AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79577

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79577.t1 MTR_7g010820 96.907 582 18 0 7 588 2 583 0.0 1168
MS.gene79577.t1 MTR_4g098800 70.847 590 157 5 4 590 9 586 0.0 845
MS.gene79577.t1 MTR_4g098800 70.558 591 159 5 3 590 73 651 0.0 844
MS.gene79577.t1 MTR_5g014150 68.367 588 179 4 2 586 15 598 0.0 811
MS.gene79577.t1 MTR_1g116930 59.253 589 219 8 3 589 1 570 0.0 687
MS.gene79577.t1 MTR_7g005930 59.511 573 213 6 23 593 27 582 0.0 671
MS.gene79577.t1 MTR_7g013270 60.526 570 204 7 23 588 82 634 0.0 657
MS.gene79577.t1 MTR_7g067010 46.609 575 293 6 10 581 3 566 4.52e-171 498
MS.gene79577.t1 MTR_3g462710 45.061 577 303 10 9 581 2 568 5.06e-166 485
MS.gene79577.t1 MTR_4g015080 45.172 580 302 9 2 577 5 572 6.43e-166 485
MS.gene79577.t1 MTR_4g024930 46.287 579 277 8 2 576 7 555 2.53e-160 471
MS.gene79577.t1 MTR_3g112460 39.033 579 322 8 17 591 9 560 7.85e-143 426
MS.gene79577.t1 MTR_7g098200 37.610 569 338 6 12 575 10 566 9.55e-140 419
MS.gene79577.t1 MTR_3g112470 38.687 579 324 8 17 591 9 560 2.16e-139 417
MS.gene79577.t1 MTR_7g098160 36.577 596 355 7 4 594 6 583 3.43e-139 417
MS.gene79577.t1 MTR_3g112450 38.664 569 327 6 10 574 2 552 1.07e-137 413
MS.gene79577.t1 MTR_1g075440 37.221 583 349 6 12 589 9 579 1.02e-136 411
MS.gene79577.t1 MTR_7g098200 37.434 569 329 7 12 575 10 556 1.60e-135 408
MS.gene79577.t1 MTR_1g042310 37.411 564 340 5 15 575 10 563 5.42e-134 404
MS.gene79577.t1 MTR_7g098180 37.564 583 346 6 12 588 12 582 1.56e-133 403
MS.gene79577.t1 MTR_7g098040 36.049 577 352 6 4 575 7 571 6.84e-133 402
MS.gene79577.t1 MTR_5g012270 38.687 579 332 8 21 590 19 583 2.72e-131 397
MS.gene79577.t1 MTR_7g098090 36.411 574 343 7 12 575 14 575 6.30e-131 397
MS.gene79577.t1 MTR_5g012290 39.016 569 329 5 15 575 11 569 5.21e-130 394
MS.gene79577.t1 MTR_7g098230 36.911 531 318 6 50 575 45 563 3.13e-129 392
MS.gene79577.t1 MTR_3g462710 44.350 469 247 10 117 581 1 459 1.07e-128 385
MS.gene79577.t1 MTR_4g101380 38.567 586 341 10 15 589 11 588 4.33e-127 386
MS.gene79577.t1 MTR_3g069500 36.301 584 348 7 10 590 14 576 5.02e-127 385
MS.gene79577.t1 MTR_1g042310 37.618 529 317 5 50 575 1 519 9.94e-126 381
MS.gene79577.t1 MTR_7g065080 36.879 564 336 7 17 579 17 561 1.48e-125 382
MS.gene79577.t1 MTR_1g042310 37.618 529 317 5 50 575 8 526 1.68e-125 381
MS.gene79577.t1 MTR_7g098220 37.133 579 347 6 15 588 14 580 3.77e-124 379
MS.gene79577.t1 MTR_4g019580 35.789 570 352 6 17 585 22 578 8.03e-124 378
MS.gene79577.t1 MTR_3g069440 35.678 583 357 8 17 594 19 588 8.64e-124 377
MS.gene79577.t1 MTR_1g041815 35.816 564 348 5 15 575 11 563 7.84e-123 375
MS.gene79577.t1 MTR_1g041875 35.963 545 329 5 15 556 13 540 8.06e-123 375
MS.gene79577.t1 MTR_1g041835 35.816 564 348 5 15 575 11 563 6.28e-122 372
MS.gene79577.t1 MTR_1g041885 37.305 512 301 5 50 558 1 495 9.59e-119 363
MS.gene79577.t1 MTR_3g072300 36.145 581 348 9 12 585 5 569 2.48e-118 363
MS.gene79577.t1 MTR_5g085850 37.543 586 336 8 8 588 7 567 2.49e-118 363
MS.gene79577.t1 MTR_5g055000 36.538 572 342 10 28 588 15 576 1.48e-117 361
MS.gene79577.t1 MTR_3g005010 37.610 569 311 10 15 577 14 544 1.97e-117 360
MS.gene79577.t1 MTR_7g098220 37.500 544 323 6 50 588 5 536 7.19e-117 358
MS.gene79577.t1 MTR_3g069420 33.221 593 384 6 2 593 5 586 2.18e-115 356
MS.gene79577.t1 MTR_4g033325 36.696 575 331 10 4 575 4 548 6.68e-115 353
MS.gene79577.t1 MTR_4g114340 38.062 578 337 9 3 577 1 560 6.98e-115 354
MS.gene79577.t1 MTR_0294s0020 36.760 574 330 11 5 575 5 548 2.81e-114 352
MS.gene79577.t1 MTR_3g014790 34.783 575 328 9 21 577 3 548 9.98e-112 345
MS.gene79577.t1 MTR_4g033330 36.898 561 315 12 5 558 5 533 1.60e-110 341
MS.gene79577.t1 MTR_4g033315 36.585 574 333 13 5 575 5 550 3.23e-110 342
MS.gene79577.t1 MTR_4g033310 36.585 574 333 13 5 575 5 550 3.23e-110 342
MS.gene79577.t1 MTR_4g033375 38.142 506 284 10 16 518 17 496 2.46e-108 335
MS.gene79577.t1 MTR_7g098200 37.310 461 272 6 120 575 4 452 2.57e-108 334
MS.gene79577.t1 MTR_7g006540 35.366 574 354 7 30 591 62 630 2.75e-107 336
MS.gene79577.t1 MTR_2g017750 33.615 592 380 10 10 590 12 601 9.20e-106 331
MS.gene79577.t1 MTR_7g065080 36.864 491 290 7 90 579 3 474 1.81e-105 327
MS.gene79577.t1 MTR_8g038880 35.377 571 328 8 31 589 20 561 2.93e-105 329
MS.gene79577.t1 MTR_2g005130 34.991 563 338 7 16 575 25 562 1.97e-104 327
MS.gene79577.t1 MTR_7g098150 36.404 456 274 5 4 454 6 450 4.19e-104 323
MS.gene79577.t1 MTR_7g088825 33.450 571 363 10 29 593 20 579 4.30e-103 324
MS.gene79577.t1 MTR_4g033395 36.275 510 288 10 16 518 17 496 4.55e-102 318
MS.gene79577.t1 MTR_1g085090 32.007 578 364 8 17 590 3 555 2.66e-101 320
MS.gene79577.t1 MTR_4g107530 33.989 559 354 7 35 584 37 589 1.00e-100 318
MS.gene79577.t1 MTR_4g107580 32.799 561 365 6 35 590 28 581 9.14e-100 316
MS.gene79577.t1 MTR_4g123537 35.273 550 334 8 29 575 39 569 3.66e-99 315
MS.gene79577.t1 MTR_4g107510 32.321 560 370 6 21 575 28 583 5.63e-99 313
MS.gene79577.t1 MTR_8g087780 34.256 578 369 8 16 584 6 581 6.50e-99 313
MS.gene79577.t1 MTR_5g038060 32.740 562 361 8 21 575 25 576 1.71e-98 312
MS.gene79577.t1 MTR_7g088790 32.933 583 369 11 2 575 2 571 1.23e-97 310
MS.gene79577.t1 MTR_8g469470 31.016 561 371 6 25 575 26 580 9.87e-97 307
MS.gene79577.t1 MTR_7g088820 32.702 581 371 13 20 593 16 583 2.85e-96 306
MS.gene79577.t1 MTR_5g038380 33.165 594 356 11 10 581 4 578 1.04e-94 302
MS.gene79577.t1 MTR_8g469480 33.029 548 354 7 35 575 42 583 5.86e-94 300
MS.gene79577.t1 MTR_7g111260 31.746 567 355 9 29 592 17 554 1.09e-93 299
MS.gene79577.t1 MTR_3g100980 31.993 572 362 7 25 588 10 562 1.55e-93 298
MS.gene79577.t1 MTR_4g107670 32.598 589 355 13 9 575 2 570 6.32e-93 297
MS.gene79577.t1 MTR_8g469310 33.505 582 352 9 18 582 13 576 2.18e-92 296
MS.gene79577.t1 MTR_8g087810 34.370 579 368 9 16 584 6 582 3.52e-92 295
MS.gene79577.t1 MTR_7g088820 33.333 528 334 12 73 593 5 521 5.89e-92 293
MS.gene79577.t1 MTR_4g033325 38.128 438 247 9 141 575 8 424 8.60e-92 290
MS.gene79577.t1 MTR_4g033325 38.128 438 247 9 141 575 34 450 1.19e-91 290
MS.gene79577.t1 MTR_4g033385 36.758 438 256 9 141 575 32 451 1.44e-87 280
MS.gene79577.t1 MTR_3g100980 30.500 600 362 8 25 588 10 590 2.69e-87 283
MS.gene79577.t1 MTR_5g038190 29.196 572 386 7 16 578 9 570 2.47e-86 280
MS.gene79577.t1 MTR_8g103233 31.393 567 376 9 28 591 14 570 1.56e-82 270
MS.gene79577.t1 MTR_7g088820 33.126 483 307 11 117 593 1 473 5.89e-82 266
MS.gene79577.t1 MTR_1g026740 31.066 544 355 9 41 577 27 557 3.94e-80 263
MS.gene79577.t1 MTR_6g008690 33.273 556 313 12 39 573 15 533 8.46e-78 256
MS.gene79577.t1 MTR_1g026750 30.523 593 381 10 3 588 1 569 2.48e-76 253
MS.gene79577.t1 MTR_1g026770 30.270 555 366 11 41 588 25 565 8.89e-75 249
MS.gene79577.t1 MTR_7g064780 28.819 576 391 7 27 593 22 587 2.32e-74 248
MS.gene79577.t1 MTR_4g107610 30.070 572 379 12 4 566 3 562 7.88e-73 245
MS.gene79577.t1 MTR_2g101640 28.426 591 410 10 7 593 1 582 2.15e-72 244
MS.gene79577.t1 MTR_2g101650 29.674 583 396 11 11 586 1 576 2.49e-72 243
MS.gene79577.t1 MTR_2g101610 29.382 599 398 13 7 593 1 586 6.79e-72 243
MS.gene79577.t1 MTR_2g101590 29.333 600 396 14 7 593 1 585 2.33e-71 242
MS.gene79577.t1 MTR_4g011280 30.387 543 341 12 41 567 42 563 4.90e-71 240
MS.gene79577.t1 MTR_7g098210 29.699 532 277 13 50 575 1 441 1.18e-70 234
MS.gene79577.t1 MTR_1g009200 28.395 567 391 9 29 591 25 580 2.95e-67 229
MS.gene79577.t1 MTR_2g093160 29.809 577 357 13 16 575 1 546 8.77e-67 227
MS.gene79577.t1 MTR_1g057460 29.125 594 373 17 4 589 21 574 1.25e-65 225
MS.gene79577.t1 MTR_7g064800 29.340 576 385 9 27 588 22 589 1.67e-65 225
MS.gene79577.t1 MTR_2g093180 29.931 578 356 11 16 575 1 547 2.60e-64 221
MS.gene79577.t1 MTR_1g057460 30.099 505 315 12 90 589 32 503 7.87e-63 216
MS.gene79577.t1 MTR_2g093640 29.369 555 355 9 30 575 20 546 2.33e-62 215
MS.gene79577.t1 MTR_7g051830 30.919 566 345 13 10 573 4 525 9.54e-61 211
MS.gene79577.t1 MTR_2g101560 28.571 602 399 14 7 593 1 586 8.41e-60 210
MS.gene79577.t1 MTR_7g052600 30.769 559 341 12 17 573 11 525 1.08e-59 207
MS.gene79577.t1 MTR_0236s0050 29.505 505 318 12 90 589 32 503 1.36e-59 207
MS.gene79577.t1 MTR_7g051880 28.873 568 354 13 10 573 4 525 2.15e-59 207
MS.gene79577.t1 MTR_4g033310 38.365 318 170 11 263 575 190 486 6.88e-57 199
MS.gene79577.t1 MTR_4g033310 34.694 196 117 2 5 200 5 189 7.38e-29 120
MS.gene79577.t1 MTR_1g009170 24.816 407 251 9 152 555 3 357 1.88e-28 117
MS.gene79577.t1 MTR_3g065350 32.530 166 104 1 342 507 1 158 2.51e-26 105
MS.gene79577.t1 MTR_4g033390 33.333 96 62 2 490 585 30 123 3.57e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79577.t1 AT1G32450 68.509 597 175 6 1 591 10 599 0.0 829
MS.gene79577.t1 AT4G21680 69.640 583 168 6 3 581 1 578 0.0 801
MS.gene79577.t1 AT5G19640 61.441 555 190 5 32 584 60 592 0.0 674
MS.gene79577.t1 AT3G54140 44.696 575 306 7 9 580 2 567 8.18e-174 505
MS.gene79577.t1 AT3G54140 44.696 575 306 7 9 580 2 567 8.18e-174 505
MS.gene79577.t1 AT2G02040 42.535 576 322 5 4 577 14 582 2.35e-163 479
MS.gene79577.t1 AT5G01180 42.734 578 318 7 7 581 1 568 1.59e-162 476
MS.gene79577.t1 AT5G01180 42.734 578 318 7 7 581 1 568 1.59e-162 476
MS.gene79577.t1 AT5G01180 42.734 578 318 7 7 581 1 568 1.59e-162 476
MS.gene79577.t1 AT1G62200 41.828 569 312 6 4 566 22 577 1.77e-155 459
MS.gene79577.t1 AT1G62200 39.967 598 311 7 4 566 22 606 1.08e-149 445
MS.gene79577.t1 AT1G62200 39.967 598 311 7 4 566 36 620 1.89e-149 445
MS.gene79577.t1 AT2G02020 39.410 576 301 6 4 577 15 544 4.40e-144 428
MS.gene79577.t1 AT2G26690 39.100 578 332 9 15 588 8 569 2.08e-127 386
MS.gene79577.t1 AT2G02020 36.806 576 295 9 4 577 15 523 5.60e-124 376
MS.gene79577.t1 AT3G54450 36.077 571 329 10 28 587 8 553 9.55e-122 371
MS.gene79577.t1 AT2G37900 35.106 564 349 6 16 579 23 569 2.29e-121 371
MS.gene79577.t1 AT3G53960 34.242 587 364 6 16 591 22 597 5.11e-120 368
MS.gene79577.t1 AT2G26690 39.595 543 308 9 50 588 10 536 5.12e-120 366
MS.gene79577.t1 AT5G46050 35.929 565 346 7 15 575 11 563 5.51e-120 367
MS.gene79577.t1 AT2G26690 39.703 539 305 9 54 588 2 524 1.19e-119 365
MS.gene79577.t1 AT5G46040 34.596 581 362 8 15 589 11 579 1.41e-118 364
MS.gene79577.t1 AT1G12110 36.395 577 350 6 21 590 17 583 1.00e-117 362
MS.gene79577.t1 AT3G21670 36.667 570 326 10 17 575 12 557 1.44e-110 343
MS.gene79577.t1 AT1G68570 36.192 583 348 10 23 594 17 586 1.60e-110 343
MS.gene79577.t1 AT5G13400 35.788 584 355 9 20 594 52 624 5.04e-110 343
MS.gene79577.t1 AT1G68570 36.655 562 334 9 44 594 6 556 5.23e-110 341
MS.gene79577.t1 AT2G40460 35.552 571 340 10 12 575 5 554 4.40e-109 339
MS.gene79577.t1 AT1G22540 37.276 558 321 9 19 573 18 549 1.12e-107 335
MS.gene79577.t1 AT1G69870 33.741 572 368 7 28 594 48 613 2.73e-106 333
MS.gene79577.t1 AT1G72140 34.276 566 327 9 19 575 22 551 4.09e-106 331
MS.gene79577.t1 AT2G37900 34.783 506 313 6 74 579 2 490 3.13e-105 327
MS.gene79577.t1 AT1G59740 33.851 579 361 9 17 588 27 590 1.75e-103 325
MS.gene79577.t1 AT1G72130 36.926 566 299 11 23 577 16 534 1.29e-100 316
MS.gene79577.t1 AT1G22550 35.304 575 332 12 15 577 14 560 2.88e-99 313
MS.gene79577.t1 AT1G72125 35.461 564 336 11 19 577 17 557 6.54e-98 310
MS.gene79577.t1 AT1G72120 34.574 564 337 10 19 577 17 553 4.03e-97 307
MS.gene79577.t1 AT1G33440 35.752 565 334 9 17 573 24 567 2.94e-95 304
MS.gene79577.t1 AT5G46050 36.285 463 279 7 117 575 1 451 4.91e-94 296
MS.gene79577.t1 AT1G18880 32.727 550 354 9 35 575 23 565 5.26e-94 300
MS.gene79577.t1 AT1G22570 32.818 582 356 10 10 579 5 563 5.58e-93 297
MS.gene79577.t1 AT5G62680 31.095 566 379 7 35 594 47 607 4.13e-91 293
MS.gene79577.t1 AT1G69850 32.414 580 373 7 10 575 4 578 3.55e-89 288
MS.gene79577.t1 AT1G27080 32.981 567 359 9 29 591 12 561 1.27e-88 286
MS.gene79577.t1 AT1G22570 33.147 537 328 9 51 579 13 526 1.66e-87 281
MS.gene79577.t1 AT5G14940 31.507 584 342 12 29 591 5 551 5.88e-87 281
MS.gene79577.t1 AT3G47960 30.700 557 373 8 35 585 65 614 7.02e-86 280
MS.gene79577.t1 AT1G27040 31.937 573 375 5 6 576 2 561 1.08e-85 278
MS.gene79577.t1 AT1G27040 32.099 567 370 5 12 576 4 557 1.58e-85 277
MS.gene79577.t1 AT5G62730 29.899 592 367 10 5 580 30 589 1.49e-82 270
MS.gene79577.t1 AT1G27080 32.836 536 339 9 60 591 1 519 1.53e-82 269
MS.gene79577.t1 AT1G27040 32.519 532 344 5 47 576 11 529 4.30e-81 265
MS.gene79577.t1 AT1G72130 36.854 445 239 9 143 577 4 416 5.05e-80 258
MS.gene79577.t1 AT1G72130 36.854 445 239 9 143 577 4 416 5.05e-80 258
MS.gene79577.t1 AT3G01350 30.877 570 345 8 40 585 16 560 3.92e-79 260
MS.gene79577.t1 AT5G62730 30.179 560 343 10 37 580 3 530 9.33e-77 253
MS.gene79577.t1 AT3G16180 28.993 576 384 12 25 590 16 576 1.51e-75 252
MS.gene79577.t1 AT1G52190 28.439 538 366 9 41 567 31 560 8.56e-74 248
MS.gene79577.t1 AT3G45710 26.876 573 388 8 22 593 14 556 3.49e-70 237
MS.gene79577.t1 AT3G25260 28.339 554 347 9 21 573 11 515 5.13e-70 235
MS.gene79577.t1 AT3G45680 27.257 576 388 9 17 589 8 555 2.32e-68 232
MS.gene79577.t1 AT1G69860 29.562 548 364 6 35 578 22 551 2.56e-68 231
MS.gene79577.t1 AT3G45650 27.241 580 386 10 15 588 6 555 2.76e-68 231
MS.gene79577.t1 AT3G45720 26.987 541 367 9 53 591 41 555 1.64e-67 229
MS.gene79577.t1 AT5G28470 26.998 563 393 8 25 581 11 561 2.60e-65 224
MS.gene79577.t1 AT3G45660 27.839 546 358 10 49 588 39 554 3.16e-65 223
MS.gene79577.t1 AT3G45660 27.839 546 358 10 49 588 39 554 3.16e-65 223
MS.gene79577.t1 AT3G45660 27.839 546 358 10 49 588 60 575 6.35e-65 223
MS.gene79577.t1 AT3G45650 26.238 606 385 11 15 588 6 581 9.31e-64 220
MS.gene79577.t1 AT5G28470 26.821 563 392 9 25 581 11 559 1.74e-62 216
MS.gene79577.t1 AT3G45700 25.088 570 394 8 21 589 8 545 4.71e-62 214
MS.gene79577.t1 AT3G25280 27.128 564 347 16 21 573 11 521 8.45e-56 197
MS.gene79577.t1 AT3G45690 25.277 542 335 12 49 587 36 510 2.73e-51 184
MS.gene79577.t1 AT2G38100 23.933 539 362 12 59 590 2 499 2.76e-34 137
MS.gene79577.t1 AT2G38100 24.000 550 369 13 49 591 9 516 4.56e-34 136
MS.gene79577.t1 AT2G38100 23.679 549 372 12 49 591 15 522 4.78e-34 136
MS.gene79577.t1 AT5G11570 28.627 255 167 4 315 567 229 470 3.48e-26 112
MS.gene79577.t1 AT5G11570 31.944 216 140 4 41 253 23 234 4.16e-24 106

Find 114 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATCTGCTTTAAATCTTT+TGG 0.175899 7.3:+87286120 None:intergenic
GTTTACATCTTCTCTCTTCT+TGG 0.208407 7.3:-87287826 MS.gene79577:CDS
CTAGTTCATTGTCGATATTT+TGG 0.229657 7.3:-87285669 MS.gene79577:CDS
TATTAAGATTACTTCCAATT+TGG 0.232752 7.3:-87286035 MS.gene79577:CDS
CTTTCCTTAGTGACTCTTAT+TGG 0.253324 7.3:-87287801 MS.gene79577:CDS
CACAAAGATGACTTGGAAAA+TGG 0.258789 7.3:+87287759 None:intergenic
AATATAGTGCATAGCCAAAT+TGG 0.266451 7.3:+87286021 None:intergenic
TTTCCTTAGTGACTCTTATT+GGG 0.266964 7.3:-87287800 MS.gene79577:CDS
TGTACCACACACAAGGATTT+AGG 0.290459 7.3:-87286602 MS.gene79577:intron
TCCTAAGGCTACTAGATAAA+TGG 0.292386 7.3:+87287019 None:intergenic
ATAAATATTTCAGGACAAAA+TGG 0.312133 7.3:-87288955 None:intergenic
TGCAGGAGGGATATGAAAAT+TGG 0.324134 7.3:+87285927 None:intergenic
GAACTTAAACATGGGACATT+TGG 0.326049 7.3:-87285428 MS.gene79577:CDS
TGATCCACAAGGTAATTCTT+TGG 0.330246 7.3:+87287076 None:intergenic
GGCATGCTTGGTTGGATTCC+AGG 0.333777 7.3:-87285451 MS.gene79577:CDS
AGAACTGGAACTTGGTTTGC+AGG 0.334798 7.3:-87288852 MS.gene79577:CDS
TGTATGACTTCAATATCATT+AGG 0.345321 7.3:-87285532 MS.gene79577:CDS
CTACTTGTGTCACAGTTGAT+AGG 0.345592 7.3:+87286073 None:intergenic
GTTGAAGAGTGTTTATCTAA+TGG 0.346259 7.3:-87286636 MS.gene79577:CDS
CAACCTAACATTGCTACATT+TGG 0.350494 7.3:-87286984 MS.gene79577:CDS
TATAAATATGTTAAATTTCA+AGG 0.350933 7.3:-87285334 MS.gene79577:CDS
TTGAAGCTCCGTGATACCTT+TGG 0.354351 7.3:+87285810 None:intergenic
GTACCGCAATATGTACTAAT+AGG 0.359209 7.3:-87285643 MS.gene79577:CDS
TCAAAGCTTGACATGCTTGC+AGG 0.361856 7.3:+87285910 None:intergenic
TTTCATGTATGTTGGTCAAT+TGG 0.368808 7.3:-87285608 MS.gene79577:CDS
ACTCTTCTCAAACACCATAT+TGG 0.370740 7.3:-87286871 MS.gene79577:CDS
CCTGATGGATTGAAGAGCTT+TGG 0.373551 7.3:-87285565 MS.gene79577:CDS
ATCTTCAAAATAGTCCAATA+TGG 0.384719 7.3:+87286857 None:intergenic
TTGTTGCAGCAATAAGAAAA+TGG 0.394125 7.3:-87286698 MS.gene79577:CDS
GATGAGGGACTATGGACTTT+GGG 0.398437 7.3:-87286837 MS.gene79577:CDS
GCACCAAATGTAGCAATGTT+AGG 0.407357 7.3:+87286981 None:intergenic
CTCTGTGGTCTTCAGTCAAA+TGG 0.426560 7.3:-87285995 MS.gene79577:CDS
CACAACCATTTGGCTTCAAT+AGG 0.430672 7.3:+87287102 None:intergenic
TGTCCCATGTTTAAGTTCCC+TGG 0.431807 7.3:+87285433 None:intergenic
TCTTTGGACCCACAACCATT+TGG 0.432330 7.3:+87287092 None:intergenic
TTCGAGAGAGAACTGGAACT+TGG 0.433022 7.3:-87288860 MS.gene79577:CDS
TATAGATACTTTAAACCTGC+TGG 0.434208 7.3:-87286750 MS.gene79577:CDS
TATCTAGTAGCCTTAGGAAA+TGG 0.436717 7.3:-87287014 MS.gene79577:CDS
CCTGCTGTTCGAGAGAGAAC+TGG 0.440510 7.3:-87288867 MS.gene79577:CDS
CTCGAGGTTTGCACATTGGA+TGG 0.444437 7.3:-87288912 MS.gene79577:CDS
AGATGAGGGACTATGGACTT+TGG 0.448427 7.3:-87286838 MS.gene79577:CDS
TCAAATGGCATCACTCTTTG+TGG 0.451020 7.3:-87285980 MS.gene79577:CDS
CCAAAGCTCTTCAATCCATC+AGG 0.464327 7.3:+87285565 None:intergenic
TGGTTCTGCTGCCCTAGCAT+TGG 0.467038 7.3:-87286799 MS.gene79577:CDS
AGGCGAAGATAAACTTTATG+AGG 0.468002 7.3:-87286658 MS.gene79577:CDS
CTATTGAAGCCAAATGGTTG+TGG 0.473171 7.3:-87287101 MS.gene79577:CDS
AAGATATCAACTAGAAATGA+AGG 0.473301 7.3:-87285472 MS.gene79577:CDS
CTGCAGTGAGTGCTGCTAAG+AGG 0.473539 7.3:+87285392 None:intergenic
CCAGTTCTCTCTCGAACAGC+AGG 0.474623 7.3:+87288867 None:intergenic
GAAGAGTGTTTATCTAATGG+AGG 0.475298 7.3:-87286633 MS.gene79577:CDS
CTGCTGGAAACCCTCTTCCT+AGG 0.482735 7.3:-87286734 MS.gene79577:CDS
TTTCCTTCATCTTCATCTAT+CGG 0.483360 7.3:-87285873 MS.gene79577:CDS
ATATTCCTATTGAAGCCAAA+TGG 0.485401 7.3:-87287107 MS.gene79577:CDS
ACCAAAAGATTTAAAGCAGA+TGG 0.486800 7.3:-87286121 MS.gene79577:CDS
ATGCTAGAGTTGCCAACCCT+TGG 0.487154 7.3:+87287947 None:intergenic
AACAATGTGAGCAAGTGGAC+AGG 0.488294 7.3:-87287853 MS.gene79577:CDS
TCCATTTATCTAGTAGCCTT+AGG 0.491646 7.3:-87287020 MS.gene79577:CDS
ATCATAGCAATGGTTTCAGC+AGG 0.494050 7.3:-87285760 MS.gene79577:CDS
ACTAGAAATGAAGGCATGCT+TGG 0.498208 7.3:-87285463 MS.gene79577:CDS
GAAATGAAGGCATGCTTGGT+TGG 0.507707 7.3:-87285459 MS.gene79577:CDS
GGCATTAGTGAACCAAGGGT+TGG 0.509768 7.3:-87287959 MS.gene79577:intron
TATTGAAGCCAAATGGTTGT+GGG 0.515070 7.3:-87287100 MS.gene79577:CDS
CTAGGAAGAGGGTTTCCAGC+AGG 0.518077 7.3:+87286735 None:intergenic
TTCTATGTGACAGGGTTTGG+TGG 0.518870 7.3:-87287150 MS.gene79577:intron
AAGGTATCACGGAGCTTCAA+AGG 0.520249 7.3:-87285807 MS.gene79577:CDS
TTCCCCAATAAGAGTCACTA+AGG 0.520883 7.3:+87287797 None:intergenic
ACACTCTACACATAAAGCTC+TGG 0.524331 7.3:+87285277 None:intergenic
TTGATATCCTCCATTTCCTA+AGG 0.525360 7.3:+87287004 None:intergenic
AAAGAAACAAAACCAATGCT+AGG 0.529942 7.3:+87286787 None:intergenic
GCATGCTTGGTTGGATTCCA+GGG 0.534078 7.3:-87285450 MS.gene79577:CDS
GAACTGGAACTTGGTTTGCA+GGG 0.535045 7.3:-87288851 MS.gene79577:CDS
TTCAATTCACAAGCACCTGA+TGG 0.536588 7.3:-87285580 MS.gene79577:CDS
GAGCTTCAAAGGATGGGAAT+CGG 0.537511 7.3:-87285796 MS.gene79577:CDS
GGAGCTCGAGGTTTGCACAT+TGG 0.540921 7.3:-87288916 MS.gene79577:CDS
CCATTGCAATATAGACTACA+AGG 0.541318 7.3:+87285365 None:intergenic
ACTTGACAAAACCTAGGAAG+AGG 0.545629 7.3:+87286723 None:intergenic
TAAACATGGGACATTTGGAT+AGG 0.549379 7.3:-87285423 MS.gene79577:CDS
TTACAATCACAAAGATGACT+TGG 0.555708 7.3:+87287752 None:intergenic
TATCACGGAGCTTCAAAGGA+TGG 0.559645 7.3:-87285803 MS.gene79577:CDS
GCATCACTCTTTGTGGAACA+AGG 0.563672 7.3:-87285973 MS.gene79577:CDS
AGTATTAGCAATCATAGCAA+TGG 0.565482 7.3:-87285770 MS.gene79577:CDS
ATCACGGAGCTTCAAAGGAT+GGG 0.566161 7.3:-87285802 MS.gene79577:CDS
TTCCTTAGTGACTCTTATTG+GGG 0.567551 7.3:-87287799 MS.gene79577:CDS
TCTCCGATAGATGAAGATGA+AGG 0.574939 7.3:+87285870 None:intergenic
ATTCCAGGGAACTTAAACAT+GGG 0.577247 7.3:-87285436 MS.gene79577:CDS
AATGAAATCCAAAGGTATCA+CGG 0.577592 7.3:-87285818 MS.gene79577:CDS
AAGAAAATAAATGCAGTCCA+TGG 0.582775 7.3:-87286098 MS.gene79577:CDS
AAGAGTGTTTATCTAATGGA+GGG 0.586747 7.3:-87286632 MS.gene79577:CDS
CTTGACAAAACCTAGGAAGA+GGG 0.589955 7.3:+87286724 None:intergenic
CTGCAAACAATGTGAGCAAG+TGG 0.589984 7.3:-87287858 MS.gene79577:CDS
CTAGTAGCCTTAGGAAATGG+AGG 0.594221 7.3:-87287011 MS.gene79577:CDS
TGTGGAACAAGGTGCTGCAA+TGG 0.595250 7.3:-87285962 MS.gene79577:CDS
CCTTGTAGTCTATATTGCAA+TGG 0.597420 7.3:-87285365 MS.gene79577:CDS
AAGCTTGACATGCTTGCAGG+AGG 0.599138 7.3:+87285913 None:intergenic
TGCAGCAATAAGAAAATGGA+AGG 0.599680 7.3:-87286694 MS.gene79577:CDS
AGCTTGACATGCTTGCAGGA+GGG 0.603779 7.3:+87285914 None:intergenic
AAGAAACAAAACCAATGCTA+GGG 0.607762 7.3:+87286788 None:intergenic
GATTCCAGGGAACTTAAACA+TGG 0.610003 7.3:-87285437 MS.gene79577:CDS
AAAATTGTAGCCGTTGCGAA+GGG 0.612540 7.3:-87285693 MS.gene79577:CDS
TGGAAGGTCAAAATGTTCGA+AGG 0.623695 7.3:-87286678 MS.gene79577:CDS
TAGTCTATATTGCAATGGCT+AGG 0.624517 7.3:-87285360 MS.gene79577:CDS
ATGCACTATATTATTCTCTG+TGG 0.626107 7.3:-87286010 MS.gene79577:CDS
ACAAGTGAACAAGGAGCTCG+AGG 0.633588 7.3:-87288928 MS.gene79577:CDS
ACAATGTGAGCAAGTGGACA+GGG 0.634092 7.3:-87287852 MS.gene79577:CDS
GGGTCCAAAGAATTACCTTG+TGG 0.636025 7.3:-87287080 MS.gene79577:CDS
ATGAACTAGTCCCTTCGCAA+CGG 0.647000 7.3:+87285683 None:intergenic
GTCACAGTTGATAGGAACCA+TGG 0.647390 7.3:+87286081 None:intergenic
AGATTTAAAATGAAATCCAA+AGG 0.648112 7.3:-87285826 MS.gene79577:CDS
AATGGAGAAACAAGTGAACA+AGG 0.649738 7.3:-87288937 MS.gene79577:CDS
TCTATATTGCAATGGCTAGG+TGG 0.651956 7.3:-87285357 MS.gene79577:CDS
GCTCCTATTAGTACATATTG+CGG 0.670504 7.3:+87285640 None:intergenic
CTTACCTAAATCCTTGTGTG+TGG 0.675525 7.3:+87286598 None:intergenic
TATGATGAATGTGATCCACA+AGG 0.710482 7.3:+87287065 None:intergenic
GATGGATCTATTGATAGACA+CGG 0.738265 7.3:-87288894 MS.gene79577:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAATTAATTAAAAA+CGG - chr7.3:87286645-87286664 MS.gene79577:CDS 0.0%
!! TATAAATATGTTAAATTTCA+AGG - chr7.3:87288890-87288909 MS.gene79577:CDS 10.0%
!!! ATTTTTTAGCTATTTTTATT+TGG - chr7.3:87287314-87287333 MS.gene79577:intron 10.0%
!!! GTTTATTTTAAATTTTAAGT+TGG - chr7.3:87285626-87285645 MS.gene79577:CDS 10.0%
!!! TATTAATTAATGTTGAATTT+TGG - chr7.3:87286244-87286263 MS.gene79577:intron 10.0%
!!! TTAAAACTTTTAAAACATAA+AGG + chr7.3:87286073-87286054 None:intergenic 10.0%
!!! TTTCTTTTTTAAACAATATA+TGG + chr7.3:87286939-87286958 None:intergenic 10.0%
!! AAGTAAAATACAAACAAATA+TGG - chr7.3:87287711-87287730 MS.gene79577:intron 15.0%
!! CAAACAAAAAAAAACAATAT+GGG - chr7.3:87285903-87285922 MS.gene79577:CDS 15.0%
!! TCAAACAAAAAAAAACAATA+TGG - chr7.3:87285902-87285921 MS.gene79577:CDS 15.0%
!! TTTGATTGTTTAAACAATAT+GGG - chr7.3:87285752-87285771 MS.gene79577:CDS 15.0%
!!! AAATATACCAAATTTTAGTT+TGG + chr7.3:87286715-87286734 None:intergenic 15.0%
!!! ATGTTTTAAAAGTTTTAAGT+TGG + chr7.3:87285674-87285655 None:intergenic 15.0%
!!! CTTAAAACTTTTAAAACATA+AGG - chr7.3:87286053-87286072 MS.gene79577:CDS 15.0%
!!! TATGTTTTAAGTAATTTTGT+TGG - chr7.3:87286520-87286539 MS.gene79577:intron 15.0%
!!! TTAAGTTTGACTTTAAAATA+AGG + chr7.3:87286761-87286780 None:intergenic 15.0%
!!! TTATTTTAAAGTCAAACTTA+AGG - chr7.3:87286760-87286779 MS.gene79577:CDS 15.0%
!! AAAATGATTAATTGCATGTT+TGG - chr7.3:87285595-87285614 MS.gene79577:CDS 20.0%
!! AGCTACTAATTAGAAAAAAT+GGG - chr7.3:87286580-87286599 MS.gene79577:intron 20.0%
!! ATATCATTGTGTTACATATA+CGG + chr7.3:87287838-87287857 None:intergenic 20.0%
!! CAAAATATTACAAAAACAAG+CGG + chr7.3:87285788-87285807 None:intergenic 20.0%
!! CTTTGATTGTTTAAACAATA+TGG - chr7.3:87285751-87285770 MS.gene79577:CDS 20.0%
!! TAGCTACTAATTAGAAAAAA+TGG - chr7.3:87286579-87286598 MS.gene79577:intron 20.0%
!! TATTAAGATTACTTCCAATT+TGG - chr7.3:87288189-87288208 MS.gene79577:intron 20.0%
!! TTAAAAAAGAAAGACATGAT+GGG - chr7.3:87286947-87286966 MS.gene79577:CDS 20.0%
!! TTTAAAAAAGAAAGACATGA+TGG - chr7.3:87286946-87286965 MS.gene79577:CDS 20.0%
!! TTTATAAAATTTGTATTCCC+AGG + chr7.3:87286218-87286237 None:intergenic 20.0%
!! TTTGTTTGAAGAAACAAAAT+TGG + chr7.3:87285891-87285910 None:intergenic 20.0%
!!! AGATTTAAAATGAAATCCAA+AGG - chr7.3:87288398-87288417 MS.gene79577:intron 20.0%
!!! GAATTTAAACTAATTTTGCT+AGG - chr7.3:87288054-87288073 MS.gene79577:intron 20.0%
!!! TCATATATAGTTTTAAATCG+AGG + chr7.3:87287808-87287827 None:intergenic 20.0%
! AACAATTAAGTCACTATACA+AGG - chr7.3:87286186-87286205 MS.gene79577:intron 25.0%
! AAGATATCAACTAGAAATGA+AGG - chr7.3:87288752-87288771 MS.gene79577:intron 25.0%
! ACAATTAAGTCACTATACAA+GGG - chr7.3:87286187-87286206 MS.gene79577:intron 25.0%
! AGGGATATAAAAAGAGAATA+AGG - chr7.3:87286981-87287000 MS.gene79577:CDS 25.0%
! ATCTTCAAAATAGTCCAATA+TGG + chr7.3:87287370-87287389 None:intergenic 25.0%
! CAATCAAAGAAAATAAGAGA+CGG + chr7.3:87285740-87285759 None:intergenic 25.0%
! GGGATATAAAAAGAGAATAA+GGG - chr7.3:87286982-87287001 MS.gene79577:CDS 25.0%
! GTATATATAGTCAAGATCAT+AGG - chr7.3:87287919-87287938 MS.gene79577:CDS 25.0%
! GTCTCAGTATTGTTTAAAAA+AGG - chr7.3:87286847-87286866 MS.gene79577:CDS 25.0%
! TAATAATGTTCTATGTGACA+GGG - chr7.3:87287066-87287085 MS.gene79577:CDS 25.0%
! TGTATGACTTCAATATCATT+AGG - chr7.3:87288692-87288711 MS.gene79577:intron 25.0%
! TTAATAATGTTCTATGTGAC+AGG - chr7.3:87287065-87287084 MS.gene79577:CDS 25.0%
!! ATTAAAAACGGGAAATTTTG+AGG - chr7.3:87286657-87286676 MS.gene79577:CDS 25.0%
!! TATTCTCTTTTTATATCCCT+CGG + chr7.3:87286981-87287000 None:intergenic 25.0%
!! TTGATCGTTATGTTTTGTAT+AGG - chr7.3:87288001-87288020 MS.gene79577:intron 25.0%
!!! ATGTTTTGACAATTTCAAGT+TGG - chr7.3:87285684-87285703 MS.gene79577:CDS 25.0%
!!! CGCTTGTTTTTGTAATATTT+TGG - chr7.3:87285786-87285805 MS.gene79577:CDS 25.0%
!!! TTTTATTTGGCTTTGAACAT+TGG - chr7.3:87287327-87287346 MS.gene79577:intron 25.0%
AAAAGGGCCAAACTAAAATT+TGG - chr7.3:87286705-87286724 MS.gene79577:CDS 30.0%
AAAGAAACAAAACCAATGCT+AGG + chr7.3:87287440-87287459 None:intergenic 30.0%
AAGAAAATAAATGCAGTCCA+TGG - chr7.3:87288126-87288145 MS.gene79577:intron 30.0%
AAGAAACAAAACCAATGCTA+GGG + chr7.3:87287439-87287458 None:intergenic 30.0%
AATATAGTGCATAGCCAAAT+TGG + chr7.3:87288206-87288225 None:intergenic 30.0%
ACAAAAACTTGACAAAACCT+AGG + chr7.3:87287510-87287529 None:intergenic 30.0%
ACCAATTAAGTCACTATACA+AGG - chr7.3:87286108-87286127 MS.gene79577:CDS 30.0%
ACCATATAAAATATGGTCGA+TGG + chr7.3:87286873-87286892 None:intergenic 30.0%
ACTATACAAGGGAAATATCT+TGG - chr7.3:87286120-87286139 MS.gene79577:CDS 30.0%
ACTTAATATTATGTCGCGTA+AGG - chr7.3:87285992-87286011 MS.gene79577:CDS 30.0%
AGTATTAGCAATCATAGCAA+TGG - chr7.3:87288454-87288473 MS.gene79577:intron 30.0%
ATATTCCTATTGAAGCCAAA+TGG - chr7.3:87287117-87287136 MS.gene79577:CDS 30.0%
ATGCACTATATTATTCTCTG+TGG - chr7.3:87288214-87288233 MS.gene79577:intron 30.0%
CCAATTAAGTCACTATACAA+GGG - chr7.3:87286109-87286128 MS.gene79577:CDS 30.0%
CTCTCACACCATATAAAATA+TGG + chr7.3:87286880-87286899 None:intergenic 30.0%
CTTAATATTATGTCGCGTAA+GGG - chr7.3:87285993-87286012 MS.gene79577:CDS 30.0%
TATAGATACTTTAAACCTGC+TGG - chr7.3:87287474-87287493 MS.gene79577:intron 30.0%
TTACAATCACAAAGATGACT+TGG + chr7.3:87286475-87286494 None:intergenic 30.0%
TTGATATCACTAGAGATGTA+TGG + chr7.3:87286166-87286185 None:intergenic 30.0%
TTGTTGCAGCAATAAGAAAA+TGG - chr7.3:87287526-87287545 MS.gene79577:intron 30.0%
TTTCATGTATGTTGGTCAAT+TGG - chr7.3:87288616-87288635 MS.gene79577:intron 30.0%
TTTCCTTAGTGACTCTTATT+GGG - chr7.3:87286424-87286443 MS.gene79577:intron 30.0%
TTTCCTTCATCTTCATCTAT+CGG - chr7.3:87288351-87288370 MS.gene79577:intron 30.0%
! ACCAAAAGATTTAAAGCAGA+TGG - chr7.3:87288103-87288122 MS.gene79577:intron 30.0%
! ATTTTAAATCTCGCAACAAG+AGG + chr7.3:87288389-87288408 None:intergenic 30.0%
! ATTTTATATGGTGTGAGAGT+AGG - chr7.3:87286881-87286900 MS.gene79577:CDS 30.0%
! CTAGTTCATTGTCGATATTT+TGG - chr7.3:87288555-87288574 MS.gene79577:intron 30.0%
! TCAGAAGTTTTCATGTATGT+TGG - chr7.3:87288608-87288627 MS.gene79577:intron 30.0%
! TGATGATGAAATGTCACTAA+TGG - chr7.3:87288032-87288051 MS.gene79577:intron 30.0%
! TTTTAAATCTCGCAACAAGA+GGG + chr7.3:87288388-87288407 None:intergenic 30.0%
!! AAGAGTGTTTATCTAATGGA+GGG - chr7.3:87287592-87287611 MS.gene79577:intron 30.0%
!! AATGAAATCCAAAGGTATCA+CGG - chr7.3:87288406-87288425 MS.gene79577:intron 30.0%
!! ATTGGACTATTTTGAAGATG+AGG - chr7.3:87287371-87287390 MS.gene79577:intron 30.0%
!! GTTGAAGAGTGTTTATCTAA+TGG - chr7.3:87287588-87287607 MS.gene79577:intron 30.0%
!! TCCATCTGCTTTAAATCTTT+TGG + chr7.3:87288107-87288126 None:intergenic 30.0%
!! TTGGACTATTTTGAAGATGA+GGG - chr7.3:87287372-87287391 MS.gene79577:intron 30.0%
!!! ACTATTTTTGACAAGAGTGA+TGG - chr7.3:87286325-87286344 MS.gene79577:intron 30.0%
!!! ATTTTTGAGTGTTGTTCACT+AGG + chr7.3:87287291-87287310 None:intergenic 30.0%
!!! CTATTTTTGACAAGAGTGAT+GGG - chr7.3:87286326-87286345 MS.gene79577:intron 30.0%
!!! TTTGCAGGGATTTTGATTTT+AGG - chr7.3:87285387-87285406 MS.gene79577:CDS 30.0%
!!! TTTTTGAGTGTTGTTCACTA+GGG + chr7.3:87287290-87287309 None:intergenic 30.0%
AAACGCATCACAAATGCAAT+TGG + chr7.3:87287748-87287767 None:intergenic 35.0%
AATGGAGAAACAAGTGAACA+AGG - chr7.3:87285287-87285306 MS.gene79577:CDS 35.0%
ACTATACAAGGGAAATACCT+GGG - chr7.3:87286198-87286217 MS.gene79577:intron 35.0%
ACTCTTCTCAAACACCATAT+TGG - chr7.3:87287353-87287372 MS.gene79577:intron 35.0%
AGAAAAATGTACCACACACA+AGG - chr7.3:87287615-87287634 MS.gene79577:intron 35.0%
AGGCGAAGATAAACTTTATG+AGG - chr7.3:87287566-87287585 MS.gene79577:intron 35.0%
ATTCCAGGGAACTTAAACAT+GGG - chr7.3:87288788-87288807 MS.gene79577:intron 35.0%
CAACCTAACATTGCTACATT+TGG - chr7.3:87287240-87287259 MS.gene79577:intron 35.0%
CCATTGCAATATAGACTACA+AGG + chr7.3:87288862-87288881 None:intergenic 35.0%
CCCTTGTATAGTGACTTAAT+TGG + chr7.3:87286112-87286131 None:intergenic 35.0%
CCTTGTAGTCTATATTGCAA+TGG - chr7.3:87288859-87288878 MS.gene79577:CDS 35.0%
CTTTCCTTAGTGACTCTTAT+TGG - chr7.3:87286423-87286442 MS.gene79577:intron 35.0%
GAACTTAAACATGGGACATT+TGG - chr7.3:87288796-87288815 MS.gene79577:intron 35.0%
GATGGATCTATTGATAGACA+CGG - chr7.3:87285330-87285349 MS.gene79577:CDS 35.0%
GCTCCTATTAGTACATATTG+CGG + chr7.3:87288587-87288606 None:intergenic 35.0%
GTACCGCAATATGTACTAAT+AGG - chr7.3:87288581-87288600 MS.gene79577:intron 35.0%
GTTTACATCTTCTCTCTTCT+TGG - chr7.3:87286398-87286417 MS.gene79577:intron 35.0%
TAAACAATACTGAGACCCTT+CGG + chr7.3:87286843-87286862 None:intergenic 35.0%
TAAACATGGGACATTTGGAT+AGG - chr7.3:87288801-87288820 MS.gene79577:intron 35.0%
TAGTCTATATTGCAATGGCT+AGG - chr7.3:87288864-87288883 MS.gene79577:CDS 35.0%
TATGATGAATGTGATCCACA+AGG + chr7.3:87287162-87287181 None:intergenic 35.0%
TATTGAAGCCAAATGGTTGT+GGG - chr7.3:87287124-87287143 MS.gene79577:CDS 35.0%
TCCATTTATCTAGTAGCCTT+AGG - chr7.3:87287204-87287223 MS.gene79577:intron 35.0%
TCCTAAGGCTACTAGATAAA+TGG + chr7.3:87287208-87287227 None:intergenic 35.0%
TGATCCACAAGGTAATTCTT+TGG + chr7.3:87287151-87287170 None:intergenic 35.0%
TGCAGCAATAAGAAAATGGA+AGG - chr7.3:87287530-87287549 MS.gene79577:intron 35.0%
TTCCTTAGTGACTCTTATTG+GGG - chr7.3:87286425-87286444 MS.gene79577:intron 35.0%
TTGATATCCTCCATTTCCTA+AGG + chr7.3:87287223-87287242 None:intergenic 35.0%
! AAATCCAGAGCTTTATGTGT+AGG - chr7.3:87288943-87288962 MS.gene79577:CDS 35.0%
! ATGATGGGAAATAAAACCGA+GGG - chr7.3:87286962-87286981 MS.gene79577:CDS 35.0%
! CACAAAGATGACTTGGAAAA+TGG + chr7.3:87286468-87286487 None:intergenic 35.0%
! CTTTTATCGCATACTTTAGC+CGG + chr7.3:87288505-87288524 None:intergenic 35.0%
! GCCATCGACCATATTTTATA+TGG - chr7.3:87286869-87286888 MS.gene79577:CDS 35.0%
! TATCTAGTAGCCTTAGGAAA+TGG - chr7.3:87287210-87287229 MS.gene79577:intron 35.0%
! TTCTAACGTGGATAACGTTT+TGG - chr7.3:87286025-87286044 MS.gene79577:CDS 35.0%
! TTTTCACGAGCACAAAAAGA+TGG + chr7.3:87287045-87287064 None:intergenic 35.0%
! TTTTGGCATTAGTGAACCAA+GGG - chr7.3:87286261-87286280 MS.gene79577:intron 35.0%
!! ATTTTGAAGATGAGGGACTA+TGG - chr7.3:87287379-87287398 MS.gene79577:intron 35.0%
!! ATTTTGGCATTAGTGAACCA+AGG - chr7.3:87286260-87286279 MS.gene79577:intron 35.0%
!! CAGGATTAGTAGAGATTTTC+CGG - chr7.3:87288483-87288502 MS.gene79577:intron 35.0%
!! GAAGAGTGTTTATCTAATGG+AGG - chr7.3:87287591-87287610 MS.gene79577:intron 35.0%
!!! AACTCTAGCATTTTTTGGTG+TGG - chr7.3:87286289-87286308 MS.gene79577:intron 35.0%
!!! ACTCTAGCATTTTTTGGTGT+GGG - chr7.3:87286290-87286309 MS.gene79577:intron 35.0%
!!! GCATTGGTTTTGTTTCTTTG+TGG - chr7.3:87287441-87287460 MS.gene79577:intron 35.0%
!!! TTGGCAACTCTAGCATTTTT+TGG - chr7.3:87286284-87286303 MS.gene79577:intron 35.0%
AAAAATTGTAGCCGTTGCGA+AGG - chr7.3:87288530-87288549 MS.gene79577:intron 40.0%
AAAATTGTAGCCGTTGCGAA+GGG - chr7.3:87288531-87288550 MS.gene79577:intron 40.0%
ACCATCATACACAATCCGAA+GGG - chr7.3:87286825-87286844 MS.gene79577:CDS 40.0%
ACTTGACAAAACCTAGGAAG+AGG + chr7.3:87287504-87287523 None:intergenic 40.0%
AGCGTATGAGTGAAAAAGAC+TGG - chr7.3:87286787-87286806 MS.gene79577:CDS 40.0%
ATCATAGCAATGGTTTCAGC+AGG - chr7.3:87288464-87288483 MS.gene79577:intron 40.0%
ATGTTCTATGTGACAGGGTT+TGG - chr7.3:87287071-87287090 MS.gene79577:CDS 40.0%
CACTATACAAGGGAAATACC+TGG - chr7.3:87286197-87286216 MS.gene79577:intron 40.0%
CTACTTGTGTCACAGTTGAT+AGG + chr7.3:87288154-87288173 None:intergenic 40.0%
CTATTGAAGCCAAATGGTTG+TGG - chr7.3:87287123-87287142 MS.gene79577:CDS 40.0%
CTTACCTAAATCCTTGTGTG+TGG + chr7.3:87287629-87287648 None:intergenic 40.0%
CTTGACAAAACCTAGGAAGA+GGG + chr7.3:87287503-87287522 None:intergenic 40.0%
GATTCCAGGGAACTTAAACA+TGG - chr7.3:87288787-87288806 MS.gene79577:intron 40.0%
GCACCAAATGTAGCAATGTT+AGG + chr7.3:87287246-87287265 None:intergenic 40.0%
GGGACTAACTTATTCTAACG+TGG - chr7.3:87286013-87286032 MS.gene79577:CDS 40.0%
TCAAATGGCATCACTCTTTG+TGG - chr7.3:87288244-87288263 MS.gene79577:intron 40.0%
TCTATATTGCAATGGCTAGG+TGG - chr7.3:87288867-87288886 MS.gene79577:CDS 40.0%
TCTCCGATAGATGAAGATGA+AGG + chr7.3:87288357-87288376 None:intergenic 40.0%
TGCAGGAGGGATATGAAAAT+TGG + chr7.3:87288300-87288319 None:intergenic 40.0%
TGGAAGGTCAAAATGTTCGA+AGG - chr7.3:87287546-87287565 MS.gene79577:intron 40.0%
TGTACCACACACAAGGATTT+AGG - chr7.3:87287622-87287641 MS.gene79577:intron 40.0%
TTCAATTCACAAGCACCTGA+TGG - chr7.3:87288644-87288663 MS.gene79577:intron 40.0%
TTCCCCAATAAGAGTCACTA+AGG + chr7.3:87286430-87286449 None:intergenic 40.0%
! ACTAGAAATGAAGGCATGCT+TGG - chr7.3:87288761-87288780 MS.gene79577:intron 40.0%
! CACAACCATTTGGCTTCAAT+AGG + chr7.3:87287125-87287144 None:intergenic 40.0%
! CATGATGGGAAATAAAACCG+AGG - chr7.3:87286961-87286980 MS.gene79577:CDS 40.0%
! TTGGGATTTTGTGTATCAGC+TGG - chr7.3:87287405-87287424 MS.gene79577:intron 40.0%
AACAATGTGAGCAAGTGGAC+AGG - chr7.3:87286371-87286390 MS.gene79577:intron 45.0%
ACAATGTGAGCAAGTGGACA+GGG - chr7.3:87286372-87286391 MS.gene79577:intron 45.0%
ACCCTTCGGATTGTGTATGA+TGG + chr7.3:87286829-87286848 None:intergenic 45.0%
AGATGAGGGACTATGGACTT+TGG - chr7.3:87287386-87287405 MS.gene79577:intron 45.0%
AGCACAAGGCATACCAAAGA+GGG + chr7.3:87285835-87285854 None:intergenic 45.0%
ATCACGGAGCTTCAAAGGAT+GGG - chr7.3:87288422-87288441 MS.gene79577:intron 45.0%
ATGAACTAGTCCCTTCGCAA+CGG + chr7.3:87288544-87288563 None:intergenic 45.0%
CCAAAGCTCTTCAATCCATC+AGG + chr7.3:87288662-87288681 None:intergenic 45.0%
CTCTGTGGTCTTCAGTCAAA+TGG - chr7.3:87288229-87288248 MS.gene79577:intron 45.0%
CTGCAAACAATGTGAGCAAG+TGG - chr7.3:87286366-87286385 MS.gene79577:intron 45.0%
GACCATCATACACAATCCGA+AGG - chr7.3:87286824-87286843 MS.gene79577:CDS 45.0%
GAGCTTCAAAGGATGGGAAT+CGG - chr7.3:87288428-87288447 MS.gene79577:intron 45.0%
GATGAGGGACTATGGACTTT+GGG - chr7.3:87287387-87287406 MS.gene79577:intron 45.0%
GCATCACTCTTTGTGGAACA+AGG - chr7.3:87288251-87288270 MS.gene79577:intron 45.0%
GGGTCCAAAGAATTACCTTG+TGG - chr7.3:87287144-87287163 MS.gene79577:intron 45.0%
TAGCACAAGGCATACCAAAG+AGG + chr7.3:87285836-87285855 None:intergenic 45.0%
TATCACGGAGCTTCAAAGGA+TGG - chr7.3:87288421-87288440 MS.gene79577:intron 45.0%
TCAAAGCTTGACATGCTTGC+AGG + chr7.3:87288317-87288336 None:intergenic 45.0%
TCTTTGGACCCACAACCATT+TGG + chr7.3:87287135-87287154 None:intergenic 45.0%
TGGTATGCCTTGTGCTAAAG+AGG - chr7.3:87285839-87285858 MS.gene79577:CDS 45.0%
TTCGAGAGAGAACTGGAACT+TGG - chr7.3:87285364-87285383 MS.gene79577:CDS 45.0%
TTCTATGTGACAGGGTTTGG+TGG - chr7.3:87287074-87287093 MS.gene79577:CDS 45.0%
TTGAAGCTCCGTGATACCTT+TGG + chr7.3:87288417-87288436 None:intergenic 45.0%
! AAGGTATCACGGAGCTTCAA+AGG - chr7.3:87288417-87288436 MS.gene79577:intron 45.0%
! CTAGTAGCCTTAGGAAATGG+AGG - chr7.3:87287213-87287232 MS.gene79577:intron 45.0%
! GAAATGAAGGCATGCTTGGT+TGG - chr7.3:87288765-87288784 MS.gene79577:intron 45.0%
! TGTCCCATGTTTAAGTTCCC+TGG + chr7.3:87288794-87288813 None:intergenic 45.0%
!! AGAACTGGAACTTGGTTTGC+AGG - chr7.3:87285372-87285391 MS.gene79577:CDS 45.0%
!! CCTGATGGATTGAAGAGCTT+TGG - chr7.3:87288659-87288678 MS.gene79577:intron 45.0%
!! GAACTGGAACTTGGTTTGCA+GGG - chr7.3:87285373-87285392 MS.gene79577:CDS 45.0%
!! GTCACAGTTGATAGGAACCA+TGG + chr7.3:87288146-87288165 None:intergenic 45.0%
!! TTTTGGTGTGGGAGTGAATC+TGG - chr7.3:87286301-87286320 MS.gene79577:intron 45.0%
!! AATTAAAATTAATTAAAAAC+GGG - chr7.3:87286646-87286665 MS.gene79577:CDS 5.0%
!! ATTTGAAAATATAATTTAAA+AGG - chr7.3:87286688-87286707 MS.gene79577:CDS 5.0%
!! TTTGAAAATATAATTTAAAA+GGG - chr7.3:87286689-87286708 MS.gene79577:CDS 5.0%
AAGCTTGACATGCTTGCAGG+AGG + chr7.3:87288314-87288333 None:intergenic 50.0%
ACAAGTGAACAAGGAGCTCG+AGG - chr7.3:87285296-87285315 MS.gene79577:CDS 50.0%
AGAGACGCCTCTTTAGCACA+AGG + chr7.3:87285849-87285868 None:intergenic 50.0%
AGCTTGACATGCTTGCAGGA+GGG + chr7.3:87288313-87288332 None:intergenic 50.0%
ATGCTAGAGTTGCCAACCCT+TGG + chr7.3:87286280-87286299 None:intergenic 50.0%
CTCGAGGTTTGCACATTGGA+TGG - chr7.3:87285312-87285331 MS.gene79577:CDS 50.0%
GCATGCTTGGTTGGATTCCA+GGG - chr7.3:87288774-87288793 MS.gene79577:intron 50.0%
GGCATTAGTGAACCAAGGGT+TGG - chr7.3:87286265-87286284 MS.gene79577:intron 50.0%
GTATTCTTGAGCGCCCTCTT+TGG - chr7.3:87285819-87285838 MS.gene79577:CDS 50.0%
!! TGTGGAACAAGGTGCTGCAA+TGG - chr7.3:87288262-87288281 MS.gene79577:intron 50.0%
CCAGTTCTCTCTCGAACAGC+AGG + chr7.3:87285360-87285379 None:intergenic 55.0%
CCTGCTGTTCGAGAGAGAAC+TGG - chr7.3:87285357-87285376 MS.gene79577:CDS 55.0%
CTAGGAAGAGGGTTTCCAGC+AGG + chr7.3:87287492-87287511 None:intergenic 55.0%
CTGCTGGAAACCCTCTTCCT+AGG - chr7.3:87287490-87287509 MS.gene79577:intron 55.0%
GGAGCTCGAGGTTTGCACAT+TGG - chr7.3:87285308-87285327 MS.gene79577:CDS 55.0%
GGCATGCTTGGTTGGATTCC+AGG - chr7.3:87288773-87288792 MS.gene79577:intron 55.0%
! CTGCAGTGAGTGCTGCTAAG+AGG + chr7.3:87288835-87288854 None:intergenic 55.0%
! TGGTTCTGCTGCCCTAGCAT+TGG - chr7.3:87287425-87287444 MS.gene79577:intron 55.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 87285282 87288964 87285282 ID=MS.gene79577
chr7.3 mRNA 87285282 87288964 87285282 ID=MS.gene79577.t1;Parent=MS.gene79577
chr7.3 exon 87288838 87288964 87288838 ID=MS.gene79577.t1.exon1;Parent=MS.gene79577.t1
chr7.3 CDS 87288838 87288964 87288838 ID=cds.MS.gene79577.t1;Parent=MS.gene79577.t1
chr7.3 exon 87287756 87287973 87287756 ID=MS.gene79577.t1.exon2;Parent=MS.gene79577.t1
chr7.3 CDS 87287756 87287973 87287756 ID=cds.MS.gene79577.t1;Parent=MS.gene79577.t1
chr7.3 exon 87286603 87287159 87286603 ID=MS.gene79577.t1.exon3;Parent=MS.gene79577.t1
chr7.3 CDS 87286603 87287159 87286603 ID=cds.MS.gene79577.t1;Parent=MS.gene79577.t1
chr7.3 exon 87285282 87286170 87285282 ID=MS.gene79577.t1.exon4;Parent=MS.gene79577.t1
chr7.3 CDS 87285282 87286170 87285282 ID=cds.MS.gene79577.t1;Parent=MS.gene79577.t1
Gene Sequence

>MS.gene79577

GACAAAATGGAGAAACAAGTGAACAAGGAGCTCGAGGTTTGCACATTGGATGGATCTATTGATAGACACGGTCATCCTGCTGTTCGAGAGAGAACTGGAACTTGGTTTGCAGGGATTTTGATTTTAGGTAACTCAATTCATCATCACTTACAATATGTAAGAAATTATATTTTAACATATAACTCGTATAAAAACACACAAAATCATCTTAGTTAGATTTATATTTTGTCTTATTAATTAGTTTGACATTCAACTTTCTCTTTCACATGTGTACGCAATCAGAAGTTCATACAATATTATGATTTTGATAACTAAAATGATTAATTGCATGTTTGGTCTCTTGTGTTTATTTTAAATTTTAAGTTGGTCCTTTATGTTTTAAAAGTTTTAAGTTGATCTCTTATGTTTTGACAATTTCAAGTTGGTTCAAAACATTACTCATAAGTTAATCACTTCCGTCTCTTATTTTCTTTGATTGTTTAAACAATATGGGTATCGACTAACCGCTTGTTTTTGTAATATTTTGGCAACTGCTCTGTATTCTTGAGCGCCCTCTTTGGTATGCCTTGTGCTAAAGAGGCGTCTCTGTTTGTATGAATATATATTCCAATTTTGTTTCTTCAAACAAAAAAAAACAATATGGGTGATGAAATTTAACTTATTTAGAAAATCAGTTTTAAAACATTTTTTAAATTTTTTTGTTTTATTAAACTTAATATTATGTCGCGTAAGGGACTAACTTATTCTAACGTGGATAACGTTTTGGACCAACTTAAAACTTTTAAAACATAAGGTACAACTTAAAAACTAAAATAAGCATTAGTGAACCAATTAAGTCACTATACAAGGGAAATATCTTGGAATACAAATTTTATAAATGTCCATACATCTCTAGTGATATCAAAACAATTAAGTCACTATACAAGGGAAATACCTGGGAATACAAATTTTATAAATGTATATATTAATTAATGTTGAATTTTGGCATTAGTGAACCAAGGGTTGGCAACTCTAGCATTTTTTGGTGTGGGAGTGAATCTGGTACTATTTTTGACAAGAGTGATGGGTCAAGATAATGCTGATGCTGCAAACAATGTGAGCAAGTGGACAGGGACAGTTTACATCTTCTCTCTTCTTGGAGCTTTCCTTAGTGACTCTTATTGGGGAAGATACATCACTTGTGCCATTTTCCAAGTCATCTTTGTGATTGTAAGTATAATTAATTACTATATATAGTATATGTTTTAAGTAATTTTGTTGGACATGTGAAAGATATGTGTCAAATTCAAACACTGACTAGCTACTAATTAGAAAAAATGGGCATTTATTTCTCTCATTTTCATAACTCATTATTTTAGTTGAAAAATTAAAATTAATTAAAAACGGGAAATTTTGAGGTAAAAAATATTTGAAAATATAATTTAAAAGGGCCAAACTAAAATTTGGTATATTTAGAAGAATTAAAAACATATTTAACCTTATTTTAAAGTCAAACTTAAGGCATGAGCGTATGAGTGAAAAAGACTGGACATGTGATAGTTAGACCATCATACACAATCCGAAGGGTCTCAGTATTGTTTAAAAAAGGCCATCGACCATATTTTATATGGTGTGAGAGTAGGTTTATGTGTTCAAATAACTTTACATCTTTAAACCATATATTGTTTAAAAAAGAAAGACATGATGGGAAATAAAACCGAGGGATATAAAAAGAGAATAAGGGTCATGCTAACTAGTACTTCGAGATAATATGAATATTTCCATCTTTTTGTGCTCGTGAAAATTAATAATGTTCTATGTGACAGGGTTTGGTGGCATTATCATTGACATCTTACATATTCCTATTGAAGCCAAATGGTTGTGGGTCCAAAGAATTACCTTGTGGATCACATTCATCATATGAAACAACTTTATTCTATGTATCCATTTATCTAGTAGCCTTAGGAAATGGAGGATATCAACCTAACATTGCTACATTTGGTGCTGATCAATTTGATGAAAGTGACCCTAGTGAACAACACTCAAAAATAGCATTTTTTAGCTATTTTTATTTGGCTTTGAACATTGGATCACTCTTCTCAAACACCATATTGGACTATTTTGAAGATGAGGGACTATGGACTTTGGGATTTTGTGTATCAGCTGGTTCTGCTGCCCTAGCATTGGTTTTGTTTCTTTGTGGCACATCAAAATATAGATACTTTAAACCTGCTGGAAACCCTCTTCCTAGGTTTTGTCAAGTTTTTGTTGCAGCAATAAGAAAATGGAAGGTCAAAATGTTCGAAGGCGAAGATAAACTTTATGAGGTTGAAGAGTGTTTATCTAATGGAGGGAGAAAAATGTACCACACACAAGGATTTAGGTAAGTATTTCAATAATTGATTTAAGTTGTTAGTGAAGTTGCAGTTACGCGAAAAAACTTTATGTTGAAGTAAAATACAAACAAATATGGTCGATGCGACTCCAATTGCATTTGTGATGCGTTTGCAATGACATCTAAAATCGTTATAGTATGTTTGTGAACCTCGATTTAAAACTATATATGATTTTAATCCGTATATGTAACACAATGATATGAATTCTCTTATATGATGCTGAAAATGAAAAATCTTGAACATAGAACAATATATCATATATGTATATATAGTCAAGATCATAGGTTGTATAATTGTTATATGATTAATTGCTTAAAATAATTAAATGACTTTATATTTTAGTCTTGATCGTTATGTTTTGTATAGGTTCAATTTTGATGATGAAATGTCACTAATGGAATTTAAACTAATTTTGCTAGGTTTTTAGATAAAGCAGCATTTATCACACCAAAAGATTTAAAGCAGATGGAAGAAAATAAATGCAGTCCATGGTTCCTATCAACTGTGACACAAGTAGAAGAAGTGAAATGCATATTAAGATTACTTCCAATTTGGCTATGCACTATATTATTCTCTGTGGTCTTCAGTCAAATGGCATCACTCTTTGTGGAACAAGGTGCTGCAATGGAGACTAAAATTTCCAATTTTCATATCCCTCCTGCAAGCATGTCAAGCTTTGACATTCTCAGTGTAGTTTCCTTCATCTTCATCTATCGGAGAATTCTCGACCCTCTTGTTGCGAGATTTAAAATGAAATCCAAAGGTATCACGGAGCTTCAAAGGATGGGAATCGGTCTAGTATTAGCAATCATAGCAATGGTTTCAGCAGGATTAGTAGAGATTTTCCGGCTAAAGTATGCGATAAAAGAAGAAAAAAATTGTAGCCGTTGCGAAGGGACTAGTTCATTGTCGATATTTTGGCAAGTACCGCAATATGTACTAATAGGAGCATCAGAAGTTTTCATGTATGTTGGTCAATTGGAGTTTTTCAATTCACAAGCACCTGATGGATTGAAGAGCTTTGGAAGTGCACTTTGTATGACTTCAATATCATTAGGAAACTATGTTAGTAGCTTGCTTGTTGCAATTGTGATGAAGATATCAACTAGAAATGAAGGCATGCTTGGTTGGATTCCAGGGAACTTAAACATGGGACATTTGGATAGGTTTTACTTCCTCTTAGCAGCACTCACTGCAGCTGACCTTGTAGTCTATATTGCAATGGCTAGGTGGTATAAATATGTTAAATTTCAAGGAAACAATATTGAAGAAGAAAACAATGATAAAAATCCAGAGCTTTATGTGTAG
Protein sequence

>MS.gene79577.t1

DKMEKQVNKELEVCTLDGSIDRHGHPAVRERTGTWFAGILILVNQGLATLAFFGVGVNLVLFLTRVMGQDNADAANNVSKWTGTVYIFSLLGAFLSDSYWGRYITCAIFQVIFVIGLVALSLTSYIFLLKPNGCGSKELPCGSHSSYETTLFYVSIYLVALGNGGYQPNIATFGADQFDESDPSEQHSKIAFFSYFYLALNIGSLFSNTILDYFEDEGLWTLGFCVSAGSAALALVLFLCGTSKYRYFKPAGNPLPRFCQVFVAAIRKWKVKMFEGEDKLYEVEECLSNGGRKMYHTQGFRFLDKAAFITPKDLKQMEENKCSPWFLSTVTQVEEVKCILRLLPIWLCTILFSVVFSQMASLFVEQGAAMETKISNFHIPPASMSSFDILSVVSFIFIYRRILDPLVARFKMKSKGITELQRMGIGLVLAIIAMVSAGLVEIFRLKYAIKEEKNCSRCEGTSSLSIFWQVPQYVLIGASEVFMYVGQLEFFNSQAPDGLKSFGSALCMTSISLGNYVSSLLVAIVMKISTRNEGMLGWIPGNLNMGHLDRFYFLLAALTAADLVVYIAMARWYKYVKFQGNNIEEENNDKNPELYV