Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79712.t1 | XP_013444715.1 | 99.5 | 551 | 3 | 0 | 1 | 551 | 1 | 551 | 0.00E+00 | 1092.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79712.t1 | Q9FPW6 | 79.8 | 554 | 102 | 5 | 5 | 551 | 7 | 557 | 3.5e-249 | 862.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79712.t1 | G7ZYQ8 | 99.5 | 551 | 3 | 0 | 1 | 551 | 1 | 551 | 0.0e+00 | 1092.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79712 | MS.gene92133 | PPI |
| MS.gene98180 | MS.gene79712 | PPI |
| MS.gene79712 | MS.gene59617 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79712.t1 | MTR_8g028190 | 99.456 | 551 | 3 | 0 | 1 | 551 | 1 | 551 | 0.0 | 1140 |
| MS.gene79712.t1 | MTR_8g028190 | 98.032 | 559 | 3 | 1 | 1 | 551 | 1 | 559 | 0.0 | 1132 |
| MS.gene79712.t1 | MTR_8g028190 | 92.724 | 591 | 3 | 1 | 1 | 551 | 1 | 591 | 0.0 | 1100 |
| MS.gene79712.t1 | MTR_4g088460 | 52.083 | 192 | 73 | 4 | 78 | 269 | 10 | 182 | 1.22e-46 | 167 |
| MS.gene79712.t1 | MTR_4g088460 | 55.469 | 128 | 31 | 1 | 399 | 526 | 203 | 304 | 1.16e-38 | 145 |
| MS.gene79712.t1 | MTR_7g116800 | 52.632 | 76 | 31 | 2 | 22 | 96 | 12 | 83 | 1.16e-15 | 73.9 |
| MS.gene79712.t1 | MTR_7g116810 | 55.556 | 63 | 27 | 1 | 22 | 83 | 105 | 167 | 2.89e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79712.t1 | AT3G61600 | 79.783 | 554 | 102 | 5 | 5 | 551 | 7 | 557 | 0.0 | 902 |
| MS.gene79712.t1 | AT3G61600 | 79.783 | 554 | 102 | 5 | 5 | 551 | 7 | 557 | 0.0 | 902 |
| MS.gene79712.t1 | AT2G46260 | 79.099 | 555 | 104 | 6 | 5 | 551 | 6 | 556 | 0.0 | 890 |
| MS.gene79712.t1 | AT4G01160 | 58.769 | 536 | 199 | 9 | 24 | 550 | 4 | 526 | 0.0 | 591 |
| MS.gene79712.t1 | AT4G01160 | 58.505 | 535 | 180 | 8 | 24 | 550 | 4 | 504 | 0.0 | 590 |
Find 149 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTGTCTTTACTTCATTAA+TGG | 0.228738 | 8.4:+67769725 | MS.gene79712:CDS |
| TTGCTCGAGCCGTCGTTTCT+TGG | 0.232570 | 8.4:+67769307 | MS.gene79712:CDS |
| CCAGCAGTGTGTAGTATATT+TGG | 0.271055 | 8.4:+67769382 | MS.gene79712:CDS |
| CAAAGTTCTTTCCATTGCTT+TGG | 0.271545 | 8.4:+67769518 | MS.gene79712:CDS |
| ATGATAGTAATTTCTCTGAT+AGG | 0.288454 | 8.4:+67766559 | MS.gene79712:CDS |
| TAAGACAGCACCTGGTTTGC+TGG | 0.309622 | 8.4:+67768362 | MS.gene79712:CDS |
| TGAAGCAACTTCAAATTTAT+CGG | 0.325451 | 8.4:-67768400 | None:intergenic |
| GATTCCATGGACTTCGTTCA+TGG | 0.328777 | 8.4:+67769697 | MS.gene79712:CDS |
| TCTAGCTCCGACGCCGATTT+CGG | 0.333073 | 8.4:+67766525 | MS.gene79712:CDS |
| CATGTATATGACCAGGTTCC+AGG | 0.344944 | 8.4:+67768959 | MS.gene79712:intron |
| TAAAAGCCCGTTCTTCTATA+AGG | 0.350419 | 8.4:+67768031 | MS.gene79712:CDS |
| CCGGCCAGACGGGAACAAAT+TGG | 0.356600 | 8.4:-67769426 | None:intergenic |
| TTAAGACCTTCTTAAGCTTT+CGG | 0.371733 | 8.4:-67769175 | None:intergenic |
| CCATTCAAAATCTGCTCATC+TGG | 0.375584 | 8.4:-67767344 | None:intergenic |
| TTGTACCTCTATTGCTGATT+GGG | 0.388063 | 8.4:+67766638 | MS.gene79712:CDS |
| TGCTTTGCCGCATCAGTTAG+TGG | 0.388482 | 8.4:-67768531 | None:intergenic |
| GCTGCCATCTAGTGTCTTAA+TGG | 0.391173 | 8.4:+67768494 | MS.gene79712:CDS |
| GTCTGGCCGGGTTTATTCTC+AGG | 0.392633 | 8.4:+67769439 | MS.gene79712:CDS |
| AAAGTTCTTTCCATTGCTTT+GGG | 0.394503 | 8.4:+67769519 | MS.gene79712:CDS |
| CCAATTTGTTCCCGTCTGGC+CGG | 0.395141 | 8.4:+67769426 | MS.gene79712:CDS |
| CAATTTGTTCCCGTCTGGCC+GGG | 0.395259 | 8.4:+67769427 | MS.gene79712:CDS |
| AGCTTTCGGCAGGTCATATG+AGG | 0.407830 | 8.4:-67769161 | None:intergenic |
| ATTGTACCTCTATTGCTGAT+TGG | 0.409104 | 8.4:+67766637 | MS.gene79712:CDS |
| TGTTCCAATTTGTTCCCGTC+TGG | 0.416143 | 8.4:+67769422 | MS.gene79712:CDS |
| GAATCAGGTTGAGGATCAAC+TGG | 0.418846 | 8.4:-67766609 | None:intergenic |
| TATCTTCCAGATTGCCGTAC+TGG | 0.419089 | 8.4:-67769094 | None:intergenic |
| TTATTCTCAGGCATTTCACT+TGG | 0.423250 | 8.4:+67769451 | MS.gene79712:CDS |
| TCAGATTCCATCACCGTAAC+CGG | 0.431515 | 8.4:-67766486 | None:intergenic |
| ATGGTTGAAGAATCCCCTTC+TGG | 0.431713 | 8.4:+67767428 | MS.gene79712:CDS |
| ACCCTCAGAATTAATGCTTC+TGG | 0.431935 | 8.4:+67768185 | MS.gene79712:CDS |
| CACTGTGGACTATGAATTTG+CGG | 0.433172 | 8.4:+67769580 | MS.gene79712:CDS |
| AGGTAAAGCAATGCAGATTC+AGG | 0.434966 | 8.4:-67768468 | None:intergenic |
| CGATCTGTTTGATCCGGTTA+CGG | 0.437284 | 8.4:+67766473 | MS.gene79712:CDS |
| ACATATCAGTTCTCCGATCT+TGG | 0.439435 | 8.4:+67768004 | MS.gene79712:CDS |
| TGAATCTGCATTGCTTTACC+TGG | 0.451325 | 8.4:+67768470 | MS.gene79712:CDS |
| TGATAGTAATTTCTCTGATA+GGG | 0.451951 | 8.4:+67766560 | MS.gene79712:CDS |
| GAATTCCGATCTGTTTGATC+CGG | 0.452265 | 8.4:+67766467 | MS.gene79712:CDS |
| TTCGAATGGGATGAGGGAAT+CGG | 0.454577 | 8.4:+67768148 | MS.gene79712:CDS |
| GCTCTACCTTATAGAAGAAC+GGG | 0.455173 | 8.4:-67768037 | None:intergenic |
| TCAAATTCAACCACCTTGAC+AGG | 0.458404 | 8.4:-67769350 | None:intergenic |
| AGTACGGCAATCTGGAAGAT+AGG | 0.459958 | 8.4:+67769096 | MS.gene79712:CDS |
| ATGGACTTCGTTCATGGCTG+AGG | 0.461086 | 8.4:+67769703 | MS.gene79712:CDS |
| GTTTGATCCGGTTACGGTGA+TGG | 0.462190 | 8.4:+67766479 | MS.gene79712:CDS |
| TGATGGTGAGCTCGGCCCTT+AGG | 0.463714 | 8.4:-67769757 | None:intergenic |
| TTAATGGCGTTCTACACCTA+AGG | 0.467779 | 8.4:+67769741 | MS.gene79712:CDS |
| TCAGCCATTAAGACACTAGA+TGG | 0.468273 | 8.4:-67768498 | None:intergenic |
| ATTGAAAGCAAATCCGAAAT+CGG | 0.472219 | 8.4:-67766538 | None:intergenic |
| GAAACTTGTTTGCGATTCCA+TGG | 0.474206 | 8.4:+67769684 | MS.gene79712:CDS |
| GAGTAATCCATGCCCAGGTT+GGG | 0.476612 | 8.4:-67767951 | None:intergenic |
| TAGACACCAGTACGGCAATC+TGG | 0.477520 | 8.4:+67769088 | MS.gene79712:CDS |
| GCATTTCACTTGGGTGGACA+AGG | 0.479220 | 8.4:+67769461 | MS.gene79712:CDS |
| TTGTGTGGCTTCTGAAAATC+AGG | 0.481870 | 8.4:+67767388 | MS.gene79712:CDS |
| TATTGCCTCTACTCCGGCTA+GGG | 0.485070 | 8.4:-67769000 | None:intergenic |
| GAGAATAAACCCGGCCAGAC+GGG | 0.491594 | 8.4:-67769436 | None:intergenic |
| TTTATGACTTTGTGCTGAAG+TGG | 0.491647 | 8.4:+67769063 | MS.gene79712:CDS |
| TTGCTGATTGGGCGAGGCAT+CGG | 0.492519 | 8.4:+67766649 | MS.gene79712:CDS |
| TCCACATCGCCAACGGTCAC+TGG | 0.493627 | 8.4:+67769268 | MS.gene79712:CDS |
| TGACAATGATGAACCCAACC+TGG | 0.493819 | 8.4:+67767938 | MS.gene79712:CDS |
| GCTTGGTTATATCCTTGTAT+CGG | 0.494386 | 8.4:-67768566 | None:intergenic |
| ATTGGGCGAGGCATCGGAAG+AGG | 0.494867 | 8.4:+67766655 | MS.gene79712:CDS |
| TACAGAAGAAGCTGCTCTCA+TGG | 0.502881 | 8.4:+67768302 | MS.gene79712:intron |
| TTCATCCAAGCTTGTCCTTG+AGG | 0.503077 | 8.4:+67769223 | MS.gene79712:CDS |
| CAGCATCTTCTGATGCAACC+TGG | 0.506247 | 8.4:-67769040 | None:intergenic |
| CCTCGCCCAATCAGCAATAG+AGG | 0.508375 | 8.4:-67766643 | None:intergenic |
| TAGAGCCTCAAGGACAAGCT+TGG | 0.509349 | 8.4:-67769228 | None:intergenic |
| GAAGATATCAAGAAAGAAAA+CGG | 0.509506 | 8.4:+67766684 | MS.gene79712:CDS |
| TACGGTGATGGAATCTGAAT+GGG | 0.512220 | 8.4:+67766491 | MS.gene79712:CDS |
| TTGCTAACAAACTCCTCTGT+TGG | 0.513889 | 8.4:-67769614 | None:intergenic |
| AGAGTAATCCATGCCCAGGT+TGG | 0.514979 | 8.4:-67767952 | None:intergenic |
| ATCAAAACATCCAGCAAACC+AGG | 0.518936 | 8.4:-67768372 | None:intergenic |
| GCCACACAATCATCCATGTC+AGG | 0.519496 | 8.4:-67767374 | None:intergenic |
| GACCTTCTTAAGCTTTCGGC+AGG | 0.520979 | 8.4:-67769171 | None:intergenic |
| TTACGGTGATGGAATCTGAA+TGG | 0.521064 | 8.4:+67766490 | MS.gene79712:CDS |
| CTTCAGCTGCCAGTGACCGT+TGG | 0.521484 | 8.4:-67769277 | None:intergenic |
| TACCAGAAGCATTAATTCTG+AGG | 0.521501 | 8.4:-67768187 | None:intergenic |
| GTTATGAACTTGCCCCTAGC+CGG | 0.523090 | 8.4:+67768987 | MS.gene79712:CDS |
| ATTATCTAGTGATGATCTCC+AGG | 0.523124 | 8.4:+67769022 | MS.gene79712:CDS |
| TTCACAGGTGGCAAGGCTGT+TGG | 0.524034 | 8.4:+67769656 | MS.gene79712:CDS |
| TATGACCAGGTTCCAGGATG+AGG | 0.526199 | 8.4:+67768965 | MS.gene79712:intron |
| CCTCTATTGCTGATTGGGCG+AGG | 0.527454 | 8.4:+67766643 | MS.gene79712:CDS |
| GAAGATAGGCGAGAAGTCCT+AGG | 0.528020 | 8.4:+67769110 | MS.gene79712:CDS |
| AGATCGGAGAACTGATATGT+AGG | 0.529172 | 8.4:-67768001 | None:intergenic |
| TGCTCTACCTTATAGAAGAA+CGG | 0.531664 | 8.4:-67768038 | None:intergenic |
| AGACACTAGATGGCAGCTCC+AGG | 0.539810 | 8.4:-67768488 | None:intergenic |
| ATCGTGCAAGCCGCGAGCCT+AGG | 0.541327 | 8.4:-67769127 | None:intergenic |
| TCTCAGGCATTTCACTTGGG+TGG | 0.543562 | 8.4:+67769455 | MS.gene79712:CDS |
| ATATTGCCTCTACTCCGGCT+AGG | 0.544346 | 8.4:-67769001 | None:intergenic |
| TGATGAACCCAACCTGGGCA+TGG | 0.549556 | 8.4:+67767944 | MS.gene79712:CDS |
| TATTCTCAGGCATTTCACTT+GGG | 0.551671 | 8.4:+67769452 | MS.gene79712:CDS |
| GTATCTTGCTAGCCGATACA+AGG | 0.552442 | 8.4:+67768554 | MS.gene79712:CDS |
| ACCAGAAGCATTAATTCTGA+GGG | 0.556125 | 8.4:-67768186 | None:intergenic |
| TTATGACTTTGTGCTGAAGT+GGG | 0.557998 | 8.4:+67769064 | MS.gene79712:CDS |
| TTGAGCATTAAGACAGCACC+TGG | 0.559659 | 8.4:+67768354 | MS.gene79712:CDS |
| ATCATGTTCAAAGTCACTAC+AGG | 0.559974 | 8.4:-67769198 | None:intergenic |
| AAACGACGGCTCGAGCAAGC+AGG | 0.559982 | 8.4:-67769302 | None:intergenic |
| AAAGGCAATTACACATTCAC+AGG | 0.562583 | 8.4:+67769641 | MS.gene79712:CDS |
| GGAGGAAGAAGTTGTTGCAA+TGG | 0.563065 | 8.4:+67767409 | MS.gene79712:CDS |
| GCAAGTTCATAACCTCATCC+TGG | 0.563800 | 8.4:-67768977 | None:intergenic |
| GATCGGAGAACTGATATGTA+GGG | 0.564273 | 8.4:-67768000 | None:intergenic |
| CACAATCATCCATGTCAGGT+TGG | 0.565888 | 8.4:-67767370 | None:intergenic |
| AGATAATATTGCCTCTACTC+CGG | 0.566343 | 8.4:-67769006 | None:intergenic |
| CGAGCCGTCGTTTCTTGGAG+AGG | 0.567112 | 8.4:+67769312 | MS.gene79712:CDS |
| TATACTACACACTGCTGGCG+TGG | 0.568228 | 8.4:-67769377 | None:intergenic |
| GAATGGGAACCAACCTGACA+TGG | 0.568779 | 8.4:+67767361 | MS.gene79712:CDS |
| TCAGCCATGAACGAAGTCCA+TGG | 0.573234 | 8.4:-67769701 | None:intergenic |
| AGTATATTTGGATCTAAAGC+GGG | 0.573614 | 8.4:+67769394 | MS.gene79712:CDS |
| GAGCCGTCGTTTCTTGGAGA+GGG | 0.580650 | 8.4:+67769313 | MS.gene79712:CDS |
| CATGCATGAGATATTGTAGT+CGG | 0.582698 | 8.4:+67768421 | MS.gene79712:CDS |
| CATTTCACTTGGGTGGACAA+GGG | 0.583090 | 8.4:+67769462 | MS.gene79712:CDS |
| CTTGCCCCTAGCCGGAGTAG+AGG | 0.585158 | 8.4:+67768995 | MS.gene79712:CDS |
| GTTCAGAGTAATCCATGCCC+AGG | 0.587746 | 8.4:-67767956 | None:intergenic |
| CCAAATATACTACACACTGC+TGG | 0.588348 | 8.4:-67769382 | None:intergenic |
| GGCAGGTCATATGAGGGAAG+CGG | 0.590638 | 8.4:-67769154 | None:intergenic |
| TCTGTCAGCACATTGTAACA+TGG | 0.590755 | 8.4:+67769490 | MS.gene79712:CDS |
| ATGGAATCTGAATGGGCTCA+CGG | 0.594315 | 8.4:+67766498 | MS.gene79712:CDS |
| TTACACATTCACAGGTGGCA+AGG | 0.596424 | 8.4:+67769649 | MS.gene79712:CDS |
| GCCAGTGACCGTTGGCGATG+TGG | 0.596471 | 8.4:-67769269 | None:intergenic |
| GACCTGCCGAAAGCTTAAGA+AGG | 0.596935 | 8.4:+67769169 | MS.gene79712:CDS |
| TGAGAATAAACCCGGCCAGA+CGG | 0.599156 | 8.4:-67769437 | None:intergenic |
| TCACTGTCTGATGGTGAGCT+CGG | 0.599457 | 8.4:-67769765 | None:intergenic |
| AATTAAGATAATACCAGAAG+GGG | 0.600741 | 8.4:-67767441 | None:intergenic |
| AGCAAATCCGAAATCGGCGT+CGG | 0.603564 | 8.4:-67766532 | None:intergenic |
| GACAATGATGAACCCAACCT+GGG | 0.609287 | 8.4:+67767939 | MS.gene79712:CDS |
| CAATTAAGATAATACCAGAA+GGG | 0.610310 | 8.4:-67767442 | None:intergenic |
| GAAATGCCTGAGAATAAACC+CGG | 0.615264 | 8.4:-67769445 | None:intergenic |
| GCATGTGTGTCACTGTCTGA+TGG | 0.616189 | 8.4:-67769774 | None:intergenic |
| TAATGGCGTTCTACACCTAA+GGG | 0.616553 | 8.4:+67769742 | MS.gene79712:CDS |
| TAGTATATTTGGATCTAAAG+CGG | 0.623586 | 8.4:+67769393 | MS.gene79712:CDS |
| ATACAAATATCGTCCTGTCA+AGG | 0.628696 | 8.4:+67769337 | MS.gene79712:CDS |
| AGGTTGAGGATCAACTGGAT+CGG | 0.629008 | 8.4:-67766604 | None:intergenic |
| ACCTGACATGGATGATTGTG+TGG | 0.633757 | 8.4:+67767373 | MS.gene79712:CDS |
| ATTGCCTCTACTCCGGCTAG+GGG | 0.635190 | 8.4:-67768999 | None:intergenic |
| CAGAGGTTCCACATCGCCAA+CGG | 0.635240 | 8.4:+67769261 | MS.gene79712:CDS |
| GGCAATTACACATTCACAGG+TGG | 0.644944 | 8.4:+67769644 | MS.gene79712:CDS |
| GCTTTCGGCAGGTCATATGA+GGG | 0.650096 | 8.4:-67769160 | None:intergenic |
| GGCAAGGTCAAGACCAACAG+AGG | 0.655375 | 8.4:+67769601 | MS.gene79712:CDS |
| CAAATATCGTCCTGTCAAGG+TGG | 0.658225 | 8.4:+67769340 | MS.gene79712:CDS |
| GAGTTTGTTAGCAAATACAA+AGG | 0.660955 | 8.4:+67769623 | MS.gene79712:CDS |
| TGGACTATGAATTTGCGGCA+AGG | 0.662962 | 8.4:+67769585 | MS.gene79712:CDS |
| ATATTTGGATCTAAAGCGGG+AGG | 0.670761 | 8.4:+67769397 | MS.gene79712:CDS |
| AAATGTTAACATAGGTGATG+AGG | 0.675883 | 8.4:+67767908 | MS.gene79712:intron |
| AAGTGGGCTAGACACCAGTA+CGG | 0.677973 | 8.4:+67769080 | MS.gene79712:CDS |
| GGCGAGAAGTCCTAGGCTCG+CGG | 0.680972 | 8.4:+67769117 | MS.gene79712:CDS |
| CGTAACCGGATCAAACAGAT+CGG | 0.681842 | 8.4:-67766472 | None:intergenic |
| ATGCCCTCTCCAAGAAACGA+CGG | 0.688090 | 8.4:-67769316 | None:intergenic |
| TGTGGCTTCTGAAAATCAGG+AGG | 0.690006 | 8.4:+67767391 | MS.gene79712:CDS |
| AGTTCAACCACTAACTGATG+CGG | 0.693530 | 8.4:+67768524 | MS.gene79712:CDS |
| GGGATCAGTGAGCTTCACTG+TGG | 0.699432 | 8.4:+67769565 | MS.gene79712:CDS |
| GAATCTGAATGGGCTCACGG+TGG | 0.756336 | 8.4:+67766501 | MS.gene79712:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTTTATTTATTTATTG+TGG | + | chr8.4:67766862-67766881 | MS.gene79712:intron | 10.0% |
| !! | ATTGTTTATTTATTTATTGT+GGG | + | chr8.4:67766863-67766882 | MS.gene79712:intron | 10.0% |
| !!! | AAAATTGATTTTTTTAATGA+TGG | + | chr8.4:67766779-67766798 | MS.gene79712:intron | 10.0% |
| !!! | AAATTGATTTTTTTAATGAT+GGG | + | chr8.4:67766780-67766799 | MS.gene79712:intron | 10.0% |
| !! | AAAACATTTATTAAATTGGA+CGG | + | chr8.4:67768719-67768738 | MS.gene79712:intron | 15.0% |
| !!! | AAAATTGAAATTTTTGTTGA+TGG | + | chr8.4:67766819-67766838 | MS.gene79712:intron | 15.0% |
| !!! | AAATTGAAATTTTTGTTGAT+GGG | + | chr8.4:67766820-67766839 | MS.gene79712:intron | 15.0% |
| !!! | AATAATTGGATTTTTTGTTA+TGG | + | chr8.4:67766738-67766757 | MS.gene79712:intron | 15.0% |
| !!! | ATAATTGGATTTTTTGTTAT+GGG | + | chr8.4:67766739-67766758 | MS.gene79712:intron | 15.0% |
| !!! | TTTCATTTTTGTTGAATAAT+TGG | + | chr8.4:67766724-67766743 | MS.gene79712:intron | 15.0% |
| !! | AAACATTTATTAAATTGGAC+GGG | + | chr8.4:67768720-67768739 | MS.gene79712:intron | 20.0% |
| !! | ACCAAATGTAAATATAAATC+TGG | + | chr8.4:67767090-67767109 | MS.gene79712:intron | 20.0% |
| !! | ACTATCAATATATGAAATGA+GGG | + | chr8.4:67767659-67767678 | MS.gene79712:intron | 20.0% |
| !! | CAAATGTAAATATAAATCTG+GGG | + | chr8.4:67767092-67767111 | MS.gene79712:intron | 20.0% |
| !! | CCAAATGTAAATATAAATCT+GGG | + | chr8.4:67767091-67767110 | MS.gene79712:intron | 20.0% |
| !! | GTGCAAAACATTTATTAAAT+TGG | + | chr8.4:67768715-67768734 | MS.gene79712:intron | 20.0% |
| !! | TAATTATGGGTTTATTTGTT+AGG | + | chr8.4:67766919-67766938 | MS.gene79712:intron | 20.0% |
| !! | TATTTGAAGAAAAAATTGGT+TGG | + | chr8.4:67767022-67767041 | MS.gene79712:intron | 20.0% |
| !! | TCACTATTTGAAGAAAAAAT+TGG | + | chr8.4:67767018-67767037 | MS.gene79712:intron | 20.0% |
| !! | TTTATTTATTTATTGTGGGT+TGG | + | chr8.4:67766867-67766886 | MS.gene79712:intron | 20.0% |
| !!! | AATTATGGGTTTATTTGTTA+GGG | + | chr8.4:67766920-67766939 | MS.gene79712:intron | 20.0% |
| !!! | GATTTTGAAAATGTTAACAT+AGG | + | chr8.4:67767900-67767919 | MS.gene79712:intron | 20.0% |
| !!! | TTAGATTTGTAGATGTTTTT+AGG | + | chr8.4:67766984-67767003 | MS.gene79712:intron | 20.0% |
| ! | AAAAAAAACAAACACTTGCT+TGG | - | chr8.4:67768586-67768605 | None:intergenic | 25.0% |
| ! | AAATGGAAGATACAAACAAA+GGG | - | chr8.4:67767554-67767573 | None:intergenic | 25.0% |
| ! | AATTAAGATAATACCAGAAG+GGG | - | chr8.4:67767444-67767463 | None:intergenic | 25.0% |
| ! | AATTTGAAAGTGATTGTTAC+TGG | + | chr8.4:67767154-67767173 | MS.gene79712:intron | 25.0% |
| ! | ATGATAGTAATTTCTCTGAT+AGG | + | chr8.4:67766559-67766578 | MS.gene79712:CDS | 25.0% |
| ! | ATGGAAAGTTAGAATCAATA+AGG | - | chr8.4:67768850-67768869 | None:intergenic | 25.0% |
| ! | ATTTGAAAGTGATTGTTACT+GGG | + | chr8.4:67767155-67767174 | MS.gene79712:intron | 25.0% |
| ! | CAATTAAGATAATACCAGAA+GGG | - | chr8.4:67767445-67767464 | None:intergenic | 25.0% |
| ! | CACTATCAATATATGAAATG+AGG | + | chr8.4:67767658-67767677 | MS.gene79712:intron | 25.0% |
| ! | CATGAAATATATAAACAACG+GGG | - | chr8.4:67767530-67767549 | None:intergenic | 25.0% |
| ! | CCCAGATTTATATTTACATT+TGG | - | chr8.4:67767094-67767113 | None:intergenic | 25.0% |
| ! | GAAGATATCAAGAAAGAAAA+CGG | + | chr8.4:67766684-67766703 | MS.gene79712:CDS | 25.0% |
| ! | GATTGTCTTTACTTCATTAA+TGG | + | chr8.4:67769725-67769744 | MS.gene79712:CDS | 25.0% |
| ! | GCATGAAATATATAAACAAC+GGG | - | chr8.4:67767531-67767550 | None:intergenic | 25.0% |
| ! | GGCATGAAATATATAAACAA+CGG | - | chr8.4:67767532-67767551 | None:intergenic | 25.0% |
| ! | TACTTGAGTTATTACTTGTT+AGG | + | chr8.4:67767470-67767489 | MS.gene79712:intron | 25.0% |
| ! | TAGTATATTTGGATCTAAAG+CGG | + | chr8.4:67769393-67769412 | MS.gene79712:CDS | 25.0% |
| ! | TCAGTGATGAAAATGAAATT+AGG | + | chr8.4:67766955-67766974 | MS.gene79712:intron | 25.0% |
| ! | TGAAGCAACTTCAAATTTAT+CGG | - | chr8.4:67768403-67768422 | None:intergenic | 25.0% |
| ! | TGAGGGTAAATTAAATGATA+AGG | - | chr8.4:67768245-67768264 | None:intergenic | 25.0% |
| ! | TGATAGTAATTTCTCTGATA+GGG | + | chr8.4:67766560-67766579 | MS.gene79712:CDS | 25.0% |
| ! | TGATGAAAATGAAATTAGGT+TGG | + | chr8.4:67766959-67766978 | MS.gene79712:intron | 25.0% |
| !! | AAAACGGTATTTTTCTATCT+AGG | + | chr8.4:67766700-67766719 | MS.gene79712:intron | 25.0% |
| !! | AATGAGGGTATAATTTACTA+AGG | + | chr8.4:67767674-67767693 | MS.gene79712:intron | 25.0% |
| !! | CTGCTAAGAAAACATATTTT+TGG | - | chr8.4:67768103-67768122 | None:intergenic | 25.0% |
| !! | TGTGTATGTTTTCTGTTAAT+GGG | + | chr8.4:67767062-67767081 | MS.gene79712:intron | 25.0% |
| !! | TTGTGTATGTTTTCTGTTAA+TGG | + | chr8.4:67767061-67767080 | MS.gene79712:intron | 25.0% |
| !!! | AAAAAGCTTGGTTCTTTTAA+TGG | + | chr8.4:67767192-67767211 | MS.gene79712:intron | 25.0% |
| !!! | AGTAAGTTCTTGTTTTATAG+TGG | + | chr8.4:67767585-67767604 | MS.gene79712:intron | 25.0% |
| !!! | ATTTTAGAGAACTCTATTGT+TGG | + | chr8.4:67768779-67768798 | MS.gene79712:intron | 25.0% |
| !!! | CATGTGTTTTTTCTAAAGAA+TGG | - | chr8.4:67768869-67768888 | None:intergenic | 25.0% |
| !!! | GATTTTGAAAATGTTAACCT+AGG | + | chr8.4:67767804-67767823 | MS.gene79712:intron | 25.0% |
| !!! | GTAAGTTCTTGTTTTATAGT+GGG | + | chr8.4:67767586-67767605 | MS.gene79712:intron | 25.0% |
| !!! | TAAGTTCTTGTTTTATAGTG+GGG | + | chr8.4:67767587-67767606 | MS.gene79712:intron | 25.0% |
| !!! | TGATTTTTTTAATGATGGGT+TGG | + | chr8.4:67766784-67766803 | MS.gene79712:intron | 25.0% |
| !!! | TGTGATATTTTTGTGTATGT+TGG | + | chr8.4:67767233-67767252 | MS.gene79712:intron | 25.0% |
| !!! | TTTTTTCTCTTCTAGCAATT+CGG | + | chr8.4:67768656-67768675 | MS.gene79712:intron | 25.0% |
| AAAGTTCTTTCCATTGCTTT+GGG | + | chr8.4:67769519-67769538 | MS.gene79712:CDS | 30.0% | |
| AAATGTTAACATAGGTGATG+AGG | + | chr8.4:67767908-67767927 | MS.gene79712:intron | 30.0% | |
| AATGGAAGATACAAACAAAG+GGG | - | chr8.4:67767553-67767572 | None:intergenic | 30.0% | |
| ACAGAAGACCATATAATATC+AGG | - | chr8.4:67767307-67767326 | None:intergenic | 30.0% | |
| AGTGATGATCTTCAAAATCA+TGG | - | chr8.4:67767642-67767661 | None:intergenic | 30.0% | |
| ATGTTGGATAATGTTTGTGT+TGG | + | chr8.4:67767249-67767268 | MS.gene79712:intron | 30.0% | |
| ATTGAAAGCAAATCCGAAAT+CGG | - | chr8.4:67766541-67766560 | None:intergenic | 30.0% | |
| CAAAGTTACAGAAAAAAGCT+TGG | + | chr8.4:67767180-67767199 | MS.gene79712:intron | 30.0% | |
| CGTTGTAACCTGATATTATA+TGG | + | chr8.4:67767296-67767315 | MS.gene79712:intron | 30.0% | |
| GAAATGGAAGATACAAACAA+AGG | - | chr8.4:67767555-67767574 | None:intergenic | 30.0% | |
| GAAGAAAAAATTGGTTGGAA+GGG | + | chr8.4:67767027-67767046 | MS.gene79712:intron | 30.0% | |
| GCAATTAAGATAATACCAGA+AGG | - | chr8.4:67767446-67767465 | None:intergenic | 30.0% | |
| TATACATCATGTATATGACC+AGG | + | chr8.4:67768952-67768971 | MS.gene79712:intron | 30.0% | |
| TGAAGAAAAAATTGGTTGGA+AGG | + | chr8.4:67767026-67767045 | MS.gene79712:intron | 30.0% | |
| TTAAGACCTTCTTAAGCTTT+CGG | - | chr8.4:67769178-67769197 | None:intergenic | 30.0% | |
| ! | AAAAGAAGTATACCACGTTT+AGG | - | chr8.4:67768276-67768295 | None:intergenic | 30.0% |
| ! | AGTATATTTGGATCTAAAGC+GGG | + | chr8.4:67769394-67769413 | MS.gene79712:CDS | 30.0% |
| ! | GTTTATTTGTTAGGGTTTCT+AGG | + | chr8.4:67766928-67766947 | MS.gene79712:intron | 30.0% |
| ! | TCTTGAAAGACTTTTTGTCA+TGG | - | chr8.4:67768808-67768827 | None:intergenic | 30.0% |
| ! | TTTTTCTCTTCTAGCAATTC+GGG | + | chr8.4:67768657-67768676 | MS.gene79712:intron | 30.0% |
| !! | GAGTTTGTTAGCAAATACAA+AGG | + | chr8.4:67769623-67769642 | MS.gene79712:CDS | 30.0% |
| !! | GATGGGTTTGTTTAATTTGA+TGG | + | chr8.4:67766837-67766856 | MS.gene79712:intron | 30.0% |
| !!! | CAAGCTTTTTTCTGTAACTT+TGG | - | chr8.4:67767182-67767201 | None:intergenic | 30.0% |
| !!! | TTTTGCAGCTTTTTTCGAAT+GGG | + | chr8.4:67768135-67768154 | MS.gene79712:intron | 30.0% |
| AAAGGCAATTACACATTCAC+AGG | + | chr8.4:67769641-67769660 | MS.gene79712:CDS | 35.0% | |
| AAATGTTAACCTAGGTGATG+AGG | + | chr8.4:67767812-67767831 | MS.gene79712:intron | 35.0% | |
| ACGTTTAGGTGACTATTTGA+GGG | - | chr8.4:67768262-67768281 | None:intergenic | 35.0% | |
| AGATAATATTGCCTCTACTC+CGG | - | chr8.4:67769009-67769028 | None:intergenic | 35.0% | |
| ATACAAATATCGTCCTGTCA+AGG | + | chr8.4:67769337-67769356 | MS.gene79712:CDS | 35.0% | |
| ATATAAACAACGGGGCAATA+GGG | - | chr8.4:67767522-67767541 | None:intergenic | 35.0% | |
| ATCATGTTCAAAGTCACTAC+AGG | - | chr8.4:67769201-67769220 | None:intergenic | 35.0% | |
| ATTATCTAGTGATGATCTCC+AGG | + | chr8.4:67769022-67769041 | MS.gene79712:CDS | 35.0% | |
| ATTGTACCTCTATTGCTGAT+TGG | + | chr8.4:67766637-67766656 | MS.gene79712:CDS | 35.0% | |
| CAAAGTTCTTTCCATTGCTT+TGG | + | chr8.4:67769518-67769537 | MS.gene79712:CDS | 35.0% | |
| CATGCATGAGATATTGTAGT+CGG | + | chr8.4:67768421-67768440 | MS.gene79712:CDS | 35.0% | |
| CATTCGAAAAAAGCTGCAAA+AGG | - | chr8.4:67768136-67768155 | None:intergenic | 35.0% | |
| CTTACTATGCAGCAATGAAA+TGG | - | chr8.4:67767571-67767590 | None:intergenic | 35.0% | |
| GCTTGGTTATATCCTTGTAT+CGG | - | chr8.4:67768569-67768588 | None:intergenic | 35.0% | |
| GTAAATATAAATCTGGGGAG+TGG | + | chr8.4:67767097-67767116 | MS.gene79712:intron | 35.0% | |
| TAAAAGCCCGTTCTTCTATA+AGG | + | chr8.4:67768031-67768050 | MS.gene79712:CDS | 35.0% | |
| TATATAAACAACGGGGCAAT+AGG | - | chr8.4:67767523-67767542 | None:intergenic | 35.0% | |
| TATTCTCAGGCATTTCACTT+GGG | + | chr8.4:67769452-67769471 | MS.gene79712:CDS | 35.0% | |
| TGCTCTACCTTATAGAAGAA+CGG | - | chr8.4:67768041-67768060 | None:intergenic | 35.0% | |
| TGTAAATGACTTAGGTGATG+AGG | + | chr8.4:67767836-67767855 | MS.gene79712:intron | 35.0% | |
| TTATGACTTTGTGCTGAAGT+GGG | + | chr8.4:67769064-67769083 | MS.gene79712:CDS | 35.0% | |
| TTATTCTCAGGCATTTCACT+TGG | + | chr8.4:67769451-67769470 | MS.gene79712:CDS | 35.0% | |
| TTTATGACTTTGTGCTGAAG+TGG | + | chr8.4:67769063-67769082 | MS.gene79712:CDS | 35.0% | |
| ! | ATTTCTCTGATAGGGTTTTG+AGG | + | chr8.4:67766568-67766587 | MS.gene79712:CDS | 35.0% |
| ! | CAGATGAGCAGATTTTGAAT+GGG | + | chr8.4:67767345-67767364 | MS.gene79712:CDS | 35.0% |
| ! | GAGGTACAATTTTCAGAATC+AGG | - | chr8.4:67766627-67766646 | None:intergenic | 35.0% |
| ! | TTGTACCTCTATTGCTGATT+GGG | + | chr8.4:67766638-67766657 | MS.gene79712:CDS | 35.0% |
| ! | TTTTCTCTTCTAGCAATTCG+GGG | + | chr8.4:67768658-67768677 | MS.gene79712:intron | 35.0% |
| !! | ACCAGAAGCATTAATTCTGA+GGG | - | chr8.4:67768189-67768208 | None:intergenic | 35.0% |
| !! | AGCTTGGTTCTTTTAATGGA+TGG | + | chr8.4:67767196-67767215 | MS.gene79712:intron | 35.0% |
| !! | CAATTTTCAGAATCAGGTTG+AGG | - | chr8.4:67766621-67766640 | None:intergenic | 35.0% |
| !! | CTTTTAATGGATGGATGCTT+GGG | + | chr8.4:67767205-67767224 | MS.gene79712:intron | 35.0% |
| !! | TACCAGAAGCATTAATTCTG+AGG | - | chr8.4:67768190-67768209 | None:intergenic | 35.0% |
| !! | TCTTTTAATGGATGGATGCT+TGG | + | chr8.4:67767204-67767223 | MS.gene79712:intron | 35.0% |
| !! | TTTTTGGGAATGCAGGAAAA+GGG | + | chr8.4:67769545-67769564 | MS.gene79712:CDS | 35.0% |
| !!! | CTTTTGCAGCTTTTTTCGAA+TGG | + | chr8.4:67768134-67768153 | MS.gene79712:intron | 35.0% |
| !!! | GGTTTTGAGGATTGAAATCA+TGG | + | chr8.4:67766581-67766600 | MS.gene79712:CDS | 35.0% |
| !!! | GTTTTAACTCTAACAACTGC+AGG | - | chr8.4:67767981-67768000 | None:intergenic | 35.0% |
| AATAGGGGAGAGAACAAGTA+AGG | - | chr8.4:67767506-67767525 | None:intergenic | 40.0% | |
| ACATATCAGTTCTCCGATCT+TGG | + | chr8.4:67768004-67768023 | MS.gene79712:CDS | 40.0% | |
| ACCCTCAGAATTAATGCTTC+TGG | + | chr8.4:67768185-67768204 | MS.gene79712:CDS | 40.0% | |
| AGATCGGAGAACTGATATGT+AGG | - | chr8.4:67768004-67768023 | None:intergenic | 40.0% | |
| AGGTAAAGCAATGCAGATTC+AGG | - | chr8.4:67768471-67768490 | None:intergenic | 40.0% | |
| AGTTCAACCACTAACTGATG+CGG | + | chr8.4:67768524-67768543 | MS.gene79712:CDS | 40.0% | |
| ATCAAAACATCCAGCAAACC+AGG | - | chr8.4:67768375-67768394 | None:intergenic | 40.0% | |
| ATGGTCTTCTGTTTGCAGTT+GGG | + | chr8.4:67767315-67767334 | MS.gene79712:intron | 40.0% | |
| ATTGTCCTTTGCTTGTGAGT+GGG | + | chr8.4:67767724-67767743 | MS.gene79712:intron | 40.0% | |
| CACGTTTAGGTGACTATTTG+AGG | - | chr8.4:67768263-67768282 | None:intergenic | 40.0% | |
| CCAAATATACTACACACTGC+TGG | - | chr8.4:67769385-67769404 | None:intergenic | 40.0% | |
| CCAGCAGTGTGTAGTATATT+TGG | + | chr8.4:67769382-67769401 | MS.gene79712:CDS | 40.0% | |
| CCATTCAAAATCTGCTCATC+TGG | - | chr8.4:67767347-67767366 | None:intergenic | 40.0% | |
| CCTTGAAAAATAGAGCCTCA+AGG | - | chr8.4:67769241-67769260 | None:intergenic | 40.0% | |
| CTCAAATAGTCACCTAAACG+TGG | + | chr8.4:67768261-67768280 | MS.gene79712:intron | 40.0% | |
| GAAATGCCTGAGAATAAACC+CGG | - | chr8.4:67769448-67769467 | None:intergenic | 40.0% | |
| GAATTCCGATCTGTTTGATC+CGG | + | chr8.4:67766467-67766486 | MS.gene79712:CDS | 40.0% | |
| GATCGGAGAACTGATATGTA+GGG | - | chr8.4:67768003-67768022 | None:intergenic | 40.0% | |
| GATGAGGCTGTAAATGACTT+AGG | + | chr8.4:67767828-67767847 | MS.gene79712:intron | 40.0% | |
| GCTCTACCTTATAGAAGAAC+GGG | - | chr8.4:67768040-67768059 | None:intergenic | 40.0% | |
| TAATGGCGTTCTACACCTAA+GGG | + | chr8.4:67769742-67769761 | MS.gene79712:CDS | 40.0% | |
| TATAAACAACGGGGCAATAG+GGG | - | chr8.4:67767521-67767540 | None:intergenic | 40.0% | |
| TATGGTCTTCTGTTTGCAGT+TGG | + | chr8.4:67767314-67767333 | MS.gene79712:intron | 40.0% | |
| TATTGTCCTTTGCTTGTGAG+TGG | + | chr8.4:67767723-67767742 | MS.gene79712:intron | 40.0% | |
| TCAAATTCAACCACCTTGAC+AGG | - | chr8.4:67769353-67769372 | None:intergenic | 40.0% | |
| TCAGCCATTAAGACACTAGA+TGG | - | chr8.4:67768501-67768520 | None:intergenic | 40.0% | |
| TCTGTCAGCACATTGTAACA+TGG | + | chr8.4:67769490-67769509 | MS.gene79712:CDS | 40.0% | |
| TGAATCTGCATTGCTTTACC+TGG | + | chr8.4:67768470-67768489 | MS.gene79712:CDS | 40.0% | |
| TTAATGGCGTTCTACACCTA+AGG | + | chr8.4:67769741-67769760 | MS.gene79712:CDS | 40.0% | |
| TTGCTAACAAACTCCTCTGT+TGG | - | chr8.4:67769617-67769636 | None:intergenic | 40.0% | |
| ! | ATATTTGGATCTAAAGCGGG+AGG | + | chr8.4:67769397-67769416 | MS.gene79712:CDS | 40.0% |
| ! | CACTGTGGACTATGAATTTG+CGG | + | chr8.4:67769580-67769599 | MS.gene79712:CDS | 40.0% |
| ! | CCAGATGAGCAGATTTTGAA+TGG | + | chr8.4:67767344-67767363 | MS.gene79712:CDS | 40.0% |
| ! | GAAACTTGTTTGCGATTCCA+TGG | + | chr8.4:67769684-67769703 | MS.gene79712:CDS | 40.0% |
| ! | TTGTGTGGCTTCTGAAAATC+AGG | + | chr8.4:67767388-67767407 | MS.gene79712:CDS | 40.0% |
| ! | TTTTTCCCACTCACAAGCAA+AGG | - | chr8.4:67767732-67767751 | None:intergenic | 40.0% |
| !! | CCTTGAGGCTCTATTTTTCA+AGG | + | chr8.4:67769238-67769257 | MS.gene79712:CDS | 40.0% |
| !! | GTTTTTGGGAATGCAGGAAA+AGG | + | chr8.4:67769544-67769563 | MS.gene79712:CDS | 40.0% |
| !! | TACGGTGATGGAATCTGAAT+GGG | + | chr8.4:67766491-67766510 | MS.gene79712:CDS | 40.0% |
| !! | TTACGGTGATGGAATCTGAA+TGG | + | chr8.4:67766490-67766509 | MS.gene79712:CDS | 40.0% |
| !!! | AGCTTTTTTCGAATGGGATG+AGG | + | chr8.4:67768141-67768160 | MS.gene79712:intron | 40.0% |
| !!! | CATTGCTTTGGGCTGTTTTT+GGG | + | chr8.4:67769530-67769549 | MS.gene79712:CDS | 40.0% |
| !!! | GCTTTTTTCGAATGGGATGA+GGG | + | chr8.4:67768142-67768161 | MS.gene79712:intron | 40.0% |
| !!! | TGGTTTGCTGGATGTTTTGA+TGG | + | chr8.4:67768374-67768393 | MS.gene79712:CDS | 40.0% |
| ACCTGACATGGATGATTGTG+TGG | + | chr8.4:67767373-67767392 | MS.gene79712:CDS | 45.0% | |
| AGGTTGAGGATCAACTGGAT+CGG | - | chr8.4:67766607-67766626 | None:intergenic | 45.0% | |
| AGTACGGCAATCTGGAAGAT+AGG | + | chr8.4:67769096-67769115 | MS.gene79712:CDS | 45.0% | |
| ATGGTTGAAGAATCCCCTTC+TGG | + | chr8.4:67767428-67767447 | MS.gene79712:CDS | 45.0% | |
| CAAATATCGTCCTGTCAAGG+TGG | + | chr8.4:67769340-67769359 | MS.gene79712:CDS | 45.0% | |
| CACAATCATCCATGTCAGGT+TGG | - | chr8.4:67767373-67767392 | None:intergenic | 45.0% | |
| CATGTATATGACCAGGTTCC+AGG | + | chr8.4:67768959-67768978 | MS.gene79712:intron | 45.0% | |
| CATTTACAGCCTCATCACCT+AGG | - | chr8.4:67767824-67767843 | None:intergenic | 45.0% | |
| CATTTCACTTGGGTGGACAA+GGG | + | chr8.4:67769462-67769481 | MS.gene79712:CDS | 45.0% | |
| CCAAAAACAGCCCAAAGCAA+TGG | - | chr8.4:67769532-67769551 | None:intergenic | 45.0% | |
| CGATCTGTTTGATCCGGTTA+CGG | + | chr8.4:67766473-67766492 | MS.gene79712:CDS | 45.0% | |
| CGTAACCGGATCAAACAGAT+CGG | - | chr8.4:67766475-67766494 | None:intergenic | 45.0% | |
| GACAATGATGAACCCAACCT+GGG | + | chr8.4:67767939-67767958 | MS.gene79712:CDS | 45.0% | |
| GATTCCATGGACTTCGTTCA+TGG | + | chr8.4:67769697-67769716 | MS.gene79712:CDS | 45.0% | |
| GCAAGTTCATAACCTCATCC+TGG | - | chr8.4:67768980-67768999 | None:intergenic | 45.0% | |
| GCTGCCATCTAGTGTCTTAA+TGG | + | chr8.4:67768494-67768513 | MS.gene79712:CDS | 45.0% | |
| GGAGGAAGAAGTTGTTGCAA+TGG | + | chr8.4:67767409-67767428 | MS.gene79712:CDS | 45.0% | |
| GGCAATTACACATTCACAGG+TGG | + | chr8.4:67769644-67769663 | MS.gene79712:CDS | 45.0% | |
| GTATCTTGCTAGCCGATACA+AGG | + | chr8.4:67768554-67768573 | MS.gene79712:CDS | 45.0% | |
| TACAGAAGAAGCTGCTCTCA+TGG | + | chr8.4:67768302-67768321 | MS.gene79712:intron | 45.0% | |
| TATCTTCCAGATTGCCGTAC+TGG | - | chr8.4:67769097-67769116 | None:intergenic | 45.0% | |
| TCAGATTCCATCACCGTAAC+CGG | - | chr8.4:67766489-67766508 | None:intergenic | 45.0% | |
| TCTTCTAGCAATTCGGGGTT+GGG | + | chr8.4:67768663-67768682 | MS.gene79712:intron | 45.0% | |
| TGACAATGATGAACCCAACC+TGG | + | chr8.4:67767938-67767957 | MS.gene79712:CDS | 45.0% | |
| TGGACTATGAATTTGCGGCA+AGG | + | chr8.4:67769585-67769604 | MS.gene79712:CDS | 45.0% | |
| TGGTCTTCTGTTTGCAGTTG+GGG | + | chr8.4:67767316-67767335 | MS.gene79712:intron | 45.0% | |
| TTACACATTCACAGGTGGCA+AGG | + | chr8.4:67769649-67769668 | MS.gene79712:CDS | 45.0% | |
| TTCATCCAAGCTTGTCCTTG+AGG | + | chr8.4:67769223-67769242 | MS.gene79712:CDS | 45.0% | |
| TTCGAATGGGATGAGGGAAT+CGG | + | chr8.4:67768148-67768167 | MS.gene79712:CDS | 45.0% | |
| TTGAGCATTAAGACAGCACC+TGG | + | chr8.4:67768354-67768373 | MS.gene79712:CDS | 45.0% | |
| ! | ATGGAATCTGAATGGGCTCA+CGG | + | chr8.4:67766498-67766517 | MS.gene79712:CDS | 45.0% |
| ! | TGGGGAGTGGTGTGATTTTT+GGG | + | chr8.4:67767110-67767129 | MS.gene79712:intron | 45.0% |
| ! | TGTGGCTTCTGAAAATCAGG+AGG | + | chr8.4:67767391-67767410 | MS.gene79712:CDS | 45.0% |
| ! | TGTTCCAATTTGTTCCCGTC+TGG | + | chr8.4:67769422-67769441 | MS.gene79712:CDS | 45.0% |
| !! | CCATTGCTTTGGGCTGTTTT+TGG | + | chr8.4:67769529-67769548 | MS.gene79712:CDS | 45.0% |
| !! | GAATCAGGTTGAGGATCAAC+TGG | - | chr8.4:67766612-67766631 | None:intergenic | 45.0% |
| !!! | GGCTCTATTTTTCAAGGCAG+AGG | + | chr8.4:67769244-67769263 | MS.gene79712:CDS | 45.0% |
| !!! | AATGATTTTTTTTTTAATTA+TGG | + | chr8.4:67766905-67766924 | MS.gene79712:intron | 5.0% |
| !!! | ATGATTTTTTTTTTAATTAT+GGG | + | chr8.4:67766906-67766925 | MS.gene79712:intron | 5.0% |
| AGAGTAATCCATGCCCAGGT+TGG | - | chr8.4:67767955-67767974 | None:intergenic | 50.0% | |
| AGCAAATCCGAAATCGGCGT+CGG | - | chr8.4:67766535-67766554 | None:intergenic | 50.0% | |
| AGCTTTCGGCAGGTCATATG+AGG | - | chr8.4:67769164-67769183 | None:intergenic | 50.0% | |
| ATATTGCCTCTACTCCGGCT+AGG | - | chr8.4:67769004-67769023 | None:intergenic | 50.0% | |
| ATGCCCTCTCCAAGAAACGA+CGG | - | chr8.4:67769319-67769338 | None:intergenic | 50.0% | |
| ATGGACTTCGTTCATGGCTG+AGG | + | chr8.4:67769703-67769722 | MS.gene79712:CDS | 50.0% | |
| CAGCATCTTCTGATGCAACC+TGG | - | chr8.4:67769043-67769062 | None:intergenic | 50.0% | |
| CATAACCTCATCCTGGAACC+TGG | - | chr8.4:67768973-67768992 | None:intergenic | 50.0% | |
| CTCTTCTAGCAATTCGGGGT+TGG | + | chr8.4:67768662-67768681 | MS.gene79712:intron | 50.0% | |
| CTTCTAGCAATTCGGGGTTG+GGG | + | chr8.4:67768664-67768683 | MS.gene79712:intron | 50.0% | |
| GAAGATAGGCGAGAAGTCCT+AGG | + | chr8.4:67769110-67769129 | MS.gene79712:CDS | 50.0% | |
| GAATGGGAACCAACCTGACA+TGG | + | chr8.4:67767361-67767380 | MS.gene79712:CDS | 50.0% | |
| GACCTGCCGAAAGCTTAAGA+AGG | + | chr8.4:67769169-67769188 | MS.gene79712:CDS | 50.0% | |
| GACCTTCTTAAGCTTTCGGC+AGG | - | chr8.4:67769174-67769193 | None:intergenic | 50.0% | |
| GAGTAATCCATGCCCAGGTT+GGG | - | chr8.4:67767954-67767973 | None:intergenic | 50.0% | |
| GCATTTCACTTGGGTGGACA+AGG | + | chr8.4:67769461-67769480 | MS.gene79712:CDS | 50.0% | |
| GCCACACAATCATCCATGTC+AGG | - | chr8.4:67767377-67767396 | None:intergenic | 50.0% | |
| GCTTTCGGCAGGTCATATGA+GGG | - | chr8.4:67769163-67769182 | None:intergenic | 50.0% | |
| GTTATGAACTTGCCCCTAGC+CGG | + | chr8.4:67768987-67769006 | MS.gene79712:CDS | 50.0% | |
| GTTCAGAGTAATCCATGCCC+AGG | - | chr8.4:67767959-67767978 | None:intergenic | 50.0% | |
| GTTTGATCCGGTTACGGTGA+TGG | + | chr8.4:67766479-67766498 | MS.gene79712:CDS | 50.0% | |
| TAGACACCAGTACGGCAATC+TGG | + | chr8.4:67769088-67769107 | MS.gene79712:CDS | 50.0% | |
| TAGAGCCTCAAGGACAAGCT+TGG | - | chr8.4:67769231-67769250 | None:intergenic | 50.0% | |
| TATACTACACACTGCTGGCG+TGG | - | chr8.4:67769380-67769399 | None:intergenic | 50.0% | |
| TATGACCAGGTTCCAGGATG+AGG | + | chr8.4:67768965-67768984 | MS.gene79712:intron | 50.0% | |
| TATTGCCTCTACTCCGGCTA+GGG | - | chr8.4:67769003-67769022 | None:intergenic | 50.0% | |
| TCAGCCATGAACGAAGTCCA+TGG | - | chr8.4:67769704-67769723 | None:intergenic | 50.0% | |
| TCTCAGGCATTTCACTTGGG+TGG | + | chr8.4:67769455-67769474 | MS.gene79712:CDS | 50.0% | |
| TGAGAATAAACCCGGCCAGA+CGG | - | chr8.4:67769440-67769459 | None:intergenic | 50.0% | |
| TGCTTTGCCGCATCAGTTAG+TGG | - | chr8.4:67768534-67768553 | None:intergenic | 50.0% | |
| TTCTAGCAATTCGGGGTTGG+GGG | + | chr8.4:67768665-67768684 | MS.gene79712:intron | 50.0% | |
| ! | CTGGGGAGTGGTGTGATTTT+TGG | + | chr8.4:67767109-67767128 | MS.gene79712:intron | 50.0% |
| ! | GGGCTTTTAGCAGCCAAGAT+CGG | - | chr8.4:67768020-67768039 | None:intergenic | 50.0% |
| ! | GGGGAGTGGTGTGATTTTTG+GGG | + | chr8.4:67767111-67767130 | MS.gene79712:intron | 50.0% |
| ! | TAAGACAGCACCTGGTTTGC+TGG | + | chr8.4:67768362-67768381 | MS.gene79712:CDS | 50.0% |
| ! | TCACTGTCTGATGGTGAGCT+CGG | - | chr8.4:67769768-67769787 | None:intergenic | 50.0% |
| !! | AAGTGGGCTAGACACCAGTA+CGG | + | chr8.4:67769080-67769099 | MS.gene79712:CDS | 50.0% |
| !!! | TGGGCTGTTTTTGGGAATGC+AGG | + | chr8.4:67769538-67769557 | MS.gene79712:CDS | 50.0% |
| AGACACTAGATGGCAGCTCC+AGG | - | chr8.4:67768491-67768510 | None:intergenic | 55.0% | |
| ATTGCCTCTACTCCGGCTAG+GGG | - | chr8.4:67769002-67769021 | None:intergenic | 55.0% | |
| CAGAGGTTCCACATCGCCAA+CGG | + | chr8.4:67769261-67769280 | MS.gene79712:CDS | 55.0% | |
| CCTCGCCCAATCAGCAATAG+AGG | - | chr8.4:67766646-67766665 | None:intergenic | 55.0% | |
| GAGAATAAACCCGGCCAGAC+GGG | - | chr8.4:67769439-67769458 | None:intergenic | 55.0% | |
| GAGCCGTCGTTTCTTGGAGA+GGG | + | chr8.4:67769313-67769332 | MS.gene79712:CDS | 55.0% | |
| GGCAAGGTCAAGACCAACAG+AGG | + | chr8.4:67769601-67769620 | MS.gene79712:CDS | 55.0% | |
| GGCAGGTCATATGAGGGAAG+CGG | - | chr8.4:67769157-67769176 | None:intergenic | 55.0% | |
| GGGATCAGTGAGCTTCACTG+TGG | + | chr8.4:67769565-67769584 | MS.gene79712:CDS | 55.0% | |
| GTCTGGCCGGGTTTATTCTC+AGG | + | chr8.4:67769439-67769458 | MS.gene79712:CDS | 55.0% | |
| TGATGAACCCAACCTGGGCA+TGG | + | chr8.4:67767944-67767963 | MS.gene79712:CDS | 55.0% | |
| TTCACAGGTGGCAAGGCTGT+TGG | + | chr8.4:67769656-67769675 | MS.gene79712:CDS | 55.0% | |
| TTGCTCGAGCCGTCGTTTCT+TGG | + | chr8.4:67769307-67769326 | MS.gene79712:CDS | 55.0% | |
| ! | CAATTTGTTCCCGTCTGGCC+GGG | + | chr8.4:67769427-67769446 | MS.gene79712:CDS | 55.0% |
| ! | CCAATTTGTTCCCGTCTGGC+CGG | + | chr8.4:67769426-67769445 | MS.gene79712:CDS | 55.0% |
| ! | CCTCTATTGCTGATTGGGCG+AGG | + | chr8.4:67766643-67766662 | MS.gene79712:CDS | 55.0% |
| ! | GAATCTGAATGGGCTCACGG+TGG | + | chr8.4:67766501-67766520 | MS.gene79712:CDS | 55.0% |
| ! | TTGCTGATTGGGCGAGGCAT+CGG | + | chr8.4:67766649-67766668 | MS.gene79712:CDS | 55.0% |
| !! | TCTAGCTCCGACGCCGATTT+CGG | + | chr8.4:67766525-67766544 | MS.gene79712:CDS | 55.0% |
| AAACGACGGCTCGAGCAAGC+AGG | - | chr8.4:67769305-67769324 | None:intergenic | 60.0% | |
| AGCAATTCGGGGTTGGGGGT+GGG | + | chr8.4:67768669-67768688 | MS.gene79712:intron | 60.0% | |
| CCGGCCAGACGGGAACAAAT+TGG | - | chr8.4:67769429-67769448 | None:intergenic | 60.0% | |
| CGAGCCGTCGTTTCTTGGAG+AGG | + | chr8.4:67769312-67769331 | MS.gene79712:CDS | 60.0% | |
| CTTCAGCTGCCAGTGACCGT+TGG | - | chr8.4:67769280-67769299 | None:intergenic | 60.0% | |
| TAGCAATTCGGGGTTGGGGG+TGG | + | chr8.4:67768668-67768687 | MS.gene79712:intron | 60.0% | |
| TCCACATCGCCAACGGTCAC+TGG | + | chr8.4:67769268-67769287 | MS.gene79712:CDS | 60.0% | |
| ! | TGATGGTGAGCTCGGCCCTT+AGG | - | chr8.4:67769760-67769779 | None:intergenic | 60.0% |
| !! | ATTGGGCGAGGCATCGGAAG+AGG | + | chr8.4:67766655-67766674 | MS.gene79712:CDS | 60.0% |
| ATCGTGCAAGCCGCGAGCCT+AGG | - | chr8.4:67769130-67769149 | None:intergenic | 65.0% | |
| CTTGCCCCTAGCCGGAGTAG+AGG | + | chr8.4:67768995-67769014 | MS.gene79712:CDS | 65.0% | |
| GCAATTCGGGGTTGGGGGTG+GGG | + | chr8.4:67768670-67768689 | MS.gene79712:intron | 65.0% | |
| GCCAGTGACCGTTGGCGATG+TGG | - | chr8.4:67769272-67769291 | None:intergenic | 65.0% | |
| GGCGAGAAGTCCTAGGCTCG+CGG | + | chr8.4:67769117-67769136 | MS.gene79712:CDS | 65.0% | |
| ATTCGGGGTTGGGGGTGGGG+TGG | + | chr8.4:67768673-67768692 | MS.gene79712:intron | 70.0% | |
| TTCGGGGTTGGGGGTGGGGT+GGG | + | chr8.4:67768674-67768693 | MS.gene79712:intron | 70.0% | |
| TCGGGGTTGGGGGTGGGGTG+GGG | + | chr8.4:67768675-67768694 | MS.gene79712:intron | 75.0% | |
| ! | CGGGGTTGGGGGTGGGGTGG+GGG | + | chr8.4:67768676-67768695 | MS.gene79712:intron | 80.0% |
| ! | GGGGTTGGGGGTGGGGTGGG+GGG | + | chr8.4:67768677-67768696 | MS.gene79712:intron | 80.0% |
| ! | GGGTTGGGGGTGGGGTGGGG+GGG | + | chr8.4:67768678-67768697 | MS.gene79712:intron | 80.0% |
| ! | GGTTGGGGGTGGGGTGGGGG+GGG | + | chr8.4:67768679-67768698 | MS.gene79712:intron | 80.0% |
| ! | GGGGGTGGGGTGGGGGGGGT+GGG | + | chr8.4:67768683-67768702 | MS.gene79712:intron | 85.0% |
| ! | GGGGTGGGGTGGGGGGGGTG+GGG | + | chr8.4:67768684-67768703 | MS.gene79712:intron | 85.0% |
| ! | GGGTGGGGTGGGGGGGGTGG+GGG | + | chr8.4:67768685-67768704 | MS.gene79712:intron | 85.0% |
| ! | GGTGGGGTGGGGGGGGTGGG+GGG | + | chr8.4:67768686-67768705 | MS.gene79712:intron | 85.0% |
| ! | GTGGGGTGGGGGGGGTGGGG+GGG | + | chr8.4:67768687-67768706 | MS.gene79712:intron | 85.0% |
| ! | TGGGGGTGGGGTGGGGGGGG+TGG | + | chr8.4:67768682-67768701 | MS.gene79712:intron | 85.0% |
| ! | TGGGGTGGGGGGGGTGGGGG+GGG | + | chr8.4:67768688-67768707 | MS.gene79712:intron | 85.0% |
| ! | GGGGTGGGGGGGGTGGGGGG+GGG | + | chr8.4:67768689-67768708 | MS.gene79712:intron | 90.0% |
| ! | GGGTGGGGGGGGTGGGGGGG+GGG | + | chr8.4:67768690-67768709 | MS.gene79712:intron | 90.0% |
| ! | GGTGGGGGGGGTGGGGGGGG+GGG | + | chr8.4:67768691-67768710 | MS.gene79712:intron | 90.0% |
| ! | GTGGGGGGGGTGGGGGGGGG+GGG | + | chr8.4:67768692-67768711 | MS.gene79712:intron | 90.0% |
| ! | TGGGGGGGGTGGGGGGGGGG+GGG | + | chr8.4:67768693-67768712 | MS.gene79712:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 67766456 | 67769787 | 67766456 | ID=MS.gene79712 |
| chr8.4 | mRNA | 67766456 | 67769787 | 67766456 | ID=MS.gene79712.t1;Parent=MS.gene79712 |
| chr8.4 | exon | 67766456 | 67766705 | 67766456 | ID=MS.gene79712.t1.exon1;Parent=MS.gene79712.t1 |
| chr8.4 | CDS | 67766456 | 67766705 | 67766456 | ID=cds.MS.gene79712.t1;Parent=MS.gene79712.t1 |
| chr8.4 | exon | 67767333 | 67767449 | 67767333 | ID=MS.gene79712.t1.exon2;Parent=MS.gene79712.t1 |
| chr8.4 | CDS | 67767333 | 67767449 | 67767333 | ID=cds.MS.gene79712.t1;Parent=MS.gene79712.t1 |
| chr8.4 | exon | 67767922 | 67768052 | 67767922 | ID=MS.gene79712.t1.exon3;Parent=MS.gene79712.t1 |
| chr8.4 | CDS | 67767922 | 67768052 | 67767922 | ID=cds.MS.gene79712.t1;Parent=MS.gene79712.t1 |
| chr8.4 | exon | 67768143 | 67768206 | 67768143 | ID=MS.gene79712.t1.exon4;Parent=MS.gene79712.t1 |
| chr8.4 | CDS | 67768143 | 67768206 | 67768143 | ID=cds.MS.gene79712.t1;Parent=MS.gene79712.t1 |
| chr8.4 | exon | 67768307 | 67768586 | 67768307 | ID=MS.gene79712.t1.exon5;Parent=MS.gene79712.t1 |
| chr8.4 | CDS | 67768307 | 67768586 | 67768307 | ID=cds.MS.gene79712.t1;Parent=MS.gene79712.t1 |
| chr8.4 | exon | 67768974 | 67769787 | 67768974 | ID=MS.gene79712.t1.exon6;Parent=MS.gene79712.t1 |
| chr8.4 | CDS | 67768974 | 67769787 | 67768974 | ID=cds.MS.gene79712.t1;Parent=MS.gene79712.t1 |
| Gene Sequence |
| Protein sequence |
