AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058371


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058371.t1 MTR_3g008160 83.104 509 5 2 1 428 1 509 0.0 810
MS.gene058371.t1 MTR_3g008160 81.522 460 4 2 50 428 1 460 0.0 714
MS.gene058371.t1 MTR_3g008170 64.024 492 94 3 9 418 10 500 0.0 620
MS.gene058371.t1 MTR_5g082540 50.909 495 156 6 10 420 10 501 1.62e-163 470
MS.gene058371.t1 MTR_1g038630 48.988 494 165 6 13 422 13 503 1.07e-158 458
MS.gene058371.t1 MTR_0204s0020 48.755 482 165 4 15 416 13 492 5.14e-153 442
MS.gene058371.t1 MTR_5g006070 46.843 491 176 6 15 421 14 503 7.20e-152 441
MS.gene058371.t1 MTR_4g091370 49.095 497 168 5 13 424 13 509 4.58e-151 439
MS.gene058371.t1 MTR_5g094760 47.942 486 169 5 15 419 19 501 1.03e-150 437
MS.gene058371.t1 MTR_7g091690 49.482 483 160 5 15 416 19 498 1.99e-150 436
MS.gene058371.t1 MTR_0204s0020 48.133 482 165 5 15 416 13 489 5.98e-149 432
MS.gene058371.t1 MTR_5g041550 46.856 493 178 4 11 419 11 503 1.18e-147 430
MS.gene058371.t1 MTR_4g116790 45.363 496 187 5 8 421 10 503 1.50e-145 425
MS.gene058371.t1 MTR_3g093010 46.122 490 180 4 11 416 10 499 3.23e-145 423
MS.gene058371.t1 MTR_0204s0040 45.567 485 182 4 15 419 21 503 9.69e-145 422
MS.gene058371.t1 MTR_1g104780 46.600 500 179 8 11 424 10 507 6.52e-144 421
MS.gene058371.t1 MTR_1g038600 46.856 493 159 7 13 422 13 485 3.33e-143 417
MS.gene058371.t1 MTR_1g104770 44.720 483 184 6 15 414 15 497 3.67e-143 418
MS.gene058371.t1 MTR_4g116770 45.567 485 182 4 15 419 217 699 6.41e-142 421
MS.gene058371.t1 MTR_4g090600 46.078 510 185 5 1 421 1 509 2.67e-140 411
MS.gene058371.t1 MTR_1g104750 44.720 483 183 5 15 414 15 496 4.30e-140 410
MS.gene058371.t1 MTR_0009s0370 45.363 496 185 5 15 425 13 507 3.51e-139 408
MS.gene058371.t1 MTR_3g074390 42.515 501 199 6 1 416 6 502 8.18e-135 397
MS.gene058371.t1 MTR_3g023480 44.266 497 190 6 15 426 13 507 3.01e-133 393
MS.gene058371.t1 MTR_6g087040 42.596 493 199 4 15 425 18 508 1.85e-132 391
MS.gene058371.t1 MTR_6g088375 42.596 493 199 4 15 425 18 508 1.85e-132 391
MS.gene058371.t1 MTR_3g074410 42.276 492 196 6 18 424 20 508 2.29e-131 388
MS.gene058371.t1 MTR_5g006070 45.175 456 165 6 50 421 1 455 4.33e-131 386
MS.gene058371.t1 MTR_8g102860 41.955 491 203 3 15 424 18 507 2.36e-125 373
MS.gene058371.t1 MTR_3g093060 44.444 450 165 4 50 414 1 450 1.29e-123 367
MS.gene058371.t1 MTR_3g074270 40.486 494 186 6 16 428 16 482 4.04e-122 363
MS.gene058371.t1 MTR_3g007910 41.463 492 174 7 13 421 12 472 1.19e-119 357
MS.gene058371.t1 MTR_8g102860 41.009 456 187 3 50 424 1 455 1.11e-110 333
MS.gene058371.t1 MTR_4g116790 45.531 358 141 4 8 313 10 365 2.06e-102 310
MS.gene058371.t1 MTR_3g074380 44.928 345 135 3 17 309 20 361 3.65e-97 296
MS.gene058371.t1 MTR_3g074400 36.232 414 189 9 50 419 1 383 2.46e-72 233
MS.gene058371.t1 MTR_3g074370 34.796 319 120 5 188 421 20 335 3.42e-57 191
MS.gene058371.t1 MTR_3g074340 34.483 319 121 5 188 421 20 335 9.08e-57 190
MS.gene058371.t1 MTR_3g074320 34.483 319 121 5 188 421 20 335 1.77e-56 189
MS.gene058371.t1 MTR_3g074330 56.291 151 56 3 9 152 11 158 4.17e-48 162
MS.gene058371.t1 MTR_3g074360 56.291 151 56 3 9 152 11 158 4.17e-48 162
MS.gene058371.t1 MTR_3g074310 55.629 151 57 3 9 152 11 158 2.32e-47 160
MS.gene058371.t1 MTR_5g096000 52.047 171 63 1 13 183 12 163 1.48e-46 162
MS.gene058371.t1 MTR_5g096000 45.312 128 40 1 324 421 176 303 5.34e-30 118
MS.gene058371.t1 MTR_0064s0040 48.299 147 64 1 6 152 7 141 3.46e-38 135
MS.gene058371.t1 MTR_6g088450 26.526 426 231 9 28 393 63 466 1.27e-35 137
MS.gene058371.t1 MTR_8g103500 25.223 448 250 9 8 392 1 426 2.24e-33 131
MS.gene058371.t1 MTR_1g116650 24.940 417 247 9 20 393 75 468 4.11e-31 125
MS.gene058371.t1 MTR_3g084110 23.095 433 254 8 20 396 25 434 6.80e-31 124
MS.gene058371.t1 MTR_4g072030 24.201 438 242 9 27 396 31 446 1.59e-30 123
MS.gene058371.t1 MTR_7g005910 24.130 431 251 9 20 396 30 438 6.09e-30 121
MS.gene058371.t1 MTR_1g116660 23.832 428 251 8 20 393 32 438 9.72e-30 121
MS.gene058371.t1 MTR_3g116240 24.717 441 239 10 27 396 32 450 2.46e-28 117
MS.gene058371.t1 MTR_2g013310 25.000 436 242 11 24 399 53 463 1.83e-27 114
MS.gene058371.t1 MTR_4g069500 25.270 463 251 13 3 392 6 446 3.68e-27 114
MS.gene058371.t1 MTR_7g446340 23.148 432 249 9 23 396 55 461 7.23e-27 113
MS.gene058371.t1 MTR_6g007340 23.148 432 249 9 23 396 55 461 7.23e-27 113
MS.gene058371.t1 MTR_2g013310 26.667 345 190 6 89 375 26 365 1.28e-26 111
MS.gene058371.t1 MTR_7g082270 25.339 442 246 13 6 396 53 461 3.23e-26 110
MS.gene058371.t1 MTR_6g018790 25.225 444 248 9 5 396 90 501 1.51e-25 109
MS.gene058371.t1 MTR_4g069500 26.685 371 201 9 91 392 28 396 1.71e-24 105
MS.gene058371.t1 MTR_5g020270 25.467 428 224 10 23 390 50 442 3.01e-24 105
MS.gene058371.t1 MTR_7g082270 24.413 426 240 10 6 381 53 446 6.43e-24 103
MS.gene058371.t1 MTR_8g077310 24.299 428 229 9 23 390 47 439 6.51e-24 103
MS.gene058371.t1 MTR_8g077890 26.941 438 223 14 28 392 24 437 2.59e-23 102
MS.gene058371.t1 MTR_5g020270 27.114 343 175 8 108 390 15 342 1.04e-22 99.4
MS.gene058371.t1 MTR_5g077580 22.928 567 248 17 20 419 23 567 1.14e-22 100
MS.gene058371.t1 MTR_4g013205 25.956 366 191 10 95 402 90 433 1.29e-22 100
MS.gene058371.t1 MTR_8g077310 25.862 348 183 8 103 390 10 342 2.70e-22 98.2
MS.gene058371.t1 MTR_1g022315 23.898 431 239 10 18 390 43 442 9.00e-22 97.8
MS.gene058371.t1 MTR_1g022315 25.507 345 189 7 103 390 10 343 2.52e-21 95.5
MS.gene058371.t1 MTR_6g087910 24.128 344 201 6 94 387 103 436 2.80e-21 96.3
MS.gene058371.t1 MTR_1g038620 39.286 140 50 2 204 309 50 188 4.87e-21 90.5
MS.gene058371.t1 MTR_2g048720 28.333 300 183 5 20 319 23 290 5.08e-21 95.9
MS.gene058371.t1 MTR_4g118610 25.629 437 239 11 8 391 38 441 7.18e-21 95.1
MS.gene058371.t1 MTR_2g049020 30.195 308 170 12 20 319 23 293 1.10e-20 94.7
MS.gene058371.t1 MTR_1g114280 37.241 145 78 3 287 418 11 155 1.26e-20 88.6
MS.gene058371.t1 MTR_7g113970 23.947 451 239 11 8 391 37 450 6.09e-20 92.4
MS.gene058371.t1 MTR_8g077300 23.934 422 238 8 23 390 39 431 7.16e-20 92.0
MS.gene058371.t1 MTR_5g075300 27.632 228 144 4 18 244 14 221 4.28e-19 89.7
MS.gene058371.t1 MTR_2g026160 29.075 227 141 4 20 246 24 230 7.94e-19 89.4
MS.gene058371.t1 MTR_5g019870 24.814 403 219 14 65 393 43 435 2.12e-18 87.8
MS.gene058371.t1 MTR_5g020270 25.000 408 230 13 23 390 50 421 9.76e-18 85.5
MS.gene058371.t1 MTR_7g113960 22.588 425 241 8 20 391 24 413 1.03e-16 82.4
MS.gene058371.t1 MTR_4g064820 29.958 237 137 6 23 248 96 314 1.14e-16 82.4
MS.gene058371.t1 MTR_4g077740 27.354 223 139 4 24 240 46 251 4.57e-16 80.5
MS.gene058371.t1 MTR_4g077740 29.747 158 102 2 241 397 311 460 2.82e-11 65.5
MS.gene058371.t1 MTR_5g024740 26.609 233 148 6 23 253 4 215 5.91e-16 80.5
MS.gene058371.t1 MTR_3g080240 21.480 419 247 11 28 393 98 487 6.13e-16 80.1
MS.gene058371.t1 MTR_8g077310 24.398 332 170 7 23 302 47 349 7.61e-16 79.3
MS.gene058371.t1 MTR_2g020710 24.122 427 231 11 22 391 48 438 1.45e-15 79.0
MS.gene058371.t1 MTR_3g116060 29.557 203 136 4 74 271 31 231 1.75e-15 79.3
MS.gene058371.t1 MTR_2g020710 25.000 364 200 9 85 391 2 349 3.35e-15 77.4
MS.gene058371.t1 MTR_3g118530 28.022 182 128 3 91 271 54 233 1.48e-14 76.3
MS.gene058371.t1 MTR_3g118530 28.022 182 128 3 91 271 54 233 3.30e-14 75.1
MS.gene058371.t1 MTR_5g044910 26.061 165 119 3 90 253 53 215 9.10e-14 73.9
MS.gene058371.t1 MTR_4g118610 24.205 409 224 10 8 363 38 413 1.54e-13 72.4
MS.gene058371.t1 MTR_8g073100 26.554 177 127 3 78 253 41 215 6.81e-13 70.9
MS.gene058371.t1 MTR_4g069500 28.477 151 104 3 244 392 109 257 1.07e-12 69.3
MS.gene058371.t1 MTR_2g026140 24.234 359 178 11 29 326 30 355 7.76e-12 67.4
MS.gene058371.t1 MTR_1g093115 50.794 63 30 1 161 222 1 63 2.91e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058371.t1 AT5G61520 51.406 498 152 7 17 427 18 512 1.51e-163 470
MS.gene058371.t1 AT3G19930 50.816 490 156 5 13 419 13 500 6.02e-163 469
MS.gene058371.t1 AT3G19930 50.816 490 156 5 13 419 13 500 6.02e-163 469
MS.gene058371.t1 AT1G11260 48.571 490 167 4 13 418 13 501 2.03e-156 452
MS.gene058371.t1 AT5G26340 48.276 493 172 6 10 419 10 502 2.06e-155 450
MS.gene058371.t1 AT3G19940 48.554 484 164 5 19 419 21 502 7.85e-155 448
MS.gene058371.t1 AT4G02050 48.140 484 169 6 15 418 19 500 9.81e-154 445
MS.gene058371.t1 AT4G02050 48.140 484 169 6 15 418 19 500 9.81e-154 445
MS.gene058371.t1 AT5G23270 48.770 488 165 6 11 414 12 498 2.29e-151 439
MS.gene058371.t1 AT4G21480 47.410 502 179 5 1 419 1 500 2.37e-150 436
MS.gene058371.t1 AT1G50310 47.216 485 170 5 19 419 21 503 3.72e-149 434
MS.gene058371.t1 AT5G61520 50.429 466 141 7 49 427 2 464 3.68e-147 427
MS.gene058371.t1 AT1G34580 43.496 492 188 6 10 414 11 499 1.03e-137 404
MS.gene058371.t1 AT1G77210 41.513 489 202 4 15 421 18 504 8.87e-131 386
MS.gene058371.t1 AT1G77210 41.513 489 202 4 15 421 18 504 8.87e-131 386
MS.gene058371.t1 AT1G07340 43.825 502 194 7 1 418 1 498 2.64e-129 382
MS.gene058371.t1 AT5G26250 41.865 504 205 8 1 421 1 499 2.27e-124 370
MS.gene058371.t1 AT1G34580 42.257 452 171 6 50 414 1 449 7.94e-120 357
MS.gene058371.t1 AT3G05960 40.452 487 205 6 10 414 8 491 3.00e-117 352
MS.gene058371.t1 AT1G50310 42.330 352 117 5 152 419 11 360 5.30e-88 272
MS.gene058371.t1 AT1G77210 37.216 352 137 4 152 421 6 355 1.80e-73 234
MS.gene058371.t1 AT2G18480 24.211 475 228 11 37 406 36 483 2.36e-30 123
MS.gene058371.t1 AT2G16130 25.727 447 243 11 16 393 19 445 5.05e-26 110
MS.gene058371.t1 AT5G16150 23.182 440 252 10 6 393 93 498 9.70e-25 107
MS.gene058371.t1 AT5G16150 23.182 440 252 10 6 393 93 498 9.70e-25 107
MS.gene058371.t1 AT5G16150 23.182 440 252 10 6 393 93 498 9.70e-25 107
MS.gene058371.t1 AT3G18830 23.973 438 237 11 27 392 40 453 1.51e-24 106
MS.gene058371.t1 AT1G67300 24.207 347 198 7 95 387 105 440 8.97e-24 103
MS.gene058371.t1 AT2G43330 24.113 423 241 9 27 392 35 434 9.66e-24 103
MS.gene058371.t1 AT4G36670 26.185 443 226 15 25 392 18 434 1.19e-23 103
MS.gene058371.t1 AT2G20780 22.172 442 263 9 11 396 43 459 1.75e-23 103
MS.gene058371.t1 AT1G67300 23.919 347 198 7 95 387 105 439 1.85e-23 102
MS.gene058371.t1 AT1G67300 23.919 347 198 7 95 387 105 439 1.85e-23 102
MS.gene058371.t1 AT3G05165 22.902 441 242 10 16 391 23 430 2.16e-23 102
MS.gene058371.t1 AT3G05165 22.902 441 242 10 16 391 23 430 2.16e-23 102
MS.gene058371.t1 AT3G05165 22.902 441 242 10 16 391 23 430 2.16e-23 102
MS.gene058371.t1 AT1G08900 23.352 364 205 7 85 391 67 413 4.40e-23 101
MS.gene058371.t1 AT1G08900 23.352 364 205 7 85 391 25 371 4.63e-23 100
MS.gene058371.t1 AT1G08900 23.352 364 205 7 85 391 59 405 5.35e-23 101
MS.gene058371.t1 AT3G05165 22.759 435 249 10 10 391 18 418 7.06e-23 101
MS.gene058371.t1 AT1G08900 23.352 364 205 7 85 391 67 413 7.51e-23 100
MS.gene058371.t1 AT1G08900 23.352 364 205 7 85 391 67 413 7.51e-23 100
MS.gene058371.t1 AT3G05165 23.002 413 232 9 16 375 23 402 9.20e-23 100
MS.gene058371.t1 AT3G05165 23.002 413 232 9 16 375 23 402 9.20e-23 100
MS.gene058371.t1 AT1G67300 23.684 342 195 7 95 382 105 434 3.05e-22 99.0
MS.gene058371.t1 AT1G67300 23.684 342 195 7 95 382 105 434 3.05e-22 99.0
MS.gene058371.t1 AT1G75220 24.065 428 241 9 18 390 42 440 9.87e-22 97.8
MS.gene058371.t1 AT1G67300 23.739 337 191 7 95 377 105 429 2.18e-21 96.3
MS.gene058371.t1 AT1G67300 23.739 337 191 7 95 377 105 429 2.18e-21 96.3
MS.gene058371.t1 AT5G17010 26.364 440 233 14 24 397 48 462 3.74e-21 95.9
MS.gene058371.t1 AT5G17010 26.364 440 233 14 24 397 48 462 3.74e-21 95.9
MS.gene058371.t1 AT5G17010 26.364 440 233 14 24 397 48 462 3.74e-21 95.9
MS.gene058371.t1 AT1G08890 23.823 361 207 7 85 391 69 415 4.15e-21 95.5
MS.gene058371.t1 AT3G03090 24.306 432 238 8 31 397 55 462 5.61e-21 95.5
MS.gene058371.t1 AT3G05150 24.434 442 243 10 6 391 18 424 2.29e-20 93.6
MS.gene058371.t1 AT3G05150 24.434 442 243 10 6 391 18 424 2.68e-20 93.2
MS.gene058371.t1 AT3G05150 24.434 442 243 10 6 391 18 424 2.68e-20 93.2
MS.gene058371.t1 AT1G19450 25.349 430 233 11 18 390 43 441 3.29e-20 93.2
MS.gene058371.t1 AT3G05160 22.222 441 245 10 16 391 14 421 4.30e-20 92.4
MS.gene058371.t1 AT3G05400 23.944 426 244 11 16 391 19 414 9.46e-20 91.7
MS.gene058371.t1 AT1G54730 24.337 415 230 8 29 391 38 420 1.22e-19 90.9
MS.gene058371.t1 AT5G27350 23.690 439 249 11 6 391 14 419 1.38e-19 91.3
MS.gene058371.t1 AT1G54730 24.337 415 230 8 29 391 38 420 1.40e-19 91.3
MS.gene058371.t1 AT2G20780 22.481 387 233 8 66 396 26 401 1.60e-19 90.9
MS.gene058371.t1 AT1G08930 23.583 441 248 12 5 391 41 446 1.72e-19 90.9
MS.gene058371.t1 AT1G08930 23.583 441 248 12 5 391 41 446 1.72e-19 90.9
MS.gene058371.t1 AT3G05160 22.652 362 216 6 82 391 11 360 2.47e-19 89.7
MS.gene058371.t1 AT3G05160 22.652 362 216 6 82 391 11 360 2.47e-19 89.7
MS.gene058371.t1 AT5G27360 23.462 439 250 11 6 391 18 423 8.72e-19 89.0
MS.gene058371.t1 AT5G27360 23.462 439 250 11 6 391 66 471 1.87e-18 87.8
MS.gene058371.t1 AT2G16120 28.311 219 137 3 27 245 30 228 2.37e-18 87.4
MS.gene058371.t1 AT2G16120 31.788 151 102 1 244 393 295 445 2.43e-15 78.2
MS.gene058371.t1 AT1G79820 25.382 327 212 9 95 411 108 412 2.49e-18 87.0
MS.gene058371.t1 AT1G05030 23.206 418 239 11 29 393 85 473 5.36e-18 86.7
MS.gene058371.t1 AT3G05155 23.349 424 247 12 16 391 20 413 7.77e-18 85.9
MS.gene058371.t1 AT2G35740 28.700 223 138 5 21 242 24 226 1.50e-17 85.5
MS.gene058371.t1 AT3G05400 23.239 426 227 12 16 391 19 394 1.98e-17 84.3
MS.gene058371.t1 AT1G05030 23.161 367 221 8 79 393 64 421 2.40e-17 84.3
MS.gene058371.t1 AT3G51490 25.600 250 165 7 23 271 4 233 2.56e-17 84.7
MS.gene058371.t1 AT3G51490 25.490 255 169 7 23 276 4 238 2.56e-17 84.7
MS.gene058371.t1 AT1G30220 29.694 229 137 7 20 246 25 231 3.70e-17 84.3
MS.gene058371.t1 AT4G16480 28.837 215 134 3 20 234 24 219 4.10e-17 84.0
MS.gene058371.t1 AT4G16480 28.837 215 134 3 20 234 24 219 4.10e-17 84.0
MS.gene058371.t1 AT4G16480 28.837 215 134 3 20 234 24 219 4.10e-17 84.0
MS.gene058371.t1 AT1G79820 23.607 377 204 12 95 411 108 460 1.12e-16 82.4
MS.gene058371.t1 AT1G79820 23.607 377 204 12 95 411 108 460 1.12e-16 82.4
MS.gene058371.t1 AT3G51490 27.807 187 132 3 91 276 4 188 1.49e-16 82.4
MS.gene058371.t1 AT2G48020 23.371 445 251 8 2 391 7 416 3.11e-16 80.9
MS.gene058371.t1 AT2G48020 23.371 445 251 8 2 391 7 416 3.11e-16 80.9
MS.gene058371.t1 AT5G59250 28.692 237 140 5 23 248 98 316 3.40e-16 81.3
MS.gene058371.t1 AT4G04750 23.202 431 242 11 16 391 30 426 7.65e-16 79.7
MS.gene058371.t1 AT4G04750 23.202 431 242 11 16 391 30 426 7.65e-16 79.7
MS.gene058371.t1 AT4G04750 22.992 361 212 7 85 391 122 470 9.11e-16 79.7
MS.gene058371.t1 AT5G18840 24.598 435 231 12 16 391 37 433 1.62e-15 79.0
MS.gene058371.t1 AT1G79820 27.143 280 172 9 136 405 87 344 6.29e-15 76.6
MS.gene058371.t1 AT3G05155 25.641 234 144 7 16 248 20 224 1.32e-14 75.1
MS.gene058371.t1 AT1G79820 23.276 348 187 11 95 382 108 435 3.49e-14 74.7
MS.gene058371.t1 AT5G17010 23.529 442 235 16 7 397 10 399 8.27e-14 73.6
MS.gene058371.t1 AT1G54730 22.892 415 215 9 29 391 38 399 9.44e-14 73.2
MS.gene058371.t1 AT1G54730 22.892 415 215 9 29 391 38 399 1.22e-13 72.8
MS.gene058371.t1 AT5G27360 22.302 417 238 11 6 369 18 401 6.80e-13 70.5
MS.gene058371.t1 AT1G54730 23.773 387 211 9 29 363 38 392 8.23e-13 70.1
MS.gene058371.t1 AT1G54730 23.773 387 211 9 29 363 38 392 8.23e-13 70.1
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.81e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.81e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.81e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.95e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.95e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.95e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.95e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.95e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.95e-12 69.3
MS.gene058371.t1 AT4G35300 25.781 256 183 6 91 344 54 304 2.95e-12 69.3
MS.gene058371.t1 AT1G20840 27.059 170 121 3 103 271 64 231 4.87e-12 68.6
MS.gene058371.t1 AT1G20840 27.059 170 121 3 103 271 64 231 4.87e-12 68.6
MS.gene058371.t1 AT1G08920 19.765 425 253 10 18 388 27 417 5.09e-12 67.8
MS.gene058371.t1 AT1G08920 19.765 425 253 10 18 388 27 417 6.01e-12 67.8
MS.gene058371.t1 AT4G04760 22.791 430 246 12 16 391 25 422 3.03e-11 65.5

Find 85 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATGCTGTTTGGTGTTTC+TGG 0.080373 3.2:-2481350 None:intergenic
AACATCATGTGTACCTCTTA+TGG 0.246160 3.2:-2481417 None:intergenic
GCCATTTCTGATAGATATAA+TGG 0.247787 3.2:-2481146 None:intergenic
CCTCTTCCATTGCTTGGAAT+TGG 0.248254 3.2:-2479088 None:intergenic
ATACTTGGTCGTGTTCTTCT+TGG 0.258509 3.2:+2480340 MS.gene058371:CDS
AAATAGGATTGGAGCATAAA+AGG 0.275402 3.2:-2481594 None:intergenic
GGTTATGATATAGGAATTTC+AGG 0.277570 3.2:+2479181 MS.gene058371:CDS
TGGAATTGGCTTTGCTAATC+AGG 0.280534 3.2:+2480366 MS.gene058371:CDS
GGTGGTGCTGCATTCCTTAT+TGG 0.287192 3.2:+2480277 MS.gene058371:CDS
TTGCTCAATTGGAACATTCT+TGG 0.300336 3.2:-2482107 None:intergenic
CTCTTCCATTGCTTGGAATT+GGG 0.301317 3.2:-2479087 None:intergenic
ATTATCTTCGGTTATGATAT+AGG 0.305759 3.2:+2479172 MS.gene058371:CDS
ACCCTATCCATTTGCTCAAT+TGG 0.305882 3.2:-2482118 None:intergenic
CTTGTTGTCTTGTTTCATCT+TGG 0.317999 3.2:-2480119 None:intergenic
GTTCTTCTTGGAGTTGGAAT+TGG 0.324453 3.2:+2480352 MS.gene058371:CDS
TATTGTGATTCTCTCTTGTA+TGG 0.347026 3.2:+2479132 MS.gene058371:CDS
TCTTGTATGGTGGCTGCCAC+TGG 0.347170 3.2:+2479145 MS.gene058371:CDS
AAGCAAAGAAAGATGCTAAA+AGG 0.350210 3.2:-2480210 None:intergenic
TTGATTGCTCCTCTATATCT+TGG 0.356231 3.2:-2481173 None:intergenic
TTCATCTTGGTGTATACATC+TGG 0.359272 3.2:-2480106 None:intergenic
TTCTTCTCACAAATTCTAAT+AGG 0.359757 3.2:+2481761 MS.gene058371:CDS
TTGATATGCATTTATGTTGC+CGG 0.361579 3.2:+2481854 MS.gene058371:CDS
CACCAAGAGCTGCTCCAATA+AGG 0.370888 3.2:-2480291 None:intergenic
CCAGCTACAATCCTCACTTT+AGG 0.378444 3.2:+2481314 MS.gene058371:CDS
TTCCTTATTGGAGCAGCTCT+TGG 0.384601 3.2:+2480289 MS.gene058371:CDS
TTGAGCAAATGGATAGGGTT+TGG 0.386241 3.2:+2482122 MS.gene058371:CDS
TTGCCGGATTTGCTTGGTCA+TGG 0.394117 3.2:+2481870 MS.gene058371:CDS
TTGTATCCTCTTCCATTGCT+TGG 0.396317 3.2:-2479094 None:intergenic
TTATGCTGTTTGGTGTTTCT+GGG 0.396973 3.2:-2481349 None:intergenic
GCACCACCTACAAGAATTGA+TGG 0.406112 3.2:-2480262 None:intergenic
TGCCGGATTTGCTTGGTCAT+GGG 0.407730 3.2:+2481871 MS.gene058371:CDS
TCAGCAAATTTAATCAACTT+TGG 0.416918 3.2:+2481233 MS.gene058371:CDS
GAATGTTCCAATTGAGCAAA+TGG 0.420157 3.2:+2482111 MS.gene058371:CDS
AGAAAAGATCAAAGACGGTT+GGG 0.422002 3.2:+2481259 MS.gene058371:CDS
GCAGTTATGGTAGGAATTGT+AGG 0.423411 3.2:+2481656 MS.gene058371:CDS
CCCATTATATCTATCAGAAA+TGG 0.423439 3.2:+2481145 MS.gene058371:CDS
TCATCAATCACAAGAGCCTT+TGG 0.425277 3.2:+2480232 MS.gene058371:CDS
GGTCGTGTTCTTCTTGGAGT+TGG 0.425536 3.2:+2480346 MS.gene058371:CDS
GCCACTGGAGGCATTATCTT+CGG 0.431033 3.2:+2479160 MS.gene058371:CDS
AATTCTAATAGGAAGTATAA+TGG 0.436111 3.2:+2481772 MS.gene058371:CDS
CTTATTGGAGCAGCTCTTGG+TGG 0.464561 3.2:+2480292 MS.gene058371:CDS
CTAGGAACCAACCATCCTAA+TGG 0.475289 3.2:-2481896 None:intergenic
CCATTTCTGATAGATATAAT+GGG 0.482018 3.2:-2481145 None:intergenic
GCCGGATTTGCTTGGTCATG+GGG 0.494733 3.2:+2481872 MS.gene058371:CDS
CACCCATTCCAACACATAGT+TGG 0.496838 3.2:-2481205 None:intergenic
TCCAATTGAGCAAATGGATA+GGG 0.497217 3.2:+2482117 MS.gene058371:CDS
ATTGTTGGAGACAAGATTGA+AGG 0.501127 3.2:+2482169 MS.gene058371:CDS
TGCAGGTGGTGTAACATCAA+TGG 0.504221 3.2:+2480060 MS.gene058371:intron
ATACAAGAGAGAATCACAAT+AGG 0.504849 3.2:-2479130 None:intergenic
GTGATGAAGTGAATGTTGTT+AGG 0.505701 3.2:-2480174 None:intergenic
CTTCCAACTATGTGTTGGAA+TGG 0.506735 3.2:+2481202 MS.gene058371:CDS
TTAATGCTGCAATCCATAAG+AGG 0.508403 3.2:+2481404 MS.gene058371:CDS
TTCCAACTATGTGTTGGAAT+GGG 0.509328 3.2:+2481203 MS.gene058371:CDS
AGTATAATGGCAGCACAACT+TGG 0.520104 3.2:+2481785 MS.gene058371:CDS
ACTTCATCACTATATATAGC+TGG 0.520261 3.2:+2480187 MS.gene058371:CDS
ATGGCACTTCCAAGATATAG+AGG 0.524996 3.2:+2481164 MS.gene058371:CDS
AATATATACATGCTAATACT+TGG 0.530434 3.2:+2480325 MS.gene058371:CDS
GCAGCACAACTTGGTGATCA+TGG 0.536187 3.2:+2481794 MS.gene058371:CDS
CCTAAAGTGAGGATTGTAGC+TGG 0.537334 3.2:-2481314 None:intergenic
GAGCTCCCAATTCCAAGCAA+TGG 0.539552 3.2:+2479082 MS.gene058371:CDS
CAGAAAAGATCAAAGACGGT+TGG 0.543560 3.2:+2481258 MS.gene058371:CDS
CGCAAACCATCAATTCTTGT+AGG 0.548548 3.2:+2480256 MS.gene058371:CDS
AATGGCTTCCAACTATGTGT+TGG 0.553875 3.2:+2481197 MS.gene058371:CDS
TGTAGCTGGAACTGCTGCCA+TGG 0.558668 3.2:-2481300 None:intergenic
AATTGATGGTTTGCGACCAA+AGG 0.563264 3.2:-2480248 None:intergenic
GAAAAGATCAAAGACGGTTG+GGG 0.563993 3.2:+2481260 MS.gene058371:CDS
TTTATGTTGCCGGATTTGCT+TGG 0.566712 3.2:+2481864 MS.gene058371:CDS
AGCACTTTCGCCTAATCCAA+TGG 0.569123 3.2:-2481621 None:intergenic
AAGTGAATGTTGTTAGGAGT+TGG 0.571646 3.2:-2480168 None:intergenic
TGTGATTCTCTCTTGTATGG+TGG 0.579802 3.2:+2479135 MS.gene058371:CDS
TTCCAATTGAGCAAATGGAT+AGG 0.581303 3.2:+2482116 MS.gene058371:CDS
AGCAATGGAAGAGGATACAA+TGG 0.586289 3.2:+2479097 MS.gene058371:CDS
TGCAACTGTAATACTTTGCG+CGG 0.587190 3.2:-2481948 None:intergenic
CCAATTCCAAGCAATGGAAG+AGG 0.588796 3.2:+2479088 MS.gene058371:CDS
AGATCAAAGACGGTTGGGGA+TGG 0.591219 3.2:+2481264 MS.gene058371:CDS
TGTATGGTGGCTGCCACTGG+AGG 0.591273 3.2:+2479148 MS.gene058371:CDS
GGTACAGAAAAGATCAAAGA+CGG 0.591721 3.2:+2481254 MS.gene058371:CDS
ATGCTCATAGTCGATAAACT+AGG 0.596406 3.2:+2481701 MS.gene058371:CDS
CCGGATTTGCTTGGTCATGG+GGG 0.615253 3.2:+2481873 MS.gene058371:CDS
ATGGCGAATTTCTCTAGCCA+TGG 0.615608 3.2:+2481283 MS.gene058371:CDS
AAACCATCAATTCTTGTAGG+TGG 0.619483 3.2:+2480259 MS.gene058371:CDS
GCGGCTGATCTAATCTCCAA+TGG 0.626357 3.2:-2481929 None:intergenic
TATAGAGGAGCAATCAACAA+TGG 0.645205 3.2:+2481179 MS.gene058371:CDS
ACCGAAGATAATGCCTCCAG+TGG 0.655294 3.2:-2479161 None:intergenic
GATTGAAGGCAAACAAACTG+TGG 0.667334 3.2:+2482183 MS.gene058371:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATGTAAGTTAATATA+TGG + chr3.2:2480491-2480510 MS.gene058371:intron 10.0%
!! TATCTATAATAACTATATAA+GGG - chr3.2:2479511-2479530 None:intergenic 10.0%
!! AATATTGTATGAAAATTAAG+TGG - chr3.2:2480750-2480769 None:intergenic 15.0%
!! ATATTGTATGAAAATTAAGT+GGG - chr3.2:2480749-2480768 None:intergenic 15.0%
!! ATGATATCATCTTAAAATTT+GGG + chr3.2:2480876-2480895 MS.gene058371:intron 15.0%
!! CTTTATAAGATATTCTTAAA+TGG - chr3.2:2481500-2481519 None:intergenic 15.0%
!! GTATCTATAATAACTATATA+AGG - chr3.2:2479512-2479531 None:intergenic 15.0%
!! TATGATATCATCTTAAAATT+TGG + chr3.2:2480875-2480894 MS.gene058371:intron 15.0%
!!! AAATCTACAGTTTTTTTTAT+AGG - chr3.2:2479672-2479691 None:intergenic 15.0%
!!! AAATTTTAAGATGATATCAT+AGG - chr3.2:2480876-2480895 None:intergenic 15.0%
!!! AATGAATATTTTTATCTAGT+CGG + chr3.2:2480585-2480604 MS.gene058371:intron 15.0%
!!! ATTTAAAGATTATTTGGTTT+TGG - chr3.2:2479843-2479862 None:intergenic 15.0%
!!! GACTTCAAATTTAAAATTTA+AGG - chr3.2:2479812-2479831 None:intergenic 15.0%
!!! TTGTACTATCTTTTAAAAAA+AGG + chr3.2:2479308-2479327 MS.gene058371:intron 15.0%
!!! TTTTTTTGGAAAAAAATTGT+TGG + chr3.2:2482154-2482173 MS.gene058371:CDS 15.0%
!! AAAATTCGTTGAAATTACAT+GGG + chr3.2:2479777-2479796 MS.gene058371:intron 20.0%
!! AATATATACATGCTAATACT+TGG + chr3.2:2480325-2480344 MS.gene058371:CDS 20.0%
!! ACATTAACATAAACTTTAGA+TGG + chr3.2:2481092-2481111 MS.gene058371:intron 20.0%
!! ACTATACAAAATAGATGATA+TGG + chr3.2:2479740-2479759 MS.gene058371:intron 20.0%
!! ATATAAGGGATCAAAAATAT+TGG - chr3.2:2479497-2479516 None:intergenic 20.0%
!! CAAAAAGAGAAAAAAATTGA+AGG - chr3.2:2480042-2480061 None:intergenic 20.0%
!! CACTAAAATTTCTAAATATG+TGG - chr3.2:2480462-2480481 None:intergenic 20.0%
!! CATTATTGTTCTTAAAAACA+TGG - chr3.2:2480411-2480430 None:intergenic 20.0%
!! CTCGTAATTTAAAGATTATT+TGG - chr3.2:2479849-2479868 None:intergenic 20.0%
!! GATGATTAAAAGTTCAAAAT+TGG - chr3.2:2480985-2481004 None:intergenic 20.0%
!! TATTAAGCTCTTTAATTCAT+TGG + chr3.2:2481047-2481066 MS.gene058371:intron 20.0%
!!! AAATCCAAAGTTTTTTTACA+TGG + chr3.2:2479873-2479892 MS.gene058371:intron 20.0%
!!! AATCCAAAGTTTTTTTACAT+GGG + chr3.2:2479874-2479893 MS.gene058371:intron 20.0%
!!! AATTCTAATAGGAAGTATAA+TGG + chr3.2:2481772-2481791 MS.gene058371:CDS 20.0%
!!! ACTTAAATCTTATTTGATTG+TGG - chr3.2:2479282-2479301 None:intergenic 20.0%
! AAAATAGATGATATGGTATG+AGG + chr3.2:2479747-2479766 MS.gene058371:intron 25.0%
! AAATAGATGATATGGTATGA+GGG + chr3.2:2479748-2479767 MS.gene058371:intron 25.0%
! AAATTCGTTGAAATTACATG+GGG + chr3.2:2479778-2479797 MS.gene058371:intron 25.0%
! AAGATTGTTATCGCAAAAAA+TGG - chr3.2:2479563-2479582 None:intergenic 25.0%
! ATAATGAGAAAGAGAGATAA+TGG + chr3.2:2480425-2480444 MS.gene058371:intron 25.0%
! ATTAAAAAGTGAAGTGTGTT+TGG - chr3.2:2480620-2480639 None:intergenic 25.0%
! ATTATCTTCGGTTATGATAT+AGG + chr3.2:2479172-2479191 MS.gene058371:CDS 25.0%
! CAAAATTCGTTGAAATTACA+TGG + chr3.2:2479776-2479795 MS.gene058371:intron 25.0%
! CCATTTCTGATAGATATAAT+GGG - chr3.2:2481148-2481167 None:intergenic 25.0%
! CTAATCCAATGGTTAAAAAT+AGG - chr3.2:2481613-2481632 None:intergenic 25.0%
! GAAAAGATAATGAAGTTGAA+TGG - chr3.2:2479218-2479237 None:intergenic 25.0%
! GTTCTTAAAAACATGGTAAT+TGG - chr3.2:2480404-2480423 None:intergenic 25.0%
! TATCCCATGTAAAAAAACTT+TGG - chr3.2:2479880-2479899 None:intergenic 25.0%
! TCAGCAAATTTAATCAACTT+TGG + chr3.2:2481233-2481252 MS.gene058371:CDS 25.0%
! TGTATAGTCAAAATTTACGA+AGG - chr3.2:2479728-2479747 None:intergenic 25.0%
! TTAGACTATGATAAGTAAGA+CGG + chr3.2:2480641-2480660 MS.gene058371:intron 25.0%
! TTCTTCTCACAAATTCTAAT+AGG + chr3.2:2481761-2481780 MS.gene058371:CDS 25.0%
!! ATGTTATGTCATTTCAAGTA+TGG + chr3.2:2482016-2482035 MS.gene058371:intron 25.0%
!! CATGTAATTTCAACGAATTT+TGG - chr3.2:2479778-2479797 None:intergenic 25.0%
!! TCACTTATAAACTCATTTTC+AGG + chr3.2:2480948-2480967 MS.gene058371:intron 25.0%
!!! CAATTTTTTTCTCTTTTTGC+AGG + chr3.2:2480043-2480062 MS.gene058371:intron 25.0%
!!! CTATTTTTAACCATTGGATT+AGG + chr3.2:2481611-2481630 MS.gene058371:CDS 25.0%
!!! TATGGAACTTTCTTCTTTTT+TGG + chr3.2:2482034-2482053 MS.gene058371:intron 25.0%
!!! TTTGGAGAGAACATTTTTTT+TGG + chr3.2:2482140-2482159 MS.gene058371:CDS 25.0%
AAATAGGATTGGAGCATAAA+AGG - chr3.2:2481597-2481616 None:intergenic 30.0%
AAGCAAAGAAAGATGCTAAA+AGG - chr3.2:2480213-2480232 None:intergenic 30.0%
ACATGATACTTGCTTCAATA+AGG - chr3.2:2481460-2481479 None:intergenic 30.0%
ACTTCATCACTATATATAGC+TGG + chr3.2:2480187-2480206 MS.gene058371:CDS 30.0%
AGCTCTTTAATTCATTGGAT+TGG + chr3.2:2481052-2481071 MS.gene058371:intron 30.0%
ATACAAGAGAGAATCACAAT+AGG - chr3.2:2479133-2479152 None:intergenic 30.0%
CCAATGGTTAAAAATAGGAT+TGG - chr3.2:2481608-2481627 None:intergenic 30.0%
CCCATTATATCTATCAGAAA+TGG + chr3.2:2481145-2481164 MS.gene058371:CDS 30.0%
GCCATTTCTGATAGATATAA+TGG - chr3.2:2481149-2481168 None:intergenic 30.0%
GCTCTTTAATTCATTGGATT+GGG + chr3.2:2481053-2481072 MS.gene058371:intron 30.0%
GGAAAAAACTTCTCCAAAAA+TGG - chr3.2:2480088-2480107 None:intergenic 30.0%
GGATCTCTTAAAATTTGTGT+TGG + chr3.2:2480676-2480695 MS.gene058371:intron 30.0%
GGTTATGATATAGGAATTTC+AGG + chr3.2:2479181-2479200 MS.gene058371:CDS 30.0%
TAAATCAAAACTTGCCCAAA+TGG + chr3.2:2479898-2479917 MS.gene058371:intron 30.0%
TATTGTGATTCTCTCTTGTA+TGG + chr3.2:2479132-2479151 MS.gene058371:CDS 30.0%
TGATGTTCAACAAGAATTTG+AGG + chr3.2:2481433-2481452 MS.gene058371:intron 30.0%
TTGATATGCATTTATGTTGC+CGG + chr3.2:2481854-2481873 MS.gene058371:CDS 30.0%
! AAAAGTTTCTTTTCTTCTGC+AGG + chr3.2:2481118-2481137 MS.gene058371:intron 30.0%
!! ATATAGACCTCAACTTGTTA+TGG + chr3.2:2481523-2481542 MS.gene058371:intron 30.0%
!! GCATTAACTTAGCTTTTTGA+TGG - chr3.2:2481391-2481410 None:intergenic 30.0%
!! TTCACTTTTATCTGCAGTTA+TGG + chr3.2:2481643-2481662 MS.gene058371:CDS 30.0%
!!! CCAATCCTATTTTTAACCAT+TGG + chr3.2:2481605-2481624 MS.gene058371:CDS 30.0%
!!! TTTCTTCTTTTTTGGAGGTT+GGG + chr3.2:2482042-2482061 MS.gene058371:intron 30.0%
!!! TTTGATGGTTTTTGCTGTTT+TGG - chr3.2:2481376-2481395 None:intergenic 30.0%
!!! TTTTTTTCTCTTTTTGCAGG+TGG + chr3.2:2480046-2480065 MS.gene058371:intron 30.0%
AAACCATCAATTCTTGTAGG+TGG + chr3.2:2480259-2480278 MS.gene058371:CDS 35.0%
AACATCATGTGTACCTCTTA+TGG - chr3.2:2481420-2481439 None:intergenic 35.0%
AACTCTTCGACCTAATAGAT+CGG - chr3.2:2480547-2480566 None:intergenic 35.0%
AAGTGAATGTTGTTAGGAGT+TGG - chr3.2:2480171-2480190 None:intergenic 35.0%
ACATTCTTCTTCTCACAAGT+CGG - chr3.2:2480927-2480946 None:intergenic 35.0%
AGAAAAGATCAAAGACGGTT+GGG + chr3.2:2481259-2481278 MS.gene058371:CDS 35.0%
ATGCTCATAGTCGATAAACT+AGG + chr3.2:2481701-2481720 MS.gene058371:CDS 35.0%
ATTGGAACATTCTTGGTTTC+TGG - chr3.2:2482103-2482122 None:intergenic 35.0%
ATTGTTGGAGACAAGATTGA+AGG + chr3.2:2482169-2482188 MS.gene058371:CDS 35.0%
CCTGTGAATTGTTGGAAAAA+AGG - chr3.2:2481560-2481579 None:intergenic 35.0%
GAAAAAATGCTCCTAAAGTG+AGG - chr3.2:2481328-2481347 None:intergenic 35.0%
GAATGTTCCAATTGAGCAAA+TGG + chr3.2:2482111-2482130 MS.gene058371:CDS 35.0%
GGTACAGAAAAGATCAAAGA+CGG + chr3.2:2481254-2481273 MS.gene058371:CDS 35.0%
GTAAGACGGTGAAATATGAA+TGG + chr3.2:2480655-2480674 MS.gene058371:intron 35.0%
GTCAGTGTAAAACATGTTCA+TGG + chr3.2:2481010-2481029 MS.gene058371:intron 35.0%
GTCTTTACATCACTGTCATT+TGG + chr3.2:2479627-2479646 MS.gene058371:intron 35.0%
GTGATGAAGTGAATGTTGTT+AGG - chr3.2:2480177-2480196 None:intergenic 35.0%
TATAGAGGAGCAATCAACAA+TGG + chr3.2:2481179-2481198 MS.gene058371:CDS 35.0%
TATTAGGTCGAAGAGTTTCA+AGG + chr3.2:2480550-2480569 MS.gene058371:intron 35.0%
TCCAATGGAAAAATCTCACT+AGG - chr3.2:2481917-2481936 None:intergenic 35.0%
TCCAATTGAGCAAATGGATA+GGG + chr3.2:2482117-2482136 MS.gene058371:CDS 35.0%
TTAATGCTGCAATCCATAAG+AGG + chr3.2:2481404-2481423 MS.gene058371:CDS 35.0%
TTCCAACTATGTGTTGGAAT+GGG + chr3.2:2481203-2481222 MS.gene058371:CDS 35.0%
TTCCAATTGAGCAAATGGAT+AGG + chr3.2:2482116-2482135 MS.gene058371:CDS 35.0%
TTGATTGCTCCTCTATATCT+TGG - chr3.2:2481176-2481195 None:intergenic 35.0%
TTGCTCAATTGGAACATTCT+TGG - chr3.2:2482110-2482129 None:intergenic 35.0%
! CTTTTATCTGCAGTTATGGT+AGG + chr3.2:2481647-2481666 MS.gene058371:CDS 35.0%
! TCCTAGTGAGATTTTTCCAT+TGG + chr3.2:2481913-2481932 MS.gene058371:CDS 35.0%
! TGGATTGGGTACTATTATCT+TGG + chr3.2:2481067-2481086 MS.gene058371:intron 35.0%
! TTCATCTTGGTGTATACATC+TGG - chr3.2:2480109-2480128 None:intergenic 35.0%
!! ATTATGCTGTTTGGTGTTTC+TGG - chr3.2:2481353-2481372 None:intergenic 35.0%
!! CATTGATTCCTGTGAATTGT+TGG - chr3.2:2481568-2481587 None:intergenic 35.0%
!! CTGTTTTGGATTATGCTGTT+TGG - chr3.2:2481362-2481381 None:intergenic 35.0%
!! CTTGTTGTCTTGTTTCATCT+TGG - chr3.2:2480122-2480141 None:intergenic 35.0%
!! TTATGCTGTTTGGTGTTTCT+GGG - chr3.2:2481352-2481371 None:intergenic 35.0%
!!! AACATCAATGGTGCCATTTT+TGG + chr3.2:2480072-2480091 MS.gene058371:CDS 35.0%
!!! AGAGTTTTGTTCATATCAGG+TGG + chr3.2:2481728-2481747 MS.gene058371:CDS 35.0%
!!! CCTTTTTTCCAACAATTCAC+AGG + chr3.2:2481557-2481576 MS.gene058371:intron 35.0%
!!! CGAAGAGTTTTGTTCATATC+AGG + chr3.2:2481725-2481744 MS.gene058371:CDS 35.0%
!!! CTTTCTTCTTTTTTGGAGGT+TGG + chr3.2:2482041-2482060 MS.gene058371:intron 35.0%
!!! GGAACTTTCTTCTTTTTTGG+AGG + chr3.2:2482037-2482056 MS.gene058371:intron 35.0%
AAAACTTGCCCAAATGGCAT+AGG + chr3.2:2479904-2479923 MS.gene058371:intron 40.0%
AAACTTGCCCAAATGGCATA+GGG + chr3.2:2479905-2479924 MS.gene058371:intron 40.0%
AATGGCTTCCAACTATGTGT+TGG + chr3.2:2481197-2481216 MS.gene058371:CDS 40.0%
ACCCTATCCATTTGCTCAAT+TGG - chr3.2:2482121-2482140 None:intergenic 40.0%
ACGTCACACTCTAAATGTCT+GGG - chr3.2:2480808-2480827 None:intergenic 40.0%
AGCAATGGAAGAGGATACAA+TGG + chr3.2:2479097-2479116 MS.gene058371:CDS 40.0%
AGTATAATGGCAGCACAACT+TGG + chr3.2:2481785-2481804 MS.gene058371:CDS 40.0%
ATACTTGGTCGTGTTCTTCT+TGG + chr3.2:2480340-2480359 MS.gene058371:CDS 40.0%
ATGGCACTTCCAAGATATAG+AGG + chr3.2:2481164-2481183 MS.gene058371:CDS 40.0%
CAGAAAAGATCAAAGACGGT+TGG + chr3.2:2481258-2481277 MS.gene058371:CDS 40.0%
CGCAAACCATCAATTCTTGT+AGG + chr3.2:2480256-2480275 MS.gene058371:CDS 40.0%
CTCTTCCATTGCTTGGAATT+GGG - chr3.2:2479090-2479109 None:intergenic 40.0%
CTTCCAACTATGTGTTGGAA+TGG + chr3.2:2481202-2481221 MS.gene058371:CDS 40.0%
GAAAAGATCAAAGACGGTTG+GGG + chr3.2:2481260-2481279 MS.gene058371:CDS 40.0%
GATTGAAGGCAAACAAACTG+TGG + chr3.2:2482183-2482202 MS.gene058371:CDS 40.0%
GCAGTTATGGTAGGAATTGT+AGG + chr3.2:2481656-2481675 MS.gene058371:CDS 40.0%
GCTATTGCCATAACAAGTTG+AGG - chr3.2:2481533-2481552 None:intergenic 40.0%
GTTCTTCTTGGAGTTGGAAT+TGG + chr3.2:2480352-2480371 MS.gene058371:CDS 40.0%
TAGGACAAGACCGATCTATT+AGG + chr3.2:2480534-2480553 MS.gene058371:intron 40.0%
TCATCAATCACAAGAGCCTT+TGG + chr3.2:2480232-2480251 MS.gene058371:CDS 40.0%
TGCAACTGTAATACTTTGCG+CGG - chr3.2:2481951-2481970 None:intergenic 40.0%
TGTGATTCTCTCTTGTATGG+TGG + chr3.2:2479135-2479154 MS.gene058371:CDS 40.0%
TTGAGCAAATGGATAGGGTT+TGG + chr3.2:2482122-2482141 MS.gene058371:CDS 40.0%
TTGTATCCTCTTCCATTGCT+TGG - chr3.2:2479097-2479116 None:intergenic 40.0%
! AATTGATGGTTTGCGACCAA+AGG - chr3.2:2480251-2480270 None:intergenic 40.0%
! GAGAGATAATGGCACTCTTT+AGG + chr3.2:2480436-2480455 MS.gene058371:intron 40.0%
! GTGTTTACCCTATGCCATTT+GGG - chr3.2:2479915-2479934 None:intergenic 40.0%
! TTTATGTTGCCGGATTTGCT+TGG + chr3.2:2481864-2481883 MS.gene058371:CDS 40.0%
!! AAATCGACTTGTAGAGGTGA+GGG + chr3.2:2480717-2480736 MS.gene058371:intron 40.0%
!! TCTCACAAGTCGGTTTTGTA+TGG - chr3.2:2480917-2480936 None:intergenic 40.0%
!! TGGAATTGGCTTTGCTAATC+AGG + chr3.2:2480366-2480385 MS.gene058371:CDS 40.0%
ACTCTAAATGTCTGGGCATG+AGG - chr3.2:2480801-2480820 None:intergenic 45.0%
AGATACGAGTAGCGTACAAG+TGG + chr3.2:2479526-2479545 MS.gene058371:intron 45.0%
AGCACTTTCGCCTAATCCAA+TGG - chr3.2:2481624-2481643 None:intergenic 45.0%
ATGGCGAATTTCTCTAGCCA+TGG + chr3.2:2481283-2481302 MS.gene058371:CDS 45.0%
CACCCATTCCAACACATAGT+TGG - chr3.2:2481208-2481227 None:intergenic 45.0%
CACGTCACACTCTAAATGTC+TGG - chr3.2:2480809-2480828 None:intergenic 45.0%
CCAATTCCAAGCAATGGAAG+AGG + chr3.2:2479088-2479107 MS.gene058371:CDS 45.0%
CCAGCTACAATCCTCACTTT+AGG + chr3.2:2481314-2481333 MS.gene058371:CDS 45.0%
CCTAAAGTGAGGATTGTAGC+TGG - chr3.2:2481317-2481336 None:intergenic 45.0%
CCTCTTCCATTGCTTGGAAT+TGG - chr3.2:2479091-2479110 None:intergenic 45.0%
CGTGTTTACCCTATGCCATT+TGG - chr3.2:2479916-2479935 None:intergenic 45.0%
CTAGGAACCAACCATCCTAA+TGG - chr3.2:2481899-2481918 None:intergenic 45.0%
CTCTAAATGTCTGGGCATGA+GGG - chr3.2:2480800-2480819 None:intergenic 45.0%
GCACCACCTACAAGAATTGA+TGG - chr3.2:2480265-2480284 None:intergenic 45.0%
GTCCTAGCAGTGTGTCATAA+AGG - chr3.2:2480520-2480539 None:intergenic 45.0%
TCTAAATGTCTGGGCATGAG+GGG - chr3.2:2480799-2480818 None:intergenic 45.0%
TGCAGGTGGTGTAACATCAA+TGG + chr3.2:2480060-2480079 MS.gene058371:intron 45.0%
TGCCTTTATGACACACTGCT+AGG + chr3.2:2480515-2480534 MS.gene058371:intron 45.0%
TTCCTTATTGGAGCAGCTCT+TGG + chr3.2:2480289-2480308 MS.gene058371:CDS 45.0%
! CATTTAGAGTGTGACGTGAG+TGG + chr3.2:2480811-2480830 MS.gene058371:intron 45.0%
! CCTCTACAAGTCGATTTCAC+AGG - chr3.2:2480714-2480733 None:intergenic 45.0%
!! CCTGTGAAATCGACTTGTAG+AGG + chr3.2:2480711-2480730 MS.gene058371:intron 45.0%
!! GAAATCGACTTGTAGAGGTG+AGG + chr3.2:2480716-2480735 MS.gene058371:intron 45.0%
!!! CTTCTTTTTTGGAGGTTGGG+TGG + chr3.2:2482045-2482064 MS.gene058371:intron 45.0%
ACCGAAGATAATGCCTCCAG+TGG - chr3.2:2479164-2479183 None:intergenic 50.0%
AGATCAAAGACGGTTGGGGA+TGG + chr3.2:2481264-2481283 MS.gene058371:CDS 50.0%
CACCAAGAGCTGCTCCAATA+AGG - chr3.2:2480294-2480313 None:intergenic 50.0%
CTAAATGTCTGGGCATGAGG+GGG - chr3.2:2480798-2480817 None:intergenic 50.0%
CTTATTGGAGCAGCTCTTGG+TGG + chr3.2:2480292-2480311 MS.gene058371:CDS 50.0%
GAGCTCCCAATTCCAAGCAA+TGG + chr3.2:2479082-2479101 MS.gene058371:CDS 50.0%
GCGGCTGATCTAATCTCCAA+TGG - chr3.2:2481932-2481951 None:intergenic 50.0%
GGTCGTGTTCTTCTTGGAGT+TGG + chr3.2:2480346-2480365 MS.gene058371:CDS 50.0%
! GCAGCACAACTTGGTGATCA+TGG + chr3.2:2481794-2481813 MS.gene058371:CDS 50.0%
! TGCCGGATTTGCTTGGTCAT+GGG + chr3.2:2481871-2481890 MS.gene058371:CDS 50.0%
! TTGCCGGATTTGCTTGGTCA+TGG + chr3.2:2481870-2481889 MS.gene058371:CDS 50.0%
!! GCCACTGGAGGCATTATCTT+CGG + chr3.2:2479160-2479179 MS.gene058371:CDS 50.0%
!! GGTGGTGCTGCATTCCTTAT+TGG + chr3.2:2480277-2480296 MS.gene058371:CDS 50.0%
ATGGGGGCCATTAGGATGGT+TGG + chr3.2:2481889-2481908 MS.gene058371:CDS 55.0%
CCCCCATGACCAAGCAAATC+CGG - chr3.2:2481876-2481895 None:intergenic 55.0%
TCTTGTATGGTGGCTGCCAC+TGG + chr3.2:2479145-2479164 MS.gene058371:CDS 55.0%
TGTAGCTGGAACTGCTGCCA+TGG - chr3.2:2481303-2481322 None:intergenic 55.0%
! CCGGATTTGCTTGGTCATGG+GGG + chr3.2:2481873-2481892 MS.gene058371:CDS 55.0%
! GCCGGATTTGCTTGGTCATG+GGG + chr3.2:2481872-2481891 MS.gene058371:CDS 55.0%
GCTTGGTCATGGGGGCCATT+AGG + chr3.2:2481881-2481900 MS.gene058371:CDS 60.0%
GGTCATGGGGGCCATTAGGA+TGG + chr3.2:2481885-2481904 MS.gene058371:CDS 60.0%
TGACGTGAGTGGCCCGATAG+CGG + chr3.2:2480822-2480841 MS.gene058371:intron 60.0%
TGAGCTACCCAGCCCGCTAT+CGG - chr3.2:2480838-2480857 None:intergenic 60.0%
TGTATGGTGGCTGCCACTGG+AGG + chr3.2:2479148-2479167 MS.gene058371:CDS 60.0%
!! TAGCGGGCTGGGTAGCTCAA+CGG + chr3.2:2480839-2480858 MS.gene058371:intron 60.0%
GACGTGAGTGGCCCGATAGC+GGG + chr3.2:2480823-2480842 MS.gene058371:intron 65.0%
GAGCTACCCAGCCCGCTATC+GGG - chr3.2:2480837-2480856 None:intergenic 65.0%
!! GAGTGGCCCGATAGCGGGCT+GGG + chr3.2:2480828-2480847 MS.gene058371:intron 70.0%
!! TGAGTGGCCCGATAGCGGGC+TGG + chr3.2:2480827-2480846 MS.gene058371:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 2479070 2482213 2479070 ID=MS.gene058371
chr3.2 mRNA 2479070 2482213 2479070 ID=MS.gene058371.t1;Parent=MS.gene058371
chr3.2 exon 2479070 2479202 2479070 ID=MS.gene058371.t1.exon1;Parent=MS.gene058371.t1
chr3.2 CDS 2479070 2479202 2479070 ID=cds.MS.gene058371.t1;Parent=MS.gene058371.t1
chr3.2 exon 2480065 2480387 2480065 ID=MS.gene058371.t1.exon2;Parent=MS.gene058371.t1
chr3.2 CDS 2480065 2480387 2480065 ID=cds.MS.gene058371.t1;Parent=MS.gene058371.t1
chr3.2 exon 2481140 2481425 2481140 ID=MS.gene058371.t1.exon3;Parent=MS.gene058371.t1
chr3.2 CDS 2481140 2481425 2481140 ID=cds.MS.gene058371.t1;Parent=MS.gene058371.t1
chr3.2 exon 2481579 2482013 2481579 ID=MS.gene058371.t1.exon4;Parent=MS.gene058371.t1
chr3.2 CDS 2481579 2482013 2481579 ID=cds.MS.gene058371.t1;Parent=MS.gene058371.t1
chr3.2 exon 2482104 2482213 2482104 ID=MS.gene058371.t1.exon5;Parent=MS.gene058371.t1
chr3.2 CDS 2482104 2482213 2482104 ID=cds.MS.gene058371.t1;Parent=MS.gene058371.t1
Gene Sequence

>MS.gene058371

ATGGCAGTAGTAGAGCTCCCAATTCCAAGCAATGGAAGAGGATACAATGGAAAGATGACTCCTATTGTGATTCTCTCTTGTATGGTGGCTGCCACTGGAGGCATTATCTTCGGTTATGATATAGGAATTTCAGGTCAATCTCATACCATTCAACTTCATTATCTTTTCTTACAATTATTAAATCACACTTTGCTTTTTGTGAATACACACCACAATCAAATAAGATTTAAGTGATATTTTGTACTATCTTTTAAAAAAAGGTGATATTTGTACTTTTTTTAAACTAATATAGTTGAGTTATTTCTATTATAATGAGATTTAACATATTATTTTAGTTAAAATTTTAAATAAAATTATAAAAATTTAAAATTATAATTACTATACTTTAAATGAAAGATATAATTAGAAGAATGAAAAGATCAGTCCAATATTTTTGATCCCTTATATAGTTATTATAGATACGAGTAGCGTACAAGTGGATAATTTTTGTCCATTTTTTGCGATAACAATCTTGAAAATTACGAAATGTTATGCGATTATTTAAAAAAGATTAAATTGTCTTTACATCACTGTCATTTGGACGAATTTTGATTTATCTTCCTATAAAAAAAACTGTAGATTTCAATCTTATAATTTAAAGATTTTTTATTTTGATCCTTCGTAAATTTTGACTATACAAAATAGATGATATGGTATGAGGGTAAACCAAAATTCGTTGAAATTACATGGGGTGAAAATACCTTAAATTTTAAATTTGAAGTCATGAAAGTCCAAAACCAAATAATCTTTAAATTACGAGTTTGAAATCCAAAGTTTTTTTACATGGGATAAATCAAAACTTGCCCAAATGGCATAGGGTAAACACGATTTAACTAAAAAAAATGATATTTGATTGAATAAAGATAGATGAAATTGTAAATAAAAAGAAAAAATAAATAAAAGAAAAAATGAATACATCAACACTTAGAACCTTCAATTTTTTTCTCTTTTTGCAGGTGGTGTAACATCAATGGTGCCATTTTTGGAGAAGTTTTTTCCAGATGTATACACCAAGATGAAACAAGACAACAAGATAAGCAATTACTGCAAATTTGATAGCCAACTCCTAACAACATTCACTTCATCACTATATATAGCTGGCCTTTTAGCATCTTTCTTTGCTTCATCAATCACAAGAGCCTTTGGTCGCAAACCATCAATTCTTGTAGGTGGTGCTGCATTCCTTATTGGAGCAGCTCTTGGTGGTGCTGCACTTAATATATACATGCTAATACTTGGTCGTGTTCTTCTTGGAGTTGGAATTGGCTTTGCTAATCAGGTATAATATTTCTCCAATTACCATGTTTTTAAGAACAATAATGAGAAAGAGAGATAATGGCACTCTTTAGGCCACATATTTAGAAATTTTAGTGATAGTGACATAAATATGTAAGTTAATATATGGTTGCCTTTATGACACACTGCTAGGACAAGACCGATCTATTAGGTCGAAGAGTTTCAAGGCTTAAGTATTACAATGAATATTTTTATCTAGTCGGTGTAAAACTCCAAACACACTTCACTTTTTAATTTTAGACTATGATAAGTAAGACGGTGAAATATGAATGGATCTCTTAAAATTTGTGTTGGATCTAACTTAAGCCTGTGAAATCGACTTGTAGAGGTGAGGGATGTTTCCCACTTAATTTTCATACAATATTTCATCAAATGTCGAACTTCTCAAAACCCCCTCATGCCCAGACATTTAGAGTGTGACGTGAGTGGCCCGATAGCGGGCTGGGTAGCTCAACGGATTTCGAATAACCTATGATATCATCTTAAAATTTGGGTTGAGTCTAACTCAACCATACAAAACCGACTTGTGAGAAGAAGAATGTTTCACTTATAAACTCATTTTCAGGTAATATCTCATCCAATTTTGAACTTTTAATCATCATTATGTCAGTGTAAAACATGTTCATGGAGTGAACGTATAGTTATTAAGCTCTTTAATTCATTGGATTGGGTACTATTATCTTGGTAACATTAACATAAACTTTAGATGGATCAAAAGTTTCTTTTCTTCTGCAGGCAGTCCCATTATATCTATCAGAAATGGCACTTCCAAGATATAGAGGAGCAATCAACAATGGCTTCCAACTATGTGTTGGAATGGGTGTTCTATCAGCAAATTTAATCAACTTTGGTACAGAAAAGATCAAAGACGGTTGGGGATGGCGAATTTCTCTAGCCATGGCAGCAGTTCCAGCTACAATCCTCACTTTAGGAGCATTTTTTCTCCCAGAAACACCAAACAGCATAATCCAAAACAGCAAAAACCATCAAAAAGCTAAGTTAATGCTGCAATCCATAAGAGGTACACATGATGTTCAACAAGAATTTGAGGACCTTATTGAAGCAAGTATCATGTCAAATTCTATCAAACATCCATTTAAGAATATCTTATAAAGAAAATATAGACCTCAACTTGTTATGGCAATAGCTATACCTTTTTTCCAACAATTCACAGGAATCAATGTCATTTCCTTTTATGCTCCAATCCTATTTTTAACCATTGGATTAGGCGAAAGTGCTTCACTTTTATCTGCAGTTATGGTAGGAATTGTAGGCACTACTTCAACATTCATATCAATGCTCATAGTCGATAAACTAGGTCGAAGAGTTTTGTTCATATCAGGTGGAATTCAAATGTTCTTCTCACAAATTCTAATAGGAAGTATAATGGCAGCACAACTTGGTGATCATGGTGAAATAAGCAAGAAATATGCATATTTGATTCTAGTTTTGATATGCATTTATGTTGCCGGATTTGCTTGGTCATGGGGGCCATTAGGATGGTTGGTTCCTAGTGAGATTTTTCCATTGGAGATTAGATCAGCCGCGCAAAGTATTACAGTTGCAGTGAACTTTCTGTTTACTTTCATTGTTGCTCAAACTTTTCTTAGTATGTTATGTCATTTCAAGTATGGAACTTTCTTCTTTTTTGGAGGTTGGGTGGTTATGATGACAGTGTTTGTTTATTTTCTGTTACCAGAAACCAAGAATGTTCCAATTGAGCAAATGGATAGGGTTTGGAGAGAACATTTTTTTTGGAAAAAAATTGTTGGAGACAAGATTGAAGGCAAACAAACTGTGGTGCCTTAA

Protein sequence

>MS.gene058371.t1

MAVVELPIPSNGRGYNGKMTPIVILSCMVAATGGIIFGYDIGISGGVTSMVPFLEKFFPDVYTKMKQDNKISNYCKFDSQLLTTFTSSLYIAGLLASFFASSITRAFGRKPSILVGGAAFLIGAALGGAALNIYMLILGRVLLGVGIGFANQAVPLYLSEMALPRYRGAINNGFQLCVGMGVLSANLINFGTEKIKDGWGWRISLAMAAVPATILTLGAFFLPETPNSIIQNSKNHQKAKLMLQSIRGINVISFYAPILFLTIGLGESASLLSAVMVGIVGTTSTFISMLIVDKLGRRVLFISGGIQMFFSQILIGSIMAAQLGDHGEISKKYAYLILVLICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVAVNFLFTFIVAQTFLKTKNVPIEQMDRVWREHFFWKKIVGDKIEGKQTVVP