Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59617.t1 | XP_013444715.1 | 99.3 | 551 | 4 | 0 | 1 | 551 | 1 | 551 | 0.00E+00 | 1090.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59617.t1 | Q9FPW6 | 79.6 | 554 | 103 | 5 | 5 | 551 | 7 | 557 | 1.0e-248 | 860.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59617.t1 | G7ZYQ8 | 99.3 | 551 | 4 | 0 | 1 | 551 | 1 | 551 | 0.0e+00 | 1090.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050257 | MS.gene59617 | 0.815508 | 8.92E-52 | -1.69E-46 |
| MS.gene050258 | MS.gene59617 | 0.813274 | 2.78E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene59617 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene59617 | 0.813069 | 3.08E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene59617 | 0.817925 | 2.56E-52 | -1.69E-46 |
| MS.gene054709 | MS.gene59617 | 0.801078 | 1.07E-48 | -1.69E-46 |
| MS.gene056519 | MS.gene59617 | 0.802415 | 5.67E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene59617 | 0.844235 | 8.57E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene59617 | 0.805437 | 1.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92133 | MS.gene59617 | PPI |
| MS.gene98180 | MS.gene59617 | PPI |
| MS.gene79712 | MS.gene59617 | PPI |
| MS.gene59617 | MS.gene92133 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59617.t1 | MTR_8g028190 | 99.274 | 551 | 4 | 0 | 1 | 551 | 1 | 551 | 0.0 | 1139 |
| MS.gene59617.t1 | MTR_8g028190 | 97.853 | 559 | 4 | 1 | 1 | 551 | 1 | 559 | 0.0 | 1131 |
| MS.gene59617.t1 | MTR_8g028190 | 92.555 | 591 | 4 | 1 | 1 | 551 | 1 | 591 | 0.0 | 1097 |
| MS.gene59617.t1 | MTR_4g088460 | 52.083 | 192 | 73 | 4 | 78 | 269 | 10 | 182 | 1.15e-46 | 167 |
| MS.gene59617.t1 | MTR_4g088460 | 55.469 | 128 | 31 | 1 | 399 | 526 | 203 | 304 | 1.17e-38 | 145 |
| MS.gene59617.t1 | MTR_7g116800 | 52.632 | 76 | 31 | 2 | 22 | 96 | 12 | 83 | 1.07e-15 | 73.9 |
| MS.gene59617.t1 | MTR_7g116810 | 55.556 | 63 | 27 | 1 | 22 | 83 | 105 | 167 | 2.78e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59617.t1 | AT3G61600 | 79.603 | 554 | 103 | 5 | 5 | 551 | 7 | 557 | 0.0 | 899 |
| MS.gene59617.t1 | AT3G61600 | 79.603 | 554 | 103 | 5 | 5 | 551 | 7 | 557 | 0.0 | 899 |
| MS.gene59617.t1 | AT2G46260 | 78.919 | 555 | 105 | 6 | 5 | 551 | 6 | 556 | 0.0 | 888 |
| MS.gene59617.t1 | AT4G01160 | 58.769 | 536 | 199 | 9 | 24 | 550 | 4 | 526 | 0.0 | 590 |
| MS.gene59617.t1 | AT4G01160 | 58.505 | 535 | 180 | 8 | 24 | 550 | 4 | 504 | 0.0 | 588 |
Find 159 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGCTTTGGGCTGTTCT+TGG | 0.161275 | 8.1:+73587962 | MS.gene59617:CDS |
| GATTGTCTTTACTTCATTAA+TGG | 0.228738 | 8.1:+73588158 | MS.gene59617:CDS |
| TTGCTCGAGCCGTCGTTTCT+TGG | 0.232570 | 8.1:+73587740 | MS.gene59617:CDS |
| CCAGCAGTGTGTAGTATATT+TGG | 0.271055 | 8.1:+73587815 | MS.gene59617:CDS |
| CAAAGTTCTTTCCATTGCTT+TGG | 0.271545 | 8.1:+73587951 | MS.gene59617:CDS |
| ATGATAGTAATTTCTCTGAT+AGG | 0.288454 | 8.1:+73584847 | MS.gene59617:CDS |
| CATTGCTTTGGGCTGTTCTT+GGG | 0.288796 | 8.1:+73587963 | MS.gene59617:CDS |
| TAAGACAGCACCTGGTTTGC+TGG | 0.309622 | 8.1:+73586684 | MS.gene59617:CDS |
| TGAAGCAACTTCAAATTTAT+CGG | 0.325451 | 8.1:-73586722 | None:intergenic |
| GATTCCATGGACTTCGTTCA+TGG | 0.328777 | 8.1:+73588130 | MS.gene59617:CDS |
| TCTAGCTCCGACGCCGATTT+CGG | 0.333073 | 8.1:+73584813 | MS.gene59617:CDS |
| TAAAAGCCCGTTCTTCTATA+AGG | 0.350419 | 8.1:+73586353 | MS.gene59617:CDS |
| CCGGCCAGACGGGAACAAAT+TGG | 0.356600 | 8.1:-73587859 | None:intergenic |
| TTAAGACCTTCTTAAGCTTT+CGG | 0.371733 | 8.1:-73587608 | None:intergenic |
| CATGTATATGACCAGGTTCC+AGG | 0.374160 | 8.1:+73587392 | MS.gene59617:intron |
| TTGTACCTCTATTGCTGATT+GGG | 0.388063 | 8.1:+73584926 | MS.gene59617:CDS |
| TCGGATTCCATCACCGTAAC+CGG | 0.388093 | 8.1:-73584774 | None:intergenic |
| TGCTTTGCCGCATCAGTTAG+TGG | 0.388482 | 8.1:-73586853 | None:intergenic |
| GCTGCCATCTAGTGTCTTAA+TGG | 0.391173 | 8.1:+73586816 | MS.gene59617:CDS |
| GTCTGGCCGGGTTTATTCTC+AGG | 0.392633 | 8.1:+73587872 | MS.gene59617:CDS |
| AAAGTTCTTTCCATTGCTTT+GGG | 0.394503 | 8.1:+73587952 | MS.gene59617:CDS |
| CCAATTTGTTCCCGTCTGGC+CGG | 0.395141 | 8.1:+73587859 | MS.gene59617:CDS |
| CAATTTGTTCCCGTCTGGCC+GGG | 0.395259 | 8.1:+73587860 | MS.gene59617:CDS |
| AGCTTTCGGCAGGTCATATG+AGG | 0.407830 | 8.1:-73587594 | None:intergenic |
| ATTGTACCTCTATTGCTGAT+TGG | 0.409104 | 8.1:+73584925 | MS.gene59617:CDS |
| CTTGACAGGACGATATTTGT+AGG | 0.415350 | 8.1:-73587769 | None:intergenic |
| TGTTCCAATTTGTTCCCGTC+TGG | 0.416143 | 8.1:+73587855 | MS.gene59617:CDS |
| GAATCAGGTTGAGGATCAAC+TGG | 0.418846 | 8.1:-73584897 | None:intergenic |
| TATCTTCCAGATTGCCGTAC+TGG | 0.419089 | 8.1:-73587527 | None:intergenic |
| TTATTCTCAGGCATTTCACT+TGG | 0.423250 | 8.1:+73587884 | MS.gene59617:CDS |
| ATGGTTGAAGAATCCCCTTC+TGG | 0.431713 | 8.1:+73585721 | MS.gene59617:CDS |
| ACCCTCAGAATTAATGCTTC+TGG | 0.431935 | 8.1:+73586507 | MS.gene59617:CDS |
| CACTGTGGACTATGAATTTG+CGG | 0.433172 | 8.1:+73588013 | MS.gene59617:CDS |
| AGGTAAAGCAATGCAGATTC+AGG | 0.434966 | 8.1:-73586790 | None:intergenic |
| CCATTCAAAATCTGCTCATC+CGG | 0.435073 | 8.1:-73585637 | None:intergenic |
| CGATCTGTTTGATCCGGTTA+CGG | 0.437284 | 8.1:+73584761 | MS.gene59617:CDS |
| ACATATCAGTTCTCCGATCT+TGG | 0.439435 | 8.1:+73586326 | MS.gene59617:CDS |
| GTTCTTGGGAATGCAGGAAA+AGG | 0.441652 | 8.1:+73587977 | MS.gene59617:CDS |
| TGGGCTGTTCTTGGGAATGC+AGG | 0.448607 | 8.1:+73587971 | MS.gene59617:CDS |
| TTAATGGCGTTCTGCACCTA+AGG | 0.448670 | 8.1:+73588174 | MS.gene59617:CDS |
| TGATGGTGAGCTCGGCCCTT+AGG | 0.450312 | 8.1:-73588190 | None:intergenic |
| TGAATCTGCATTGCTTTACC+TGG | 0.451325 | 8.1:+73586792 | MS.gene59617:CDS |
| TGATAGTAATTTCTCTGATA+GGG | 0.451951 | 8.1:+73584848 | MS.gene59617:CDS |
| GAATTCCGATCTGTTTGATC+CGG | 0.452265 | 8.1:+73584755 | MS.gene59617:CDS |
| AGAACCACCGTGAGCCCATT+CGG | 0.453849 | 8.1:-73584793 | None:intergenic |
| TTCGAATGGGATGAGGGAAT+CGG | 0.454577 | 8.1:+73586470 | MS.gene59617:CDS |
| GGTCTACCTTATAGAAGAAC+GGG | 0.455173 | 8.1:-73586359 | None:intergenic |
| TCAAATTCAACCACCTTGAC+AGG | 0.458404 | 8.1:-73587783 | None:intergenic |
| AGTACGGCAATCTGGAAGAT+AGG | 0.459958 | 8.1:+73587529 | MS.gene59617:CDS |
| ATGGACTTCGTTCATGGCTG+AGG | 0.461086 | 8.1:+73588136 | MS.gene59617:CDS |
| GTTTGATCCGGTTACGGTGA+TGG | 0.462190 | 8.1:+73584767 | MS.gene59617:CDS |
| TCAGCCATTAAGACACTAGA+TGG | 0.468273 | 8.1:-73586820 | None:intergenic |
| ATTGAAAGCAAATCCGAAAT+CGG | 0.472219 | 8.1:-73584826 | None:intergenic |
| GAAACTTGTTTGCGATTCCA+TGG | 0.474206 | 8.1:+73588117 | MS.gene59617:CDS |
| GAGTAATCCATGCCCAGGTT+GGG | 0.476612 | 8.1:-73586273 | None:intergenic |
| TAGACACCAGTACGGCAATC+TGG | 0.477520 | 8.1:+73587521 | MS.gene59617:CDS |
| GCATTTCACTTGGGTGGACA+AGG | 0.479220 | 8.1:+73587894 | MS.gene59617:CDS |
| TTGTGTGGCTTCTGAAAATC+AGG | 0.481870 | 8.1:+73585681 | MS.gene59617:CDS |
| TATTGCCTCTACTCCGGGTA+GGG | 0.482309 | 8.1:-73587433 | None:intergenic |
| GAGAATAAACCCGGCCAGAC+GGG | 0.491594 | 8.1:-73587869 | None:intergenic |
| TTTATGACTTTGTGCTGAAG+TGG | 0.491647 | 8.1:+73587496 | MS.gene59617:CDS |
| TTGCTGATTGGGCGAGGCAT+CGG | 0.492519 | 8.1:+73584937 | MS.gene59617:CDS |
| TCCACATCGCCAACGGTCAC+TGG | 0.493627 | 8.1:+73587701 | MS.gene59617:CDS |
| TGACAATGATGAACCCAACC+TGG | 0.493819 | 8.1:+73586260 | MS.gene59617:CDS |
| GCTTGGTTATATCCTTGTAT+CGG | 0.494386 | 8.1:-73586888 | None:intergenic |
| ATTGGGCGAGGCATCGGAAG+AGG | 0.494867 | 8.1:+73584943 | MS.gene59617:CDS |
| TACAGAAGAAGCTGCTCTCA+TGG | 0.502881 | 8.1:+73586624 | MS.gene59617:intron |
| TTCATCCAAGCTTGTCCTTG+AGG | 0.503077 | 8.1:+73587656 | MS.gene59617:CDS |
| CAGCATCTTCTGATGCAACC+TGG | 0.506247 | 8.1:-73587473 | None:intergenic |
| CCTCGCCCAATCAGCAATAG+AGG | 0.508375 | 8.1:-73584931 | None:intergenic |
| AGATAATATTGCCTCTACTC+CGG | 0.509117 | 8.1:-73587439 | None:intergenic |
| TAGAGCCTCAAGGACAAGCT+TGG | 0.509349 | 8.1:-73587661 | None:intergenic |
| GAAGATATCAAGAAAGAAAA+CGG | 0.509506 | 8.1:+73584972 | MS.gene59617:CDS |
| GATAATATTGCCTCTACTCC+GGG | 0.512000 | 8.1:-73587438 | None:intergenic |
| TTGCTAACAAACTCCTCTGT+TGG | 0.513889 | 8.1:-73588047 | None:intergenic |
| AGAGTAATCCATGCCCAGGT+TGG | 0.514979 | 8.1:-73586274 | None:intergenic |
| ATCAAAACATCCAGCAAACC+AGG | 0.518936 | 8.1:-73586694 | None:intergenic |
| GCCACACAATCATCCATGTC+AGG | 0.519496 | 8.1:-73585667 | None:intergenic |
| GACCTTCTTAAGCTTTCGGC+AGG | 0.520979 | 8.1:-73587604 | None:intergenic |
| CTTCAGCTGCCAGTGACCGT+TGG | 0.521484 | 8.1:-73587710 | None:intergenic |
| TACCAGAAGCATTAATTCTG+AGG | 0.521501 | 8.1:-73586509 | None:intergenic |
| ATTATCTAGTGATGATCTCC+AGG | 0.523124 | 8.1:+73587455 | MS.gene59617:CDS |
| TTCACAGGTGGCAAGGCTGT+TGG | 0.524034 | 8.1:+73588089 | MS.gene59617:CDS |
| CCTCTATTGCTGATTGGGCG+AGG | 0.527454 | 8.1:+73584931 | MS.gene59617:CDS |
| GAAGATAGGCGAGAAGTCCT+AGG | 0.528020 | 8.1:+73587543 | MS.gene59617:CDS |
| TACGGTGATGGAATCCGAAT+GGG | 0.528236 | 8.1:+73584779 | MS.gene59617:CDS |
| AGATCGGAGAACTGATATGT+AGG | 0.529172 | 8.1:-73586323 | None:intergenic |
| GTTTGCAGTTGGGGATCTGC+CGG | 0.535396 | 8.1:+73585618 | MS.gene59617:intron |
| AGACACTAGATGGCAGCTCC+AGG | 0.539810 | 8.1:-73586810 | None:intergenic |
| ATCGTGCAAGCCGCGAGCCT+AGG | 0.541327 | 8.1:-73587560 | None:intergenic |
| GAGCCGTCGTTTCTTGGAGA+GGG | 0.541603 | 8.1:+73587746 | MS.gene59617:CDS |
| TCTCAGGCATTTCACTTGGG+TGG | 0.543562 | 8.1:+73587888 | MS.gene59617:CDS |
| TTCTTGGGAATGCAGGAAAA+GGG | 0.543836 | 8.1:+73587978 | MS.gene59617:CDS |
| TGATGAACCCAACCTGGGCA+TGG | 0.549556 | 8.1:+73586266 | MS.gene59617:CDS |
| TATTCTCAGGCATTTCACTT+GGG | 0.551671 | 8.1:+73587885 | MS.gene59617:CDS |
| GTATCTTGCTAGCCGATACA+AGG | 0.552442 | 8.1:+73586876 | MS.gene59617:CDS |
| GCAAGTTCATAACCTCGTCC+TGG | 0.553916 | 8.1:-73587410 | None:intergenic |
| ACCAGAAGCATTAATTCTGA+GGG | 0.556125 | 8.1:-73586508 | None:intergenic |
| GTTATGAACTTGCCCCTACC+CGG | 0.556373 | 8.1:+73587420 | MS.gene59617:CDS |
| TTATGACTTTGTGCTGAAGT+GGG | 0.557998 | 8.1:+73587497 | MS.gene59617:CDS |
| TTGAGCATTAAGACAGCACC+TGG | 0.559659 | 8.1:+73586676 | MS.gene59617:CDS |
| ATCATGTTCAAAGTCACTAC+AGG | 0.559974 | 8.1:-73587631 | None:intergenic |
| AAACGACGGCTCGAGCAAGC+AGG | 0.559982 | 8.1:-73587735 | None:intergenic |
| CCAAGAACAGCCCAAAGCAA+TGG | 0.560301 | 8.1:-73587962 | None:intergenic |
| ATTGCCTCTACTCCGGGTAG+GGG | 0.561546 | 8.1:-73587432 | None:intergenic |
| AAAGGCAATTACACATTCAC+AGG | 0.562583 | 8.1:+73588074 | MS.gene59617:CDS |
| GGAGGAAGAAGTTGTTGCAA+TGG | 0.563065 | 8.1:+73585702 | MS.gene59617:CDS |
| GATCGGAGAACTGATATGTA+GGG | 0.564273 | 8.1:-73586322 | None:intergenic |
| CACAATCATCCATGTCAGGT+TGG | 0.565888 | 8.1:-73585663 | None:intergenic |
| TGGTCTACCTTATAGAAGAA+CGG | 0.566150 | 8.1:-73586360 | None:intergenic |
| TATGACCAGGTTCCAGGACG+AGG | 0.568225 | 8.1:+73587398 | MS.gene59617:intron |
| TATACTACACACTGCTGGCG+TGG | 0.568228 | 8.1:-73587810 | None:intergenic |
| GAATGGGAACCAACCTGACA+TGG | 0.568779 | 8.1:+73585654 | MS.gene59617:CDS |
| ATATTGCCTCTACTCCGGGT+AGG | 0.570544 | 8.1:-73587434 | None:intergenic |
| CGAGCCGTCGTTTCTTGGAG+AGG | 0.571750 | 8.1:+73587745 | MS.gene59617:CDS |
| TCAGCCATGAACGAAGTCCA+TGG | 0.573234 | 8.1:-73588134 | None:intergenic |
| AGTATATTTGGATCTAAAGC+GGG | 0.573614 | 8.1:+73587827 | MS.gene59617:CDS |
| CTTGCCCCTACCCGGAGTAG+AGG | 0.576563 | 8.1:+73587428 | MS.gene59617:CDS |
| CATGCATGAGATATTGTAGT+CGG | 0.582698 | 8.1:+73586743 | MS.gene59617:CDS |
| CATTTCACTTGGGTGGACAA+GGG | 0.583090 | 8.1:+73587895 | MS.gene59617:CDS |
| GTTCAGAGTAATCCATGCCC+AGG | 0.587746 | 8.1:-73586278 | None:intergenic |
| CCAAATATACTACACACTGC+TGG | 0.588348 | 8.1:-73587815 | None:intergenic |
| GGCAGGTCATATGAGGGAAG+CGG | 0.590638 | 8.1:-73587587 | None:intergenic |
| TCTGTCAGCACATTGTAACA+TGG | 0.590755 | 8.1:+73587923 | MS.gene59617:CDS |
| TTACACATTCACAGGTGGCA+AGG | 0.596424 | 8.1:+73588082 | MS.gene59617:CDS |
| GCCAGTGACCGTTGGCGATG+TGG | 0.596471 | 8.1:-73587702 | None:intergenic |
| GACCTGCCGAAAGCTTAAGA+AGG | 0.596935 | 8.1:+73587602 | MS.gene59617:CDS |
| TGAGAATAAACCCGGCCAGA+CGG | 0.599156 | 8.1:-73587870 | None:intergenic |
| TCACTGTCTGATGGTGAGCT+CGG | 0.599457 | 8.1:-73588198 | None:intergenic |
| ATGGAATCCGAATGGGCTCA+CGG | 0.599542 | 8.1:+73584786 | MS.gene59617:CDS |
| AATTAAGATAATACCAGAAG+GGG | 0.600741 | 8.1:-73585734 | None:intergenic |
| AGCAAATCCGAAATCGGCGT+CGG | 0.603564 | 8.1:-73584820 | None:intergenic |
| CTACAAATATCGTCCTGTCA+AGG | 0.605170 | 8.1:+73587770 | MS.gene59617:CDS |
| GACAATGATGAACCCAACCT+GGG | 0.609287 | 8.1:+73586261 | MS.gene59617:CDS |
| CAATTAAGATAATACCAGAA+GGG | 0.610310 | 8.1:-73585735 | None:intergenic |
| GAAATGCCTGAGAATAAACC+CGG | 0.615264 | 8.1:-73587878 | None:intergenic |
| GCATGTGTGTCACTGTCTGA+TGG | 0.616189 | 8.1:-73588207 | None:intergenic |
| TAATGGCGTTCTGCACCTAA+GGG | 0.617222 | 8.1:+73588175 | MS.gene59617:CDS |
| TAGTATATTTGGATCTAAAG+CGG | 0.623586 | 8.1:+73587826 | MS.gene59617:CDS |
| TTACGGTGATGGAATCCGAA+TGG | 0.628209 | 8.1:+73584778 | MS.gene59617:CDS |
| AGGTTGAGGATCAACTGGAT+CGG | 0.629008 | 8.1:-73584892 | None:intergenic |
| ACCTGACATGGATGATTGTG+TGG | 0.633757 | 8.1:+73585666 | MS.gene59617:CDS |
| CAGAGGTTCCACATCGCCAA+CGG | 0.635240 | 8.1:+73587694 | MS.gene59617:CDS |
| GGCAATTACACATTCACAGG+TGG | 0.644944 | 8.1:+73588077 | MS.gene59617:CDS |
| CAAATATCGTCCTGTCAAGG+TGG | 0.646878 | 8.1:+73587773 | MS.gene59617:CDS |
| GCTTTCGGCAGGTCATATGA+GGG | 0.650096 | 8.1:-73587593 | None:intergenic |
| GGCAAGGTCAAGACCAACAG+AGG | 0.655375 | 8.1:+73588034 | MS.gene59617:CDS |
| GAGTTTGTTAGCAAATACAA+AGG | 0.660955 | 8.1:+73588056 | MS.gene59617:CDS |
| TGGACTATGAATTTGCGGCA+AGG | 0.662962 | 8.1:+73588018 | MS.gene59617:CDS |
| ATATTTGGATCTAAAGCGGG+AGG | 0.670761 | 8.1:+73587830 | MS.gene59617:CDS |
| AAATGTTAACATAGGTGATG+AGG | 0.675883 | 8.1:+73586230 | MS.gene59617:intron |
| AAGTGGGCTAGACACCAGTA+CGG | 0.677973 | 8.1:+73587513 | MS.gene59617:CDS |
| GGCGAGAAGTCCTAGGCTCG+CGG | 0.680972 | 8.1:+73587550 | MS.gene59617:CDS |
| CGTAACCGGATCAAACAGAT+CGG | 0.681842 | 8.1:-73584760 | None:intergenic |
| TGTGGCTTCTGAAAATCAGG+AGG | 0.690006 | 8.1:+73585684 | MS.gene59617:CDS |
| AGTTCAACCACTAACTGATG+CGG | 0.693530 | 8.1:+73586846 | MS.gene59617:CDS |
| GGGATCAGTGAGCTTCACTG+TGG | 0.699432 | 8.1:+73587998 | MS.gene59617:CDS |
| AGGCCCTCTCCAAGAAACGA+CGG | 0.740044 | 8.1:-73587749 | None:intergenic |
| GAATCCGAATGGGCTCACGG+TGG | 0.791791 | 8.1:+73584789 | MS.gene59617:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATCAATATATGAAATAA+GGG | + | chr8.1:73585957-73585976 | MS.gene59617:intron | 15.0% |
| !!! | AAAATTGAAATTTTTCTTGA+TGG | + | chr8.1:73585110-73585129 | MS.gene59617:intron | 15.0% |
| !!! | AAATTGAAATTTTTCTTGAT+GGG | + | chr8.1:73585111-73585130 | MS.gene59617:intron | 15.0% |
| !!! | AATAATTGGATTTTTTGTTA+TGG | + | chr8.1:73585026-73585045 | MS.gene59617:intron | 15.0% |
| !!! | ATAATTGGATTTTTTGTTAT+GGG | + | chr8.1:73585027-73585046 | MS.gene59617:intron | 15.0% |
| !!! | ATTTTTTTTTAATGATCTGT+TGG | + | chr8.1:73585074-73585093 | MS.gene59617:intron | 15.0% |
| !!! | TTTATTTATTTATTTTGGGT+TGG | + | chr8.1:73585158-73585177 | MS.gene59617:intron | 15.0% |
| !!! | TTTCATTTTTGTTGAATAAT+TGG | + | chr8.1:73585012-73585031 | MS.gene59617:intron | 15.0% |
| !! | ACCAAATGTAAATATAAATC+TGG | + | chr8.1:73585365-73585384 | MS.gene59617:intron | 20.0% |
| !! | ATATAAAGATATAGAGAAGT+TGG | - | chr8.1:73586383-73586402 | None:intergenic | 20.0% |
| !! | ATCACTATTTGAAGAAAAAT+TGG | + | chr8.1:73585293-73585312 | MS.gene59617:intron | 20.0% |
| !! | CACTATCAATATATGAAATA+AGG | + | chr8.1:73585956-73585975 | MS.gene59617:intron | 20.0% |
| !! | TAATTATGGGTTTATTTGTT+AGG | + | chr8.1:73585208-73585227 | MS.gene59617:intron | 20.0% |
| !! | TCCAGATTTATATTTACATT+TGG | - | chr8.1:73585369-73585388 | None:intergenic | 20.0% |
| !!! | AATAAGGGTATAATTTACTA+AGG | + | chr8.1:73585972-73585991 | MS.gene59617:intron | 20.0% |
| !!! | AATTATGGGTTTATTTGTTA+GGG | + | chr8.1:73585209-73585228 | MS.gene59617:intron | 20.0% |
| !!! | GATTTTGAAAATGTTAACAT+AGG | + | chr8.1:73586222-73586241 | MS.gene59617:intron | 20.0% |
| !!! | TTAGATTTGTAGATGTTTTT+AGG | + | chr8.1:73585260-73585279 | MS.gene59617:intron | 20.0% |
| !!! | TTATGTGATATTTTTGTGTA+TGG | + | chr8.1:73585514-73585533 | MS.gene59617:intron | 20.0% |
| !!! | TTTCTTTTGTAGTTTTTCAT+TGG | + | chr8.1:73587327-73587346 | MS.gene59617:intron | 20.0% |
| ! | AAAGAATGGAAAGTTCAATA+AGG | - | chr8.1:73587293-73587312 | None:intergenic | 25.0% |
| ! | AAATGGAAGATACAAACAAA+GGG | - | chr8.1:73585847-73585866 | None:intergenic | 25.0% |
| ! | AATTAAGATAATACCAGAAG+GGG | - | chr8.1:73585737-73585756 | None:intergenic | 25.0% |
| ! | AGAACTTCTTAAAAGAGAAA+AGG | - | chr8.1:73587016-73587035 | None:intergenic | 25.0% |
| ! | ATGATAGTAATTTCTCTGAT+AGG | + | chr8.1:73584847-73584866 | MS.gene59617:CDS | 25.0% |
| ! | ATTTGAAAGTGATTGTTTAC+TGG | + | chr8.1:73585438-73585457 | MS.gene59617:intron | 25.0% |
| ! | CAATTAAGATAATACCAGAA+GGG | - | chr8.1:73585738-73585757 | None:intergenic | 25.0% |
| ! | CGTGAAATATATAAACAAAG+GGG | - | chr8.1:73585823-73585842 | None:intergenic | 25.0% |
| ! | CTATTTGAAGAAAAATTGGT+TGG | + | chr8.1:73585297-73585316 | MS.gene59617:intron | 25.0% |
| ! | GAAGATATCAAGAAAGAAAA+CGG | + | chr8.1:73584972-73584991 | MS.gene59617:CDS | 25.0% |
| ! | GATTGTCTTTACTTCATTAA+TGG | + | chr8.1:73588158-73588177 | MS.gene59617:CDS | 25.0% |
| ! | GCGTGAAATATATAAACAAA+GGG | - | chr8.1:73585824-73585843 | None:intergenic | 25.0% |
| ! | TAAAAAAACAAACACTTGCT+TGG | - | chr8.1:73586908-73586927 | None:intergenic | 25.0% |
| ! | TACTTGAGTTATTACTTGTT+AGG | + | chr8.1:73585763-73585782 | MS.gene59617:intron | 25.0% |
| ! | TAGTATATTTGGATCTAAAG+CGG | + | chr8.1:73587826-73587845 | MS.gene59617:CDS | 25.0% |
| ! | TGAAGCAACTTCAAATTTAT+CGG | - | chr8.1:73586725-73586744 | None:intergenic | 25.0% |
| ! | TGATAGTAATTTCTCTGATA+GGG | + | chr8.1:73584848-73584867 | MS.gene59617:CDS | 25.0% |
| ! | TGTTGTAACCTGATATTATA+TGG | + | chr8.1:73585589-73585608 | MS.gene59617:intron | 25.0% |
| ! | TTTGAAAGTGATTGTTTACT+GGG | + | chr8.1:73585439-73585458 | MS.gene59617:intron | 25.0% |
| !! | AAAACGGTATTTTTCTTTCT+AGG | + | chr8.1:73584988-73585007 | MS.gene59617:intron | 25.0% |
| !! | CTGCTAAGAAAACATATTTT+TGG | - | chr8.1:73586425-73586444 | None:intergenic | 25.0% |
| !! | GTTTCTAGGTAAATGAAAAT+AGG | + | chr8.1:73585231-73585250 | MS.gene59617:intron | 25.0% |
| !! | TGTGTATGTTTTCTGTTAAT+GGG | + | chr8.1:73585337-73585356 | MS.gene59617:intron | 25.0% |
| !! | TTGTGTATGTTTTCTGTTAA+TGG | + | chr8.1:73585336-73585355 | MS.gene59617:intron | 25.0% |
| !!! | AAAATGCTTGGTTCTTTTAA+TGG | + | chr8.1:73585476-73585495 | MS.gene59617:intron | 25.0% |
| !!! | AGTAAGTTCTTGTTTTATAG+TGG | + | chr8.1:73585878-73585897 | MS.gene59617:intron | 25.0% |
| !!! | ATTTTAGAGAACTCTATTGT+TGG | + | chr8.1:73587223-73587242 | MS.gene59617:intron | 25.0% |
| !!! | CATGTGTTTTTTCTAAAGAA+TGG | - | chr8.1:73587307-73587326 | None:intergenic | 25.0% |
| !!! | CTTTTAATGGATAGATGTTT+GGG | + | chr8.1:73585489-73585508 | MS.gene59617:intron | 25.0% |
| !!! | GATTTTGAAAATGTTAACCT+AGG | + | chr8.1:73586102-73586121 | MS.gene59617:intron | 25.0% |
| !!! | GTAAGTTCTTGTTTTATAGT+GGG | + | chr8.1:73585879-73585898 | MS.gene59617:intron | 25.0% |
| !!! | TAAGTTCTTGTTTTATAGTG+GGG | + | chr8.1:73585880-73585899 | MS.gene59617:intron | 25.0% |
| !!! | TCTTTTAATGGATAGATGTT+TGG | + | chr8.1:73585488-73585507 | MS.gene59617:intron | 25.0% |
| !!! | TGTGATTTTTGGGTTTTTTT+GGG | + | chr8.1:73585395-73585414 | MS.gene59617:intron | 25.0% |
| AAAGTTCTTTCCATTGCTTT+GGG | + | chr8.1:73587952-73587971 | MS.gene59617:CDS | 30.0% | |
| AAATGTTAACATAGGTGATG+AGG | + | chr8.1:73586230-73586249 | MS.gene59617:intron | 30.0% | |
| AATGGAAGATACAAACAAAG+GGG | - | chr8.1:73585846-73585865 | None:intergenic | 30.0% | |
| ACAGAAGACCATATAATATC+AGG | - | chr8.1:73585600-73585619 | None:intergenic | 30.0% | |
| AGTGATGATCTTCAAAATCA+TGG | - | chr8.1:73585940-73585959 | None:intergenic | 30.0% | |
| ATATAAACAAAGGGGCAATA+GGG | - | chr8.1:73585815-73585834 | None:intergenic | 30.0% | |
| ATTGAAAGCAAATCCGAAAT+CGG | - | chr8.1:73584829-73584848 | None:intergenic | 30.0% | |
| CAAAGTTACAGAAAAATGCT+TGG | + | chr8.1:73585464-73585483 | MS.gene59617:intron | 30.0% | |
| CTAGGTAAATGAAAATAGGT+TGG | + | chr8.1:73585235-73585254 | MS.gene59617:intron | 30.0% | |
| GAAATGGAAGATACAAACAA+AGG | - | chr8.1:73585848-73585867 | None:intergenic | 30.0% | |
| GCAATTAAGATAATACCAGA+AGG | - | chr8.1:73585739-73585758 | None:intergenic | 30.0% | |
| GGCGTGAAATATATAAACAA+AGG | - | chr8.1:73585825-73585844 | None:intergenic | 30.0% | |
| GTAAATATAAATCTGGAGAG+TGG | + | chr8.1:73585372-73585391 | MS.gene59617:intron | 30.0% | |
| TATACATCATGTATATGACC+AGG | + | chr8.1:73587385-73587404 | MS.gene59617:intron | 30.0% | |
| TATATAAACAAAGGGGCAAT+AGG | - | chr8.1:73585816-73585835 | None:intergenic | 30.0% | |
| TGAAGAAAAATTGGTTGGAA+GGG | + | chr8.1:73585302-73585321 | MS.gene59617:intron | 30.0% | |
| TGAGGGCAAATAAAATGATA+AGG | - | chr8.1:73586567-73586586 | None:intergenic | 30.0% | |
| TGTAAATGACTTAGATGATG+AGG | + | chr8.1:73586134-73586153 | MS.gene59617:intron | 30.0% | |
| TTAAGACCTTCTTAAGCTTT+CGG | - | chr8.1:73587611-73587630 | None:intergenic | 30.0% | |
| TTGAAAGTGATTGTTTACTG+GGG | + | chr8.1:73585440-73585459 | MS.gene59617:intron | 30.0% | |
| TTGAAGAAAAATTGGTTGGA+AGG | + | chr8.1:73585301-73585320 | MS.gene59617:intron | 30.0% | |
| ! | AAAAGAAGTATAGCACGTTT+AGG | - | chr8.1:73586598-73586617 | None:intergenic | 30.0% |
| ! | AGTATATTTGGATCTAAAGC+GGG | + | chr8.1:73587827-73587846 | MS.gene59617:CDS | 30.0% |
| ! | CAAGCATTTTTCTGTAACTT+TGG | - | chr8.1:73585466-73585485 | None:intergenic | 30.0% |
| ! | GTTTATTTGTTAGGGTTTCT+AGG | + | chr8.1:73585217-73585236 | MS.gene59617:intron | 30.0% |
| ! | TCTTGAAAGACTTTTTGTCA+TGG | - | chr8.1:73587252-73587271 | None:intergenic | 30.0% |
| !! | GAGTTTGTTAGCAAATACAA+AGG | + | chr8.1:73588056-73588075 | MS.gene59617:CDS | 30.0% |
| !! | TGTGATATTTTTGTGTATGG+TGG | + | chr8.1:73585517-73585536 | MS.gene59617:intron | 30.0% |
| !! | TTCTTTCTATTGACTTGTCA+GGG | + | chr8.1:73587032-73587051 | MS.gene59617:intron | 30.0% |
| !!! | GTGTGATTTTTGGGTTTTTT+TGG | + | chr8.1:73585394-73585413 | MS.gene59617:intron | 30.0% |
| !!! | TTTTGCAGCTTTTTTCGAAT+GGG | + | chr8.1:73586457-73586476 | MS.gene59617:intron | 30.0% |
| AAAGGCAATTACACATTCAC+AGG | + | chr8.1:73588074-73588093 | MS.gene59617:CDS | 35.0% | |
| AAATGTTAACCTAGGTGATG+AGG | + | chr8.1:73586110-73586129 | MS.gene59617:intron | 35.0% | |
| ACGTTTAGGTGACTATTTGA+GGG | - | chr8.1:73586584-73586603 | None:intergenic | 35.0% | |
| AGATAATATTGCCTCTACTC+CGG | - | chr8.1:73587442-73587461 | None:intergenic | 35.0% | |
| ATCATGTTCAAAGTCACTAC+AGG | - | chr8.1:73587634-73587653 | None:intergenic | 35.0% | |
| ATTATCTAGTGATGATCTCC+AGG | + | chr8.1:73587455-73587474 | MS.gene59617:CDS | 35.0% | |
| ATTGTACCTCTATTGCTGAT+TGG | + | chr8.1:73584925-73584944 | MS.gene59617:CDS | 35.0% | |
| ATTGTCCTTTGCTTGTAAGT+GGG | + | chr8.1:73586022-73586041 | MS.gene59617:intron | 35.0% | |
| CAAAGTTCTTTCCATTGCTT+TGG | + | chr8.1:73587951-73587970 | MS.gene59617:CDS | 35.0% | |
| CATGCATGAGATATTGTAGT+CGG | + | chr8.1:73586743-73586762 | MS.gene59617:CDS | 35.0% | |
| CATTCGAAAAAAGCTGCAAA+AGG | - | chr8.1:73586458-73586477 | None:intergenic | 35.0% | |
| CTTACTATGCAGCAATGAAA+TGG | - | chr8.1:73585864-73585883 | None:intergenic | 35.0% | |
| GCTTGGTTATATCCTTGTAT+CGG | - | chr8.1:73586891-73586910 | None:intergenic | 35.0% | |
| TAAAAGCCCGTTCTTCTATA+AGG | + | chr8.1:73586353-73586372 | MS.gene59617:CDS | 35.0% | |
| TATAAACAAAGGGGCAATAG+GGG | - | chr8.1:73585814-73585833 | None:intergenic | 35.0% | |
| TATTCTCAGGCATTTCACTT+GGG | + | chr8.1:73587885-73587904 | MS.gene59617:CDS | 35.0% | |
| TATTGTCCTTTGCTTGTAAG+TGG | + | chr8.1:73586021-73586040 | MS.gene59617:intron | 35.0% | |
| TGGCTTCATCTCAATATCAT+TGG | + | chr8.1:73587347-73587366 | MS.gene59617:intron | 35.0% | |
| TGGTCTACCTTATAGAAGAA+CGG | - | chr8.1:73586363-73586382 | None:intergenic | 35.0% | |
| TGTAAATGACTTAGGTGATG+AGG | + | chr8.1:73586158-73586177 | MS.gene59617:intron | 35.0% | |
| TTATGACTTTGTGCTGAAGT+GGG | + | chr8.1:73587497-73587516 | MS.gene59617:CDS | 35.0% | |
| TTATTCTCAGGCATTTCACT+TGG | + | chr8.1:73587884-73587903 | MS.gene59617:CDS | 35.0% | |
| TTTATGACTTTGTGCTGAAG+TGG | + | chr8.1:73587496-73587515 | MS.gene59617:CDS | 35.0% | |
| ! | ATTTCTCTGATAGGGTTTTG+AGG | + | chr8.1:73584856-73584875 | MS.gene59617:CDS | 35.0% |
| ! | GAACTCTTTCTTTTTGTGGA+CGG | + | chr8.1:73587163-73587182 | MS.gene59617:intron | 35.0% |
| ! | GAGGTACAATTTTCAGAATC+AGG | - | chr8.1:73584915-73584934 | None:intergenic | 35.0% |
| ! | GGTGGATAATGTTTGAGTTA+GGG | + | chr8.1:73585535-73585554 | MS.gene59617:intron | 35.0% |
| ! | GTTGGAACTCTTTCTTTTTG+TGG | + | chr8.1:73587159-73587178 | MS.gene59617:intron | 35.0% |
| ! | TGGTGGATAATGTTTGAGTT+AGG | + | chr8.1:73585534-73585553 | MS.gene59617:intron | 35.0% |
| ! | TTGTACCTCTATTGCTGATT+GGG | + | chr8.1:73584926-73584945 | MS.gene59617:CDS | 35.0% |
| ! | TTTTTCCCACTTACAAGCAA+AGG | - | chr8.1:73586030-73586049 | None:intergenic | 35.0% |
| !! | ACCAGAAGCATTAATTCTGA+GGG | - | chr8.1:73586511-73586530 | None:intergenic | 35.0% |
| !! | CAATTTTCAGAATCAGGTTG+AGG | - | chr8.1:73584909-73584928 | None:intergenic | 35.0% |
| !! | GAGAAAAGGAAGTACTGTAT+AGG | - | chr8.1:73587002-73587021 | None:intergenic | 35.0% |
| !! | GTTCTTTCTATTGACTTGTC+AGG | + | chr8.1:73587031-73587050 | MS.gene59617:intron | 35.0% |
| !! | TACCAGAAGCATTAATTCTG+AGG | - | chr8.1:73586512-73586531 | None:intergenic | 35.0% |
| !!! | CTTTTGCAGCTTTTTTCGAA+TGG | + | chr8.1:73586456-73586475 | MS.gene59617:intron | 35.0% |
| !!! | GGTTTTGAGGATTGAAATCA+TGG | + | chr8.1:73584869-73584888 | MS.gene59617:CDS | 35.0% |
| !!! | GTTTTAACTCTAACAACTGC+AGG | - | chr8.1:73586303-73586322 | None:intergenic | 35.0% |
| ACATATCAGTTCTCCGATCT+TGG | + | chr8.1:73586326-73586345 | MS.gene59617:CDS | 40.0% | |
| ACCCTCAGAATTAATGCTTC+TGG | + | chr8.1:73586507-73586526 | MS.gene59617:CDS | 40.0% | |
| AGATCGGAGAACTGATATGT+AGG | - | chr8.1:73586326-73586345 | None:intergenic | 40.0% | |
| AGGTAAAGCAATGCAGATTC+AGG | - | chr8.1:73586793-73586812 | None:intergenic | 40.0% | |
| AGTTCAACCACTAACTGATG+CGG | + | chr8.1:73586846-73586865 | MS.gene59617:CDS | 40.0% | |
| ATCAAAACATCCAGCAAACC+AGG | - | chr8.1:73586697-73586716 | None:intergenic | 40.0% | |
| ATGGTCTTCTGTTTGCAGTT+GGG | + | chr8.1:73585608-73585627 | MS.gene59617:intron | 40.0% | |
| CACGTTTAGGTGACTATTTG+AGG | - | chr8.1:73586585-73586604 | None:intergenic | 40.0% | |
| CCAAATATACTACACACTGC+TGG | - | chr8.1:73587818-73587837 | None:intergenic | 40.0% | |
| CCAGCAGTGTGTAGTATATT+TGG | + | chr8.1:73587815-73587834 | MS.gene59617:CDS | 40.0% | |
| CCATTCAAAATCTGCTCATC+CGG | - | chr8.1:73585640-73585659 | None:intergenic | 40.0% | |
| CCTTGAAAAATAGAGCCTCA+AGG | - | chr8.1:73587674-73587693 | None:intergenic | 40.0% | |
| CTACAAATATCGTCCTGTCA+AGG | + | chr8.1:73587770-73587789 | MS.gene59617:CDS | 40.0% | |
| CTTGACAGGACGATATTTGT+AGG | - | chr8.1:73587772-73587791 | None:intergenic | 40.0% | |
| GAAATGCCTGAGAATAAACC+CGG | - | chr8.1:73587881-73587900 | None:intergenic | 40.0% | |
| GAATTCCGATCTGTTTGATC+CGG | + | chr8.1:73584755-73584774 | MS.gene59617:CDS | 40.0% | |
| GATAATATTGCCTCTACTCC+GGG | - | chr8.1:73587441-73587460 | None:intergenic | 40.0% | |
| GATCGGAGAACTGATATGTA+GGG | - | chr8.1:73586325-73586344 | None:intergenic | 40.0% | |
| GATGAGGCTGTAAATGACTT+AGG | + | chr8.1:73586126-73586145 | MS.gene59617:intron | 40.0% | |
| GGTCTACCTTATAGAAGAAC+GGG | - | chr8.1:73586362-73586381 | None:intergenic | 40.0% | |
| GTATTGCTGGGTCTAATTGT+TGG | + | chr8.1:73587141-73587160 | MS.gene59617:intron | 40.0% | |
| GTATTTGCGTGTGTATTGCT+GGG | + | chr8.1:73587129-73587148 | MS.gene59617:intron | 40.0% | |
| TATGGTCTTCTGTTTGCAGT+TGG | + | chr8.1:73585607-73585626 | MS.gene59617:intron | 40.0% | |
| TCAAATTCAACCACCTTGAC+AGG | - | chr8.1:73587786-73587805 | None:intergenic | 40.0% | |
| TCAGCCATTAAGACACTAGA+TGG | - | chr8.1:73586823-73586842 | None:intergenic | 40.0% | |
| TCTGTCAGCACATTGTAACA+TGG | + | chr8.1:73587923-73587942 | MS.gene59617:CDS | 40.0% | |
| TGAATCTGCATTGCTTTACC+TGG | + | chr8.1:73586792-73586811 | MS.gene59617:CDS | 40.0% | |
| TGTATTTGCGTGTGTATTGC+TGG | + | chr8.1:73587128-73587147 | MS.gene59617:intron | 40.0% | |
| TTCTTGGGAATGCAGGAAAA+GGG | + | chr8.1:73587978-73587997 | MS.gene59617:CDS | 40.0% | |
| TTGCTAACAAACTCCTCTGT+TGG | - | chr8.1:73588050-73588069 | None:intergenic | 40.0% | |
| ! | ATATTTGGATCTAAAGCGGG+AGG | + | chr8.1:73587830-73587849 | MS.gene59617:CDS | 40.0% |
| ! | CACTGTGGACTATGAATTTG+CGG | + | chr8.1:73588013-73588032 | MS.gene59617:CDS | 40.0% |
| ! | CGGATGAGCAGATTTTGAAT+GGG | + | chr8.1:73585638-73585657 | MS.gene59617:CDS | 40.0% |
| ! | GAAACTTGTTTGCGATTCCA+TGG | + | chr8.1:73588117-73588136 | MS.gene59617:CDS | 40.0% |
| ! | TGGAGAGTGGTGTGATTTTT+GGG | + | chr8.1:73585385-73585404 | MS.gene59617:intron | 40.0% |
| ! | TGTGTGTGTGTGTGTTTTGT+TGG | + | chr8.1:73587071-73587090 | MS.gene59617:intron | 40.0% |
| ! | TTGTGTGGCTTCTGAAAATC+AGG | + | chr8.1:73585681-73585700 | MS.gene59617:CDS | 40.0% |
| !! | CCTTGAGGCTCTATTTTTCA+AGG | + | chr8.1:73587671-73587690 | MS.gene59617:CDS | 40.0% |
| !! | GTGTGTGTGTGTGTTTTGTT+GGG | + | chr8.1:73587072-73587091 | MS.gene59617:intron | 40.0% |
| !! | TGTGTGTGTGTGTTTTGTTG+GGG | + | chr8.1:73587073-73587092 | MS.gene59617:intron | 40.0% |
| !!! | AGCTTTTTTCGAATGGGATG+AGG | + | chr8.1:73586463-73586482 | MS.gene59617:intron | 40.0% |
| !!! | GCTTTTTTCGAATGGGATGA+GGG | + | chr8.1:73586464-73586483 | MS.gene59617:intron | 40.0% |
| !!! | TGGTTTGCTGGATGTTTTGA+TGG | + | chr8.1:73586696-73586715 | MS.gene59617:CDS | 40.0% |
| ACCTGACATGGATGATTGTG+TGG | + | chr8.1:73585666-73585685 | MS.gene59617:CDS | 45.0% | |
| AGGTTGAGGATCAACTGGAT+CGG | - | chr8.1:73584895-73584914 | None:intergenic | 45.0% | |
| AGTACGGCAATCTGGAAGAT+AGG | + | chr8.1:73587529-73587548 | MS.gene59617:CDS | 45.0% | |
| ATGGTTGAAGAATCCCCTTC+TGG | + | chr8.1:73585721-73585740 | MS.gene59617:CDS | 45.0% | |
| CAAATATCGTCCTGTCAAGG+TGG | + | chr8.1:73587773-73587792 | MS.gene59617:CDS | 45.0% | |
| CACAATCATCCATGTCAGGT+TGG | - | chr8.1:73585666-73585685 | None:intergenic | 45.0% | |
| CATGTATATGACCAGGTTCC+AGG | + | chr8.1:73587392-73587411 | MS.gene59617:intron | 45.0% | |
| CATTTACAGCCTCATCACCT+AGG | - | chr8.1:73586122-73586141 | None:intergenic | 45.0% | |
| CATTTCACTTGGGTGGACAA+GGG | + | chr8.1:73587895-73587914 | MS.gene59617:CDS | 45.0% | |
| CGATCTGTTTGATCCGGTTA+CGG | + | chr8.1:73584761-73584780 | MS.gene59617:CDS | 45.0% | |
| CGTAACCGGATCAAACAGAT+CGG | - | chr8.1:73584763-73584782 | None:intergenic | 45.0% | |
| GACAATGATGAACCCAACCT+GGG | + | chr8.1:73586261-73586280 | MS.gene59617:CDS | 45.0% | |
| GATTCCATGGACTTCGTTCA+TGG | + | chr8.1:73588130-73588149 | MS.gene59617:CDS | 45.0% | |
| GCTGCCATCTAGTGTCTTAA+TGG | + | chr8.1:73586816-73586835 | MS.gene59617:CDS | 45.0% | |
| GGAGGAAGAAGTTGTTGCAA+TGG | + | chr8.1:73585702-73585721 | MS.gene59617:CDS | 45.0% | |
| GGCAATTACACATTCACAGG+TGG | + | chr8.1:73588077-73588096 | MS.gene59617:CDS | 45.0% | |
| GTATCTTGCTAGCCGATACA+AGG | + | chr8.1:73586876-73586895 | MS.gene59617:CDS | 45.0% | |
| GTTCTTGGGAATGCAGGAAA+AGG | + | chr8.1:73587977-73587996 | MS.gene59617:CDS | 45.0% | |
| TAATGGCGTTCTGCACCTAA+GGG | + | chr8.1:73588175-73588194 | MS.gene59617:CDS | 45.0% | |
| TACAGAAGAAGCTGCTCTCA+TGG | + | chr8.1:73586624-73586643 | MS.gene59617:intron | 45.0% | |
| TATCTTCCAGATTGCCGTAC+TGG | - | chr8.1:73587530-73587549 | None:intergenic | 45.0% | |
| TGACAATGATGAACCCAACC+TGG | + | chr8.1:73586260-73586279 | MS.gene59617:CDS | 45.0% | |
| TGGACTATGAATTTGCGGCA+AGG | + | chr8.1:73588018-73588037 | MS.gene59617:CDS | 45.0% | |
| TGGTCTTCTGTTTGCAGTTG+GGG | + | chr8.1:73585609-73585628 | MS.gene59617:intron | 45.0% | |
| TTAATGGCGTTCTGCACCTA+AGG | + | chr8.1:73588174-73588193 | MS.gene59617:CDS | 45.0% | |
| TTACACATTCACAGGTGGCA+AGG | + | chr8.1:73588082-73588101 | MS.gene59617:CDS | 45.0% | |
| TTCATCCAAGCTTGTCCTTG+AGG | + | chr8.1:73587656-73587675 | MS.gene59617:CDS | 45.0% | |
| TTCGAATGGGATGAGGGAAT+CGG | + | chr8.1:73586470-73586489 | MS.gene59617:CDS | 45.0% | |
| TTGAGCATTAAGACAGCACC+TGG | + | chr8.1:73586676-73586695 | MS.gene59617:CDS | 45.0% | |
| ! | CATTGCTTTGGGCTGTTCTT+GGG | + | chr8.1:73587963-73587982 | MS.gene59617:CDS | 45.0% |
| ! | CCGGATGAGCAGATTTTGAA+TGG | + | chr8.1:73585637-73585656 | MS.gene59617:CDS | 45.0% |
| ! | CTGGAGAGTGGTGTGATTTT+TGG | + | chr8.1:73585384-73585403 | MS.gene59617:intron | 45.0% |
| ! | TGTGGCTTCTGAAAATCAGG+AGG | + | chr8.1:73585684-73585703 | MS.gene59617:CDS | 45.0% |
| ! | TGTTCCAATTTGTTCCCGTC+TGG | + | chr8.1:73587855-73587874 | MS.gene59617:CDS | 45.0% |
| !! | GAATCAGGTTGAGGATCAAC+TGG | - | chr8.1:73584900-73584919 | None:intergenic | 45.0% |
| !! | GTGTGTGTGTGTTTTGTTGG+GGG | + | chr8.1:73587074-73587093 | MS.gene59617:intron | 45.0% |
| !! | TACGGTGATGGAATCCGAAT+GGG | + | chr8.1:73584779-73584798 | MS.gene59617:CDS | 45.0% |
| !! | TGTGTGTGTGTTTTGTTGGG+GGG | + | chr8.1:73587075-73587094 | MS.gene59617:intron | 45.0% |
| !! | TTACGGTGATGGAATCCGAA+TGG | + | chr8.1:73584778-73584797 | MS.gene59617:CDS | 45.0% |
| !!! | GGCTCTATTTTTCAAGGCAG+AGG | + | chr8.1:73587677-73587696 | MS.gene59617:CDS | 45.0% |
| !!! | AAAATGATTTTTTTTAATTA+TGG | + | chr8.1:73585194-73585213 | MS.gene59617:intron | 5.0% |
| !!! | AAATGATTTTTTTTAATTAT+GGG | + | chr8.1:73585195-73585214 | MS.gene59617:intron | 5.0% |
| !!! | AATTGTTTATTTATTTATTT+TGG | + | chr8.1:73585153-73585172 | MS.gene59617:intron | 5.0% |
| !!! | ATTGTTTATTTATTTATTTT+GGG | + | chr8.1:73585154-73585173 | MS.gene59617:intron | 5.0% |
| AGAGTAATCCATGCCCAGGT+TGG | - | chr8.1:73586277-73586296 | None:intergenic | 50.0% | |
| AGCAAATCCGAAATCGGCGT+CGG | - | chr8.1:73584823-73584842 | None:intergenic | 50.0% | |
| AGCTTTCGGCAGGTCATATG+AGG | - | chr8.1:73587597-73587616 | None:intergenic | 50.0% | |
| ATATTGCCTCTACTCCGGGT+AGG | - | chr8.1:73587437-73587456 | None:intergenic | 50.0% | |
| ATGGACTTCGTTCATGGCTG+AGG | + | chr8.1:73588136-73588155 | MS.gene59617:CDS | 50.0% | |
| CAGCATCTTCTGATGCAACC+TGG | - | chr8.1:73587476-73587495 | None:intergenic | 50.0% | |
| CCAAGAACAGCCCAAAGCAA+TGG | - | chr8.1:73587965-73587984 | None:intergenic | 50.0% | |
| GAAGATAGGCGAGAAGTCCT+AGG | + | chr8.1:73587543-73587562 | MS.gene59617:CDS | 50.0% | |
| GAATGGGAACCAACCTGACA+TGG | + | chr8.1:73585654-73585673 | MS.gene59617:CDS | 50.0% | |
| GACCTGCCGAAAGCTTAAGA+AGG | + | chr8.1:73587602-73587621 | MS.gene59617:CDS | 50.0% | |
| GACCTTCTTAAGCTTTCGGC+AGG | - | chr8.1:73587607-73587626 | None:intergenic | 50.0% | |
| GAGTAATCCATGCCCAGGTT+GGG | - | chr8.1:73586276-73586295 | None:intergenic | 50.0% | |
| GCAAGTTCATAACCTCGTCC+TGG | - | chr8.1:73587413-73587432 | None:intergenic | 50.0% | |
| GCATTTCACTTGGGTGGACA+AGG | + | chr8.1:73587894-73587913 | MS.gene59617:CDS | 50.0% | |
| GCCACACAATCATCCATGTC+AGG | - | chr8.1:73585670-73585689 | None:intergenic | 50.0% | |
| GCTTTCGGCAGGTCATATGA+GGG | - | chr8.1:73587596-73587615 | None:intergenic | 50.0% | |
| GTTATGAACTTGCCCCTACC+CGG | + | chr8.1:73587420-73587439 | MS.gene59617:CDS | 50.0% | |
| GTTCAGAGTAATCCATGCCC+AGG | - | chr8.1:73586281-73586300 | None:intergenic | 50.0% | |
| GTTTGATCCGGTTACGGTGA+TGG | + | chr8.1:73584767-73584786 | MS.gene59617:CDS | 50.0% | |
| TAGACACCAGTACGGCAATC+TGG | + | chr8.1:73587521-73587540 | MS.gene59617:CDS | 50.0% | |
| TAGAGCCTCAAGGACAAGCT+TGG | - | chr8.1:73587664-73587683 | None:intergenic | 50.0% | |
| TATACTACACACTGCTGGCG+TGG | - | chr8.1:73587813-73587832 | None:intergenic | 50.0% | |
| TATTGCCTCTACTCCGGGTA+GGG | - | chr8.1:73587436-73587455 | None:intergenic | 50.0% | |
| TCAGCCATGAACGAAGTCCA+TGG | - | chr8.1:73588137-73588156 | None:intergenic | 50.0% | |
| TCGGATTCCATCACCGTAAC+CGG | - | chr8.1:73584777-73584796 | None:intergenic | 50.0% | |
| TCTCAGGCATTTCACTTGGG+TGG | + | chr8.1:73587888-73587907 | MS.gene59617:CDS | 50.0% | |
| TGAGAATAAACCCGGCCAGA+CGG | - | chr8.1:73587873-73587892 | None:intergenic | 50.0% | |
| TGCTTTGCCGCATCAGTTAG+TGG | - | chr8.1:73586856-73586875 | None:intergenic | 50.0% | |
| ! | ATGGAATCCGAATGGGCTCA+CGG | + | chr8.1:73584786-73584805 | MS.gene59617:CDS | 50.0% |
| ! | CCATTGCTTTGGGCTGTTCT+TGG | + | chr8.1:73587962-73587981 | MS.gene59617:CDS | 50.0% |
| ! | GGGCTTTTAGCAGCCAAGAT+CGG | - | chr8.1:73586342-73586361 | None:intergenic | 50.0% |
| ! | TAAGACAGCACCTGGTTTGC+TGG | + | chr8.1:73586684-73586703 | MS.gene59617:CDS | 50.0% |
| ! | TCACTGTCTGATGGTGAGCT+CGG | - | chr8.1:73588201-73588220 | None:intergenic | 50.0% |
| !! | AAGTGGGCTAGACACCAGTA+CGG | + | chr8.1:73587513-73587532 | MS.gene59617:CDS | 50.0% |
| !! | GTGTGTGTGTTTTGTTGGGG+GGG | + | chr8.1:73587076-73587095 | MS.gene59617:intron | 50.0% |
| !! | TGTGTGTGTTTTGTTGGGGG+GGG | + | chr8.1:73587077-73587096 | MS.gene59617:intron | 50.0% |
| AGAACCACCGTGAGCCCATT+CGG | - | chr8.1:73584796-73584815 | None:intergenic | 55.0% | |
| AGACACTAGATGGCAGCTCC+AGG | - | chr8.1:73586813-73586832 | None:intergenic | 55.0% | |
| AGGCCCTCTCCAAGAAACGA+CGG | - | chr8.1:73587752-73587771 | None:intergenic | 55.0% | |
| ATTGCCTCTACTCCGGGTAG+GGG | - | chr8.1:73587435-73587454 | None:intergenic | 55.0% | |
| CAGAGGTTCCACATCGCCAA+CGG | + | chr8.1:73587694-73587713 | MS.gene59617:CDS | 55.0% | |
| CATAACCTCGTCCTGGAACC+TGG | - | chr8.1:73587406-73587425 | None:intergenic | 55.0% | |
| CCTCGCCCAATCAGCAATAG+AGG | - | chr8.1:73584934-73584953 | None:intergenic | 55.0% | |
| GAGAATAAACCCGGCCAGAC+GGG | - | chr8.1:73587872-73587891 | None:intergenic | 55.0% | |
| GAGCCGTCGTTTCTTGGAGA+GGG | + | chr8.1:73587746-73587765 | MS.gene59617:CDS | 55.0% | |
| GGCAAGGTCAAGACCAACAG+AGG | + | chr8.1:73588034-73588053 | MS.gene59617:CDS | 55.0% | |
| GGCAGGTCATATGAGGGAAG+CGG | - | chr8.1:73587590-73587609 | None:intergenic | 55.0% | |
| GGGATCAGTGAGCTTCACTG+TGG | + | chr8.1:73587998-73588017 | MS.gene59617:CDS | 55.0% | |
| GTCTGGCCGGGTTTATTCTC+AGG | + | chr8.1:73587872-73587891 | MS.gene59617:CDS | 55.0% | |
| GTTTGCAGTTGGGGATCTGC+CGG | + | chr8.1:73585618-73585637 | MS.gene59617:intron | 55.0% | |
| TATGACCAGGTTCCAGGACG+AGG | + | chr8.1:73587398-73587417 | MS.gene59617:intron | 55.0% | |
| TGATGAACCCAACCTGGGCA+TGG | + | chr8.1:73586266-73586285 | MS.gene59617:CDS | 55.0% | |
| TGGGCTGTTCTTGGGAATGC+AGG | + | chr8.1:73587971-73587990 | MS.gene59617:CDS | 55.0% | |
| TTCACAGGTGGCAAGGCTGT+TGG | + | chr8.1:73588089-73588108 | MS.gene59617:CDS | 55.0% | |
| TTGCTCGAGCCGTCGTTTCT+TGG | + | chr8.1:73587740-73587759 | MS.gene59617:CDS | 55.0% | |
| ! | CAATTTGTTCCCGTCTGGCC+GGG | + | chr8.1:73587860-73587879 | MS.gene59617:CDS | 55.0% |
| ! | CCAATTTGTTCCCGTCTGGC+CGG | + | chr8.1:73587859-73587878 | MS.gene59617:CDS | 55.0% |
| ! | CCTCTATTGCTGATTGGGCG+AGG | + | chr8.1:73584931-73584950 | MS.gene59617:CDS | 55.0% |
| ! | TTGCTGATTGGGCGAGGCAT+CGG | + | chr8.1:73584937-73584956 | MS.gene59617:CDS | 55.0% |
| !! | GTGTGTGTTTTGTTGGGGGG+GGG | + | chr8.1:73587078-73587097 | MS.gene59617:intron | 55.0% |
| !! | TCTAGCTCCGACGCCGATTT+CGG | + | chr8.1:73584813-73584832 | MS.gene59617:CDS | 55.0% |
| !! | TGTGTGTTTTGTTGGGGGGG+GGG | + | chr8.1:73587079-73587098 | MS.gene59617:intron | 55.0% |
| AAACGACGGCTCGAGCAAGC+AGG | - | chr8.1:73587738-73587757 | None:intergenic | 60.0% | |
| CCGGCCAGACGGGAACAAAT+TGG | - | chr8.1:73587862-73587881 | None:intergenic | 60.0% | |
| CGAGCCGTCGTTTCTTGGAG+AGG | + | chr8.1:73587745-73587764 | MS.gene59617:CDS | 60.0% | |
| CTTCAGCTGCCAGTGACCGT+TGG | - | chr8.1:73587713-73587732 | None:intergenic | 60.0% | |
| TCCACATCGCCAACGGTCAC+TGG | + | chr8.1:73587701-73587720 | MS.gene59617:CDS | 60.0% | |
| ! | GAATCCGAATGGGCTCACGG+TGG | + | chr8.1:73584789-73584808 | MS.gene59617:CDS | 60.0% |
| ! | TGATGGTGAGCTCGGCCCTT+AGG | - | chr8.1:73588193-73588212 | None:intergenic | 60.0% |
| !! | ATTGGGCGAGGCATCGGAAG+AGG | + | chr8.1:73584943-73584962 | MS.gene59617:CDS | 60.0% |
| !! | GTGTGTTTTGTTGGGGGGGG+GGG | + | chr8.1:73587080-73587099 | MS.gene59617:intron | 60.0% |
| !! | TGTGTTTTGTTGGGGGGGGG+GGG | + | chr8.1:73587081-73587100 | MS.gene59617:intron | 60.0% |
| ATCGTGCAAGCCGCGAGCCT+AGG | - | chr8.1:73587563-73587582 | None:intergenic | 65.0% | |
| CTTGCCCCTACCCGGAGTAG+AGG | + | chr8.1:73587428-73587447 | MS.gene59617:CDS | 65.0% | |
| GCCAGTGACCGTTGGCGATG+TGG | - | chr8.1:73587705-73587724 | None:intergenic | 65.0% | |
| GGCGAGAAGTCCTAGGCTCG+CGG | + | chr8.1:73587550-73587569 | MS.gene59617:CDS | 65.0% | |
| !! | GTGTTTTGTTGGGGGGGGGG+GGG | + | chr8.1:73587082-73587101 | MS.gene59617:intron | 65.0% |
| !! | TGTTTTGTTGGGGGGGGGGG+GGG | + | chr8.1:73587083-73587102 | MS.gene59617:intron | 65.0% |
| ! | TTTTGTTGGGGGGGGGGGGG+GGG | + | chr8.1:73587085-73587104 | MS.gene59617:intron | 70.0% |
| !! | GTTTTGTTGGGGGGGGGGGG+GGG | + | chr8.1:73587084-73587103 | MS.gene59617:intron | 70.0% |
| TTTGTTGGGGGGGGGGGGGG+GGG | + | chr8.1:73587086-73587105 | MS.gene59617:intron | 75.0% | |
| ! | TTGTTGGGGGGGGGGGGGGG+GGG | + | chr8.1:73587087-73587106 | MS.gene59617:intron | 80.0% |
| ! | TGTTGGGGGGGGGGGGGGGG+GGG | + | chr8.1:73587088-73587107 | MS.gene59617:intron | 85.0% |
| ! | GTTGGGGGGGGGGGGGGGGG+GGG | + | chr8.1:73587089-73587108 | MS.gene59617:intron | 90.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr8.1:73587090-73587109 | MS.gene59617:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 73584744 | 73588220 | 73584744 | ID=MS.gene59617 |
| chr8.1 | mRNA | 73584744 | 73588220 | 73584744 | ID=MS.gene59617.t1;Parent=MS.gene59617 |
| chr8.1 | exon | 73584744 | 73584993 | 73584744 | ID=MS.gene59617.t1.exon1;Parent=MS.gene59617.t1 |
| chr8.1 | CDS | 73584744 | 73584993 | 73584744 | ID=cds.MS.gene59617.t1;Parent=MS.gene59617.t1 |
| chr8.1 | exon | 73585626 | 73585742 | 73585626 | ID=MS.gene59617.t1.exon2;Parent=MS.gene59617.t1 |
| chr8.1 | CDS | 73585626 | 73585742 | 73585626 | ID=cds.MS.gene59617.t1;Parent=MS.gene59617.t1 |
| chr8.1 | exon | 73586244 | 73586374 | 73586244 | ID=MS.gene59617.t1.exon3;Parent=MS.gene59617.t1 |
| chr8.1 | CDS | 73586244 | 73586374 | 73586244 | ID=cds.MS.gene59617.t1;Parent=MS.gene59617.t1 |
| chr8.1 | exon | 73586465 | 73586528 | 73586465 | ID=MS.gene59617.t1.exon4;Parent=MS.gene59617.t1 |
| chr8.1 | CDS | 73586465 | 73586528 | 73586465 | ID=cds.MS.gene59617.t1;Parent=MS.gene59617.t1 |
| chr8.1 | exon | 73586629 | 73586908 | 73586629 | ID=MS.gene59617.t1.exon5;Parent=MS.gene59617.t1 |
| chr8.1 | CDS | 73586629 | 73586908 | 73586629 | ID=cds.MS.gene59617.t1;Parent=MS.gene59617.t1 |
| chr8.1 | exon | 73587407 | 73588220 | 73587407 | ID=MS.gene59617.t1.exon6;Parent=MS.gene59617.t1 |
| chr8.1 | CDS | 73587407 | 73588220 | 73587407 | ID=cds.MS.gene59617.t1;Parent=MS.gene59617.t1 |
| Gene Sequence |
| Protein sequence |
