Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79392.t1 | XP_013459112.1 | 97.9 | 48 | 1 | 0 | 1 | 48 | 1 | 48 | 4.30E-14 | 88.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79392.t1 | A0A072V4P7 | 97.9 | 48 | 1 | 0 | 1 | 48 | 1 | 48 | 3.1e-14 | 88.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053568 | MS.gene79392 | 0.801996 | 6.92E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79392.t1 | MTR_3g026230 | 80.228 | 263 | 17 | 3 | 1 | 239 | 1 | 252 | 1.99e-111 | 320 |
| MS.gene79392.t1 | MTR_3g026160 | 86.441 | 177 | 22 | 1 | 1 | 175 | 1 | 177 | 3.39e-82 | 244 |
| MS.gene79392.t1 | MTR_3g026160 | 62.791 | 86 | 18 | 2 | 147 | 232 | 37 | 108 | 7.73e-17 | 76.3 |
| MS.gene79392.t1 | MTR_3g026330 | 63.602 | 261 | 65 | 5 | 1 | 232 | 1 | 260 | 6.04e-78 | 238 |
| MS.gene79392.t1 | MTR_3g026330 | 71.500 | 200 | 54 | 2 | 40 | 239 | 148 | 344 | 2.06e-65 | 206 |
| MS.gene79392.t1 | MTR_3g026330 | 72.959 | 196 | 48 | 3 | 39 | 232 | 101 | 293 | 1.57e-63 | 201 |
| MS.gene79392.t1 | MTR_3g026330 | 60.938 | 192 | 35 | 6 | 38 | 208 | 165 | 337 | 3.01e-40 | 141 |
| MS.gene79392.t1 | MTR_3g026330 | 65.289 | 121 | 34 | 3 | 33 | 153 | 225 | 337 | 3.84e-26 | 104 |
| MS.gene79392.t1 | MTR_3g026290 | 62.406 | 266 | 65 | 5 | 1 | 232 | 1 | 265 | 1.76e-75 | 233 |
| MS.gene79392.t1 | MTR_3g026290 | 68.900 | 209 | 55 | 2 | 40 | 239 | 153 | 360 | 7.59e-65 | 205 |
| MS.gene79392.t1 | MTR_3g026290 | 62.585 | 147 | 47 | 3 | 29 | 175 | 215 | 353 | 2.71e-30 | 115 |
| MS.gene79392.t1 | MTR_3g026240 | 52.336 | 107 | 46 | 2 | 1 | 107 | 1 | 102 | 6.20e-24 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79392.t1 | AT5G09530 | 61.818 | 220 | 68 | 4 | 26 | 232 | 30 | 246 | 5.23e-57 | 186 |
| MS.gene79392.t1 | AT5G09530 | 51.128 | 266 | 62 | 5 | 35 | 232 | 100 | 365 | 3.00e-48 | 163 |
| MS.gene79392.t1 | AT5G09530 | 56.771 | 192 | 54 | 5 | 32 | 198 | 179 | 366 | 1.41e-37 | 135 |
| MS.gene79392.t1 | AT5G09530 | 59.341 | 91 | 29 | 2 | 35 | 119 | 282 | 370 | 1.44e-14 | 72.4 |
| MS.gene79392.t1 | AT5G09520 | 45.455 | 143 | 57 | 2 | 7 | 149 | 9 | 130 | 2.44e-24 | 94.4 |
| MS.gene79392.t1 | AT5G09520 | 56.000 | 100 | 34 | 2 | 132 | 231 | 41 | 130 | 2.20e-18 | 79.0 |
| MS.gene79392.t1 | AT5G09520 | 58.000 | 100 | 36 | 2 | 94 | 193 | 37 | 130 | 8.59e-17 | 74.7 |
| MS.gene79392.t1 | AT5G09520 | 54.737 | 95 | 35 | 2 | 110 | 204 | 41 | 127 | 7.28e-16 | 72.0 |
| MS.gene79392.t1 | AT5G09520 | 56.627 | 83 | 32 | 1 | 161 | 239 | 37 | 119 | 3.38e-14 | 67.8 |
Find 81 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGTACCTTTGGTATTTC+TGG | 0.077856 | 3.1:-17035407 | None:intergenic |
| TCAGGTATCTTTGAAATTTC+TGG | 0.104685 | 3.1:-17035242 | None:intergenic |
| AGCTCAGGTTTGGGCAATTC+AGG | 0.197717 | 3.1:-17035194 | None:intergenic |
| GGAACATCTTTAGGAGTTTC+AGG | 0.202854 | 3.1:-17035530 | None:intergenic |
| TCAGGTACCTTAGGCAATTC+TGG | 0.231204 | 3.1:-17035035 | None:intergenic |
| TCAGGTACCTTAGGTAATTC+TGG | 0.242157 | 3.1:-17035068 | None:intergenic |
| TTAGGAGTTTCAGGGAATTT+AGG | 0.242346 | 3.1:-17035521 | None:intergenic |
| AACTCTAGCTTTGGTAATTC+AGG | 0.247874 | 3.1:-17035425 | None:intergenic |
| AATTCTGGCTTTGGCAATTC+AGG | 0.265103 | 3.1:-17035053 | None:intergenic |
| GACTTTAGGTAGCTCAGGTT+TGG | 0.265600 | 3.1:-17035204 | None:intergenic |
| AGTTCAGGCTTTGTCAATTC+AGG | 0.281138 | 3.1:-17035458 | None:intergenic |
| TCAGGTACCTTAGGGATATC+TGG | 0.288152 | 3.1:-17035341 | None:intergenic |
| TTAGGTAATTCAGGAATCTT+AGG | 0.302765 | 3.1:-17035011 | None:intergenic |
| ATAGACAATTCGGGGACTTT+AGG | 0.311738 | 3.1:-17035218 | None:intergenic |
| AGTATAGCTAGAATCATTAA+TGG | 0.316206 | 3.1:-17034882 | None:intergenic |
| AGCTCAGACTTTGGAAGTTC+AGG | 0.317949 | 3.1:-17035086 | None:intergenic |
| TTTGTCAATTCAGGTATCTT+AGG | 0.317967 | 3.1:-17035449 | None:intergenic |
| TACCTTTGGTATTTCTGGCT+TGG | 0.319635 | 3.1:-17035402 | None:intergenic |
| AATTTAGGTAACTCGGGTTT+TGG | 0.322053 | 3.1:-17035506 | None:intergenic |
| TTTGGCAATTCAGGTACTTT+AGG | 0.325312 | 3.1:-17035284 | None:intergenic |
| ACCTTTGGTATTTCTGGCTT+GGG | 0.325986 | 3.1:-17035401 | None:intergenic |
| GTATTGGTTGGAACATCTTT+AGG | 0.328990 | 3.1:-17035539 | None:intergenic |
| TTAGGCAACTCGGGAACTTT+AGG | 0.329308 | 3.1:-17035167 | None:intergenic |
| ACCATAGGTAGTTCATGTTT+TGG | 0.332450 | 3.1:-17035302 | None:intergenic |
| TACCTTAGGGATATCTGGTT+TGG | 0.332667 | 3.1:-17035336 | None:intergenic |
| TTTGGTAATTCAGGTACCTT+AGG | 0.339853 | 3.1:-17035350 | None:intergenic |
| ACTTTGGGAAACTCGGGTTT+TGG | 0.341260 | 3.1:-17035134 | None:intergenic |
| AACTTAGGTAGCTCAGACTT+TGG | 0.349422 | 3.1:-17035095 | None:intergenic |
| ACTTTAGGTAGCTCGGGTTT+TGG | 0.353287 | 3.1:-17035269 | None:intergenic |
| ATAGGTGGAAAATCAAGTTT+TGG | 0.353325 | 3.1:-17034972 | None:intergenic |
| TTTAGGCAACTCGGGAACTT+TGG | 0.361526 | 3.1:-17035150 | None:intergenic |
| TTAGGCAACTCGGGAACTTT+GGG | 0.361579 | 3.1:-17035149 | None:intergenic |
| ACTTTAGGTAGCTCAGGTTT+GGG | 0.365399 | 3.1:-17035203 | None:intergenic |
| AATTTCTGGCATAGACAATT+CGG | 0.365865 | 3.1:-17035228 | None:intergenic |
| ACCTTAGGTAATTCTGGCTT+TGG | 0.366886 | 3.1:-17035062 | None:intergenic |
| TTGGGCAACTCAGAGACTTT+TGG | 0.369313 | 3.1:-17035383 | None:intergenic |
| ACATTAACTTTAGGTAGTTC+AGG | 0.370017 | 3.1:-17035473 | None:intergenic |
| GGAAGCTCAGGCTTTGGTAT+AGG | 0.376080 | 3.1:-17034990 | None:intergenic |
| AATTCTGGCTTAGGTAATTC+AGG | 0.380278 | 3.1:-17035020 | None:intergenic |
| AGTTCAGGGACATTAACTTT+AGG | 0.387475 | 3.1:-17035482 | None:intergenic |
| CTCGGGAACTTTGGGAAACT+CGG | 0.388765 | 3.1:-17035141 | None:intergenic |
| ATCTTAGGAAGCTCAGGCTT+TGG | 0.394512 | 3.1:-17034996 | None:intergenic |
| ATTTCTGGCATAGACAATTC+GGG | 0.397522 | 3.1:-17035227 | None:intergenic |
| TTTGGTAATTCAGGTACCTT+TGG | 0.399783 | 3.1:-17035416 | None:intergenic |
| TTTGGAAGTTCAGGTACCTT+AGG | 0.416878 | 3.1:-17035077 | None:intergenic |
| ACCTTAGGGATATCTGGTTT+GGG | 0.423518 | 3.1:-17035335 | None:intergenic |
| TTCAGGTACTTTAGGTAGCT+CGG | 0.423548 | 3.1:-17035276 | None:intergenic |
| ATCTTAGGTAACTCTAGCTT+TGG | 0.432161 | 3.1:-17035434 | None:intergenic |
| AGAGTATTACAATGGTTGTC+GGG | 0.433887 | 3.1:+17034913 | MS.gene79392:CDS |
| AGTTCCAACTTAAGGAGTAT+TGG | 0.438613 | 3.1:-17035555 | None:intergenic |
| TTTGGCAATTCAGGTACCTT+AGG | 0.442441 | 3.1:-17035044 | None:intergenic |
| TCAGGAATCTTAGGAAGCTC+AGG | 0.453881 | 3.1:-17035002 | None:intergenic |
| ACCTTAGGCAATTCTGGCTT+AGG | 0.463421 | 3.1:-17035029 | None:intergenic |
| GCCAAAACATGAACTACCTA+TGG | 0.466545 | 3.1:+17035301 | MS.gene79392:CDS |
| TCGGGGACTTTAGGTAGCTC+AGG | 0.467048 | 3.1:-17035209 | None:intergenic |
| TTGGGCAATTCAGGGAACTT+AGG | 0.475381 | 3.1:-17035185 | None:intergenic |
| TTCAGGGAATTTAGGTAACT+CGG | 0.478958 | 3.1:-17035513 | None:intergenic |
| CTCGGGAACTTTAGGCAACT+CGG | 0.481382 | 3.1:-17035159 | None:intergenic |
| AATTCAGGAACATTAAACTT+AGG | 0.490699 | 3.1:-17035110 | None:intergenic |
| TCAGGTACTTTAGGTAGCTC+GGG | 0.491125 | 3.1:-17035275 | None:intergenic |
| TTGGTAATTCAGGTACCTTA+GGG | 0.494321 | 3.1:-17035349 | None:intergenic |
| GAACATCTTTAGGAGTTTCA+GGG | 0.495266 | 3.1:-17035529 | None:intergenic |
| TTCAGGGAACTTAGGCAACT+CGG | 0.499436 | 3.1:-17035177 | None:intergenic |
| TGATAAATTGATGTAAGTCA+TGG | 0.504655 | 3.1:-17034847 | None:intergenic |
| AAGAGTATTACAATGGTTGT+CGG | 0.514321 | 3.1:+17034912 | MS.gene79392:CDS |
| TCGGGAACTTTGGGAAACTC+GGG | 0.521735 | 3.1:-17035140 | None:intergenic |
| GCTCAGGTTTGGGCAATTCA+GGG | 0.523757 | 3.1:-17035193 | None:intergenic |
| CCAACTTAAGGAGTATTGGT+TGG | 0.525013 | 3.1:-17035551 | None:intergenic |
| AGCTCAGGCTTTGGTATAGG+TGG | 0.530445 | 3.1:-17034987 | None:intergenic |
| TCAGGGAATTTAGGTAACTC+GGG | 0.549724 | 3.1:-17035512 | None:intergenic |
| TCGGGAACTTTAGGCAACTC+GGG | 0.569457 | 3.1:-17035158 | None:intergenic |
| TCAGGGAACTTAGGCAACTC+GGG | 0.582113 | 3.1:-17035176 | None:intergenic |
| TTTCTGGCATAGACAATTCG+GGG | 0.596116 | 3.1:-17035226 | None:intergenic |
| GCCAAAGCCAGAATTACCTA+AGG | 0.599842 | 3.1:+17035061 | MS.gene79392:CDS |
| ACCTAAGCCAGAATTGCCTA+AGG | 0.603337 | 3.1:+17035028 | MS.gene79392:CDS |
| TTGGGCAACTCAGAGACCAT+AGG | 0.618309 | 3.1:-17035317 | None:intergenic |
| GAGTATTACAATGGTTGTCG+GGG | 0.633099 | 3.1:+17034914 | MS.gene79392:CDS |
| GTCAGCAAAGAGTATTACAA+TGG | 0.649491 | 3.1:+17034905 | MS.gene79392:CDS |
| GCCCAAACCAGATATCCCTA+AGG | 0.649847 | 3.1:+17035334 | MS.gene79392:CDS |
| GCCCAAGCCAGAAATACCAA+AGG | 0.675655 | 3.1:+17035400 | MS.gene79392:CDS |
| TCTAGAGTCGAACATACCTG+AGG | 0.701502 | 3.1:+17034947 | MS.gene79392:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATTCAGGAACATTAAACTT+AGG | - | chr3.1:17035113-17035132 | None:intergenic | 25.0% |
| ! | AGTATAGCTAGAATCATTAA+TGG | - | chr3.1:17034885-17034904 | None:intergenic | 25.0% |
| ACATTAACTTTAGGTAGTTC+AGG | - | chr3.1:17035476-17035495 | None:intergenic | 30.0% | |
| TTAGGTAATTCAGGAATCTT+AGG | - | chr3.1:17035014-17035033 | None:intergenic | 30.0% | |
| TTTGTCAATTCAGGTATCTT+AGG | - | chr3.1:17035452-17035471 | None:intergenic | 30.0% | |
| ! | ATAGGTGGAAAATCAAGTTT+TGG | - | chr3.1:17034975-17034994 | None:intergenic | 30.0% |
| !! | AAGAGTATTACAATGGTTGT+CGG | + | chr3.1:17034912-17034931 | MS.gene79392:CDS | 30.0% |
| !! | AATTTCTGGCATAGACAATT+CGG | - | chr3.1:17035231-17035250 | None:intergenic | 30.0% |
| !! | TCAGGTATCTTTGAAATTTC+TGG | - | chr3.1:17035245-17035264 | None:intergenic | 30.0% |
| AGTTCAGGGACATTAACTTT+AGG | - | chr3.1:17035485-17035504 | None:intergenic | 35.0% | |
| TTAGGAGTTTCAGGGAATTT+AGG | - | chr3.1:17035524-17035543 | None:intergenic | 35.0% | |
| TTCAGGGAATTTAGGTAACT+CGG | - | chr3.1:17035516-17035535 | None:intergenic | 35.0% | |
| TTTGGCAATTCAGGTACTTT+AGG | - | chr3.1:17035287-17035306 | None:intergenic | 35.0% | |
| ! | AATTTAGGTAACTCGGGTTT+TGG | - | chr3.1:17035509-17035528 | None:intergenic | 35.0% |
| ! | ACCATAGGTAGTTCATGTTT+TGG | - | chr3.1:17035305-17035324 | None:intergenic | 35.0% |
| ! | AGAGTATTACAATGGTTGTC+GGG | + | chr3.1:17034913-17034932 | MS.gene79392:CDS | 35.0% |
| ! | ATCTTAGGTAACTCTAGCTT+TGG | - | chr3.1:17035437-17035456 | None:intergenic | 35.0% |
| ! | GAACATCTTTAGGAGTTTCA+GGG | - | chr3.1:17035532-17035551 | None:intergenic | 35.0% |
| ! | TTGGTAATTCAGGTACCTTA+GGG | - | chr3.1:17035352-17035371 | None:intergenic | 35.0% |
| ! | TTTGGTAATTCAGGTACCTT+AGG | - | chr3.1:17035353-17035372 | None:intergenic | 35.0% |
| ! | TTTGGTAATTCAGGTACCTT+TGG | - | chr3.1:17035353-17035372 | None:intergenic | 35.0% |
| !! | AACTCTAGCTTTGGTAATTC+AGG | - | chr3.1:17035428-17035447 | None:intergenic | 35.0% |
| !! | AATTCTGGCTTAGGTAATTC+AGG | - | chr3.1:17035023-17035042 | None:intergenic | 35.0% |
| !! | ATTTCTGGCATAGACAATTC+GGG | - | chr3.1:17035230-17035249 | None:intergenic | 35.0% |
| !! | GTATTGGTTGGAACATCTTT+AGG | - | chr3.1:17035542-17035561 | None:intergenic | 35.0% |
| !! | GTCAGCAAAGAGTATTACAA+TGG | + | chr3.1:17034905-17034924 | MS.gene79392:CDS | 35.0% |
| !!! | AAATCAAGTTTTGGAACCTC+AGG | - | chr3.1:17034966-17034985 | None:intergenic | 35.0% |
| !!! | AGTTCATGTTTTGGCAATTC+AGG | - | chr3.1:17035296-17035315 | None:intergenic | 35.0% |
| AACTTAGGTAGCTCAGACTT+TGG | - | chr3.1:17035098-17035117 | None:intergenic | 40.0% | |
| ACTTTAGGTAGCTCAGGTTT+GGG | - | chr3.1:17035206-17035225 | None:intergenic | 40.0% | |
| ATAGACAATTCGGGGACTTT+AGG | - | chr3.1:17035221-17035240 | None:intergenic | 40.0% | |
| GAGTATTACAATGGTTGTCG+GGG | + | chr3.1:17034914-17034933 | MS.gene79392:CDS | 40.0% | |
| GCCAAAACATGAACTACCTA+TGG | + | chr3.1:17035301-17035320 | MS.gene79392:CDS | 40.0% | |
| TACCTTAGGGATATCTGGTT+TGG | - | chr3.1:17035339-17035358 | None:intergenic | 40.0% | |
| TCAGGGAATTTAGGTAACTC+GGG | - | chr3.1:17035515-17035534 | None:intergenic | 40.0% | |
| TCAGGTACCTTAGGTAATTC+TGG | - | chr3.1:17035071-17035090 | None:intergenic | 40.0% | |
| TCAGGTACCTTTGGTATTTC+TGG | - | chr3.1:17035410-17035429 | None:intergenic | 40.0% | |
| TTCAGGTACTTTAGGTAGCT+CGG | - | chr3.1:17035279-17035298 | None:intergenic | 40.0% | |
| TTTGGAAGTTCAGGTACCTT+AGG | - | chr3.1:17035080-17035099 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGTACCTT+AGG | - | chr3.1:17035047-17035066 | None:intergenic | 40.0% | |
| ! | ACCTTAGGGATATCTGGTTT+GGG | - | chr3.1:17035338-17035357 | None:intergenic | 40.0% |
| ! | AGTTCAGGCTTTGTCAATTC+AGG | - | chr3.1:17035461-17035480 | None:intergenic | 40.0% |
| ! | GGAACATCTTTAGGAGTTTC+AGG | - | chr3.1:17035533-17035552 | None:intergenic | 40.0% |
| ! | TTTCTGGCATAGACAATTCG+GGG | - | chr3.1:17035229-17035248 | None:intergenic | 40.0% |
| !! | AATTCTGGCTTTGGCAATTC+AGG | - | chr3.1:17035056-17035075 | None:intergenic | 40.0% |
| !! | ACCTTAGGTAATTCTGGCTT+TGG | - | chr3.1:17035065-17035084 | None:intergenic | 40.0% |
| !! | ACCTTTGGTATTTCTGGCTT+GGG | - | chr3.1:17035404-17035423 | None:intergenic | 40.0% |
| !! | TACCTTTGGTATTTCTGGCT+TGG | - | chr3.1:17035405-17035424 | None:intergenic | 40.0% |
| ACCTAAGCCAGAATTGCCTA+AGG | + | chr3.1:17035028-17035047 | MS.gene79392:CDS | 45.0% | |
| ATCTTAGGAAGCTCAGGCTT+TGG | - | chr3.1:17034999-17035018 | None:intergenic | 45.0% | |
| GACTTTAGGTAGCTCAGGTT+TGG | - | chr3.1:17035207-17035226 | None:intergenic | 45.0% | |
| GCCAAAGCCAGAATTACCTA+AGG | + | chr3.1:17035061-17035080 | MS.gene79392:CDS | 45.0% | |
| TCAGGAATCTTAGGAAGCTC+AGG | - | chr3.1:17035005-17035024 | None:intergenic | 45.0% | |
| TCAGGTACCTTAGGCAATTC+TGG | - | chr3.1:17035038-17035057 | None:intergenic | 45.0% | |
| TCAGGTACCTTAGGGATATC+TGG | - | chr3.1:17035344-17035363 | None:intergenic | 45.0% | |
| TCAGGTACTTTAGGTAGCTC+GGG | - | chr3.1:17035278-17035297 | None:intergenic | 45.0% | |
| TTAGGCAACTCGGGAACTTT+AGG | - | chr3.1:17035152-17035171 | None:intergenic | 45.0% | |
| TTAGGCAACTCGGGAACTTT+GGG | - | chr3.1:17035152-17035171 | None:intergenic | 45.0% | |
| TTCAGGGAACTTAGGCAACT+CGG | - | chr3.1:17035180-17035199 | None:intergenic | 45.0% | |
| TTGGGCAATTCAGGGAACTT+AGG | - | chr3.1:17035188-17035207 | None:intergenic | 45.0% | |
| TTTAGGCAACTCGGGAACTT+TGG | - | chr3.1:17035153-17035172 | None:intergenic | 45.0% | |
| ! | ACTTTAGGTAGCTCGGGTTT+TGG | - | chr3.1:17035272-17035291 | None:intergenic | 45.0% |
| ! | AGCTCAGACTTTGGAAGTTC+AGG | - | chr3.1:17035089-17035108 | None:intergenic | 45.0% |
| ! | TCTAGAGTCGAACATACCTG+AGG | + | chr3.1:17034947-17034966 | MS.gene79392:CDS | 45.0% |
| ! | TTGGGCAACTCAGAGACTTT+TGG | - | chr3.1:17035386-17035405 | None:intergenic | 45.0% |
| !! | AACTCGGGTTTTGGCAATTC+AGG | - | chr3.1:17035128-17035147 | None:intergenic | 45.0% |
| !! | ACCTTAGGCAATTCTGGCTT+AGG | - | chr3.1:17035032-17035051 | None:intergenic | 45.0% |
| !! | ACTTTGGGAAACTCGGGTTT+TGG | - | chr3.1:17035137-17035156 | None:intergenic | 45.0% |
| !! | ACTTTTGGTAGCTCGGGTTT+TGG | - | chr3.1:17035371-17035390 | None:intergenic | 45.0% |
| !! | AGCTCGGGTTTTGGTAATTC+AGG | - | chr3.1:17035362-17035381 | None:intergenic | 45.0% |
| !! | CTCAGAGACTTTTGGTAGCT+CGG | - | chr3.1:17035378-17035397 | None:intergenic | 45.0% |
| !! | TCAGAGACTTTTGGTAGCTC+GGG | - | chr3.1:17035377-17035396 | None:intergenic | 45.0% |
| AGCTCAGGTTTGGGCAATTC+AGG | - | chr3.1:17035197-17035216 | None:intergenic | 50.0% | |
| CTCGGGAACTTTAGGCAACT+CGG | - | chr3.1:17035162-17035181 | None:intergenic | 50.0% | |
| GCCCAAACCAGATATCCCTA+AGG | + | chr3.1:17035334-17035353 | MS.gene79392:CDS | 50.0% | |
| GCCCAAGCCAGAAATACCAA+AGG | + | chr3.1:17035400-17035419 | MS.gene79392:CDS | 50.0% | |
| GCTCAGGTTTGGGCAATTCA+GGG | - | chr3.1:17035196-17035215 | None:intergenic | 50.0% | |
| TCAGGGAACTTAGGCAACTC+GGG | - | chr3.1:17035179-17035198 | None:intergenic | 50.0% | |
| TCGGGAACTTTAGGCAACTC+GGG | - | chr3.1:17035161-17035180 | None:intergenic | 50.0% | |
| TTGGGCAACTCAGAGACCAT+AGG | - | chr3.1:17035320-17035339 | None:intergenic | 50.0% | |
| ! | AGCTCAGGCTTTGGTATAGG+TGG | - | chr3.1:17034990-17035009 | None:intergenic | 50.0% |
| ! | CTCGGGAACTTTGGGAAACT+CGG | - | chr3.1:17035144-17035163 | None:intergenic | 50.0% |
| ! | GGAAGCTCAGGCTTTGGTAT+AGG | - | chr3.1:17034993-17035012 | None:intergenic | 50.0% |
| ! | TCGGGAACTTTGGGAAACTC+GGG | - | chr3.1:17035143-17035162 | None:intergenic | 50.0% |
| !! | AACTCGGGTTTTGGCAGTTC+AGG | - | chr3.1:17035500-17035519 | None:intergenic | 50.0% |
| !! | ACTCGGGTTTTGGCAGTTCA+GGG | - | chr3.1:17035499-17035518 | None:intergenic | 50.0% |
| !! | AGCTCGGGTTTTGGCAATTC+AGG | - | chr3.1:17035263-17035282 | None:intergenic | 50.0% |
| TCGGGGACTTTAGGTAGCTC+AGG | - | chr3.1:17035212-17035231 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 17034849 | 17035568 | 17034849 | ID=MS.gene79392 |
| chr3.1 | mRNA | 17034849 | 17035568 | 17034849 | ID=MS.gene79392.t1;Parent=MS.gene79392 |
| chr3.1 | exon | 17034849 | 17035568 | 17034849 | ID=MS.gene79392.t1.exon1;Parent=MS.gene79392.t1 |
| chr3.1 | CDS | 17034849 | 17035568 | 17034849 | ID=cds.MS.gene79392.t1;Parent=MS.gene79392.t1 |
| Gene Sequence |
| Protein sequence |
