS.gene78843:intron 50.0%
! TGCCGGATTTGCTTGGTCAT+GGG + chr3.1:3753012-3753031 MS.gene78843:intron 50.0%
! TTGCCGGATTTGCTTGGTCA+TGG + chr3.1:3753011-3753030 MS.gene78843:intron 50.0%
!! GGTGGTGCTGCATTCCTTAT+TGG + chr3.1:3751386-3751405 MS.gene78843:CDS 50.0%
ATGGGGGCCATTAGGATGGT+TGG + chr3.1:3753030-3753049 MS.gene78843:intron 55.0%
CCCCCATGACCAAGCAAATC+CGG - chr3.1:3753017-3753036 None:intergenic 55.0%
CCGAAATCCGTTGAGCTACC+CGG - chr3.1:3751988-3752007 None:intergenic 55.0%
TCTTGTATGGTGGCTGCCAC+TGG + chr3.1:3750242-3750261 MS.gene78843:CDS 55.0%
! CCGGATTTGCTTGGTCATGG+GGG + chr3.1:3753014-3753033 MS.gene78843:intron 55.0%
! CCGGGTAGCTCAACGGATTT+CGG + chr3.1:3751985-3752004 MS.gene78843:intron 55.0%
! GCCGGATTTGCTTGGTCATG+GGG + chr3.1:3753013-3753032 MS.gene78843:intron 55.0%
GCTTGGTCATGGGGGCCATT+AGG + chr3.1:3753022-3753041 MS.gene78843:intron 60.0%
GGTCATGGGGGCCATTAGGA+TGG + chr3.1:3753026-3753045 MS.gene78843:intron 60.0%
TGACGTGAGTGGCCCGATAG+CGG + chr3.1:3751961-3751980 MS.gene78843:intron 60.0%
TGTATGGTGGCTGCCACTGG+AGG + chr3.1:3750245-3750264 MS.gene78843:CDS 60.0%
GACGTGAGTGGCCCGATAGC+GGG + chr3.1:3751962-3751981 MS.gene78843:intron 65.0%
TGAGCTACCCGGCCCGCTAT+CGG - chr3.1:3751977-3751996 None:intergenic 65.0%
! TAGCGGGCCGGGTAGCTCAA+CGG + chr3.1:3751978-3751997 MS.gene78843:intron 65.0%
GAGCTACCCGGCCCGCTATC+GGG - chr3.1:3751976-3751995 None:intergenic 70.0%
!! TGAGTGGCCCGATAGCGGGC+CGG + chr3.1:3751966-3751985 MS.gene78843:intron 70.0%
!! GAGTGGCCCGATAGCGGGCC+GGG + chr3.1:3751967-3751986 MS.gene78843:intron 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 3750167 3753115 3750167 ID=MS.gene78843
chr3.1 mRNA 3750167 3753115 3750167 ID=MS.gene78843.t1;Parent=MS.gene78843
chr3.1 exon 3750167 3750299 3750167 ID=MS.gene78843.t1.exon1;Parent=MS.gene78843.t1
chr3.1 CDS 3750167 3750299 3750167 ID=cds.MS.gene78843.t1;Parent=MS.gene78843.t1
chr3.1 exon 3751174 3751496 3751174 ID=MS.gene78843.t1.exon2;Parent=MS.gene78843.t1
chr3.1 CDS 3751174 3751496 3751174 ID=cds.MS.gene78843.t1;Parent=MS.gene78843.t1
chr3.1 exon 3752281 3752566 3752281 ID=MS.gene78843.t1.exon3;Parent=MS.gene78843.t1
chr3.1 CDS 3752281 3752566 3752281 ID=cds.MS.gene78843.t1;Parent=MS.gene78843.t1
chr3.1 exon 3752720 3752805 3752720 ID=MS.gene78843.t1.exon4;Parent=MS.gene78843.t1
chr3.1 CDS 3752720 3752805 3752720 ID=cds.MS.gene78843.t1;Parent=MS.gene78843.t1
chr3.1 exon 3753044 3753115 3753044 ID=MS.gene78843.t1.exon5;Parent=MS.gene78843.t1
chr3.1 CDS 3753044 3753115 3753044 ID=cds.MS.gene78843.t1;Parent=MS.gene78843.t1
Gene Sequence

>MS.gene78843

ATGGCAGTAGTAGAGCTACCAATTGCAAGCAATGGAAGAGGATACAATGGAAAGATGACTCCTATTGTGATTCTCTCTTGTATGGTGGCTGCCACTGGAGGCATTATATTCGGTTATGATATAGGAATTTCAGGTCAATCTCATACCATTCAACTTCATTATCTTTTCTTACAATTATTAAATCACACTTTGCTTTTTGTGAATACACACCACAATCAAATAAAGATTCAAGTGATATTTTGTACTATCTTTAAAAAAAAAAAAAAAAGTGATATTTGTACTTTTTTTAAACTAATATAGTTGAGTTATTTCTATTATAATGAGATTTAACATATTATTTTAGTTAAAATTTTAAATAATATTATAAAAATTTAAAATTATAATTACTATACTTTAATTGAAAGATATAATTAGAAGAATGAAAAGATCAGTCCAATATTTTTGATCCCTTATATAGTTATTATAGATACAAGTAGTGTACAAGTGGATAATTTTTGTCCATTTTTTGCGATAACAATCTTGAAAATTACGAAATGTTATGCGATTATTTAAAAAAGATTAAATTGTCTTTACATCACTGTCATTTGGACGAATTTTGATTTATCTTCCTATAAAAAAAAAAACTGTAGATTTCAATCTTATAATTTAAAGATTTTTTATTTTGATCTTTCGTAAATTTTGACTATACAAAATAGATGATATGGTATGAGGGTAAACCAAAATTCGTTGAAATTACATGGGGTGAAAATACCTTAAATTTTTAAATTTGAAGTCATGAAAGTCCAAAACCAAATAATCTTTAAATTACGAGGTTGAAATCCAAAGTTTTTTTACATGGGATAAATCAAAATTTGCCCAAATGGCATAGGGTAAACACGATTTAACTAAAAAAAATGATATTTGATTGAATAAAGATAGATGAAATTGTAAATAAAAAGAAAAAATAAATAAAAGAAAAAATGAATACATCAACACTTAGAACCTTCAATTTTTTTCTCTTTTTGCAGGTGGTGTAACATCAATGGTGCCATTTTTGGAGAAGTTTTTTCCAGATGTATACACCAAGATGAAACAAGACAACAAGATAAGCAATTACTGCAAATTTGATAGCCAACTCCTAACAACATTCACTTCATCACTATATATAGCTGGCCTTTTAGCATCTTTCTTTGCTTCATCAATCACAAGAGCCTTTGGTCGCAAACCATCAATTCTTGTAGGTGGTGCTGCATTCCTTATTGGAGCAGCTCTTGGTGGTGCTGCACTTAATATATACATGCTAATACTTGGTCGTGTTCTTCTTGGAGTTGGAATTGGCTTTGCTAATCAGGTATAATCTTTCTCCAATATATTACAATGTTTTTCTAATTTATTTGATTTAGATGTCAATAATGAAAATGAGAGATAATGGCACTCTTTAGGCCACATATTTAGAAATTTTAGTGATAGTGACATAAATATGTAAGTTAATATATGGCTGCCTTTATGACACGCTGCTAGGACAAAACTGAACTATTAGGTCGAAGAGTTTCAAGGCTTAAGTATCACAATGAATATTTTTATCTAGTCGGTGTAGAAATCCGAACACACTTTATTTTTTAGTTTTAGACTATAATAGATGTAGTAAGACAATGAAATATGATACAATCTCTTAAAATTTGTGTCGGATCTAATTTAAGCATGTGAAACTGACTTGTATAGGTGAGGGATGTTTCCCACTTAATTTTCTTTTGTACAATATTTCATCAAATGTCGAACTTCTCAACCCCTTCACGCCCAGACATATGTCTAGTGTGACGTGAGTGGCCCGATAGCGGGCCGGGTAGCTCAACGGATTTCGGATAACCTATGATATCATCTTAAAATTTGGATTGAGTCTAACTCAACCATAAAAAACCGACTTGTGAGAAGAGGAATGTCTCTCACTTATAAACTCATTTTCAGGTAATATCTCATCCAATTTTGAACTTTTGATCATCATTATGTCAGTGCAAAACATGTTTATGGATTGAATCTATAGTTATTAAGCTCTTTAATTCATTGGATTGGATACTATTATCTTGGTAACATTAACATAAACTTTAGATGGATCAAAAATTTATTTTCTTCTGCAGGCAGTCCCATTATATCTATCAGAAATGGCACTTCCAAGATATAGAGGAGCAATCAACAATGGCTTCCAACTATGTGTTGGAATTGGTGTTTTATCAGCAAATTTAATCAACTTTGGTACAGAAAAGATCAAAGACGGTTGGGGATGGCGAATTTCTCTAGCCATGGCAGCAGTTCCAGCTTTAATCCTCACTTTAGGAGCATTTTGTCTCCCAGAAACACCAAACAGCATAATCCAAAACAGCAAAAACCATCAAAAAGCTAAGTTAATGCTGCAATCCATAAGAGGTACACATGATGTTCAACAAGAATTTGAGGACCTTATTGAAGCAAGTATCATGTCAAATTCTATCAAACATCCATTTAAGAACATCTTACAAAGAAAATATAGACCTCAACTTGTTATGGCAATAGCTATACCTTTTTTCCAACAATTCACAGGAATCAATGTCATTTCCTTTTATGCTCCAATCCTATTTTTAACCATTGGATTAGGCGAAAGTGCTTCACTTTTATCTGCAGTTATGGTAGGAATTGTAGGCACTACTTCAACATTCATATCAATGCTCATAGTCGATAAACTAGGTCGAAGAGTTTTGTTCATATCAGGTGGAATTCAAATGTTCTTCTCACAAATTCTAATAGGAAGTATAATGGCAGCACAACTTGGTGATCATGGTGAAATAAGCAAGAAATATGCATATTTGATTCTAGTTTTGATATGCATTTATGTTGCCGGATTTGCTTGGTCATGGGGGCCATTAGGATGGTTGGTTCCTAGTGAGATTTTTCCATTGGAGATTAGATCAGCCGCGCAAAGTATTACAGTTGCAGTGA
Protein sequence

>MS.gene78843.t1

MAVVELPIASNGRGYNGKMTPIVILSCMVAATGGIIFGYDIGISGGVTSMVPFLEKFFPDVYTKMKQDNKISNYCKFDSQLLTTFTSSLYIAGLLASFFASSITRAFGRKPSILVGGAAFLIGAALGGAALNIYMLILGRVLLGVGIGFANQAVPLYLSEMALPRYRGAINNGFQLCVGIGVLSANLINFGTEKIKDGWGWRISLAMAAVPALILTLGAFCLPETPNSIIQNSKNHQKAKLMLQSIRGINVISFYAPILFLTIGLGESASLLSAVMDGWFLVRFFHWRLDQPRKVLQLQ