Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79061.t1 | RHN81411.1 | 62.9 | 758 | 160 | 2 | 13 | 685 | 35 | 756 | 1.30E-268 | 935.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79061.t1 | Q9SY66 | 50.1 | 501 | 242 | 5 | 73 | 572 | 60 | 553 | 2.3e-141 | 504.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79061.t1 | A0A396JX52 | 62.9 | 758 | 160 | 2 | 13 | 685 | 35 | 756 | 9.2e-269 | 935.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene79061.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene79061 | 0.808853 | 2.52E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene79061 | 0.811279 | 7.58E-51 | -1.69E-46 |
| MS.gene052447 | MS.gene79061 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene79061 | 0.830589 | 2.70E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79061.t1 | MTR_3g450850 | 69.373 | 271 | 82 | 1 | 31 | 300 | 16 | 286 | 2.71e-131 | 391 |
| MS.gene79061.t1 | MTR_4g035820 | 37.736 | 318 | 174 | 6 | 60 | 370 | 74 | 374 | 3.68e-52 | 192 |
| MS.gene79061.t1 | MTR_4g035820 | 34.896 | 192 | 103 | 4 | 449 | 637 | 326 | 498 | 1.33e-22 | 103 |
| MS.gene79061.t1 | MTR_3g012160 | 83.696 | 92 | 15 | 0 | 210 | 301 | 2 | 93 | 1.34e-46 | 160 |
| MS.gene79061.t1 | MTR_4g071400 | 94.030 | 67 | 4 | 0 | 574 | 640 | 55 | 121 | 1.20e-34 | 128 |
| MS.gene79061.t1 | MTR_1g070355 | 32.540 | 252 | 150 | 7 | 61 | 306 | 72 | 309 | 7.41e-29 | 122 |
| MS.gene79061.t1 | MTR_6g051425 | 27.208 | 283 | 194 | 5 | 62 | 341 | 18 | 291 | 5.77e-27 | 112 |
| MS.gene79061.t1 | MTR_5g076070 | 27.917 | 240 | 157 | 7 | 64 | 300 | 56 | 282 | 2.64e-23 | 100 |
| MS.gene79061.t1 | MTR_3g095940 | 74.074 | 54 | 14 | 0 | 514 | 567 | 90 | 143 | 3.63e-20 | 87.8 |
| MS.gene79061.t1 | MTR_5g083630 | 57.143 | 70 | 24 | 1 | 204 | 267 | 7 | 76 | 6.83e-18 | 80.1 |
| MS.gene79061.t1 | MTR_6g014355 | 37.013 | 154 | 81 | 5 | 142 | 287 | 14 | 159 | 9.92e-17 | 80.9 |
| MS.gene79061.t1 | MTR_6g022080 | 30.909 | 165 | 97 | 6 | 72 | 232 | 96 | 247 | 4.97e-14 | 72.8 |
| MS.gene79061.t1 | MTR_0558s0020 | 24.715 | 263 | 175 | 7 | 66 | 312 | 41 | 296 | 7.66e-14 | 73.2 |
| MS.gene79061.t1 | MTR_8g446020 | 26.178 | 191 | 131 | 4 | 126 | 312 | 72 | 256 | 1.97e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79061.t1 | AT1G10240 | 48.000 | 550 | 272 | 7 | 30 | 572 | 11 | 553 | 0.0 | 533 |
| MS.gene79061.t1 | AT1G10240 | 48.000 | 550 | 272 | 7 | 30 | 572 | 11 | 553 | 0.0 | 533 |
| MS.gene79061.t1 | AT5G28530 | 42.545 | 550 | 291 | 4 | 31 | 570 | 27 | 561 | 8.72e-160 | 476 |
| MS.gene79061.t1 | AT5G28530 | 42.545 | 550 | 291 | 4 | 31 | 570 | 27 | 561 | 8.72e-160 | 476 |
| MS.gene79061.t1 | AT5G28530 | 42.364 | 550 | 296 | 4 | 31 | 570 | 27 | 565 | 2.90e-159 | 475 |
| MS.gene79061.t1 | AT5G28530 | 38.148 | 540 | 266 | 7 | 31 | 570 | 27 | 498 | 1.09e-124 | 384 |
| MS.gene79061.t1 | AT5G28530 | 37.963 | 540 | 271 | 7 | 31 | 570 | 27 | 502 | 3.97e-124 | 382 |
| MS.gene79061.t1 | AT4G38180 | 30.255 | 509 | 341 | 6 | 61 | 566 | 73 | 570 | 2.94e-68 | 239 |
| MS.gene79061.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.07e-67 | 238 |
| MS.gene79061.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.07e-67 | 238 |
| MS.gene79061.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.07e-67 | 238 |
| MS.gene79061.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.07e-67 | 238 |
| MS.gene79061.t1 | AT4G15090 | 30.408 | 490 | 319 | 10 | 61 | 544 | 51 | 524 | 1.07e-67 | 238 |
| MS.gene79061.t1 | AT3G22170 | 27.734 | 512 | 321 | 16 | 49 | 544 | 55 | 533 | 4.26e-54 | 199 |
| MS.gene79061.t1 | AT3G22170 | 27.734 | 512 | 321 | 16 | 49 | 544 | 55 | 533 | 4.26e-54 | 199 |
| MS.gene79061.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 8.99e-52 | 191 |
| MS.gene79061.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 8.99e-52 | 191 |
| MS.gene79061.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 9.45e-52 | 191 |
| MS.gene79061.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 1.01e-51 | 191 |
| MS.gene79061.t1 | AT3G06250 | 25.800 | 500 | 306 | 12 | 61 | 555 | 190 | 629 | 5.79e-46 | 175 |
| MS.gene79061.t1 | AT3G06250 | 25.800 | 500 | 306 | 12 | 61 | 555 | 190 | 629 | 5.79e-46 | 175 |
| MS.gene79061.t1 | AT3G06250 | 25.800 | 500 | 306 | 12 | 61 | 555 | 190 | 629 | 5.79e-46 | 175 |
| MS.gene79061.t1 | AT5G18960 | 25.725 | 517 | 316 | 12 | 47 | 555 | 197 | 653 | 1.51e-45 | 174 |
| MS.gene79061.t1 | AT5G18960 | 25.725 | 517 | 316 | 12 | 47 | 555 | 197 | 653 | 1.51e-45 | 174 |
| MS.gene79061.t1 | AT2G27110 | 25.514 | 486 | 319 | 12 | 61 | 544 | 49 | 493 | 3.99e-40 | 158 |
| MS.gene79061.t1 | AT2G27110 | 25.514 | 486 | 319 | 12 | 61 | 544 | 49 | 493 | 3.99e-40 | 158 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 2.82e-39 | 155 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 139 | 427 | 3.64e-39 | 155 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.74e-39 | 155 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.74e-39 | 155 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.80e-39 | 155 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.80e-39 | 155 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.80e-39 | 155 |
| MS.gene79061.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 139 | 427 | 3.81e-39 | 155 |
| MS.gene79061.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.05e-37 | 150 |
| MS.gene79061.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.05e-37 | 150 |
| MS.gene79061.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.18e-37 | 150 |
| MS.gene79061.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.33e-37 | 150 |
| MS.gene79061.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.33e-37 | 150 |
| MS.gene79061.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 37 | 486 | 1.34e-37 | 150 |
| MS.gene79061.t1 | AT1G52520 | 25.761 | 493 | 327 | 14 | 61 | 545 | 85 | 546 | 1.61e-36 | 146 |
| MS.gene79061.t1 | AT2G27110 | 28.013 | 307 | 213 | 5 | 240 | 544 | 48 | 348 | 5.30e-36 | 145 |
| MS.gene79061.t1 | AT4G19990 | 26.087 | 414 | 260 | 9 | 135 | 544 | 44 | 415 | 3.06e-33 | 136 |
| MS.gene79061.t1 | AT1G80010 | 23.684 | 570 | 336 | 17 | 61 | 588 | 95 | 607 | 9.40e-33 | 135 |
| MS.gene79061.t1 | AT4G38170 | 27.329 | 322 | 226 | 5 | 244 | 562 | 16 | 332 | 2.31e-30 | 126 |
Find 117 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTACCCATCGTAAATTT+TGG | 0.158198 | 3.1:+20375068 | MS.gene79061:CDS |
| CCAATTAAAACTTACTTATT+AGG | 0.177601 | 3.1:-20376100 | None:intergenic |
| ATGAGATGCCTCTTGGAATA+TGG | 0.196486 | 3.1:+20374567 | MS.gene79061:CDS |
| TTCTCACAACCACGAGTTAT+TGG | 0.199264 | 3.1:+20374145 | MS.gene79061:CDS |
| ATCACATGTTCTTGAGTTTC+AGG | 0.210618 | 3.1:-20375857 | None:intergenic |
| CTCATGTTGAAGCAACTTAA+AGG | 0.248230 | 3.1:-20375422 | None:intergenic |
| TGTTTATTTGCAAAACAAAA+TGG | 0.260407 | 3.1:+20373879 | MS.gene79061:CDS |
| AAAATCTGTCAAACTTGTTT+TGG | 0.261322 | 3.1:-20375185 | None:intergenic |
| ATTCGTGCATATGAAGCTTT+TGG | 0.265394 | 3.1:+20374503 | MS.gene79061:CDS |
| CAATATGAATTCACAATTGA+TGG | 0.266214 | 3.1:+20374437 | MS.gene79061:CDS |
| TTCCTTCGCATGGGCTATAA+AGG | 0.299718 | 3.1:+20374658 | MS.gene79061:CDS |
| AATATCATCATAAAGATAAA+AGG | 0.310779 | 3.1:+20375830 | MS.gene79061:CDS |
| TCAAGAACATGTGATTGATT+TGG | 0.314506 | 3.1:+20375865 | MS.gene79061:CDS |
| CATCAATTGTGAATTCATAT+TGG | 0.326055 | 3.1:-20374436 | None:intergenic |
| ATTCAATCATATAGTGGTAT+TGG | 0.341059 | 3.1:+20374347 | MS.gene79061:CDS |
| ACTCTCGCTATAAGACTTAC+AGG | 0.343612 | 3.1:-20374257 | None:intergenic |
| CAAATTGGAGCATATTGTTT+GGG | 0.347369 | 3.1:+20374466 | MS.gene79061:CDS |
| GAGCATATTGTTTGGGCATT+TGG | 0.348974 | 3.1:+20374473 | MS.gene79061:CDS |
| ACAAATTGGAGCATATTGTT+TGG | 0.352856 | 3.1:+20374465 | MS.gene79061:CDS |
| GCAGCTACAACCCCTCCTTT+TGG | 0.354926 | 3.1:-20375971 | None:intergenic |
| AATTGATGGAAGTAACAAAT+TGG | 0.358783 | 3.1:+20374451 | MS.gene79061:CDS |
| ATGACAACGACGAGGCTTCT+TGG | 0.366012 | 3.1:-20375993 | None:intergenic |
| AACGTCACAGTCAGCATTGT+TGG | 0.377007 | 3.1:-20375900 | None:intergenic |
| ATGGTCTCACAGTTTGGTTT+GGG | 0.387072 | 3.1:+20375022 | MS.gene79061:CDS |
| GTAGTTACTAAGAGAAGAAT+TGG | 0.389295 | 3.1:+20374086 | MS.gene79061:CDS |
| AATGGTCTCACAGTTTGGTT+TGG | 0.398201 | 3.1:+20375021 | MS.gene79061:CDS |
| CCTCAAGTCACTAACATTGA+TGG | 0.399508 | 3.1:+20373690 | MS.gene79061:CDS |
| GCAATGGCTTCTTTAATTGA+AGG | 0.406562 | 3.1:-20374830 | None:intergenic |
| TCAAATATTTGCCCTTCAAA+AGG | 0.411166 | 3.1:-20373720 | None:intergenic |
| ATCCATCGGGTGTTTATAAG+AGG | 0.417116 | 3.1:+20373958 | MS.gene79061:CDS |
| TTTGCTGGAATGACAACAAC+AGG | 0.418779 | 3.1:+20375118 | MS.gene79061:CDS |
| AAAGTAATGGTCTCACAGTT+TGG | 0.427267 | 3.1:+20375016 | MS.gene79061:CDS |
| TGAGATGCCTCTTGGAATAT+GGG | 0.433904 | 3.1:+20374568 | MS.gene79061:CDS |
| TTGGGCCTTAGCTTATTTGA+AGG | 0.435274 | 3.1:+20375087 | MS.gene79061:CDS |
| TATACGACCACCATCAACTT+TGG | 0.437731 | 3.1:-20375512 | None:intergenic |
| CTTTAAACATGAGTTTCATA+AGG | 0.439926 | 3.1:+20374952 | MS.gene79061:CDS |
| GACGAGGCATGTTCTTCAAT+AGG | 0.443666 | 3.1:-20375382 | None:intergenic |
| TGATTAGTTCCACCACAATC+TGG | 0.446933 | 3.1:-20376019 | None:intergenic |
| AACCGTTATGAGATGCCTCT+TGG | 0.448749 | 3.1:+20374560 | MS.gene79061:CDS |
| AAAGACAAGTGAACGAGAAC+AGG | 0.453486 | 3.1:+20375787 | MS.gene79061:intron |
| GGAAAATGTGTTGTAATATG+AGG | 0.458305 | 3.1:-20375361 | None:intergenic |
| GTTTGTCATCGTGGTGGTAT+TGG | 0.458689 | 3.1:+20373987 | MS.gene79061:CDS |
| ATGCGATCTTGATCAACAAT+TGG | 0.465554 | 3.1:-20374209 | None:intergenic |
| CTCACAGTTTGGTTTGGGTG+TGG | 0.468983 | 3.1:+20375027 | MS.gene79061:CDS |
| ATAACGGTTTATTCTATATG+TGG | 0.472493 | 3.1:-20374546 | None:intergenic |
| TATAAGACTTACAGGGCAAC+CGG | 0.483233 | 3.1:-20374249 | None:intergenic |
| CTTGAGTTAGAGAAAAGAAC+AGG | 0.494786 | 3.1:+20374281 | MS.gene79061:CDS |
| AAAACAAAAGGTCGGCCAAA+AGG | 0.495104 | 3.1:+20375941 | MS.gene79061:CDS |
| TTGATAGGATCATGAAGGGT+TGG | 0.498564 | 3.1:+20376187 | MS.gene79061:intron |
| TGAAGCAACTTAAAGGCATA+AGG | 0.499495 | 3.1:-20375415 | None:intergenic |
| AGAAGATTTCTTCCTTCGCA+TGG | 0.503824 | 3.1:+20374648 | MS.gene79061:CDS |
| CGTTGTCATGTTCCAGATTG+TGG | 0.504732 | 3.1:+20376007 | MS.gene79061:CDS |
| AATTGTGAATTCATATTGGA+AGG | 0.507660 | 3.1:-20374432 | None:intergenic |
| CCAAAAGGATCAAGACCAAA+AGG | 0.514192 | 3.1:+20375956 | MS.gene79061:CDS |
| GTCAAAATTAGAAATCAAGC+TGG | 0.517568 | 3.1:+20375304 | MS.gene79061:CDS |
| TTTAATTGAAGGATCTTGAT+CGG | 0.518039 | 3.1:-20374819 | None:intergenic |
| ATTGGAATGTTACGATAAGC+AGG | 0.522557 | 3.1:-20374191 | None:intergenic |
| ATGTTATTGACTTGAGGCAA+GGG | 0.525418 | 3.1:-20373792 | None:intergenic |
| TAAGCAATGATGCTAGTGAT+TGG | 0.525487 | 3.1:+20373661 | MS.gene79061:CDS |
| ACCACGCAAAACTGTTGAAG+TGG | 0.526679 | 3.1:+20374013 | MS.gene79061:CDS |
| TTAGAGAAAAGAACAGGCAC+AGG | 0.528687 | 3.1:+20374287 | MS.gene79061:CDS |
| TGGGTTGGTGTTGATAATCA+TGG | 0.529258 | 3.1:+20374587 | MS.gene79061:CDS |
| ATACTATTATTGTCTAAAGC+CGG | 0.531055 | 3.1:+20374230 | MS.gene79061:CDS |
| TTCCAAGAGGCATCTCATAA+CGG | 0.531646 | 3.1:-20374562 | None:intergenic |
| CAACATCATACCAAAGTTGA+TGG | 0.538288 | 3.1:+20375502 | MS.gene79061:CDS |
| TGAACGAGAATGGAAAGTAA+TGG | 0.544871 | 3.1:+20375003 | MS.gene79061:CDS |
| TTGCACAACATAAGAGCCAT+TGG | 0.551354 | 3.1:-20375482 | None:intergenic |
| CTCAAGTCACTAACATTGAT+GGG | 0.551567 | 3.1:+20373691 | MS.gene79061:CDS |
| TAAGAGAAGAATTGGCATTG+AGG | 0.553953 | 3.1:+20374094 | MS.gene79061:CDS |
| GAAGATTTCTTCCTTCGCAT+GGG | 0.556681 | 3.1:+20374649 | MS.gene79061:CDS |
| GTGCTTTGATAGGATCATGA+AGG | 0.556862 | 3.1:+20376182 | MS.gene79061:intron |
| CAAGTCAATAACATTGATGA+GGG | 0.558520 | 3.1:+20373801 | MS.gene79061:CDS |
| AAAGTCCTTCAAATAAGCTA+AGG | 0.560983 | 3.1:-20375092 | None:intergenic |
| ACATGTGATTGATTTGGAAG+AGG | 0.565753 | 3.1:+20375871 | MS.gene79061:CDS |
| GTTTGGCAATTCCATTGCAA+TGG | 0.567761 | 3.1:-20374846 | None:intergenic |
| ATGTGATTGTAGTGCAAAGA+TGG | 0.570079 | 3.1:+20374064 | MS.gene79061:CDS |
| ATGTTAGTGACTTGAGGCAA+GGG | 0.572230 | 3.1:-20373684 | None:intergenic |
| GTGTCAGAAGAGAATCCATC+GGG | 0.572540 | 3.1:+20373945 | MS.gene79061:CDS |
| TCATCAATGTTATTGACTTG+AGG | 0.573525 | 3.1:-20373798 | None:intergenic |
| AATTAAAGAAGCCATTGCAA+TGG | 0.576797 | 3.1:+20374835 | MS.gene79061:CDS |
| TAGAAATCAAGCTGGAGAAG+AGG | 0.577533 | 3.1:+20375312 | MS.gene79061:CDS |
| CGAGTTATTGGATGACAAAG+AGG | 0.580002 | 3.1:+20374157 | MS.gene79061:CDS |
| AATGTTATTGACTTGAGGCA+AGG | 0.580693 | 3.1:-20373793 | None:intergenic |
| AGTCACTAACATTGATGGGT+GGG | 0.589348 | 3.1:+20373695 | MS.gene79061:CDS |
| TTGTCGCAAAGCTGTCAAGT+TGG | 0.589381 | 3.1:+20374897 | MS.gene79061:CDS |
| TCATCATATCTCGAACCTAG+TGG | 0.597376 | 3.1:-20374929 | None:intergenic |
| AATGTTAGTGACTTGAGGCA+AGG | 0.597462 | 3.1:-20373685 | None:intergenic |
| AGGGAATTTGTTTGTCATCG+TGG | 0.598966 | 3.1:+20373978 | MS.gene79061:CDS |
| TCCCTCTTATAAACACCCGA+TGG | 0.599604 | 3.1:-20373960 | None:intergenic |
| GCAGCAATTGAAGCTGCCAA+TGG | 0.600590 | 3.1:+20375466 | MS.gene79061:CDS |
| TACCTTTATAGCCCATGCGA+AGG | 0.601051 | 3.1:-20374660 | None:intergenic |
| TCAAGTCAATAACATTGATG+AGG | 0.603097 | 3.1:+20373800 | MS.gene79061:CDS |
| CTGTTGAAGTGGAAAATCAA+AGG | 0.606328 | 3.1:+20374024 | MS.gene79061:CDS |
| CTTTGTCATCCAATAACTCG+TGG | 0.606716 | 3.1:-20374154 | None:intergenic |
| AAGGATCAAGACCAAAAGGA+GGG | 0.611165 | 3.1:+20375960 | MS.gene79061:CDS |
| CCATCAATGTTAGTGACTTG+AGG | 0.613145 | 3.1:-20373690 | None:intergenic |
| CTAAGGCCCAAAATTTACGA+TGG | 0.615020 | 3.1:-20375075 | None:intergenic |
| TAAGGCCCAAAATTTACGAT+GGG | 0.615697 | 3.1:-20375074 | None:intergenic |
| ATGCCTCTTGGAATATGGGT+TGG | 0.616141 | 3.1:+20374572 | MS.gene79061:CDS |
| GAATTTGTTTGTCATCGTGG+TGG | 0.618777 | 3.1:+20373981 | MS.gene79061:CDS |
| AAGTCACTAACATTGATGGG+TGG | 0.624878 | 3.1:+20373694 | MS.gene79061:CDS |
| TCCATCGGGTGTTTATAAGA+GGG | 0.625908 | 3.1:+20373959 | MS.gene79061:CDS |
| ACGAGAACAGGTTGCCACAA+GGG | 0.630576 | 3.1:+20375799 | MS.gene79061:CDS |
| TGTGTCAGAAGAGAATCCAT+CGG | 0.632507 | 3.1:+20373944 | MS.gene79061:CDS |
| AACGAGAACAGGTTGCCACA+AGG | 0.633734 | 3.1:+20375798 | MS.gene79061:CDS |
| TACTTATTAGGAGATTGAGA+AGG | 0.635742 | 3.1:-20376088 | None:intergenic |
| TGTCATGTTCCAGATTGTGG+TGG | 0.637809 | 3.1:+20376010 | MS.gene79061:CDS |
| CTCTCGCTATAAGACTTACA+GGG | 0.647869 | 3.1:-20374256 | None:intergenic |
| AAAGGATCAAGACCAAAAGG+AGG | 0.655085 | 3.1:+20375959 | MS.gene79061:CDS |
| ACACCAACCCATATTCCAAG+AGG | 0.676376 | 3.1:-20374575 | None:intergenic |
| TGCTTTGATAGGATCATGAA+GGG | 0.676443 | 3.1:+20376183 | MS.gene79061:intron |
| AAGTTTGAAAGATCGAGATG+AGG | 0.682349 | 3.1:+20374409 | MS.gene79061:CDS |
| CATCATACCAAAGTTGATGG+TGG | 0.683172 | 3.1:+20375505 | MS.gene79061:CDS |
| AGGATCAAGACCAAAAGGAG+GGG | 0.696841 | 3.1:+20375961 | MS.gene79061:CDS |
| AAGTCAATAACATTGATGAG+GGG | 0.714581 | 3.1:+20373802 | MS.gene79061:CDS |
| ATAAGGTGTGAGTATAGACG+AGG | 0.720548 | 3.1:-20375398 | None:intergenic |
| TCTGGAACATGACAACGACG+AGG | 0.797744 | 3.1:-20376001 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTAACTGTATTTTTA+TGG | + | chr3.1:20376160-20376179 | MS.gene79061:intron | 10.0% |
| !! | AATATCATCATAAAGATAAA+AGG | + | chr3.1:20375830-20375849 | MS.gene79061:CDS | 15.0% |
| !!! | AATTTTATTCAATCATATAG+TGG | + | chr3.1:20374341-20374360 | MS.gene79061:CDS | 15.0% |
| !! | CCAATTAAAACTTACTTATT+AGG | - | chr3.1:20376103-20376122 | None:intergenic | 20.0% |
| !! | TGTTTATTTGCAAAACAAAA+TGG | + | chr3.1:20373879-20373898 | MS.gene79061:CDS | 20.0% |
| !!! | AACAAAATGGATTTTCTATT+AGG | + | chr3.1:20373892-20373911 | MS.gene79061:CDS | 20.0% |
| !!! | CATGGAAATTCAATTTTTTT+TGG | + | chr3.1:20374605-20374624 | MS.gene79061:CDS | 20.0% |
| !!! | CCTAATAAGTAAGTTTTAAT+TGG | + | chr3.1:20376100-20376119 | MS.gene79061:intron | 20.0% |
| !!! | CTAATATCTTTTTCTAAGAA+TGG | - | chr3.1:20374320-20374339 | None:intergenic | 20.0% |
| !!! | TGATTGTTATATTTTTGTGT+AGG | + | chr3.1:20375270-20375289 | MS.gene79061:intron | 20.0% |
| !!! | TTATTACATGACTAGATTTT+GGG | - | chr3.1:20375702-20375721 | None:intergenic | 20.0% |
| !!! | TTTATTACATGACTAGATTT+TGG | - | chr3.1:20375703-20375722 | None:intergenic | 20.0% |
| ! | AATTGATGGAAGTAACAAAT+TGG | + | chr3.1:20374451-20374470 | MS.gene79061:CDS | 25.0% |
| ! | AATTGTGAATTCATATTGGA+AGG | - | chr3.1:20374435-20374454 | None:intergenic | 25.0% |
| ! | ATAACGGTTTATTCTATATG+TGG | - | chr3.1:20374549-20374568 | None:intergenic | 25.0% |
| ! | ATTCAATCATATAGTGGTAT+TGG | + | chr3.1:20374347-20374366 | MS.gene79061:CDS | 25.0% |
| ! | CAATATGAATTCACAATTGA+TGG | + | chr3.1:20374437-20374456 | MS.gene79061:CDS | 25.0% |
| ! | CATCAATTGTGAATTCATAT+TGG | - | chr3.1:20374439-20374458 | None:intergenic | 25.0% |
| ! | CTTTAAACATGAGTTTCATA+AGG | + | chr3.1:20374952-20374971 | MS.gene79061:CDS | 25.0% |
| ! | TCCAAACAAAAAGAGAAAAA+TGG | + | chr3.1:20376057-20376076 | MS.gene79061:CDS | 25.0% |
| ! | TTGTTTCAAAAACAAAAGGT+CGG | + | chr3.1:20375933-20375952 | MS.gene79061:CDS | 25.0% |
| ! | TTTAATTGAAGGATCTTGAT+CGG | - | chr3.1:20374822-20374841 | None:intergenic | 25.0% |
| !! | ATACTATTATTGTCTAAAGC+CGG | + | chr3.1:20374230-20374249 | MS.gene79061:CDS | 25.0% |
| !! | TCAAATATTTTCCCTTCAAA+AGG | - | chr3.1:20373831-20373850 | None:intergenic | 25.0% |
| !! | TGTAAAGAGTTTCAATTTTC+AGG | + | chr3.1:20375574-20375593 | MS.gene79061:intron | 25.0% |
| !!! | AAAATCTGTCAAACTTGTTT+TGG | - | chr3.1:20375188-20375207 | None:intergenic | 25.0% |
| !!! | TATTTTTATGGTGCTTTGAT+AGG | + | chr3.1:20376172-20376191 | MS.gene79061:intron | 25.0% |
| !!! | TCCATTTTTCTCTTTTTGTT+TGG | - | chr3.1:20376061-20376080 | None:intergenic | 25.0% |
| !!! | TGTTATATTTTTGTGTAGGT+TGG | + | chr3.1:20375274-20375293 | MS.gene79061:intron | 25.0% |
| AAAGTCCTTCAAATAAGCTA+AGG | - | chr3.1:20375095-20375114 | None:intergenic | 30.0% | |
| AAGTCAATAACATTGATGAG+GGG | + | chr3.1:20373802-20373821 | MS.gene79061:CDS | 30.0% | |
| AATTAAAGAAGCCATTGCAA+TGG | + | chr3.1:20374835-20374854 | MS.gene79061:CDS | 30.0% | |
| ACAAATTGGAGCATATTGTT+TGG | + | chr3.1:20374465-20374484 | MS.gene79061:CDS | 30.0% | |
| CAAATTGGAGCATATTGTTT+GGG | + | chr3.1:20374466-20374485 | MS.gene79061:CDS | 30.0% | |
| CAAGTCAATAACATTGATGA+GGG | + | chr3.1:20373801-20373820 | MS.gene79061:CDS | 30.0% | |
| CATGTAATAAACTGCAATGA+TGG | + | chr3.1:20375712-20375731 | MS.gene79061:intron | 30.0% | |
| GGAAAATGTGTTGTAATATG+AGG | - | chr3.1:20375364-20375383 | None:intergenic | 30.0% | |
| GTAGTTACTAAGAGAAGAAT+TGG | + | chr3.1:20374086-20374105 | MS.gene79061:CDS | 30.0% | |
| GTCAAAATTAGAAATCAAGC+TGG | + | chr3.1:20375304-20375323 | MS.gene79061:CDS | 30.0% | |
| TACTTATTAGGAGATTGAGA+AGG | - | chr3.1:20376091-20376110 | None:intergenic | 30.0% | |
| TCAAATATTTGCCCTTCAAA+AGG | - | chr3.1:20373723-20373742 | None:intergenic | 30.0% | |
| TCAAGAACATGTGATTGATT+TGG | + | chr3.1:20375865-20375884 | MS.gene79061:CDS | 30.0% | |
| TCAAGTCAATAACATTGATG+AGG | + | chr3.1:20373800-20373819 | MS.gene79061:CDS | 30.0% | |
| ! | AATTGGCATTGAGGAAAAAT+GGG | + | chr3.1:20374103-20374122 | MS.gene79061:CDS | 30.0% |
| ! | ATTTTCCTTTCACAAAAGCT+AGG | - | chr3.1:20374781-20374800 | None:intergenic | 30.0% |
| ! | CAAAACATGCATTTTGCATA+TGG | + | chr3.1:20374870-20374889 | MS.gene79061:CDS | 30.0% |
| ! | CAAAATATCTTCCTTTTCGA+TGG | + | chr3.1:20375656-20375675 | MS.gene79061:intron | 30.0% |
| ! | CAAAATGCATGTTTTGTGTT+TGG | - | chr3.1:20374866-20374885 | None:intergenic | 30.0% |
| ! | CTTTACCCATCGTAAATTTT+GGG | + | chr3.1:20375069-20375088 | MS.gene79061:CDS | 30.0% |
| ! | TCTTTACCCATCGTAAATTT+TGG | + | chr3.1:20375068-20375087 | MS.gene79061:CDS | 30.0% |
| ! | TGATCGGTAAGAATTGTTTT+TGG | - | chr3.1:20374806-20374825 | None:intergenic | 30.0% |
| !! | CCTGTTGTTTCAAAAACAAA+AGG | + | chr3.1:20375929-20375948 | MS.gene79061:CDS | 30.0% |
| !! | CGAAAAGGAAGATATTTTGA+TGG | - | chr3.1:20375655-20375674 | None:intergenic | 30.0% |
| !! | TCATCAATGTTATTGACTTG+AGG | - | chr3.1:20373801-20373820 | None:intergenic | 30.0% |
| !!! | CCTTTTGTTTTTGAAACAAC+AGG | - | chr3.1:20375932-20375951 | None:intergenic | 30.0% |
| !!! | TTGAAGGACTTTTTTTTTGC+TGG | + | chr3.1:20375103-20375122 | MS.gene79061:CDS | 30.0% |
| AAAGTAATGGTCTCACAGTT+TGG | + | chr3.1:20375016-20375035 | MS.gene79061:CDS | 35.0% | |
| AAGTTTGAAAGATCGAGATG+AGG | + | chr3.1:20374409-20374428 | MS.gene79061:CDS | 35.0% | |
| ATCACATGTTCTTGAGTTTC+AGG | - | chr3.1:20375860-20375879 | None:intergenic | 35.0% | |
| ATGCGATCTTGATCAACAAT+TGG | - | chr3.1:20374212-20374231 | None:intergenic | 35.0% | |
| ATGTGATTGTAGTGCAAAGA+TGG | + | chr3.1:20374064-20374083 | MS.gene79061:CDS | 35.0% | |
| ATTGGAATGTTACGATAAGC+AGG | - | chr3.1:20374194-20374213 | None:intergenic | 35.0% | |
| CAACATCATACCAAAGTTGA+TGG | + | chr3.1:20375502-20375521 | MS.gene79061:CDS | 35.0% | |
| CTCAAGTCACTAACATTGAT+GGG | + | chr3.1:20373691-20373710 | MS.gene79061:CDS | 35.0% | |
| CTCATGTTGAAGCAACTTAA+AGG | - | chr3.1:20375425-20375444 | None:intergenic | 35.0% | |
| CTGTTGAAGTGGAAAATCAA+AGG | + | chr3.1:20374024-20374043 | MS.gene79061:CDS | 35.0% | |
| CTTGAGTTAGAGAAAAGAAC+AGG | + | chr3.1:20374281-20374300 | MS.gene79061:CDS | 35.0% | |
| GCAATGGCTTCTTTAATTGA+AGG | - | chr3.1:20374833-20374852 | None:intergenic | 35.0% | |
| TAAGAGAAGAATTGGCATTG+AGG | + | chr3.1:20374094-20374113 | MS.gene79061:CDS | 35.0% | |
| TAAGCAATGATGCTAGTGAT+TGG | + | chr3.1:20373661-20373680 | MS.gene79061:CDS | 35.0% | |
| TAAGGCCCAAAATTTACGAT+GGG | - | chr3.1:20375077-20375096 | None:intergenic | 35.0% | |
| TAGAGACTGAAATTTAGCAG+AGG | - | chr3.1:20375740-20375759 | None:intergenic | 35.0% | |
| TGAACGAGAATGGAAAGTAA+TGG | + | chr3.1:20375003-20375022 | MS.gene79061:CDS | 35.0% | |
| TGCTTTGATAGGATCATGAA+GGG | + | chr3.1:20376183-20376202 | MS.gene79061:intron | 35.0% | |
| ! | ATTCGTGCATATGAAGCTTT+TGG | + | chr3.1:20374503-20374522 | MS.gene79061:CDS | 35.0% |
| ! | CAGATGATTTTGAACGAGAA+TGG | + | chr3.1:20374993-20375012 | MS.gene79061:CDS | 35.0% |
| ! | CAGTCTCTAATTCGATGTTT+TGG | + | chr3.1:20375751-20375770 | MS.gene79061:intron | 35.0% |
| ! | GAATTGGCATTGAGGAAAAA+TGG | + | chr3.1:20374102-20374121 | MS.gene79061:CDS | 35.0% |
| ! | GATATTTTCTAACTCCCTTG+TGG | - | chr3.1:20375816-20375835 | None:intergenic | 35.0% |
| ! | TGAAGCAACTTAAAGGCATA+AGG | - | chr3.1:20375418-20375437 | None:intergenic | 35.0% |
| !! | AATGTTATTGACTTGAGGCA+AGG | - | chr3.1:20373796-20373815 | None:intergenic | 35.0% |
| !! | ACATGTGATTGATTTGGAAG+AGG | + | chr3.1:20375871-20375890 | MS.gene79061:CDS | 35.0% |
| !! | AGTTTCCTAGCTTTTGTGAA+AGG | + | chr3.1:20374773-20374792 | MS.gene79061:CDS | 35.0% |
| !! | ATGTTATTGACTTGAGGCAA+GGG | - | chr3.1:20373795-20373814 | None:intergenic | 35.0% |
| !!! | AGTTGGTTTTCTTTTCCACT+AGG | + | chr3.1:20374914-20374933 | MS.gene79061:CDS | 35.0% |
| AAAACAAAAGGTCGGCCAAA+AGG | + | chr3.1:20375941-20375960 | MS.gene79061:CDS | 40.0% | |
| AAAGACAAGTGAACGAGAAC+AGG | + | chr3.1:20375787-20375806 | MS.gene79061:intron | 40.0% | |
| AAAGGATCAAGACCAAAAGG+AGG | + | chr3.1:20375959-20375978 | MS.gene79061:CDS | 40.0% | |
| AAGGATCAAGACCAAAAGGA+GGG | + | chr3.1:20375960-20375979 | MS.gene79061:CDS | 40.0% | |
| AAGTCACTAACATTGATGGG+TGG | + | chr3.1:20373694-20373713 | MS.gene79061:CDS | 40.0% | |
| AATGGTCTCACAGTTTGGTT+TGG | + | chr3.1:20375021-20375040 | MS.gene79061:CDS | 40.0% | |
| AATGTTAGTGACTTGAGGCA+AGG | - | chr3.1:20373688-20373707 | None:intergenic | 40.0% | |
| ACTCTCGCTATAAGACTTAC+AGG | - | chr3.1:20374260-20374279 | None:intergenic | 40.0% | |
| AGAAGATTTCTTCCTTCGCA+TGG | + | chr3.1:20374648-20374667 | MS.gene79061:CDS | 40.0% | |
| ATAAGGTGTGAGTATAGACG+AGG | - | chr3.1:20375401-20375420 | None:intergenic | 40.0% | |
| ATCCATCGGGTGTTTATAAG+AGG | + | chr3.1:20373958-20373977 | MS.gene79061:CDS | 40.0% | |
| ATGAGATGCCTCTTGGAATA+TGG | + | chr3.1:20374567-20374586 | MS.gene79061:CDS | 40.0% | |
| ATGTTAGTGACTTGAGGCAA+GGG | - | chr3.1:20373687-20373706 | None:intergenic | 40.0% | |
| CCAAAAGGATCAAGACCAAA+AGG | + | chr3.1:20375956-20375975 | MS.gene79061:CDS | 40.0% | |
| CCATCAATGTTAGTGACTTG+AGG | - | chr3.1:20373693-20373712 | None:intergenic | 40.0% | |
| CCTCAAGTCACTAACATTGA+TGG | + | chr3.1:20373690-20373709 | MS.gene79061:CDS | 40.0% | |
| CGAGTTATTGGATGACAAAG+AGG | + | chr3.1:20374157-20374176 | MS.gene79061:CDS | 40.0% | |
| CTAAGGCCCAAAATTTACGA+TGG | - | chr3.1:20375078-20375097 | None:intergenic | 40.0% | |
| CTCTCGCTATAAGACTTACA+GGG | - | chr3.1:20374259-20374278 | None:intergenic | 40.0% | |
| CTTTGTCATCCAATAACTCG+TGG | - | chr3.1:20374157-20374176 | None:intergenic | 40.0% | |
| GAAGATTTCTTCCTTCGCAT+GGG | + | chr3.1:20374649-20374668 | MS.gene79061:CDS | 40.0% | |
| GAGCATATTGTTTGGGCATT+TGG | + | chr3.1:20374473-20374492 | MS.gene79061:CDS | 40.0% | |
| GTGCTTTGATAGGATCATGA+AGG | + | chr3.1:20376182-20376201 | MS.gene79061:intron | 40.0% | |
| GTTTGGCAATTCCATTGCAA+TGG | - | chr3.1:20374849-20374868 | None:intergenic | 40.0% | |
| TAGAAATCAAGCTGGAGAAG+AGG | + | chr3.1:20375312-20375331 | MS.gene79061:CDS | 40.0% | |
| TATAAGACTTACAGGGCAAC+CGG | - | chr3.1:20374252-20374271 | None:intergenic | 40.0% | |
| TATACGACCACCATCAACTT+TGG | - | chr3.1:20375515-20375534 | None:intergenic | 40.0% | |
| TCATCATATCTCGAACCTAG+TGG | - | chr3.1:20374932-20374951 | None:intergenic | 40.0% | |
| TCCATCGGGTGTTTATAAGA+GGG | + | chr3.1:20373959-20373978 | MS.gene79061:CDS | 40.0% | |
| TGAGATGCCTCTTGGAATAT+GGG | + | chr3.1:20374568-20374587 | MS.gene79061:CDS | 40.0% | |
| TGTGTCAGAAGAGAATCCAT+CGG | + | chr3.1:20373944-20373963 | MS.gene79061:CDS | 40.0% | |
| TTAGAGAAAAGAACAGGCAC+AGG | + | chr3.1:20374287-20374306 | MS.gene79061:CDS | 40.0% | |
| TTCTCACAACCACGAGTTAT+TGG | + | chr3.1:20374145-20374164 | MS.gene79061:CDS | 40.0% | |
| TTGATAGGATCATGAAGGGT+TGG | + | chr3.1:20376187-20376206 | MS.gene79061:intron | 40.0% | |
| TTGCACAACATAAGAGCCAT+TGG | - | chr3.1:20375485-20375504 | None:intergenic | 40.0% | |
| TTGGGCCTTAGCTTATTTGA+AGG | + | chr3.1:20375087-20375106 | MS.gene79061:CDS | 40.0% | |
| TTTGCTGGAATGACAACAAC+AGG | + | chr3.1:20375118-20375137 | MS.gene79061:CDS | 40.0% | |
| ! | AGGGAATTTGTTTGTCATCG+TGG | + | chr3.1:20373978-20373997 | MS.gene79061:CDS | 40.0% |
| ! | AGTCACTAACATTGATGGGT+GGG | + | chr3.1:20373695-20373714 | MS.gene79061:CDS | 40.0% |
| ! | ATGAGGGGATTCCTTTTGAA+GGG | + | chr3.1:20373817-20373836 | MS.gene79061:CDS | 40.0% |
| ! | ATGGTCTCACAGTTTGGTTT+GGG | + | chr3.1:20375022-20375041 | MS.gene79061:CDS | 40.0% |
| ! | GAATTTGTTTGTCATCGTGG+TGG | + | chr3.1:20373981-20374000 | MS.gene79061:CDS | 40.0% |
| ! | TGATTAGTTCCACCACAATC+TGG | - | chr3.1:20376022-20376041 | None:intergenic | 40.0% |
| !! | CATCATACCAAAGTTGATGG+TGG | + | chr3.1:20375505-20375524 | MS.gene79061:CDS | 40.0% |
| !! | TGGGTTGGTGTTGATAATCA+TGG | + | chr3.1:20374587-20374606 | MS.gene79061:CDS | 40.0% |
| !! | TTCCAAGAGGCATCTCATAA+CGG | - | chr3.1:20374565-20374584 | None:intergenic | 40.0% |
| !!! | CCTTTTGGTCTTGATCCTTT+TGG | - | chr3.1:20375959-20375978 | None:intergenic | 40.0% |
| AACCGTTATGAGATGCCTCT+TGG | + | chr3.1:20374560-20374579 | MS.gene79061:CDS | 45.0% | |
| AACGTCACAGTCAGCATTGT+TGG | - | chr3.1:20375903-20375922 | None:intergenic | 45.0% | |
| ACACCAACCCATATTCCAAG+AGG | - | chr3.1:20374578-20374597 | None:intergenic | 45.0% | |
| ACCACGCAAAACTGTTGAAG+TGG | + | chr3.1:20374013-20374032 | MS.gene79061:CDS | 45.0% | |
| AGGATCAAGACCAAAAGGAG+GGG | + | chr3.1:20375961-20375980 | MS.gene79061:CDS | 45.0% | |
| ATGCCTCTTGGAATATGGGT+TGG | + | chr3.1:20374572-20374591 | MS.gene79061:CDS | 45.0% | |
| CGTTGTCATGTTCCAGATTG+TGG | + | chr3.1:20376007-20376026 | MS.gene79061:CDS | 45.0% | |
| CTTTCTCGTCTCCATCGAAA+AGG | - | chr3.1:20375670-20375689 | None:intergenic | 45.0% | |
| GACGAGGCATGTTCTTCAAT+AGG | - | chr3.1:20375385-20375404 | None:intergenic | 45.0% | |
| GTGTCAGAAGAGAATCCATC+GGG | + | chr3.1:20373945-20373964 | MS.gene79061:CDS | 45.0% | |
| GTTTGTCATCGTGGTGGTAT+TGG | + | chr3.1:20373987-20374006 | MS.gene79061:CDS | 45.0% | |
| TACCTTTATAGCCCATGCGA+AGG | - | chr3.1:20374663-20374682 | None:intergenic | 45.0% | |
| TCCCTCTTATAAACACCCGA+TGG | - | chr3.1:20373963-20373982 | None:intergenic | 45.0% | |
| TGTCATGTTCCAGATTGTGG+TGG | + | chr3.1:20376010-20376029 | MS.gene79061:CDS | 45.0% | |
| TTGTCGCAAAGCTGTCAAGT+TGG | + | chr3.1:20374897-20374916 | MS.gene79061:CDS | 45.0% | |
| ! | GATGAGGGGATTCCTTTTGA+AGG | + | chr3.1:20373816-20373835 | MS.gene79061:CDS | 45.0% |
| ! | TCCACTTCAACAGTTTTGCG+TGG | - | chr3.1:20374017-20374036 | None:intergenic | 45.0% |
| ! | TGGCATTGAGGAAAAATGGG+TGG | + | chr3.1:20374106-20374125 | MS.gene79061:CDS | 45.0% |
| ! | TTCCTTCGCATGGGCTATAA+AGG | + | chr3.1:20374658-20374677 | MS.gene79061:CDS | 45.0% |
| !! | ATGGGTGGGTTCCTTTTGAA+GGG | + | chr3.1:20373709-20373728 | MS.gene79061:CDS | 45.0% |
| AACGAGAACAGGTTGCCACA+AGG | + | chr3.1:20375798-20375817 | MS.gene79061:CDS | 50.0% | |
| ACGAGAACAGGTTGCCACAA+GGG | + | chr3.1:20375799-20375818 | MS.gene79061:CDS | 50.0% | |
| ATGACAACGACGAGGCTTCT+TGG | - | chr3.1:20375996-20376015 | None:intergenic | 50.0% | |
| GCAGCAATTGAAGCTGCCAA+TGG | + | chr3.1:20375466-20375485 | MS.gene79061:CDS | 50.0% | |
| ! | TCTGGAACATGACAACGACG+AGG | - | chr3.1:20376004-20376023 | None:intergenic | 50.0% |
| !! | CTCACAGTTTGGTTTGGGTG+TGG | + | chr3.1:20375027-20375046 | MS.gene79061:CDS | 50.0% |
| !! | GATGGGTGGGTTCCTTTTGA+AGG | + | chr3.1:20373708-20373727 | MS.gene79061:CDS | 50.0% |
| ! | GCAGCTACAACCCCTCCTTT+TGG | - | chr3.1:20375974-20375993 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 20373648 | 20376215 | 20373648 | ID=MS.gene79061 |
| chr3.1 | mRNA | 20373648 | 20376215 | 20373648 | ID=MS.gene79061.t1;Parent=MS.gene79061 |
| chr3.1 | exon | 20373648 | 20374679 | 20373648 | ID=MS.gene79061.t1.exon1;Parent=MS.gene79061.t1 |
| chr3.1 | CDS | 20373648 | 20374679 | 20373648 | ID=cds.MS.gene79061.t1;Parent=MS.gene79061.t1 |
| chr3.1 | exon | 20374773 | 20375216 | 20374773 | ID=MS.gene79061.t1.exon2;Parent=MS.gene79061.t1 |
| chr3.1 | CDS | 20374773 | 20375216 | 20374773 | ID=cds.MS.gene79061.t1;Parent=MS.gene79061.t1 |
| chr3.1 | exon | 20375292 | 20375534 | 20375292 | ID=MS.gene79061.t1.exon3;Parent=MS.gene79061.t1 |
| chr3.1 | CDS | 20375292 | 20375534 | 20375292 | ID=cds.MS.gene79061.t1;Parent=MS.gene79061.t1 |
| chr3.1 | exon | 20375791 | 20376107 | 20375791 | ID=MS.gene79061.t1.exon4;Parent=MS.gene79061.t1 |
| chr3.1 | CDS | 20375791 | 20376107 | 20375791 | ID=cds.MS.gene79061.t1;Parent=MS.gene79061.t1 |
| chr3.1 | exon | 20376194 | 20376215 | 20376194 | ID=MS.gene79061.t1.exon5;Parent=MS.gene79061.t1 |
| chr3.1 | CDS | 20376194 | 20376215 | 20376194 | ID=cds.MS.gene79061.t1;Parent=MS.gene79061.t1 |
| Gene Sequence |
| Protein sequence |
