Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79892.t1 | XP_024634043.1 | 89.7 | 311 | 29 | 1 | 1 | 308 | 1 | 311 | 5.70E-152 | 547 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79892.t1 | Q84LH3 | 53.1 | 224 | 98 | 2 | 75 | 292 | 62 | 284 | 4.7e-62 | 239.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79892.t1 | A0A396IWX4 | 89.7 | 311 | 29 | 1 | 1 | 308 | 1 | 311 | 4.1e-152 | 547.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061061 | MS.gene79892 | 0.80145 | 8.95E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79892.t1 | AT4G13870 | 47.163 | 282 | 128 | 6 | 26 | 292 | 9 | 284 | 4.03e-80 | 245 |
| MS.gene79892.t1 | AT4G13870 | 47.163 | 282 | 125 | 7 | 26 | 292 | 9 | 281 | 1.07e-77 | 238 |
| MS.gene79892.t1 | AT4G13885 | 42.342 | 111 | 27 | 1 | 182 | 292 | 186 | 259 | 2.45e-19 | 86.3 |
| MS.gene79892.t1 | AT1G56310 | 32.727 | 165 | 91 | 6 | 137 | 290 | 381 | 536 | 1.60e-12 | 68.2 |
| MS.gene79892.t1 | AT1G56310 | 32.727 | 165 | 91 | 6 | 137 | 290 | 381 | 536 | 1.60e-12 | 68.2 |
Find 78 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCTTGGTTTCTCTATC+AGG | 0.185259 | 3.1:+65450624 | MS.gene79892:CDS |
| GTAGTGATGGCGGTGGGTTT+GGG | 0.208962 | 3.1:-65446715 | None:intergenic |
| GGTAGTGATGGCGGTGGGTT+TGG | 0.223276 | 3.1:-65446716 | None:intergenic |
| TCGGCAACTTCCTGGGCATC+TGG | 0.234563 | 3.1:-65451341 | None:intergenic |
| GATTATTTCATATCCATTAA+AGG | 0.237423 | 3.1:+65448974 | MS.gene79892:CDS |
| AGTTGCTCCTTTGACAAATA+AGG | 0.254115 | 3.1:-65450577 | None:intergenic |
| AAGGTCTTCCACACCTTTAA+TGG | 0.256939 | 3.1:-65448987 | None:intergenic |
| GTTCTTCATCTAATTCATTC+TGG | 0.263565 | 3.1:+65448738 | MS.gene79892:CDS |
| GATTGGCGGTGATGCTTCTA+AGG | 0.264433 | 3.1:+65448943 | MS.gene79892:CDS |
| GCAAAATAAGAATGGGGAAT+TGG | 0.279134 | 3.1:+65450548 | MS.gene79892:CDS |
| TTCCCACAAAACTTCATTAC+AGG | 0.290923 | 3.1:-65447526 | None:intergenic |
| CAGGTAACCTCATCTTTAAA+TGG | 0.311083 | 3.1:-65447507 | None:intergenic |
| CAAAATAAGAATGGGGAATT+GGG | 0.341744 | 3.1:+65450549 | MS.gene79892:CDS |
| GACGGCGGCTGCTGCGGCGA+GGG | 0.351741 | 3.1:-65446765 | None:intergenic |
| TCAAGATCTTCCTGGGATAA+AGG | 0.355915 | 3.1:-65446661 | None:intergenic |
| ATCGTTCAGGCGAAGGAAAA+AGG | 0.359248 | 3.1:+65446587 | MS.gene79892:CDS |
| CTCTCTTTCTCACCTTCTCC+AGG | 0.359477 | 3.1:+65446829 | MS.gene79892:CDS |
| GATGCAAGACCCCACTTATT+CGG | 0.360319 | 3.1:-65449043 | None:intergenic |
| CAATGGCTTCAAGATCTTCC+TGG | 0.382197 | 3.1:-65446669 | None:intergenic |
| ACGGCGGCTGCTGCGGCGAG+GGG | 0.394600 | 3.1:-65446764 | None:intergenic |
| GTGAGAGATGAAGGGACGTT+TGG | 0.414413 | 3.1:-65446737 | None:intergenic |
| GATATTTACAAGGTTGGAGC+GGG | 0.430491 | 3.1:+65448920 | MS.gene79892:intron |
| TACAAGGTTGGAGCGGGGAT+TGG | 0.439136 | 3.1:+65448926 | MS.gene79892:intron |
| CAATCGGATTTGACATTGAG+TGG | 0.443247 | 3.1:+65447644 | MS.gene79892:CDS |
| GGTGAGAAAGAGAGAGAAGG+TGG | 0.448106 | 3.1:-65446820 | None:intergenic |
| CGACGGCGGCTGCTGCGGCG+AGG | 0.448728 | 3.1:-65446766 | None:intergenic |
| AAGGTTGGAGCGGGGATTGG+CGG | 0.452888 | 3.1:+65448929 | MS.gene79892:intron |
| CGGCGGCTGCTGCGGCGAGG+GGG | 0.457764 | 3.1:-65446763 | None:intergenic |
| AAGCCCAGCAAAATAAGAAT+GGG | 0.463753 | 3.1:+65450541 | MS.gene79892:CDS |
| TAGTGATGGCGGTGGGTTTG+GGG | 0.478100 | 3.1:-65446714 | None:intergenic |
| GTGGGAAAATTATGTACAGC+AGG | 0.478430 | 3.1:+65447542 | MS.gene79892:CDS |
| TTTGATTAGCGTGATAAGAA+AGG | 0.480610 | 3.1:-65449006 | None:intergenic |
| TAGGTGGAGGTCCGAATAAG+TGG | 0.494543 | 3.1:+65449032 | MS.gene79892:CDS |
| CGGCAACTTCCTGGGCATCT+GGG | 0.500387 | 3.1:-65451340 | None:intergenic |
| AGATTGAAGAGTGGCGTCAA+TGG | 0.502315 | 3.1:-65446686 | None:intergenic |
| GAAGCCCAGCAAAATAAGAA+TGG | 0.502994 | 3.1:+65450540 | MS.gene79892:CDS |
| CACTCAATGTCAAATCCGAT+TGG | 0.505854 | 3.1:-65447643 | None:intergenic |
| TTGATGGATCGTTCAGGCGA+AGG | 0.513572 | 3.1:+65446580 | None:intergenic |
| GTAAGCGACGGCGGCTGCTG+CGG | 0.524183 | 3.1:-65446771 | None:intergenic |
| GGAGACTCCTTATTTGTCAA+AGG | 0.525820 | 3.1:+65450570 | MS.gene79892:CDS |
| AGTAAAAGCTGTAGATTTCG+AGG | 0.526432 | 3.1:-65448765 | None:intergenic |
| TAAAGATCTCCCAGATGCCC+AGG | 0.529380 | 3.1:+65451331 | MS.gene79892:CDS |
| GTGAGAAAGAGAGAGAAGGT+GGG | 0.530800 | 3.1:-65446819 | None:intergenic |
| CGTTTGGTAGTGATGGCGGT+GGG | 0.536538 | 3.1:-65446721 | None:intergenic |
| CTCGCATTCGCACACGAATG+AGG | 0.537585 | 3.1:-65446638 | None:intergenic |
| GGGGAGAGAAGATTGAAGAG+TGG | 0.538363 | 3.1:-65446695 | None:intergenic |
| GAGGAAGTGGGACCTGGAGA+AGG | 0.539535 | 3.1:-65446841 | None:intergenic |
| AATGGCTTCAAGATCTTCCT+GGG | 0.547393 | 3.1:-65446668 | None:intergenic |
| TGCAAGGCCATTTAAAGATG+AGG | 0.550092 | 3.1:+65447500 | MS.gene79892:intron |
| TTTCATATCCATTAAAGGTG+TGG | 0.552455 | 3.1:+65448979 | MS.gene79892:CDS |
| ACGTTTGGTAGTGATGGCGG+TGG | 0.565650 | 3.1:-65446722 | None:intergenic |
| GAGATGATGCAAATTCCAAT+CGG | 0.569168 | 3.1:+65447628 | MS.gene79892:CDS |
| CAGCAGGACATTTAATGATG+TGG | 0.569177 | 3.1:+65447558 | MS.gene79892:CDS |
| ACTTCTACAGGTGTTCCACC+CGG | 0.569270 | 3.1:+65448669 | MS.gene79892:intron |
| GACAAAAGTAGTGAAGTTGA+TGG | 0.571140 | 3.1:+65451362 | MS.gene79892:CDS |
| TGGAGACCCACCTTCAAAAG+AGG | 0.572553 | 3.1:+65447664 | MS.gene79892:CDS |
| CGAATGCGAGCCTTTATCCC+AGG | 0.575805 | 3.1:+65446651 | MS.gene79892:CDS |
| CCAAGAAGCAAAAGCATCTG+TGG | 0.579851 | 3.1:-65450611 | None:intergenic |
| TATCACGCTAATCAAAAGCT+AGG | 0.580739 | 3.1:+65449013 | MS.gene79892:CDS |
| AGGAGGAGCTTGGTTTCGAG+CGG | 0.580987 | 3.1:+65446611 | MS.gene79892:CDS |
| GAAGGGACGTTTGGTAGTGA+TGG | 0.582694 | 3.1:-65446728 | None:intergenic |
| GAAGGTGAGAAAGAGAGAGA+AGG | 0.591518 | 3.1:-65446823 | None:intergenic |
| GTAAAAGCTGTAGATTTCGA+GGG | 0.592056 | 3.1:-65448764 | None:intergenic |
| TGAAGAGCGATGAGCGATGT+GGG | 0.592673 | 3.1:-65446793 | None:intergenic |
| AGGTGGAGGTCCGAATAAGT+GGG | 0.596759 | 3.1:+65449033 | MS.gene79892:CDS |
| ATGAGATACGGTCATTGTTG+CGG | 0.601141 | 3.1:-65451389 | None:intergenic |
| GCTAATCAAAAGCTAGGTGG+AGG | 0.615154 | 3.1:+65449019 | MS.gene79892:CDS |
| CTTCTACAGGTGTTCCACCC+GGG | 0.615423 | 3.1:+65448670 | MS.gene79892:intron |
| TTGAAGAGCGATGAGCGATG+TGG | 0.628089 | 3.1:-65446794 | None:intergenic |
| TGAGCGATGTGGGTAAGCGA+CGG | 0.634153 | 3.1:-65446783 | None:intergenic |
| GGGACGTTTGGTAGTGATGG+CGG | 0.643409 | 3.1:-65446725 | None:intergenic |
| TGATATTTACAAGGTTGGAG+CGG | 0.649599 | 3.1:+65448919 | MS.gene79892:intron |
| CACGCTAATCAAAAGCTAGG+TGG | 0.649833 | 3.1:+65449016 | MS.gene79892:CDS |
| AATAGAAACCTTCAAAACTG+AGG | 0.653917 | 3.1:-65448796 | None:intergenic |
| ATATTTACAAGGTTGGAGCG+GGG | 0.669237 | 3.1:+65448921 | MS.gene79892:intron |
| AGCCCAGCAAAATAAGAATG+GGG | 0.678211 | 3.1:+65450542 | MS.gene79892:CDS |
| GCGATGTGGGTAAGCGACGG+CGG | 0.679689 | 3.1:-65446780 | None:intergenic |
| GGTGGAGGTCCGAATAAGTG+GGG | 0.701955 | 3.1:+65449034 | MS.gene79892:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATATTATTATGACA+GGG | + | chr3.1:65449401-65449420 | MS.gene79892:intron | 10.0% |
| !!! | TATTAAATTATTGTAGTTTT+AGG | - | chr3.1:65448572-65448591 | None:intergenic | 10.0% |
| !!! | TATTTTTATATTATTATGAC+AGG | + | chr3.1:65449400-65449419 | MS.gene79892:intron | 10.0% |
| !! | AGATAACAATTAAAAGATTT+AGG | + | chr3.1:65449940-65449959 | MS.gene79892:intron | 15.0% |
| !! | ATTGATTGAATTTACTATTT+AGG | - | chr3.1:65451201-65451220 | None:intergenic | 15.0% |
| !! | GATAACAATTAAAAGATTTA+GGG | + | chr3.1:65449941-65449960 | MS.gene79892:intron | 15.0% |
| !! | TATTAAATAAATCTCTGTTT+AGG | - | chr3.1:65447075-65447094 | None:intergenic | 15.0% |
| !!! | ATATAATTTTTAGACATCAT+CGG | + | chr3.1:65449809-65449828 | MS.gene79892:intron | 15.0% |
| !!! | TACTTTTTGTTTACTTATAT+TGG | + | chr3.1:65447224-65447243 | MS.gene79892:intron | 15.0% |
| !!! | TGAAAATTCTAAAACTTATT+TGG | + | chr3.1:65450010-65450029 | MS.gene79892:intron | 15.0% |
| !! | AAGTAAAGTAATCAATATAG+TGG | - | chr3.1:65446876-65446895 | None:intergenic | 20.0% |
| !! | AAGTTTATTAGAAAACCAAA+AGG | - | chr3.1:65447459-65447478 | None:intergenic | 20.0% |
| !! | AATTTCCAAAACTAAAAACA+CGG | + | chr3.1:65450136-65450155 | MS.gene79892:intron | 20.0% |
| !! | AGTAAAGTAATCAATATAGT+GGG | - | chr3.1:65446875-65446894 | None:intergenic | 20.0% |
| !! | ATAGAAAAATTATGAGATTC+AGG | - | chr3.1:65447361-65447380 | None:intergenic | 20.0% |
| !! | GATTATTTCATATCCATTAA+AGG | + | chr3.1:65448974-65448993 | MS.gene79892:CDS | 20.0% |
| !! | TATGATGTTTGATATTTACA+AGG | + | chr3.1:65448910-65448929 | MS.gene79892:intron | 20.0% |
| !! | TGAAAACAAAATTCAAATAC+TGG | - | chr3.1:65447144-65447163 | None:intergenic | 20.0% |
| !! | TTTAAAAAACAGAATCAAAC+AGG | - | chr3.1:65449967-65449986 | None:intergenic | 20.0% |
| !!! | AAAAAAGTAATTTGAAGTTG+TGG | - | chr3.1:65448605-65448624 | None:intergenic | 20.0% |
| !!! | AGAAAATTCGATGTTTTTAT+TGG | + | chr3.1:65447934-65447953 | MS.gene79892:intron | 20.0% |
| !!! | ATATTACTTGTTATAATTGC+AGG | - | chr3.1:65449602-65449621 | None:intergenic | 20.0% |
| !!! | ATGTGGTATATTTTCATTAA+TGG | + | chr3.1:65450161-65450180 | MS.gene79892:intron | 20.0% |
| !!! | ATTTCATCAATATTTCCTTT+TGG | + | chr3.1:65447441-65447460 | MS.gene79892:intron | 20.0% |
| !!! | CTCATAATTTTTCTATTTCA+TGG | + | chr3.1:65447365-65447384 | MS.gene79892:intron | 20.0% |
| !!! | TTTTAAATGTGTTGTATCTT+AGG | - | chr3.1:65451083-65451102 | None:intergenic | 20.0% |
| ! | AAAATAAATTCTTCCCCAAA+AGG | - | chr3.1:65449386-65449405 | None:intergenic | 25.0% |
| ! | AAATAAAAAACGGTGGAAAA+TGG | - | chr3.1:65450397-65450416 | None:intergenic | 25.0% |
| ! | AACTGGAAATCAACATAAAT+TGG | - | chr3.1:65446952-65446971 | None:intergenic | 25.0% |
| ! | AAGAAATAAGATTATCAAGC+AGG | + | chr3.1:65450232-65450251 | MS.gene79892:intron | 25.0% |
| ! | ACTGGAAATCAACATAAATT+GGG | - | chr3.1:65446951-65446970 | None:intergenic | 25.0% |
| ! | AGGCCAAAGAAAATAAAAAA+CGG | - | chr3.1:65450407-65450426 | None:intergenic | 25.0% |
| ! | ATGTTTGATATTTACAAGGT+TGG | + | chr3.1:65448914-65448933 | MS.gene79892:intron | 25.0% |
| ! | GGTTTCTATTTACTTTAAAC+TGG | + | chr3.1:65448809-65448828 | MS.gene79892:intron | 25.0% |
| ! | GTAAAGTAATCAATATAGTG+GGG | - | chr3.1:65446874-65446893 | None:intergenic | 25.0% |
| ! | GTGTAAATGAATTTAACACT+AGG | - | chr3.1:65447028-65447047 | None:intergenic | 25.0% |
| ! | GTTAAATTCATTTACACTGA+CGG | + | chr3.1:65447031-65447050 | MS.gene79892:intron | 25.0% |
| ! | TAAAAGTTAATCTAGTTGCA+GGG | + | chr3.1:65450757-65450776 | MS.gene79892:intron | 25.0% |
| ! | TAAACTATACATGTAATGTC+AGG | - | chr3.1:65449464-65449483 | None:intergenic | 25.0% |
| ! | TAAAGTAATCAATATAGTGG+GGG | - | chr3.1:65446873-65446892 | None:intergenic | 25.0% |
| ! | TACCAGATATAACATAAGAA+TGG | - | chr3.1:65449268-65449287 | None:intergenic | 25.0% |
| ! | TAGAAACTTAAGTATGAGAT+AGG | + | chr3.1:65450787-65450806 | MS.gene79892:intron | 25.0% |
| ! | TTTGGTATTTGTATCTGTTT+GGG | + | chr3.1:65447866-65447885 | MS.gene79892:intron | 25.0% |
| !! | AAACATCGAATTTTCTTTAC+TGG | - | chr3.1:65447930-65447949 | None:intergenic | 25.0% |
| !! | AGCAAAACATAAAACAGTTT+TGG | - | chr3.1:65450061-65450080 | None:intergenic | 25.0% |
| !! | GCAAAACATAAAACAGTTTT+GGG | - | chr3.1:65450060-65450079 | None:intergenic | 25.0% |
| !! | TATTTTCTCTTCCTATAAAC+TGG | - | chr3.1:65446969-65446988 | None:intergenic | 25.0% |
| !! | TATTTTGTAGAGAAAGAGAT+AGG | - | chr3.1:65447408-65447427 | None:intergenic | 25.0% |
| !! | TTGCCAATATTGTTACTTAA+AGG | - | chr3.1:65447771-65447790 | None:intergenic | 25.0% |
| !! | TTTTCTTCTAGTCAATTGTT+TGG | + | chr3.1:65448037-65448056 | MS.gene79892:intron | 25.0% |
| !!! | ACTAGCACATTTTTTTAAAG+CGG | - | chr3.1:65449536-65449555 | None:intergenic | 25.0% |
| !!! | ATGGCATTTTAGTAAATAAG+TGG | + | chr3.1:65450180-65450199 | MS.gene79892:intron | 25.0% |
| !!! | ATGTCTTTTTTATTGTTGCA+AGG | + | chr3.1:65447484-65447503 | MS.gene79892:intron | 25.0% |
| !!! | CTGTTTTGATAGAAGTTTTT+CGG | - | chr3.1:65449074-65449093 | None:intergenic | 25.0% |
| !!! | GTGTTTTTAGTTTTGGAAAT+TGG | - | chr3.1:65450137-65450156 | None:intergenic | 25.0% |
| !!! | TATGTTGATTTCCAGTTTAT+AGG | + | chr3.1:65446955-65446974 | MS.gene79892:intron | 25.0% |
| !!! | TCTTTTCTTCAATGCTTTTT+AGG | - | chr3.1:65447603-65447622 | None:intergenic | 25.0% |
| AAAAGTTAATCTAGTTGCAG+GGG | + | chr3.1:65450758-65450777 | MS.gene79892:intron | 30.0% | |
| AAAATTCTTCAAACACCTGA+TGG | + | chr3.1:65449159-65449178 | MS.gene79892:intron | 30.0% | |
| AAACTAAAAACACGGAAATG+TGG | + | chr3.1:65450144-65450163 | MS.gene79892:intron | 30.0% | |
| AACTGAAAACACAATCAAAC+AGG | + | chr3.1:65450324-65450343 | MS.gene79892:intron | 30.0% | |
| AATAGAAACCTTCAAAACTG+AGG | - | chr3.1:65448799-65448818 | None:intergenic | 30.0% | |
| ACAAGTTTGAAAACAAGATG+AGG | - | chr3.1:65451241-65451260 | None:intergenic | 30.0% | |
| ATTAGTTCCTACAGATAGAA+AGG | - | chr3.1:65448858-65448877 | None:intergenic | 30.0% | |
| ATTTCCAATTACTGAGTAGT+AGG | + | chr3.1:65449637-65449656 | MS.gene79892:intron | 30.0% | |
| CAAAATAAGAATGGGGAATT+GGG | + | chr3.1:65450549-65450568 | MS.gene79892:CDS | 30.0% | |
| CAAGTGGAAGAAATAACATT+GGG | + | chr3.1:65448245-65448264 | MS.gene79892:intron | 30.0% | |
| CACCATTCTTATGTTATATC+TGG | + | chr3.1:65449263-65449282 | MS.gene79892:intron | 30.0% | |
| CATATTTCTTAAAAACCGAC+TGG | + | chr3.1:65449108-65449127 | MS.gene79892:intron | 30.0% | |
| CCAAAGAAAATAAAAAACGG+TGG | - | chr3.1:65450404-65450423 | None:intergenic | 30.0% | |
| CGAAAAACTTCTATCAAAAC+AGG | + | chr3.1:65449072-65449091 | MS.gene79892:CDS | 30.0% | |
| CTAAAAGTTAATCTAGTTGC+AGG | + | chr3.1:65450756-65450775 | MS.gene79892:intron | 30.0% | |
| GAACTAAAAAGTTGTATTGG+GGG | + | chr3.1:65448328-65448347 | MS.gene79892:intron | 30.0% | |
| GACAAATAGATTAAGAGAGT+TGG | - | chr3.1:65451151-65451170 | None:intergenic | 30.0% | |
| GCTGCAAAAATAAATAAGCT+TGG | - | chr3.1:65450516-65450535 | None:intergenic | 30.0% | |
| GGAAAATGGATACTAAAGAA+AGG | - | chr3.1:65450383-65450402 | None:intergenic | 30.0% | |
| GGAACTAAAAAGTTGTATTG+GGG | + | chr3.1:65448327-65448346 | MS.gene79892:intron | 30.0% | |
| GGGAACTAAAAAGTTGTATT+GGG | + | chr3.1:65448326-65448345 | MS.gene79892:intron | 30.0% | |
| GGTAATAAGGAATTCTTTGA+TGG | + | chr3.1:65450645-65450664 | MS.gene79892:intron | 30.0% | |
| GTAATAGAGTCAATACAACT+AGG | - | chr3.1:65447740-65447759 | None:intergenic | 30.0% | |
| GTATTGTATGAAACTTCTAC+AGG | + | chr3.1:65448657-65448676 | MS.gene79892:intron | 30.0% | |
| GTTCTTCATCTAATTCATTC+TGG | + | chr3.1:65448738-65448757 | MS.gene79892:CDS | 30.0% | |
| GTTTGGTATTTGTATCTGTT+TGG | + | chr3.1:65447865-65447884 | MS.gene79892:intron | 30.0% | |
| TGAAAAGATAAGAACATAGG+TGG | - | chr3.1:65448129-65448148 | None:intergenic | 30.0% | |
| TGCTGAAAAGATAAGAACAT+AGG | - | chr3.1:65448132-65448151 | None:intergenic | 30.0% | |
| TGTCATGATTTGATAGAGTT+TGG | + | chr3.1:65450693-65450712 | MS.gene79892:intron | 30.0% | |
| TTCCAATTAAGCCAGTAAAA+CGG | - | chr3.1:65447302-65447321 | None:intergenic | 30.0% | |
| TTTACCTACTACTCAGTAAT+TGG | - | chr3.1:65449644-65449663 | None:intergenic | 30.0% | |
| TTTCATATCCATTAAAGGTG+TGG | + | chr3.1:65448979-65448998 | MS.gene79892:CDS | 30.0% | |
| TTTGATTAGCGTGATAAGAA+AGG | - | chr3.1:65449009-65449028 | None:intergenic | 30.0% | |
| ! | AATGCTTTAACTACCTTTTG+GGG | + | chr3.1:65449370-65449389 | MS.gene79892:intron | 30.0% |
| ! | ATCAGGTGTTTGAAGAATTT+TGG | - | chr3.1:65449160-65449179 | None:intergenic | 30.0% |
| ! | ATGCTGATTAAGTTCTTCAA+AGG | + | chr3.1:65449765-65449784 | MS.gene79892:intron | 30.0% |
| ! | CAATGCTTTAACTACCTTTT+GGG | + | chr3.1:65449369-65449388 | MS.gene79892:intron | 30.0% |
| ! | CCAATATTGTTACTTAAAGG+CGG | - | chr3.1:65447768-65447787 | None:intergenic | 30.0% |
| ! | GTTTCCTTTGAAAGTTTCTT+CGG | + | chr3.1:65449288-65449307 | MS.gene79892:intron | 30.0% |
| ! | TCAATGCTTTAACTACCTTT+TGG | + | chr3.1:65449368-65449387 | MS.gene79892:intron | 30.0% |
| ! | TCTGCAAAAGTATACAAGAA+CGG | - | chr3.1:65451307-65451326 | None:intergenic | 30.0% |
| ! | TGCTGATTAAGTTCTTCAAA+GGG | + | chr3.1:65449766-65449785 | MS.gene79892:intron | 30.0% |
| ! | TTACCTGTAATGAAGTTTTG+TGG | + | chr3.1:65447523-65447542 | MS.gene79892:CDS | 30.0% |
| ! | TTGTTTTCCTTTCTATCTGT+AGG | + | chr3.1:65448848-65448867 | MS.gene79892:intron | 30.0% |
| ! | TTTACTATTTAGGACTCGTA+CGG | - | chr3.1:65451191-65451210 | None:intergenic | 30.0% |
| !! | ATCAACTTCACTACTTTTGT+CGG | - | chr3.1:65451363-65451382 | None:intergenic | 30.0% |
| !! | TACCTGTAATGAAGTTTTGT+GGG | + | chr3.1:65447524-65447543 | MS.gene79892:CDS | 30.0% |
| !!! | CATTTCCGTGTTTTTAGTTT+TGG | - | chr3.1:65450144-65450163 | None:intergenic | 30.0% |
| !!! | CCACCGTTTTTTATTTTCTT+TGG | + | chr3.1:65450401-65450420 | MS.gene79892:intron | 30.0% |
| !!! | GAAAGTTTTGGAAAAAAGGA+AGG | + | chr3.1:65448220-65448239 | MS.gene79892:intron | 30.0% |
| !!! | TGTAGTTTTAGGCTTTGTTT+GGG | - | chr3.1:65448561-65448580 | None:intergenic | 30.0% |
| !!! | TTGATCAACTAGTTTTGGTT+TGG | + | chr3.1:65447848-65447867 | MS.gene79892:intron | 30.0% |
| !!! | TTGTAGTTTTAGGCTTTGTT+TGG | - | chr3.1:65448562-65448581 | None:intergenic | 30.0% |
| !!! | TTTTATTTTCTTTGGCCTTG+CGG | + | chr3.1:65450409-65450428 | MS.gene79892:intron | 30.0% |
| !!! | TTTTTTTAAAGCGGATAGAG+AGG | - | chr3.1:65449527-65449546 | None:intergenic | 30.0% |
| AAAAGTTTCTTTGTGCCATC+AGG | - | chr3.1:65449177-65449196 | None:intergenic | 35.0% | |
| AACATTCCATTCGTTTAGTG+GGG | - | chr3.1:65449349-65449368 | None:intergenic | 35.0% | |
| AACTTAATCAGCATTGTGCA+AGG | - | chr3.1:65449759-65449778 | None:intergenic | 35.0% | |
| AAGAGATAGGATAAGTCTTC+AGG | - | chr3.1:65447395-65447414 | None:intergenic | 35.0% | |
| AAGCACTTGTAAGTTGTAAG+TGG | - | chr3.1:65448011-65448030 | None:intergenic | 35.0% | |
| AAGCCCAGCAAAATAAGAAT+GGG | + | chr3.1:65450541-65450560 | MS.gene79892:CDS | 35.0% | |
| ACTTAATCAGCATTGTGCAA+GGG | - | chr3.1:65449758-65449777 | None:intergenic | 35.0% | |
| AGAGATAGGATAAGTCTTCA+GGG | - | chr3.1:65447394-65447413 | None:intergenic | 35.0% | |
| AGCACTTGTAAGTTGTAAGT+GGG | - | chr3.1:65448010-65448029 | None:intergenic | 35.0% | |
| AGTAAAAGCTGTAGATTTCG+AGG | - | chr3.1:65448768-65448787 | None:intergenic | 35.0% | |
| AGTTGCAACAAAGCTATTAC+AGG | - | chr3.1:65448099-65448118 | None:intergenic | 35.0% | |
| ATAACATAAGAATGGTGAGC+AGG | - | chr3.1:65449260-65449279 | None:intergenic | 35.0% | |
| ATACAAAACCCTCCTCATAT+AGG | + | chr3.1:65448304-65448323 | MS.gene79892:intron | 35.0% | |
| ATGACTAGTGGAGAAGAAAA+TGG | - | chr3.1:65449893-65449912 | None:intergenic | 35.0% | |
| ATTCCATCCAAGTTTCAAAC+TGG | + | chr3.1:65447187-65447206 | MS.gene79892:intron | 35.0% | |
| CAGGTAACCTCATCTTTAAA+TGG | - | chr3.1:65447510-65447529 | None:intergenic | 35.0% | |
| CCGCCTTTAAGTAACAATAT+TGG | + | chr3.1:65447765-65447784 | MS.gene79892:intron | 35.0% | |
| GAACATTCCATTCGTTTAGT+GGG | - | chr3.1:65449350-65449369 | None:intergenic | 35.0% | |
| GACAAAAGTAGTGAAGTTGA+TGG | + | chr3.1:65451362-65451381 | MS.gene79892:CDS | 35.0% | |
| GAGATGATGCAAATTCCAAT+CGG | + | chr3.1:65447628-65447647 | MS.gene79892:CDS | 35.0% | |
| GCAAAATAAGAATGGGGAAT+TGG | + | chr3.1:65450548-65450567 | MS.gene79892:CDS | 35.0% | |
| GCAAGTGGAAGAAATAACAT+TGG | + | chr3.1:65448244-65448263 | MS.gene79892:intron | 35.0% | |
| GGGGAACTAAAAAGTTGTAT+TGG | + | chr3.1:65448325-65448344 | MS.gene79892:intron | 35.0% | |
| GGTTTCTCTATCAGGTAATA+AGG | + | chr3.1:65450632-65450651 | MS.gene79892:intron | 35.0% | |
| GTAAAAGCTGTAGATTTCGA+GGG | - | chr3.1:65448767-65448786 | None:intergenic | 35.0% | |
| GTATCCAGAGATAAGGAAAA+TGG | + | chr3.1:65449314-65449333 | MS.gene79892:intron | 35.0% | |
| GTGGAAAATATAGAGGGAAA+TGG | - | chr3.1:65448499-65448518 | None:intergenic | 35.0% | |
| GTGTTTGAGTGATTAAGAGA+TGG | - | chr3.1:65451027-65451046 | None:intergenic | 35.0% | |
| GTTTGAAAACAAGATGAGGT+TGG | - | chr3.1:65451237-65451256 | None:intergenic | 35.0% | |
| TAAAAAGTTGTATTGGGGGA+GGG | + | chr3.1:65448332-65448351 | MS.gene79892:intron | 35.0% | |
| TAACACACGATACTATACAG+TGG | + | chr3.1:65451053-65451072 | MS.gene79892:intron | 35.0% | |
| TACAAAACCCTCCTCATATA+GGG | + | chr3.1:65448305-65448324 | MS.gene79892:intron | 35.0% | |
| TACAAGAACGGTTGTATTAC+TGG | - | chr3.1:65451295-65451314 | None:intergenic | 35.0% | |
| TACGGGGACATGATAAAATA+AGG | - | chr3.1:65451173-65451192 | None:intergenic | 35.0% | |
| TATACTGCTATTCCCATGAA+AGG | - | chr3.1:65447986-65448005 | None:intergenic | 35.0% | |
| TATCACGCTAATCAAAAGCT+AGG | + | chr3.1:65449013-65449032 | MS.gene79892:CDS | 35.0% | |
| TATGTTCAAGTAGCTGGTTA+TGG | + | chr3.1:65447704-65447723 | MS.gene79892:intron | 35.0% | |
| TCTCTGTTTAGGAACTTCAA+TGG | - | chr3.1:65447064-65447083 | None:intergenic | 35.0% | |
| TGAACATTCCATTCGTTTAG+TGG | - | chr3.1:65449351-65449370 | None:intergenic | 35.0% | |
| TGATATTTACAAGGTTGGAG+CGG | + | chr3.1:65448919-65448938 | MS.gene79892:intron | 35.0% | |
| TGGAAGAAATAACATTGGGA+GGG | + | chr3.1:65448249-65448268 | MS.gene79892:intron | 35.0% | |
| TTCCCACAAAACTTCATTAC+AGG | - | chr3.1:65447529-65447548 | None:intergenic | 35.0% | |
| TTTGAGTGATTAAGAGATGG+AGG | - | chr3.1:65451024-65451043 | None:intergenic | 35.0% | |
| ! | AGAACTGCTGAATAGTGTTT+TGG | + | chr3.1:65450101-65450120 | MS.gene79892:intron | 35.0% |
| ! | TCTTGTTATGTTCAAGTAGC+TGG | + | chr3.1:65447698-65447717 | MS.gene79892:intron | 35.0% |
| ! | TGTTTTCATGTAAGTGCTTG+TGG | + | chr3.1:65447156-65447175 | MS.gene79892:intron | 35.0% |
| ! | TTACTATTTAGGACTCGTAC+GGG | - | chr3.1:65451190-65451209 | None:intergenic | 35.0% |
| ! | TTATTGGTTGAAGAACCTCA+AGG | + | chr3.1:65447950-65447969 | MS.gene79892:intron | 35.0% |
| ! | TTGTTCCTTTTGTGACTGTA+AGG | + | chr3.1:65448165-65448184 | MS.gene79892:intron | 35.0% |
| ! | TTTTCCTTATCTCTGGATAC+AGG | - | chr3.1:65449314-65449333 | None:intergenic | 35.0% |
| ! | TTTTTATGCCCTTCCAAAAC+TGG | + | chr3.1:65449194-65449213 | MS.gene79892:intron | 35.0% |
| !! | AGGAAACGGATGATTAGTTT+AGG | + | chr3.1:65447321-65447340 | MS.gene79892:intron | 35.0% |
| !! | CAATTGTTTGGCTCTTTACT+CGG | + | chr3.1:65448049-65448068 | MS.gene79892:intron | 35.0% |
| !! | GGAAGTTGATCAACTAGTTT+TGG | + | chr3.1:65447843-65447862 | MS.gene79892:intron | 35.0% |
| !! | TGAAGATTCCTCAGTTTTGA+AGG | + | chr3.1:65448788-65448807 | MS.gene79892:CDS | 35.0% |
| !!! | AGGGGAAAGTTTTGGAAAAA+AGG | + | chr3.1:65448216-65448235 | MS.gene79892:intron | 35.0% |
| !!! | ATTCCCCATTCTTATTTTGC+TGG | - | chr3.1:65450548-65450567 | None:intergenic | 35.0% |
| !!! | CTTTTTAGTTCCCCTATATG+AGG | - | chr3.1:65448319-65448338 | None:intergenic | 35.0% |
| !!! | GTTTTACTGGCTTAATTGGA+AGG | + | chr3.1:65447301-65447320 | MS.gene79892:intron | 35.0% |
| !!! | TAAGGCTTTGTTTGCGATTT+TGG | + | chr3.1:65448183-65448202 | MS.gene79892:intron | 35.0% |
| !!! | TACCGTTTTACTGGCTTAAT+TGG | + | chr3.1:65447297-65447316 | MS.gene79892:intron | 35.0% |
| !!! | TTCCCCATTCTTATTTTGCT+GGG | - | chr3.1:65450547-65450566 | None:intergenic | 35.0% |
| AAAACAATCAAGCAGACGCA+TGG | - | chr3.1:65450360-65450379 | None:intergenic | 40.0% | |
| AAACAATCAAGCAGACGCAT+GGG | - | chr3.1:65450359-65450378 | None:intergenic | 40.0% | |
| AAGGTCTTCCACACCTTTAA+TGG | - | chr3.1:65448990-65449009 | None:intergenic | 40.0% | |
| AATGGCTTCAAGATCTTCCT+GGG | - | chr3.1:65446671-65446690 | None:intergenic | 40.0% | |
| ACAAAACCCTCCTCATATAG+GGG | + | chr3.1:65448306-65448325 | MS.gene79892:intron | 40.0% | |
| AGCCCAGCAAAATAAGAATG+GGG | + | chr3.1:65450542-65450561 | MS.gene79892:CDS | 40.0% | |
| AGGAAGAAAACGTCCTTTCA+TGG | + | chr3.1:65447970-65447989 | MS.gene79892:intron | 40.0% | |
| AGTGATTAAGAGATGGAGGA+TGG | - | chr3.1:65451020-65451039 | None:intergenic | 40.0% | |
| ATAAGAATGGTGAGCAGGTT+TGG | - | chr3.1:65449255-65449274 | None:intergenic | 40.0% | |
| ATAGAGAGGTAGGTCATATG+TGG | - | chr3.1:65449513-65449532 | None:intergenic | 40.0% | |
| ATATTTACAAGGTTGGAGCG+GGG | + | chr3.1:65448921-65448940 | MS.gene79892:intron | 40.0% | |
| CAAAGCCTTACAGTCACAAA+AGG | - | chr3.1:65448173-65448192 | None:intergenic | 40.0% | |
| CAATCGGATTTGACATTGAG+TGG | + | chr3.1:65447644-65447663 | MS.gene79892:CDS | 40.0% | |
| CACTCAATGTCAAATCCGAT+TGG | - | chr3.1:65447646-65447665 | None:intergenic | 40.0% | |
| CAGCAGGACATTTAATGATG+TGG | + | chr3.1:65447558-65447577 | MS.gene79892:CDS | 40.0% | |
| CATGGAGTGATGTACACTAA+TGG | - | chr3.1:65450915-65450934 | None:intergenic | 40.0% | |
| CTAAAAAGTTGTATTGGGGG+AGG | + | chr3.1:65448331-65448350 | MS.gene79892:intron | 40.0% | |
| CTGGCTTAATTGGAAGGAAA+CGG | + | chr3.1:65447307-65447326 | MS.gene79892:intron | 40.0% | |
| GAAGCCCAGCAAAATAAGAA+TGG | + | chr3.1:65450540-65450559 | MS.gene79892:CDS | 40.0% | |
| GATATTTACAAGGTTGGAGC+GGG | + | chr3.1:65448920-65448939 | MS.gene79892:intron | 40.0% | |
| GCAACAATACAGATGACTAG+TGG | - | chr3.1:65449905-65449924 | None:intergenic | 40.0% | |
| GGAAGAAAACGTCCTTTCAT+GGG | + | chr3.1:65447971-65447990 | MS.gene79892:intron | 40.0% | |
| GGAAGAAATAACATTGGGAG+GGG | + | chr3.1:65448250-65448269 | MS.gene79892:intron | 40.0% | |
| GGAATTCCTATCAACCTAGT+TGG | - | chr3.1:65447909-65447928 | None:intergenic | 40.0% | |
| GTGGAAGAAATAACATTGGG+AGG | + | chr3.1:65448248-65448267 | MS.gene79892:intron | 40.0% | |
| GTGGGAAAATTATGTACAGC+AGG | + | chr3.1:65447542-65447561 | MS.gene79892:CDS | 40.0% | |
| TAAGAATGGTGAGCAGGTTT+GGG | - | chr3.1:65449254-65449273 | None:intergenic | 40.0% | |
| TAGTATGCCTACAAGAGTGA+AGG | + | chr3.1:65447822-65447841 | MS.gene79892:intron | 40.0% | |
| TATGAGATTCAGGCTCAGTT+TGG | - | chr3.1:65447351-65447370 | None:intergenic | 40.0% | |
| TCAACTTCCTTCACTCTTGT+AGG | - | chr3.1:65447832-65447851 | None:intergenic | 40.0% | |
| TCAAGATCTTCCTGGGATAA+AGG | - | chr3.1:65446664-65446683 | None:intergenic | 40.0% | |
| TGCAAGGCCATTTAAAGATG+AGG | + | chr3.1:65447500-65447519 | MS.gene79892:intron | 40.0% | |
| TGCTTCTTGGTTTCTCTATC+AGG | + | chr3.1:65450624-65450643 | MS.gene79892:CDS | 40.0% | |
| TTAATCTAGTTGCAGGGGAT+TGG | + | chr3.1:65450763-65450782 | MS.gene79892:intron | 40.0% | |
| TTACTCGGTCACATAGCTTA+TGG | + | chr3.1:65448064-65448083 | MS.gene79892:intron | 40.0% | |
| TTAGTTCCCCTATATGAGGA+GGG | - | chr3.1:65448315-65448334 | None:intergenic | 40.0% | |
| TTATGACAGGGAGTCTATGT+AGG | + | chr3.1:65449413-65449432 | MS.gene79892:intron | 40.0% | |
| ! | AAAGGACGTTTTCTTCCTTG+AGG | - | chr3.1:65447968-65447987 | None:intergenic | 40.0% |
| ! | ACCTTCAAAAGAGGTTGGTT+CGG | + | chr3.1:65447673-65447692 | MS.gene79892:intron | 40.0% |
| ! | ATCAACCTAGTTGGTTTCTC+TGG | - | chr3.1:65447900-65447919 | None:intergenic | 40.0% |
| ! | CTATGAGCCAGTTTGAAACT+TGG | - | chr3.1:65447197-65447216 | None:intergenic | 40.0% |
| ! | TAATCAATATAGTGGGGGAG+AGG | - | chr3.1:65446868-65446887 | None:intergenic | 40.0% |
| ! | TACTATTTAGGACTCGTACG+GGG | - | chr3.1:65451189-65451208 | None:intergenic | 40.0% |
| ! | TCATGTTAACCAGCCAGTTT+TGG | - | chr3.1:65449210-65449229 | None:intergenic | 40.0% |
| ! | TTTAAAGCGGATAGAGAGGT+AGG | - | chr3.1:65449523-65449542 | None:intergenic | 40.0% |
| ! | TTTAGTTCCCCTATATGAGG+AGG | - | chr3.1:65448316-65448335 | None:intergenic | 40.0% |
| ! | TTTGTATCTGTTTGGGACCA+CGG | + | chr3.1:65447873-65447892 | MS.gene79892:intron | 40.0% |
| !! | AACCAACCTCTTTTGAAGGT+GGG | - | chr3.1:65447673-65447692 | None:intergenic | 40.0% |
| !! | CTTTGTTTGCGATTTTGGAG+GGG | + | chr3.1:65448188-65448207 | MS.gene79892:intron | 40.0% |
| !! | GAGAAACCAACTAGGTTGAT+AGG | + | chr3.1:65447900-65447919 | MS.gene79892:intron | 40.0% |
| !! | GTGCTTTGTTACCGTTTTAC+TGG | + | chr3.1:65447288-65447307 | MS.gene79892:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr3.1:65448554-65448573 | None:intergenic | 40.0% |
| !!! | GCTTTGTTTGCGATTTTGGA+GGG | + | chr3.1:65448187-65448206 | MS.gene79892:intron | 40.0% |
| !!! | TTAACCAGCCAGTTTTGGAA+GGG | - | chr3.1:65449205-65449224 | None:intergenic | 40.0% |
| AACCGACTGGATTGTGTACA+TGG | + | chr3.1:65449121-65449140 | MS.gene79892:intron | 45.0% | |
| AAGCAGACGCATGGGAATTA+AGG | - | chr3.1:65450351-65450370 | None:intergenic | 45.0% | |
| ACAGGGAGTCTATGTAGGTT+TGG | + | chr3.1:65449418-65449437 | MS.gene79892:intron | 45.0% | |
| ACCGACTGGATTGTGTACAT+GGG | + | chr3.1:65449122-65449141 | MS.gene79892:intron | 45.0% | |
| AGAAATAACATTGGGAGGGG+AGG | + | chr3.1:65448253-65448272 | MS.gene79892:intron | 45.0% | |
| AGATTGAAGAGTGGCGTCAA+TGG | - | chr3.1:65446689-65446708 | None:intergenic | 45.0% | |
| AGCAGACGCATGGGAATTAA+GGG | - | chr3.1:65450350-65450369 | None:intergenic | 45.0% | |
| ATCGTTCAGGCGAAGGAAAA+AGG | + | chr3.1:65446587-65446606 | MS.gene79892:CDS | 45.0% | |
| CAATGGCTTCAAGATCTTCC+TGG | - | chr3.1:65446672-65446691 | None:intergenic | 45.0% | |
| CACGCTAATCAAAAGCTAGG+TGG | + | chr3.1:65449016-65449035 | MS.gene79892:CDS | 45.0% | |
| CAGGCCGAAGAAACTTTCAA+AGG | - | chr3.1:65449295-65449314 | None:intergenic | 45.0% | |
| CCTAAATGCCAACAGAATGC+AGG | - | chr3.1:65446928-65446947 | None:intergenic | 45.0% | |
| CCTGCATTCTGTTGGCATTT+AGG | + | chr3.1:65446925-65446944 | MS.gene79892:intron | 45.0% | |
| GAAATAACATTGGGAGGGGA+GGG | + | chr3.1:65448254-65448273 | MS.gene79892:intron | 45.0% | |
| GAAGGTGAGAAAGAGAGAGA+AGG | - | chr3.1:65446826-65446845 | None:intergenic | 45.0% | |
| GATGCAAGACCCCACTTATT+CGG | - | chr3.1:65449046-65449065 | None:intergenic | 45.0% | |
| GATTAAGAGATGGAGGATGG+CGG | - | chr3.1:65451017-65451036 | None:intergenic | 45.0% | |
| GCTAATCAAAAGCTAGGTGG+AGG | + | chr3.1:65449019-65449038 | MS.gene79892:CDS | 45.0% | |
| GGAAAAAAGGAAGGAGCAAG+TGG | + | chr3.1:65448229-65448248 | MS.gene79892:intron | 45.0% | |
| GTACACTAATGGCAACAGAG+TGG | - | chr3.1:65450904-65450923 | None:intergenic | 45.0% | |
| GTCATATGTGGCATTAGAGC+TGG | - | chr3.1:65449501-65449520 | None:intergenic | 45.0% | |
| GTGAGAAAGAGAGAGAAGGT+GGG | - | chr3.1:65446822-65446841 | None:intergenic | 45.0% | |
| TCACTGTTCCTGCATTCTGT+TGG | + | chr3.1:65446917-65446936 | MS.gene79892:intron | 45.0% | |
| TCCCATGTACACAATCCAGT+CGG | - | chr3.1:65449126-65449145 | None:intergenic | 45.0% | |
| TCGTTCAGGCGAAGGAAAAA+GGG | + | chr3.1:65446588-65446607 | MS.gene79892:CDS | 45.0% | |
| TGGGGGGTGGAAAATATAGA+GGG | - | chr3.1:65448505-65448524 | None:intergenic | 45.0% | |
| TTGGGGGGTGGAAAATATAG+AGG | - | chr3.1:65448506-65448525 | None:intergenic | 45.0% | |
| TTGTGCAAGGGACAAAACTC+TGG | - | chr3.1:65449746-65449765 | None:intergenic | 45.0% | |
| ! | ACCGAACCAACCTCTTTTGA+AGG | - | chr3.1:65447677-65447696 | None:intergenic | 45.0% |
| ! | ACTTTTGTCGGCAACTTCCT+GGG | - | chr3.1:65451351-65451370 | None:intergenic | 45.0% |
| ! | CCACAGATGCTTTTGCTTCT+TGG | + | chr3.1:65450611-65450630 | MS.gene79892:CDS | 45.0% |
| ! | GAGCCAGTTTGAAACTTGGA+TGG | - | chr3.1:65447193-65447212 | None:intergenic | 45.0% |
| ! | GCGTCCATTTTCCTTATCTC+TGG | - | chr3.1:65449321-65449340 | None:intergenic | 45.0% |
| ! | TACTTTTGTCGGCAACTTCC+TGG | - | chr3.1:65451352-65451371 | None:intergenic | 45.0% |
| !! | CCAAGAAGCAAAAGCATCTG+TGG | - | chr3.1:65450614-65450633 | None:intergenic | 45.0% |
| !! | CGATGATGATGGAGAGTGTT+GGG | - | chr3.1:65450971-65450990 | None:intergenic | 45.0% |
| !! | GAACCAACCTCTTTTGAAGG+TGG | - | chr3.1:65447674-65447693 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr3.1:65448550-65448569 | None:intergenic | 45.0% |
| !! | TTTGCGATTTTGGAGGGGAA+GGG | + | chr3.1:65448193-65448212 | MS.gene79892:intron | 45.0% |
| !!! | GGCTTTGTTTGCGATTTTGG+AGG | + | chr3.1:65448186-65448205 | MS.gene79892:intron | 45.0% |
| !!! | GTTAACCAGCCAGTTTTGGA+AGG | - | chr3.1:65449206-65449225 | None:intergenic | 45.0% |
| ACGGACCAGAGAAACCAACT+AGG | + | chr3.1:65447892-65447911 | MS.gene79892:intron | 50.0% | |
| ACTTCTACAGGTGTTCCACC+CGG | + | chr3.1:65448669-65448688 | MS.gene79892:intron | 50.0% | |
| AGATGCATGGGCAGCAGTAA+TGG | - | chr3.1:65450871-65450890 | None:intergenic | 50.0% | |
| AGGTGGAGGTCCGAATAAGT+GGG | + | chr3.1:65449033-65449052 | MS.gene79892:CDS | 50.0% | |
| ATGGGCAGCAGTAATGGTAG+AGG | - | chr3.1:65450865-65450884 | None:intergenic | 50.0% | |
| CTCTCTTTCTCACCTTCTCC+AGG | + | chr3.1:65446829-65446848 | MS.gene79892:CDS | 50.0% | |
| CTGTCTCCCCACTAAACGAA+TGG | + | chr3.1:65449340-65449359 | MS.gene79892:intron | 50.0% | |
| GACCCACCTTCAAAAGAGGT+TGG | + | chr3.1:65447668-65447687 | MS.gene79892:intron | 50.0% | |
| GATTGGCGGTGATGCTTCTA+AGG | + | chr3.1:65448943-65448962 | MS.gene79892:CDS | 50.0% | |
| GGGGAGAGAAGATTGAAGAG+TGG | - | chr3.1:65446698-65446717 | None:intergenic | 50.0% | |
| GGTGAGAAAGAGAGAGAAGG+TGG | - | chr3.1:65446823-65446842 | None:intergenic | 50.0% | |
| GTGAGAGATGAAGGGACGTT+TGG | - | chr3.1:65446740-65446759 | None:intergenic | 50.0% | |
| GTTTACGCACGCACATGACA+TGG | + | chr3.1:65446989-65447008 | MS.gene79892:intron | 50.0% | |
| GTTTGGGAGTTTGGAGGGAA+GGG | - | chr3.1:65448545-65448564 | None:intergenic | 50.0% | |
| TAAAGATCTCCCAGATGCCC+AGG | + | chr3.1:65451331-65451350 | MS.gene79892:CDS | 50.0% | |
| TAATGGCAACAGAGTGGCAG+TGG | - | chr3.1:65450898-65450917 | None:intergenic | 50.0% | |
| TAGGTGGAGGTCCGAATAAG+TGG | + | chr3.1:65449032-65449051 | MS.gene79892:CDS | 50.0% | |
| TATGCCCTTCCAAAACTGGC+TGG | + | chr3.1:65449198-65449217 | MS.gene79892:intron | 50.0% | |
| TCACATTTGTCCTCTCCGCA+AGG | - | chr3.1:65450427-65450446 | None:intergenic | 50.0% | |
| TCGGCCTGTATCCAGAGATA+AGG | + | chr3.1:65449307-65449326 | MS.gene79892:intron | 50.0% | |
| TGAAGAGCGATGAGCGATGT+GGG | - | chr3.1:65446796-65446815 | None:intergenic | 50.0% | |
| TGCGGAGAGGACAAATGTGA+AGG | + | chr3.1:65450427-65450446 | MS.gene79892:intron | 50.0% | |
| TGGAGACCCACCTTCAAAAG+AGG | + | chr3.1:65447664-65447683 | MS.gene79892:CDS | 50.0% | |
| TGGGCAGCAGTAATGGTAGA+GGG | - | chr3.1:65450864-65450883 | None:intergenic | 50.0% | |
| TGGTGAAAGGTGGTCAGTGA+CGG | - | chr3.1:65450942-65450961 | None:intergenic | 50.0% | |
| TGTTGGGTGGCAATGGTGAA+AGG | - | chr3.1:65450955-65450974 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTGGAGGGA+AGG | - | chr3.1:65448546-65448565 | None:intergenic | 50.0% | |
| TTCAGGCGAAGGAAAAAGGG+AGG | + | chr3.1:65446591-65446610 | MS.gene79892:CDS | 50.0% | |
| TTGAAGAGCGATGAGCGATG+TGG | - | chr3.1:65446797-65446816 | None:intergenic | 50.0% | |
| ! | AATATAGTGGGGGAGAGGAG+AGG | - | chr3.1:65446863-65446882 | None:intergenic | 50.0% |
| ! | GCAGGTTTGGGACATTGAAG+TGG | - | chr3.1:65449242-65449261 | None:intergenic | 50.0% |
| ! | GTTGTATTGGGGGAGGGTTT+TGG | + | chr3.1:65448338-65448357 | MS.gene79892:intron | 50.0% |
| ! | TAGTTGGTTTCTCTGGTCCG+TGG | - | chr3.1:65447893-65447912 | None:intergenic | 50.0% |
| !! | GAAGGGACGTTTGGTAGTGA+TGG | - | chr3.1:65446731-65446750 | None:intergenic | 50.0% |
| !! | GCGATGATGATGGAGAGTGT+TGG | - | chr3.1:65450972-65450991 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr3.1:65448551-65448570 | None:intergenic | 50.0% |
| !! | GTAGAGGGCATCAAGTGCAA+GGG | - | chr3.1:65450849-65450868 | None:intergenic | 50.0% |
| !! | GTTTGCGATTTTGGAGGGGA+AGG | + | chr3.1:65448192-65448211 | MS.gene79892:intron | 50.0% |
| !! | TGATGATGGAGAGTGTTGGG+TGG | - | chr3.1:65450968-65450987 | None:intergenic | 50.0% |
| !!! | CTGCATCACTGCTGTTTTCC+CGG | - | chr3.1:65448691-65448710 | None:intergenic | 50.0% |
| !!! | TATTGGGGGAGGGTTTTGGA+GGG | + | chr3.1:65448342-65448361 | MS.gene79892:intron | 50.0% |
| !!! | TGCATCACTGCTGTTTTCCC+GGG | - | chr3.1:65448690-65448709 | None:intergenic | 50.0% |
| !!! | TTTTCTTTGGCCTTGCGGAG+AGG | + | chr3.1:65450414-65450433 | MS.gene79892:intron | 50.0% |
| AAGTGCAAGGGTGGAAGGCA+GGG | - | chr3.1:65450837-65450856 | None:intergenic | 55.0% | |
| AGGAGGAGCTTGGTTTCGAG+CGG | + | chr3.1:65446611-65446630 | MS.gene79892:CDS | 55.0% | |
| AGGCGAAGGAAAAAGGGAGG+AGG | + | chr3.1:65446594-65446613 | MS.gene79892:CDS | 55.0% | |
| AGGGAAGGGCAAGGAAGGAA+GGG | - | chr3.1:65448531-65448550 | None:intergenic | 55.0% | |
| AGGGGGAGAGTGAGAGATGA+AGG | - | chr3.1:65446749-65446768 | None:intergenic | 55.0% | |
| CAGGGTGACAGCGATGATGA+TGG | - | chr3.1:65450982-65451001 | None:intergenic | 55.0% | |
| CGAATGCGAGCCTTTATCCC+AGG | + | chr3.1:65446651-65446670 | MS.gene79892:CDS | 55.0% | |
| CTCGCATTCGCACACGAATG+AGG | - | chr3.1:65446641-65446660 | None:intergenic | 55.0% | |
| CTTCTACAGGTGTTCCACCC+GGG | + | chr3.1:65448670-65448689 | MS.gene79892:intron | 55.0% | |
| GCAAGGAAGGAAGGGCTTTG+GGG | - | chr3.1:65448523-65448542 | None:intergenic | 55.0% | |
| GCATCAAGTGCAAGGGTGGA+AGG | - | chr3.1:65450842-65450861 | None:intergenic | 55.0% | |
| GGAAAAAGGGAGGAGGAGCT+TGG | + | chr3.1:65446601-65446620 | MS.gene79892:CDS | 55.0% | |
| GGCAAGGAAGGAAGGGCTTT+GGG | - | chr3.1:65448524-65448543 | None:intergenic | 55.0% | |
| GGGGGAGAGTGAGAGATGAA+GGG | - | chr3.1:65446748-65446767 | None:intergenic | 55.0% | |
| GGTGGAGGTCCGAATAAGTG+GGG | + | chr3.1:65449034-65449053 | MS.gene79892:CDS | 55.0% | |
| TACAAGGTTGGAGCGGGGAT+TGG | + | chr3.1:65448926-65448945 | MS.gene79892:intron | 55.0% | |
| TGAGCGATGTGGGTAAGCGA+CGG | - | chr3.1:65446786-65446805 | None:intergenic | 55.0% | |
| TGGGTGGCAATGGTGAAAGG+TGG | - | chr3.1:65450952-65450971 | None:intergenic | 55.0% | |
| TTTGGAGGGAAGGGCAAGGA+AGG | - | chr3.1:65448536-65448555 | None:intergenic | 55.0% | |
| ! | ATGGAGGATGGCGGTGATGA+AGG | - | chr3.1:65451008-65451027 | None:intergenic | 55.0% |
| ! | CAAGGAAGGAAGGGCTTTGG+GGG | - | chr3.1:65448522-65448541 | None:intergenic | 55.0% |
| ! | GGCAGTGGTGGAAGATGCAT+GGG | - | chr3.1:65450883-65450902 | None:intergenic | 55.0% |
| ! | GGGAAGGGAGGGGAAAGTTT+TGG | + | chr3.1:65448208-65448227 | MS.gene79892:intron | 55.0% |
| ! | TGGAGGATGGCGGTGATGAA+GGG | - | chr3.1:65451007-65451026 | None:intergenic | 55.0% |
| ! | TGGCAGTGGTGGAAGATGCA+TGG | - | chr3.1:65450884-65450903 | None:intergenic | 55.0% |
| !! | AAGGAAGGAAGGGCTTTGGG+GGG | - | chr3.1:65448521-65448540 | None:intergenic | 55.0% |
| !! | ACGTTTGGTAGTGATGGCGG+TGG | - | chr3.1:65446725-65446744 | None:intergenic | 55.0% |
| !! | CGATTTTGGAGGGGAAGGGA+GGG | + | chr3.1:65448197-65448216 | MS.gene79892:intron | 55.0% |
| !! | CGTTTGGTAGTGATGGCGGT+GGG | - | chr3.1:65446724-65446743 | None:intergenic | 55.0% |
| !! | GATTTTGGAGGGGAAGGGAG+GGG | + | chr3.1:65448198-65448217 | MS.gene79892:intron | 55.0% |
| !! | GGGACGTTTGGTAGTGATGG+CGG | - | chr3.1:65446728-65446747 | None:intergenic | 55.0% |
| !! | GGTAGAGGGCATCAAGTGCA+AGG | - | chr3.1:65450850-65450869 | None:intergenic | 55.0% |
| !! | GTAGTGATGGCGGTGGGTTT+GGG | - | chr3.1:65446718-65446737 | None:intergenic | 55.0% |
| !! | GTATTGGGGGAGGGTTTTGG+AGG | + | chr3.1:65448341-65448360 | MS.gene79892:intron | 55.0% |
| !! | TAGTGATGGCGGTGGGTTTG+GGG | - | chr3.1:65446717-65446736 | None:intergenic | 55.0% |
| !! | TGGAGAGTGTTGGGTGGCAA+TGG | - | chr3.1:65450962-65450981 | None:intergenic | 55.0% |
| !!! | ATCACTGCTGTTTTCCCGGG+TGG | - | chr3.1:65448687-65448706 | None:intergenic | 55.0% |
| AAGGCAGGGAAGGGAGGAAG+AGG | - | chr3.1:65450823-65450842 | None:intergenic | 60.0% | |
| AAGGTTGGAGCGGGGATTGG+CGG | + | chr3.1:65448929-65448948 | MS.gene79892:intron | 60.0% | |
| ACATTGGGAGGGGAGGGCTT+TGG | + | chr3.1:65448260-65448279 | MS.gene79892:intron | 60.0% | |
| AGAGGAGAGGAAGTGGGACC+TGG | - | chr3.1:65446850-65446869 | None:intergenic | 60.0% | |
| ATTGGGAGGGGAGGGCTTTG+GGG | + | chr3.1:65448262-65448281 | MS.gene79892:intron | 60.0% | |
| CAAGGGTGGAAGGCAGGGAA+GGG | - | chr3.1:65450832-65450851 | None:intergenic | 60.0% | |
| CAAGTGCAAGGGTGGAAGGC+AGG | - | chr3.1:65450838-65450857 | None:intergenic | 60.0% | |
| CATTGGGAGGGGAGGGCTTT+GGG | + | chr3.1:65448261-65448280 | MS.gene79892:intron | 60.0% | |
| CGGCAACTTCCTGGGCATCT+GGG | - | chr3.1:65451343-65451362 | None:intergenic | 60.0% | |
| GAGGAAGTGGGACCTGGAGA+AGG | - | chr3.1:65446844-65446863 | None:intergenic | 60.0% | |
| GAGGGAAGGGCAAGGAAGGA+AGG | - | chr3.1:65448532-65448551 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGAAGGGCA+AGG | - | chr3.1:65448540-65448559 | None:intergenic | 60.0% | |
| GGGCAAGGAAGGAAGGGCTT+TGG | - | chr3.1:65448525-65448544 | None:intergenic | 60.0% | |
| GTGGTCAGTGACGGCAGTCA+TGG | - | chr3.1:65450933-65450952 | None:intergenic | 60.0% | |
| TCGGCAACTTCCTGGGCATC+TGG | - | chr3.1:65451344-65451363 | None:intergenic | 60.0% | |
| TGGCAACAGAGTGGCAGTGG+TGG | - | chr3.1:65450895-65450914 | None:intergenic | 60.0% | |
| TGGGGGAGAGGAGAGGAAGT+GGG | - | chr3.1:65446856-65446875 | None:intergenic | 60.0% | |
| ! | ATGGCGGTGATGAAGGGTGC+AGG | - | chr3.1:65451001-65451020 | None:intergenic | 60.0% |
| ! | TGGCGGTGATGAAGGGTGCA+GGG | - | chr3.1:65451000-65451019 | None:intergenic | 60.0% |
| !! | GAGGGCATCAAGTGCAAGGG+TGG | - | chr3.1:65450846-65450865 | None:intergenic | 60.0% |
| !! | GCGATTTTGGAGGGGAAGGG+AGG | + | chr3.1:65448196-65448215 | MS.gene79892:intron | 60.0% |
| !! | GGTAGTGATGGCGGTGGGTT+TGG | - | chr3.1:65446719-65446738 | None:intergenic | 60.0% |
| GCAAGGGTGGAAGGCAGGGA+AGG | - | chr3.1:65450833-65450852 | None:intergenic | 65.0% | |
| GCGATGTGGGTAAGCGACGG+CGG | - | chr3.1:65446783-65446802 | None:intergenic | 65.0% | |
| GTGGGGGAGAGGAGAGGAAG+TGG | - | chr3.1:65446857-65446876 | None:intergenic | 65.0% | |
| ! | TTGGGAGGGGAGGGCTTTGG+GGG | + | chr3.1:65448263-65448282 | MS.gene79892:intron | 65.0% |
| !! | GAAGGAAGGGCTTTGGGGGG+TGG | - | chr3.1:65448518-65448537 | None:intergenic | 65.0% |
| GGGTGGAAGGCAGGGAAGGG+AGG | - | chr3.1:65450829-65450848 | None:intergenic | 70.0% | |
| GTAAGCGACGGCGGCTGCTG+CGG | - | chr3.1:65446774-65446793 | None:intergenic | 70.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | + | chr3.1:65448264-65448283 | MS.gene79892:intron | 70.0% |
| !! | GGGAGGGGAGGGCTTTGGGG+GGG | + | chr3.1:65448265-65448284 | MS.gene79892:intron | 75.0% |
| ! | ACGGCGGCTGCTGCGGCGAG+GGG | - | chr3.1:65446767-65446786 | None:intergenic | 80.0% |
| ! | GACGGCGGCTGCTGCGGCGA+GGG | - | chr3.1:65446768-65446787 | None:intergenic | 80.0% |
| ! | CGACGGCGGCTGCTGCGGCG+AGG | - | chr3.1:65446769-65446788 | None:intergenic | 85.0% |
| ! | CGGCGGCTGCTGCGGCGAGG+GGG | - | chr3.1:65446766-65446785 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 65446583 | 65451400 | 65446583 | ID=MS.gene79892 |
| chr3.1 | mRNA | 65446583 | 65451400 | 65446583 | ID=MS.gene79892.t1;Parent=MS.gene79892 |
| chr3.1 | exon | 65446583 | 65446850 | 65446583 | ID=MS.gene79892.t1.exon1;Parent=MS.gene79892.t1 |
| chr3.1 | CDS | 65446583 | 65446850 | 65446583 | ID=cds.MS.gene79892.t1;Parent=MS.gene79892.t1 |
| chr3.1 | exon | 65447506 | 65447685 | 65447506 | ID=MS.gene79892.t1.exon2;Parent=MS.gene79892.t1 |
| chr3.1 | CDS | 65447506 | 65447685 | 65447506 | ID=cds.MS.gene79892.t1;Parent=MS.gene79892.t1 |
| chr3.1 | exon | 65448679 | 65448809 | 65448679 | ID=MS.gene79892.t1.exon3;Parent=MS.gene79892.t1 |
| chr3.1 | CDS | 65448679 | 65448809 | 65448679 | ID=cds.MS.gene79892.t1;Parent=MS.gene79892.t1 |
| chr3.1 | exon | 65448932 | 65449093 | 65448932 | ID=MS.gene79892.t1.exon4;Parent=MS.gene79892.t1 |
| chr3.1 | CDS | 65448932 | 65449093 | 65448932 | ID=cds.MS.gene79892.t1;Parent=MS.gene79892.t1 |
| chr3.1 | exon | 65450535 | 65450645 | 65450535 | ID=MS.gene79892.t1.exon5;Parent=MS.gene79892.t1 |
| chr3.1 | CDS | 65450535 | 65450645 | 65450535 | ID=cds.MS.gene79892.t1;Parent=MS.gene79892.t1 |
| chr3.1 | exon | 65451326 | 65451400 | 65451326 | ID=MS.gene79892.t1.exon6;Parent=MS.gene79892.t1 |
| chr3.1 | CDS | 65451326 | 65451400 | 65451326 | ID=cds.MS.gene79892.t1;Parent=MS.gene79892.t1 |
| Gene Sequence |
| Protein sequence |
